Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0271850 | KEH36454.1 | 92.289 | 817 | 47 | 3 | 4 | 804 | 175 | 991 | 0.0 | 1456 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0271850 | sp|Q8L7S0|ULP2B_ARATH | 48.517 | 472 | 194 | 6 | 100 | 563 | 282 | 712 | 1.41e-130 | 415 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0271850 | A0A072V377 | 92.289 | 817 | 47 | 3 | 4 | 804 | 175 | 991 | 0.0 | 1456 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0190070 | Msa0271850 | 0.833875 | 4.147516e-56 | -8.615850e-47 |
Msa0271850 | Msa0310820 | 0.971351 | 5.003984e-133 | -8.615850e-47 |
Msa0271850 | Msa1190400 | 0.804014 | 2.646869e-49 | -8.615850e-47 |
Msa0271850 | Msa1360060 | 0.810229 | 1.278896e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0271850 | MtrunA17_Chr2g0279601 | 89.519 | 811 | 47 | 3 | 4 | 804 | 175 | 957 | 0.0 | 1388 |
Msa0271850 | MtrunA17_Chr3g0132991 | 49.330 | 448 | 189 | 5 | 49 | 494 | 225 | 636 | 9.91e-122 | 390 |
Msa0271850 | MtrunA17_Chr5g0427421 | 54.198 | 131 | 59 | 1 | 365 | 494 | 6 | 136 | 7.46e-40 | 152 |
Msa0271850 | MtrunA17_Chr8g0365341 | 36.604 | 265 | 142 | 10 | 242 | 495 | 299 | 548 | 3.47e-39 | 155 |
Msa0271850 | MtrunA17_Chr5g0427691 | 50.549 | 91 | 44 | 1 | 380 | 469 | 1 | 91 | 3.62e-26 | 103 |
Msa0271850 | MtrunA17_Chr2g0295891 | 27.103 | 214 | 122 | 9 | 249 | 456 | 257 | 442 | 1.02e-15 | 80.9 |
Msa0271850 | MtrunA17_Chr3g0116361 | 26.214 | 206 | 125 | 6 | 269 | 472 | 91 | 271 | 3.20e-15 | 77.0 |
Msa0271850 | MtrunA17_Chr4g0067411 | 27.103 | 214 | 122 | 6 | 249 | 456 | 284 | 469 | 4.83e-15 | 78.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0271850 | AT1G09730.2 | 48.517 | 472 | 194 | 6 | 100 | 563 | 282 | 712 | 1.44e-131 | 415 |
Msa0271850 | AT1G09730.1 | 48.517 | 472 | 194 | 6 | 100 | 563 | 314 | 744 | 6.30e-131 | 414 |
Msa0271850 | AT4G33620.1 | 44.783 | 460 | 210 | 9 | 53 | 509 | 140 | 558 | 4.28e-113 | 362 |
Msa0271850 | AT1G10570.3 | 32.963 | 270 | 151 | 8 | 241 | 496 | 184 | 437 | 2.94e-37 | 145 |
Msa0271850 | AT1G10570.2 | 32.963 | 270 | 151 | 8 | 241 | 496 | 314 | 567 | 1.30e-36 | 146 |
Msa0271850 | AT1G10570.1 | 32.963 | 270 | 151 | 8 | 241 | 496 | 315 | 568 | 1.37e-36 | 146 |
Msa0271850 | AT1G60220.1 | 32.584 | 267 | 146 | 10 | 241 | 492 | 330 | 577 | 2.78e-35 | 142 |
Msa0271850 | AT4G15880.1 | 30.693 | 202 | 103 | 9 | 253 | 447 | 288 | 459 | 5.92e-19 | 91.3 |
Msa0271850 | AT4G00690.1 | 27.962 | 211 | 116 | 8 | 253 | 456 | 139 | 320 | 1.96e-15 | 79.0 |
Msa0271850 | AT3G48480.1 | 27.891 | 147 | 81 | 4 | 332 | 472 | 152 | 279 | 2.51e-11 | 65.9 |
Find 181 sgRNAs with CRISPR-Local
Find 787 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCCATCAGAAGCACTTTC+TGG | 0.114653 | 2_3:-3367714 | None:intergenic |
GAAAATTAAATGTTAATATT+TGG | 0.132181 | 2_3:+3374249 | Msa0271850:three_prime_UTR |
TTGTTGGGCCTTCGAGTTTC+AGG | 0.182999 | 2_3:-3364580 | None:intergenic |
TTGACCAAACGATTGGTATT+TGG | 0.221463 | 2_3:+3374601 | Msa0271850:three_prime_UTR |
TATGAAGTCACTCACAAATT+TGG | 0.234747 | 2_3:-3371684 | None:intergenic |
ATTTATGATATATTTGAAAA+TGG | 0.239780 | 2_3:+3372401 | Msa0271850:CDS |
TCTTGAATCCAATTTGAATA+TGG | 0.260245 | 2_3:-3373733 | None:intergenic |
TTCCATGACTCATCAAATAT+TGG | 0.263577 | 2_3:+3374014 | Msa0271850:CDS |
AAATTCTCAAGCAGGCATTT+TGG | 0.280300 | 2_3:+3373606 | Msa0271850:CDS |
AGGGCATTCCATATTCAAAT+TGG | 0.291431 | 2_3:+3373725 | Msa0271850:CDS |
GACTCATCAAATATTGGATT+TGG | 0.292599 | 2_3:+3374020 | Msa0271850:CDS |
TGCTATCTTGTTTGGAAAGT+TGG | 0.297784 | 2_3:-3373794 | None:intergenic |
GAACATGATGCAGCTCTTAC+AGG | 0.300784 | 2_3:-3372602 | None:intergenic |
TACAATATCGAATTTCGTTT+TGG | 0.304447 | 2_3:-3374534 | None:intergenic |
TCCTCAAGTGCTATCTTGTT+TGG | 0.308354 | 2_3:-3373802 | None:intergenic |
AGCATTGATGCAAATAATTA+TGG | 0.312563 | 2_3:+3366421 | Msa0271850:intron |
GCAGCAGCAGAAAATGTTAC+TGG | 0.319749 | 2_3:+3374227 | Msa0271850:three_prime_UTR |
TTCCCAGTTGATTGTTTGTT+GGG | 0.322553 | 2_3:-3364595 | None:intergenic |
AAGTATGAGCAGTAGATTAA+AGG | 0.325256 | 2_3:+3374309 | Msa0271850:three_prime_UTR |
TTATGGAAATAATTCTATAC+TGG | 0.326005 | 2_3:+3366438 | Msa0271850:CDS |
ACAGATTCTACAAAATTCAT+AGG | 0.330939 | 2_3:-3373700 | None:intergenic |
AGGCTCTTACCTGTAGTTTA+CGG | 0.333266 | 2_3:-3367808 | None:intergenic |
CTCAGGAACGGAATGATAAA+AGG | 0.338827 | 2_3:+3374106 | Msa0271850:CDS |
TCATGGAATTTATATTATCT+TGG | 0.339243 | 2_3:-3373999 | None:intergenic |
ATTCTCAGTTGAATAGTAAC+TGG | 0.340242 | 2_3:+3372330 | Msa0271850:intron |
AATGTTTAAAATACCTCTAT+TGG | 0.341577 | 2_3:-3372728 | None:intergenic |
AGAAGAGGCTATCAAATTAT+TGG | 0.352308 | 2_3:+3365418 | Msa0271850:CDS |
AAGAATTTCGAATTTCCTAT+AGG | 0.357970 | 2_3:-3374503 | None:intergenic |
CTTTGCCACGGCAATCAATA+GGG | 0.358402 | 2_3:-3372439 | None:intergenic |
GGTCCTCTCTCTGAACTTCC+TGG | 0.359004 | 2_3:+3372461 | Msa0271850:CDS |
TTGATCGTCATTTGTCATCC+TGG | 0.361190 | 2_3:+3367922 | Msa0271850:CDS |
GTGAACAAACTTATATATAT+CGG | 0.362927 | 2_3:+3374623 | Msa0271850:three_prime_UTR |
CCTTTGCCACGGCAATCAAT+AGG | 0.368881 | 2_3:-3372440 | None:intergenic |
TTTGATTCTTCAAAATTTGA+AGG | 0.373735 | 2_3:+3363488 | Msa0271850:CDS |
TTGCTGTTTATGATTCATAT+TGG | 0.379380 | 2_3:+3365387 | Msa0271850:CDS |
TTGAAAGGGTTAAATTTGAT+AGG | 0.386075 | 2_3:-3371647 | None:intergenic |
ATATGAGATACCCAAGTATC+TGG | 0.387912 | 2_3:+3365441 | Msa0271850:CDS |
TGCCATCAGAAGCACTTTCT+GGG | 0.388664 | 2_3:-3367713 | None:intergenic |
GGCTCTTACCTGTAGTTTAC+GGG | 0.390132 | 2_3:-3367807 | None:intergenic |
TACCTCCACATTTCGATTGT+CGG | 0.398530 | 2_3:+3372669 | Msa0271850:CDS |
TTTCCCAGTTGATTGTTTGT+TGG | 0.401321 | 2_3:-3364596 | None:intergenic |
TTCACCAAATACCAATCGTT+TGG | 0.401847 | 2_3:-3374605 | None:intergenic |
AGGCCCAACAAACAATCAAC+TGG | 0.403968 | 2_3:+3364592 | Msa0271850:CDS |
CTGCAGATGCGAGGCAGCTC+AGG | 0.407387 | 2_3:-3374380 | None:intergenic |
AAAACTGTACTCCAGATACT+TGG | 0.410591 | 2_3:-3365452 | None:intergenic |
ATGCAGGAAACGGAAGAGTT+TGG | 0.411650 | 2_3:+3373553 | Msa0271850:intron |
ACCTTTATGACTTCCTTTCA+AGG | 0.411754 | 2_3:-3368091 | None:intergenic |
CAGAAGCTTACGAGTGAAAC+AGG | 0.411977 | 2_3:+3374129 | Msa0271850:CDS |
TTCCCCGTATGAATAAAATC+AGG | 0.423626 | 2_3:-3364517 | None:intergenic |
AAGTCCTTGAAAACAATTCC+AGG | 0.427711 | 2_3:-3372632 | None:intergenic |
GCAGCTCTTACAGGTGAAAC+AGG | 0.431171 | 2_3:-3372593 | None:intergenic |
CGATGAAGTTTCTAAATCAA+TGG | 0.432849 | 2_3:+3373576 | Msa0271850:CDS |
TGATCGTCATTTGTCATCCT+GGG | 0.436644 | 2_3:+3367923 | Msa0271850:CDS |
TCCTTGAAAGGAAGTCATAA+AGG | 0.440059 | 2_3:+3368090 | Msa0271850:CDS |
CTGAGCTGCCTCGCATCTGC+AGG | 0.441011 | 2_3:+3374381 | Msa0271850:three_prime_UTR |
ATCTTGATGGCAGTCTTCAC+TGG | 0.442154 | 2_3:+3367896 | Msa0271850:intron |
TTTATGATTCATATTGGTCC+AGG | 0.448556 | 2_3:+3365393 | Msa0271850:CDS |
GTTGAGAATGATAGTTTAGC+TGG | 0.449671 | 2_3:+3374057 | Msa0271850:CDS |
TGGATTCTTGTCACCAATAG+AGG | 0.452739 | 2_3:+3372715 | Msa0271850:CDS |
GCTGATATTATTTACAAAAG+TGG | 0.455963 | 2_3:-3364833 | None:intergenic |
CGATATTGTATCACCAGAAT+GGG | 0.456623 | 2_3:+3374547 | Msa0271850:three_prime_UTR |
GTGCAAGATGCAAGGTACTT+TGG | 0.458454 | 2_3:-3368061 | None:intergenic |
CTCCTTGTGAGTCGTCGACC+TGG | 0.461118 | 2_3:-3374156 | None:intergenic |
GAGAACTTTGTTATCTTGAA+AGG | 0.462874 | 2_3:-3371662 | None:intergenic |
TGTTGGGCCTTCGAGTTTCA+GGG | 0.465328 | 2_3:-3364579 | None:intergenic |
ATTTATATTATCTTGGAAAG+AGG | 0.466242 | 2_3:-3373992 | None:intergenic |
TCGAGAATATTAACGAGAAC+TGG | 0.466957 | 2_3:-3364550 | None:intergenic |
CTGAAGGATGGCACCTCCCC+AGG | 0.467071 | 2_3:-3367940 | None:intergenic |
ACCACCGGCATCTGAATCTC+AGG | 0.470311 | 2_3:+3374089 | Msa0271850:CDS |
TTCCCATCCACATCATATAT+AGG | 0.471391 | 2_3:+3373637 | Msa0271850:CDS |
CGAATCATGCTGGTTTGAAA+AGG | 0.471482 | 2_3:+3364660 | Msa0271850:CDS |
GAATAGTAACTGGTTCCCTT+CGG | 0.472520 | 2_3:+3372340 | Msa0271850:CDS |
TAATATATCCAGTGTCCTAT+AGG | 0.474546 | 2_3:+3374488 | Msa0271850:three_prime_UTR |
GTGTCATTGACGAATGTCTC+TGG | 0.479746 | 2_3:-3367282 | None:intergenic |
TTCTCTTGAAGATCAGCCTC+TGG | 0.480101 | 2_3:+3373756 | Msa0271850:CDS |
TTTGATAGCCTCTTCTGCCC+TGG | 0.481471 | 2_3:-3365411 | None:intergenic |
TCGATATTGTATCACCAGAA+TGG | 0.482992 | 2_3:+3374546 | Msa0271850:three_prime_UTR |
TCTGGAGCTAGCTGTTACCC+TGG | 0.484277 | 2_3:+3372515 | Msa0271850:CDS |
AGAACTTTGTTATCTTGAAA+GGG | 0.486417 | 2_3:-3371661 | None:intergenic |
CTTGTAAGCAAATCAAGGAT+AGG | 0.486610 | 2_3:-3364889 | None:intergenic |
ACAGCTACCTGCGTGAAGAA+TGG | 0.490151 | 2_3:+3371394 | Msa0271850:intron |
GCATCATGTTCAAGAGATCC+TGG | 0.491769 | 2_3:+3372614 | Msa0271850:CDS |
AGATTCCCATGCCACATACC+AGG | 0.494855 | 2_3:-3372533 | None:intergenic |
GAAAGATATCTTACCTCTGA+AGG | 0.503082 | 2_3:-3367956 | None:intergenic |
ATCCAATATTTGATGAGTCA+TGG | 0.505597 | 2_3:-3374016 | None:intergenic |
CAAGATTCTCAAGAGTCAAA+TGG | 0.507090 | 2_3:+3373844 | Msa0271850:CDS |
ACGAGTGAAACAGGTGGTCC+AGG | 0.507238 | 2_3:+3374138 | Msa0271850:CDS |
CGTTCCTGAGATTCAGATGC+CGG | 0.507454 | 2_3:-3374093 | None:intergenic |
TAAACTGCCCACTGATGAGC+AGG | 0.510484 | 2_3:+3367632 | Msa0271850:CDS |
TCTTGATTCCCGTAAACTAC+AGG | 0.511836 | 2_3:+3367799 | Msa0271850:CDS |
GAGGAGGTTATTTATCCAAA+GGG | 0.512036 | 2_3:+3367210 | Msa0271850:CDS |
CTCAGAGAAGCCTCGTCCGA+AGG | 0.513055 | 2_3:-3372356 | None:intergenic |
AAATAATTCTATACTGGGAC+AGG | 0.515194 | 2_3:+3366444 | Msa0271850:CDS |
TTGTAAGCAAATCAAGGATA+GGG | 0.518441 | 2_3:-3364888 | None:intergenic |
AGCATCAGAAACAACACAGC+AGG | 0.520543 | 2_3:+3373672 | Msa0271850:CDS |
TTACCTATATATGATGTGGA+TGG | 0.523036 | 2_3:-3373640 | None:intergenic |
TTGCTAATAGAAACAGCATC+AGG | 0.528069 | 2_3:-3367237 | None:intergenic |
AAAACTATAAGCTCAAACAT+TGG | 0.528377 | 2_3:-3374679 | None:intergenic |
TGGCATGGGAATCTTTCAAA+TGG | 0.532284 | 2_3:+3372542 | Msa0271850:CDS |
CCTATTGATTGCCGTGGCAA+AGG | 0.532836 | 2_3:+3372440 | Msa0271850:CDS |
TTGCACATGGACTCCTTGAA+AGG | 0.537585 | 2_3:+3368078 | Msa0271850:CDS |
TGAGGAGGTTATTTATCCAA+AGG | 0.538304 | 2_3:+3367209 | Msa0271850:CDS |
CTCTTGAGAATCTTGAACAA+CGG | 0.540408 | 2_3:-3373836 | None:intergenic |
TGTCACTTGTAAGCAAATCA+AGG | 0.543347 | 2_3:-3364894 | None:intergenic |
TCGAATTTCCTATAGGACAC+TGG | 0.547082 | 2_3:-3374496 | None:intergenic |
CAGATTCTACAAAATTCATA+GGG | 0.554388 | 2_3:-3373699 | None:intergenic |
TACCTATATATGATGTGGAT+GGG | 0.555681 | 2_3:-3373639 | None:intergenic |
TAACTGGTTCCCTTCGGACG+AGG | 0.559370 | 2_3:+3372346 | Msa0271850:CDS |
GAGAGAGCAAATTCTCAAGC+AGG | 0.559953 | 2_3:+3373598 | Msa0271850:CDS |
CAGCAGAATCATCCTCCACT+AGG | 0.561077 | 2_3:-3363635 | None:intergenic |
GTTACCCTGGTATGTGGCAT+GGG | 0.570038 | 2_3:+3372528 | Msa0271850:CDS |
TTTACAAAAGTGGTCACACC+TGG | 0.570272 | 2_3:-3364823 | None:intergenic |
GTCTGTAGATTAAAACAGCA+TGG | 0.570465 | 2_3:+3364743 | Msa0271850:intron |
CAAGATTCTCAAGAGTCAAA+CGG | 0.570479 | 2_3:+3373889 | Msa0271850:CDS |
TCCAAACAAGATAGCACTTG+AGG | 0.571937 | 2_3:+3373801 | Msa0271850:CDS |
TGTGCAGGATGACAACGAAA+AGG | 0.574307 | 2_3:+3364480 | Msa0271850:intron |
ATATTGGTCCAGGGCAGAAG+AGG | 0.574841 | 2_3:+3365403 | Msa0271850:CDS |
CTAGCTGTTACCCTGGTATG+TGG | 0.575747 | 2_3:+3372522 | Msa0271850:CDS |
TGCCCACTGATGAGCAGGAG+AGG | 0.576377 | 2_3:+3367637 | Msa0271850:CDS |
TGTTACCCTGGTATGTGGCA+TGG | 0.579265 | 2_3:+3372527 | Msa0271850:CDS |
AGCTGGCAAGAGAGAACCAC+CGG | 0.579547 | 2_3:+3374074 | Msa0271850:CDS |
CTCTTACAGGTGAAACAGGT+CGG | 0.580454 | 2_3:-3372589 | None:intergenic |
TCAGAGAAGCCTCGTCCGAA+GGG | 0.581464 | 2_3:-3372355 | None:intergenic |
TATGGAAATAATTCTATACT+GGG | 0.581868 | 2_3:+3366439 | Msa0271850:CDS |
AACCTCTCCTGCTCATCAGT+GGG | 0.582816 | 2_3:-3367639 | None:intergenic |
AAACCTCTCCTGCTCATCAG+TGG | 0.585066 | 2_3:-3367640 | None:intergenic |
GAAAGAGAGACACCCCAATA+CGG | 0.590043 | 2_3:+3371416 | Msa0271850:CDS |
ATCTTTACCTATATATGATG+TGG | 0.590521 | 2_3:-3373644 | None:intergenic |
GATCGTCATTTGTCATCCTG+GGG | 0.592090 | 2_3:+3367924 | Msa0271850:CDS |
AAACTGTACTCCAGATACTT+GGG | 0.592433 | 2_3:-3365451 | None:intergenic |
AGCAGCTCCCTGAAACTCGA+AGG | 0.593760 | 2_3:+3364572 | Msa0271850:CDS |
AAAGTGGAAGCAGATTCCTC+TGG | 0.594486 | 2_3:+3372497 | Msa0271850:intron |
AGTACCTTGCATCTTGCACA+TGG | 0.599395 | 2_3:+3368065 | Msa0271850:CDS |
TCCCCGTATGAATAAAATCA+GGG | 0.600336 | 2_3:-3364516 | None:intergenic |
TTTGGTGGGACTAGAAAGGT+AGG | 0.601457 | 2_3:+3374444 | Msa0271850:three_prime_UTR |
AACGCGTGCGTAAATGGACC+AGG | 0.605488 | 2_3:+3367748 | Msa0271850:CDS |
ACAAATCAAGGGCCACATGT+TGG | 0.606148 | 2_3:-3374334 | None:intergenic |
TTTGCCACGGCAATCAATAG+GGG | 0.609438 | 2_3:-3372438 | None:intergenic |
GACCCAGAAAGTGCTTCTGA+TGG | 0.613087 | 2_3:+3367711 | Msa0271850:CDS |
GAGTCCATGTGCAAGATGCA+AGG | 0.613149 | 2_3:-3368069 | None:intergenic |
CAGAGAGAGGACCTTTGCCA+CGG | 0.614951 | 2_3:-3372451 | None:intergenic |
ATGTCGTTGTGTCATCAAAG+TGG | 0.614988 | 2_3:+3372695 | Msa0271850:CDS |
TATATTAACACAAGTTTCAG+CGG | 0.615900 | 2_3:-3374472 | None:intergenic |
AGAATATTAACGAGAACTGG+TGG | 0.617602 | 2_3:-3364547 | None:intergenic |
TTATGATTCATATTGGTCCA+GGG | 0.618488 | 2_3:+3365394 | Msa0271850:CDS |
GATATCTTACCTCTGAAGGA+TGG | 0.618961 | 2_3:-3367952 | None:intergenic |
AGGGTAACAGCTAGCTCCAG+AGG | 0.623506 | 2_3:-3372513 | None:intergenic |
ATTCTCAAGAGTCAAATGGT+AGG | 0.623922 | 2_3:+3373848 | Msa0271850:CDS |
GGGGAGGTGCCATCCTTCAG+AGG | 0.623961 | 2_3:+3367943 | Msa0271850:CDS |
TCCTGAGATTCAGATGCCGG+TGG | 0.625010 | 2_3:-3374090 | None:intergenic |
CTTTGAAGATCACCTAGTGG+AGG | 0.626197 | 2_3:+3363623 | Msa0271850:CDS |
ACACCAGGAAGTTCAGAGAG+AGG | 0.629359 | 2_3:-3372464 | None:intergenic |
CGGCATCTGAATCTCAGGAA+CGG | 0.631378 | 2_3:+3374094 | Msa0271850:CDS |
ATCTGCCGACAATCGAAATG+TGG | 0.633342 | 2_3:-3372674 | None:intergenic |
GGAGGTTATTTATCCAAAGG+GGG | 0.634594 | 2_3:+3367212 | Msa0271850:CDS |
GTCCAGGTCGACGACTCACA+AGG | 0.635402 | 2_3:+3374154 | Msa0271850:CDS |
CGTCATTTGTCATCCTGGGG+AGG | 0.637228 | 2_3:+3367927 | Msa0271850:CDS |
GCATCAGAAACAACACAGCA+GGG | 0.638056 | 2_3:+3373673 | Msa0271850:CDS |
TTGTACATCCTGCAGATGCG+AGG | 0.638198 | 2_3:-3374389 | None:intergenic |
TAACTCTGAACTGAAGACTC+AGG | 0.638259 | 2_3:+3374278 | Msa0271850:three_prime_UTR |
GATTCCCATGCCACATACCA+GGG | 0.638600 | 2_3:-3372532 | None:intergenic |
GGCCCAACAAACAATCAACT+GGG | 0.640711 | 2_3:+3364593 | Msa0271850:CDS |
GCTAAATTATTCACATGACA+TGG | 0.644535 | 2_3:-3374206 | None:intergenic |
TCTCTTTCCATTCTTCACGC+AGG | 0.644979 | 2_3:-3371401 | None:intergenic |
AGGAGGTTATTTATCCAAAG+GGG | 0.645044 | 2_3:+3367211 | Msa0271850:CDS |
TTGCTTTGAAGATCACCTAG+TGG | 0.647391 | 2_3:+3363620 | Msa0271850:CDS |
TGCCGACAATCGAAATGTGG+AGG | 0.651848 | 2_3:-3372671 | None:intergenic |
TCAAAAGATTCAGAAGACGT+TGG | 0.652868 | 2_3:+3364784 | Msa0271850:CDS |
GTTGCGGTTCATCTCACTAG+AGG | 0.657123 | 2_3:+3371467 | Msa0271850:CDS |
ATTCTCAAGAGTCAAACGGT+GGG | 0.659694 | 2_3:+3373893 | Msa0271850:CDS |
AGATTAAAGGTACCAACATG+TGG | 0.662119 | 2_3:+3374322 | Msa0271850:three_prime_UTR |
GATTCTCAAGAGTCAAACGG+TGG | 0.665061 | 2_3:+3373892 | Msa0271850:CDS |
GCGTTCTGATGATGATGATG+AGG | 0.666555 | 2_3:+3363418 | Msa0271850:CDS |
AGGACAGTTTGTTCTCTCAG+AGG | 0.668948 | 2_3:+3366464 | Msa0271850:CDS |
AGAGTCAAATGATGTGCATG+AGG | 0.690696 | 2_3:+3373945 | Msa0271850:CDS |
TTGCCACGGCAATCAATAGG+GGG | 0.696682 | 2_3:-3372437 | None:intergenic |
AGAGAGACACCCCAATACGG+CGG | 0.716781 | 2_3:+3371419 | Msa0271850:CDS |
GCAGGATGACAACGAAAAGG+TGG | 0.722308 | 2_3:+3364483 | Msa0271850:intron |
TGATGATGATGAGGACGATG+AGG | 0.723969 | 2_3:+3363427 | Msa0271850:CDS |
CAGGTCGACGACTCACAAGG+AGG | 0.733811 | 2_3:+3374157 | Msa0271850:CDS |
AAGCTTACGAGTGAAACAGG+TGG | 0.759486 | 2_3:+3374132 | Msa0271850:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATATAT+AGG | + | chr2_3:3368328-3368347 | Msa0271850:intron | 0.0% |
!! | TATATATATATATATATATA+GGG | + | chr2_3:3368329-3368348 | Msa0271850:intron | 0.0% |
!! | TATATATATATATATATATA+GGG | - | chr2_3:3368329-3368348 | None:intergenic | 0.0% |
!! | ATATATATATATATATATAT+AGG | - | chr2_3:3368328-3368347 | None:intergenic | 0.0% |
!! | ATATATATATATATATATAT+GGG | - | chr2_3:3368328-3368347 | None:intergenic | 0.0% |
!! | TATATATATATATATATATA+TGG | - | chr2_3:3368329-3368348 | None:intergenic | 0.0% |
!!! | ATATATGTTTTTTCTTTTTT+TGG | + | chr2_3:3364181-3364200 | Msa0271850:intron | 10.0% |
!! | AATTTAAAAATAAGTGAATA+AGG | - | chr2_3:3365249-3365268 | None:intergenic | 10.0% |
!!! | ATTCACTTATTTTTAAATTT+AGG | + | chr2_3:3365250-3365269 | Msa0271850:intron | 10.0% |
!! | CAAAAAAAATTAACATAATA+AGG | - | chr2_3:3366613-3366632 | None:intergenic | 10.0% |
!!! | TTGTTATTTTATGATTTATT+TGG | + | chr2_3:3367986-3368005 | Msa0271850:intron | 10.0% |
!! | TATATATATATATATATAGG+GGG | - | chr2_3:3368419-3368438 | None:intergenic | 10.0% |
!! | ATAAATATTTGTGTATAATT+TGG | + | chr2_3:3370066-3370085 | Msa0271850:intron | 10.0% |
!! | TAAATATTTGTGTATAATTT+GGG | + | chr2_3:3370067-3370086 | Msa0271850:intron | 10.0% |
!! | ATATATATATATATATATGG+GGG | - | chr2_3:3370594-3370613 | None:intergenic | 10.0% |
!! | ATTTATGATATATTTGAAAA+TGG | + | chr2_3:3372401-3372420 | Msa0271850:CDS | 10.0% |
!! | AAAAAATAAAATGAAATTGT+TGG | + | chr2_3:3373189-3373208 | Msa0271850:intron | 10.0% |
!! | AAAAATAAAATGAAATTGTT+GGG | + | chr2_3:3373190-3373209 | Msa0271850:intron | 10.0% |
!! | GAAAATTAAATGTTAATATT+TGG | + | chr2_3:3374249-3374268 | Msa0271850:three_prime_UTR | 10.0% |
!! | TAAAGAAAAAGAGATATATA+AGG | - | chr2_3:3363800-3363819 | None:intergenic | 15.0% |
!!! | TTATATATCTCTTTTTCTTT+AGG | + | chr2_3:3363799-3363818 | Msa0271850:intron | 15.0% |
!!! | TATATATCTCTTTTTCTTTA+GGG | + | chr2_3:3363800-3363819 | Msa0271850:intron | 15.0% |
!! | TATCAAAAAACACAATTAAA+AGG | - | chr2_3:3365035-3365054 | None:intergenic | 15.0% |
!!! | AATTTTATTGTTTAAAACAC+CGG | + | chr2_3:3365483-3365502 | Msa0271850:intron | 15.0% |
!! | AAATTCATATTTGATTCAAT+AGG | + | chr2_3:3365653-3365672 | Msa0271850:intron | 15.0% |
!! | AATTCATATTTGATTCAATA+GGG | + | chr2_3:3365654-3365673 | Msa0271850:intron | 15.0% |
!! | ATGTATTTAAGAAATATCAA+TGG | - | chr2_3:3365942-3365961 | None:intergenic | 15.0% |
!!! | TATAATTTTGAGTCTATAAA+TGG | - | chr2_3:3366241-3366260 | None:intergenic | 15.0% |
!!! | TTTTTTTTGTTTTTTGCATA+TGG | + | chr2_3:3366624-3366643 | Msa0271850:intron | 15.0% |
!! | AAGTTGCAAAAAAAATAATA+TGG | - | chr2_3:3366757-3366776 | None:intergenic | 15.0% |
!!! | TTATTTTTTTTGCAACTTTT+AGG | + | chr2_3:3366759-3366778 | Msa0271850:intron | 15.0% |
!!! | TATTTTTTTTGCAACTTTTA+GGG | + | chr2_3:3366760-3366779 | Msa0271850:intron | 15.0% |
!! | AAAAAACACAAAAGTTAAAA+GGG | - | chr2_3:3367068-3367087 | None:intergenic | 15.0% |
!! | TAAAAAACACAAAAGTTAAA+AGG | - | chr2_3:3367069-3367088 | None:intergenic | 15.0% |
!! | TAATTATTTATGTATCTTGA+TGG | + | chr2_3:3367883-3367902 | Msa0271850:intron | 15.0% |
!! | AAATCAAATAAAATGAAGAT+CGG | - | chr2_3:3368012-3368031 | None:intergenic | 15.0% |
!!! | TTTTATAGCTTATGATAATT+CGG | + | chr2_3:3368176-3368195 | Msa0271850:intron | 15.0% |
!! | AATCTGAAGAAAATAAAAAA+GGG | - | chr2_3:3368226-3368245 | None:intergenic | 15.0% |
!! | AAATCTGAAGAAAATAAAAA+AGG | - | chr2_3:3368227-3368246 | None:intergenic | 15.0% |
!! | TTGAAAGATTGTTTATATAA+GGG | - | chr2_3:3368899-3368918 | None:intergenic | 15.0% |
!! | ATTGAAAGATTGTTTATATA+AGG | - | chr2_3:3368900-3368919 | None:intergenic | 15.0% |
!!! | GAAAGATATTATATATTTTC+TGG | - | chr2_3:3369751-3369770 | None:intergenic | 15.0% |
!! | ATAATATCTTTCAAAATTCT+TGG | + | chr2_3:3369759-3369778 | Msa0271850:intron | 15.0% |
!! | CCTATATATATATATATAGA+GGG | - | chr2_3:3370337-3370356 | None:intergenic | 15.0% |
!! | CCTCTATATATATATATATA+GGG | + | chr2_3:3370335-3370354 | Msa0271850:intron | 15.0% |
!! | CTCTATATATATATATATAG+GGG | + | chr2_3:3370336-3370355 | Msa0271850:intron | 15.0% |
!! | TCTATATATATATATATAGG+GGG | + | chr2_3:3370337-3370356 | Msa0271850:intron | 15.0% |
!! | TGTTTATAATAGAAAAACAT+GGG | - | chr2_3:3370438-3370457 | None:intergenic | 15.0% |
!! | TTGTTTATAATAGAAAAACA+TGG | - | chr2_3:3370439-3370458 | None:intergenic | 15.0% |
!!! | AAAATAATTTTCCAACTAAA+TGG | - | chr2_3:3370767-3370786 | None:intergenic | 15.0% |
!!! | AATTATAAAATTTTAGTACG+AGG | + | chr2_3:3371875-3371894 | Msa0271850:intron | 15.0% |
!! | AAGTAAATTAATTGCTTATA+CGG | - | chr2_3:3372036-3372055 | None:intergenic | 15.0% |
!! | TTTGATTCTTCAAAATTTGA+AGG | + | chr2_3:3363488-3363507 | Msa0271850:CDS | 20.0% |
!! | ATATGCAGAATTCTTATTAT+CGG | + | chr2_3:3363523-3363542 | Msa0271850:intron | 20.0% |
!!! | ATATATCTCTTTTTCTTTAG+GGG | + | chr2_3:3363801-3363820 | Msa0271850:intron | 20.0% |
!! | AAATCAAAGAAAATGTTAAC+AGG | + | chr2_3:3363830-3363849 | Msa0271850:intron | 20.0% |
!!! | CAACTAAAATTTAGTTTTTC+AGG | - | chr2_3:3364276-3364295 | None:intergenic | 20.0% |
!!! | TTTTTAATGTTAGATATCTC+TGG | + | chr2_3:3364431-3364450 | Msa0271850:intron | 20.0% |
!!! | GAAAACTTTTAAAATTGAGT+GGG | + | chr2_3:3364615-3364634 | Msa0271850:CDS | 20.0% |
!!! | ATCTTTTTATGTGTCATTAT+GGG | + | chr2_3:3364857-3364876 | Msa0271850:CDS | 20.0% |
!!! | ATTTTATTGTTTAAAACACC+GGG | + | chr2_3:3365484-3365503 | Msa0271850:intron | 20.0% |
!!! | TTTTCCATTTTGAAGTATTA+GGG | - | chr2_3:3365826-3365845 | None:intergenic | 20.0% |
!! | GAAAGAACTAAAACAATTAT+TGG | - | chr2_3:3365908-3365927 | None:intergenic | 20.0% |
!! | GAAAGAATATATTCTGATAT+AGG | + | chr2_3:3366285-3366304 | Msa0271850:intron | 20.0% |
!! | TTATGGAAATAATTCTATAC+TGG | + | chr2_3:3366438-3366457 | Msa0271850:CDS | 20.0% |
!! | TATGGAAATAATTCTATACT+GGG | + | chr2_3:3366439-3366458 | Msa0271850:CDS | 20.0% |
!!! | ATGGTCTTTTATATATGTAT+GGG | - | chr2_3:3366917-3366936 | None:intergenic | 20.0% |
!!! | TAATACGCAAATTTTTTCAA+TGG | + | chr2_3:3366951-3366970 | Msa0271850:intron | 20.0% |
!!! | TTTTTAAGACTTCCTATTTT+TGG | + | chr2_3:3367083-3367102 | Msa0271850:intron | 20.0% |
!! | TTAAACAACTTTCAATCTAA+AGG | - | chr2_3:3367458-3367477 | None:intergenic | 20.0% |
!! | TATTCCATTTGAAAAGAAAA+TGG | - | chr2_3:3367521-3367540 | None:intergenic | 20.0% |
!!! | AGATATAATCCTTTTCAAAA+AGG | - | chr2_3:3367782-3367801 | None:intergenic | 20.0% |
!! | TTTATAGCTTATGATAATTC+GGG | + | chr2_3:3368177-3368196 | Msa0271850:intron | 20.0% |
!! | ATCAAAGGAGAATATTAATT+TGG | - | chr2_3:3368255-3368274 | None:intergenic | 20.0% |
!! | AAATTAATATTCTCCTTTGA+TGG | + | chr2_3:3368254-3368273 | Msa0271850:intron | 20.0% |
!!! | ATTATATATTTTCTGGAACA+AGG | - | chr2_3:3369744-3369763 | None:intergenic | 20.0% |
!! | ATTAATCAACAAATTAGCAT+GGG | - | chr2_3:3369940-3369959 | None:intergenic | 20.0% |
!! | AATTAATCAACAAATTAGCA+TGG | - | chr2_3:3369941-3369960 | None:intergenic | 20.0% |
!!! | TTTCTGTTATTTTCTTCTAT+TGG | - | chr2_3:3369977-3369996 | None:intergenic | 20.0% |
!! | AGAAGAAAATAACAGAAATT+AGG | + | chr2_3:3369979-3369998 | Msa0271850:intron | 20.0% |
!! | GAAGAAAATAACAGAAATTA+GGG | + | chr2_3:3369980-3369999 | Msa0271850:intron | 20.0% |
!! | ACACAAATATTTATAGATCT+TGG | - | chr2_3:3370060-3370079 | None:intergenic | 20.0% |
!! | CCCTCTATATATATATATAT+AGG | + | chr2_3:3370334-3370353 | Msa0271850:intron | 20.0% |
!! | CCCTATATATATATATATAG+AGG | - | chr2_3:3370338-3370357 | None:intergenic | 20.0% |
!! | TAAAGTTTAATAGAGACAAA+AGG | + | chr2_3:3370501-3370520 | Msa0271850:intron | 20.0% |
!! | AAAGTTTAATAGAGACAAAA+GGG | + | chr2_3:3370502-3370521 | Msa0271850:intron | 20.0% |
!!! | CAACTGATGATAATTTTTTT+TGG | + | chr2_3:3370668-3370687 | Msa0271850:intron | 20.0% |
!!! | ATTTTTTTTGGAAGATCTAT+AGG | + | chr2_3:3370680-3370699 | Msa0271850:intron | 20.0% |
!!! | TTTTTTTTGGAAGATCTATA+GGG | + | chr2_3:3370681-3370700 | Msa0271850:intron | 20.0% |
!!! | GAAAATTATTTTCATTCTTC+AGG | + | chr2_3:3370775-3370794 | Msa0271850:intron | 20.0% |
!!! | TCTAGTAAAATACTTTTACA+AGG | - | chr2_3:3372009-3372028 | None:intergenic | 20.0% |
!!! | AATGTTTAAAATACCTCTAT+TGG | - | chr2_3:3372731-3372750 | None:intergenic | 20.0% |
!!! | CCTTTTATGTTTTAGTAAAA+AGG | - | chr2_3:3372925-3372944 | None:intergenic | 20.0% |
!!! | CCTTTTTACTAAAACATAAA+AGG | + | chr2_3:3372922-3372941 | Msa0271850:intron | 20.0% |
!! | TTTACTAAAACATAAAAGGA+AGG | + | chr2_3:3372926-3372945 | Msa0271850:intron | 20.0% |
!! | TTACTAAAACATAAAAGGAA+GGG | + | chr2_3:3372927-3372946 | Msa0271850:intron | 20.0% |
!!! | AAATCATTTTATCAGAAGTT+AGG | - | chr2_3:3373029-3373048 | None:intergenic | 20.0% |
!! | TAACTTCTGATAAAATGATT+TGG | + | chr2_3:3373028-3373047 | Msa0271850:intron | 20.0% |
!! | CTAATTACAAACAAATGAAA+AGG | - | chr2_3:3373216-3373235 | None:intergenic | 20.0% |
!!! | CTTTTCATTTGTTTGTAATT+AGG | + | chr2_3:3373214-3373233 | Msa0271850:intron | 20.0% |
!! | TGTAATATATTATTTCACAG+AGG | + | chr2_3:3373244-3373263 | Msa0271850:intron | 20.0% |
!! | AATGCAAAAGAAAAATTCAT+AGG | + | chr2_3:3373271-3373290 | Msa0271850:intron | 20.0% |
!! | ATGCAAAAGAAAAATTCATA+GGG | + | chr2_3:3373272-3373291 | Msa0271850:intron | 20.0% |
!! | ATTTATATTATCTTGGAAAG+AGG | - | chr2_3:3373995-3374014 | None:intergenic | 20.0% |
!! | TCATGGAATTTATATTATCT+TGG | - | chr2_3:3374002-3374021 | None:intergenic | 20.0% |
!! | CAAAAAGATTTACAAATCAA+GGG | - | chr2_3:3374348-3374367 | None:intergenic | 20.0% |
!!! | TTGATAGCTCTTTTTTTTTT+GGG | + | chr2_3:3374417-3374436 | Msa0271850:three_prime_UTR | 20.0% |
!! | GTGAACAAACTTATATATAT+CGG | + | chr2_3:3374623-3374642 | Msa0271850:three_prime_UTR | 20.0% |
!!! | TTGAATTTTGTTTCAGAATC+AGG | + | chr2_3:3363385-3363404 | Msa0271850:intron | 25.0% |
! | ATTCTTATTATCGGTAATAG+TGG | + | chr2_3:3363532-3363551 | Msa0271850:intron | 25.0% |
!!! | TGGAAGATGATTTTTTATAC+TGG | + | chr2_3:3363552-3363571 | Msa0271850:intron | 25.0% |
! | GTGTATTTGTCATGTTTATA+TGG | + | chr2_3:3363673-3363692 | Msa0271850:intron | 25.0% |
! | AGAAAAAGAGATATATAAGG+CGG | - | chr2_3:3363797-3363816 | None:intergenic | 25.0% |
! | TTTCCTTCTTTCTAATGTTA+TGG | + | chr2_3:3363976-3363995 | Msa0271850:intron | 25.0% |
!! | TTTCTAATGTTATGGTCTTA+TGG | + | chr2_3:3363984-3364003 | Msa0271850:intron | 25.0% |
! | AATTAAATCAAATGACCTGA+AGG | + | chr2_3:3364097-3364116 | Msa0271850:intron | 25.0% |
! | TATATAAGAGAAACAGAACA+AGG | - | chr2_3:3364166-3364185 | None:intergenic | 25.0% |
! | AATGTAGAATGTTATATCAC+AGG | + | chr2_3:3364382-3364401 | Msa0271850:intron | 25.0% |
! | ATGTAGAATGTTATATCACA+GGG | + | chr2_3:3364383-3364402 | Msa0271850:intron | 25.0% |
!!! | GGAAAACTTTTAAAATTGAG+TGG | + | chr2_3:3364614-3364633 | Msa0271850:CDS | 25.0% |
! | TTATAAAAATCGAATCATGC+TGG | + | chr2_3:3364650-3364669 | Msa0271850:CDS | 25.0% |
! | ACGGTCAAATTTATCATTAA+GGG | - | chr2_3:3364718-3364737 | None:intergenic | 25.0% |
! | GCTGATATTATTTACAAAAG+TGG | - | chr2_3:3364836-3364855 | None:intergenic | 25.0% |
!!! | GATCTTTTTATGTGTCATTA+TGG | + | chr2_3:3364856-3364875 | Msa0271850:CDS | 25.0% |
! | GTATACTTTAATCAATTGGT+TGG | + | chr2_3:3364924-3364943 | Msa0271850:intron | 25.0% |
! | TTCTGTCATTCAAATTAACT+TGG | - | chr2_3:3364960-3364979 | None:intergenic | 25.0% |
! | AATCCTATGATTACTATCAA+GGG | - | chr2_3:3365007-3365026 | None:intergenic | 25.0% |
! | AAATCCTATGATTACTATCA+AGG | - | chr2_3:3365008-3365027 | None:intergenic | 25.0% |
! | TGATACAAATTCTTCAACTA+TGG | - | chr2_3:3365065-3365084 | None:intergenic | 25.0% |
! | TTGAAGAATTTGTATCATTG+TGG | + | chr2_3:3365068-3365087 | Msa0271850:intron | 25.0% |
! | TTTATAAGCCTCTATAGTTT+AGG | + | chr2_3:3365140-3365159 | Msa0271850:intron | 25.0% |
! | GTGAATAAGGAACAAAAAAT+AGG | - | chr2_3:3365236-3365255 | None:intergenic | 25.0% |
!!! | TTGCTGTTTATGATTCATAT+TGG | + | chr2_3:3365387-3365406 | Msa0271850:CDS | 25.0% |
! | TAAAAAAATATGTTACAGCC+CGG | - | chr2_3:3365505-3365524 | None:intergenic | 25.0% |
!!! | CTTACTGCCTAATTATTTTT+GGG | + | chr2_3:3365544-3365563 | Msa0271850:intron | 25.0% |
! | TATGCTTCCCAAAAATAATT+AGG | - | chr2_3:3365554-3365573 | None:intergenic | 25.0% |
!! | TTCATTTTCTTCATCAATGA+TGG | - | chr2_3:3365589-3365608 | None:intergenic | 25.0% |
! | AAATGAAAATCAAAGCTGAA+AGG | + | chr2_3:3365602-3365621 | Msa0271850:intron | 25.0% |
! | AATGAAAATCAAAGCTGAAA+GGG | + | chr2_3:3365603-3365622 | Msa0271850:intron | 25.0% |
! | TACAGATGTTTGTGAAAATT+TGG | - | chr2_3:3365689-3365708 | None:intergenic | 25.0% |
! | CAGAAAACATAAACCATTAA+TGG | - | chr2_3:3365752-3365771 | None:intergenic | 25.0% |
!!! | CTTTTCCATTTTGAAGTATT+AGG | - | chr2_3:3365827-3365846 | None:intergenic | 25.0% |
!! | ACTTCAAAATGGAAAAGTAT+CGG | + | chr2_3:3365830-3365849 | Msa0271850:intron | 25.0% |
! | AACAATTATTGGATACTTTC+TGG | - | chr2_3:3365897-3365916 | None:intergenic | 25.0% |
! | GCTAATTGAGATACATTTAA+GGG | - | chr2_3:3366115-3366134 | None:intergenic | 25.0% |
! | AGCTAATTGAGATACATTTA+AGG | - | chr2_3:3366116-3366135 | None:intergenic | 25.0% |
! | GTATCATATCTAGATGATAA+CGG | - | chr2_3:3366201-3366220 | None:intergenic | 25.0% |
! | AGAATATATTCTGATATAGG+TGG | + | chr2_3:3366288-3366307 | Msa0271850:intron | 25.0% |
! | GAATATATTCTGATATAGGT+GGG | + | chr2_3:3366289-3366308 | Msa0271850:intron | 25.0% |
! | AATATATTCTGATATAGGTG+GGG | + | chr2_3:3366290-3366309 | Msa0271850:intron | 25.0% |
!!! | ATAACTATGTCAACTTGTTA+TGG | + | chr2_3:3366322-3366341 | Msa0271850:intron | 25.0% |
!!! | AGCATTGATGCAAATAATTA+TGG | + | chr2_3:3366421-3366440 | Msa0271850:intron | 25.0% |
!! | GATGGTCTTTTATATATGTA+TGG | - | chr2_3:3366918-3366937 | None:intergenic | 25.0% |
! | AATGTCCAATTACCAAAAAT+AGG | - | chr2_3:3367098-3367117 | None:intergenic | 25.0% |
!! | TGGTAATTGGACATTTTTAT+CGG | + | chr2_3:3367103-3367122 | Msa0271850:intron | 25.0% |
! | TATCGAATGATAGTTGTTAA+GGG | + | chr2_3:3367131-3367150 | Msa0271850:intron | 25.0% |
!! | CTTACCATTTTCTTTTCAAA+TGG | + | chr2_3:3367514-3367533 | Msa0271850:intron | 25.0% |
!! | TATATATGCCTCTTTATTTG+AGG | + | chr2_3:3367555-3367574 | Msa0271850:intron | 25.0% |
! | ATATAAAGCCTCAAATAAAG+AGG | - | chr2_3:3367566-3367585 | None:intergenic | 25.0% |
!! | TCTTTATTTGAGGCTTTATA+TGG | + | chr2_3:3367565-3367584 | Msa0271850:intron | 25.0% |
!!! | GAAAGTTAACCTTTTTGAAA+AGG | + | chr2_3:3367770-3367789 | Msa0271850:CDS | 25.0% |
! | TTATAGCTTATGATAATTCG+GGG | + | chr2_3:3368178-3368197 | Msa0271850:intron | 25.0% |
! | ATGAGAATGATATATGAGAA+TGG | + | chr2_3:3368455-3368474 | Msa0271850:intron | 25.0% |
!! | TGAATTTGAAACATAAGATC+AGG | - | chr2_3:3368848-3368867 | None:intergenic | 25.0% |
! | TAAGAACCAGAAAAAACAAT+TGG | - | chr2_3:3369110-3369129 | None:intergenic | 25.0% |
! | TTAGAAATAAGAATGCATAC+AGG | + | chr2_3:3369221-3369240 | Msa0271850:intron | 25.0% |
! | TAGAAATAAGAATGCATACA+GGG | + | chr2_3:3369222-3369241 | Msa0271850:intron | 25.0% |
!!! | ACTTGTGTTTTCTTGTTTTT+GGG | - | chr2_3:3369278-3369297 | None:intergenic | 25.0% |
! | ATGACAATGATATATGAGAA+TGG | - | chr2_3:3369374-3369393 | None:intergenic | 25.0% |
! | AACTTAGAACTAGAAAGTTA+TGG | + | chr2_3:3369857-3369876 | Msa0271850:intron | 25.0% |
! | TTAATCAACAAATTAGCATG+GGG | - | chr2_3:3369939-3369958 | None:intergenic | 25.0% |
!! | ATTAGGGTGAATTTTCAAAT+TGG | + | chr2_3:3369996-3370015 | Msa0271850:intron | 25.0% |
!! | TTAGGGTGAATTTTCAAATT+GGG | + | chr2_3:3369997-3370016 | Msa0271850:intron | 25.0% |
! | TGATTATATCCTAATCAACT+GGG | - | chr2_3:3370099-3370118 | None:intergenic | 25.0% |
! | ATGATTATATCCTAATCAAC+TGG | - | chr2_3:3370100-3370119 | None:intergenic | 25.0% |
!!! | TGTTTTGGTAAATAACTAGT+AGG | - | chr2_3:3370415-3370434 | None:intergenic | 25.0% |
!!! | TGTTTTAGTAAAGTACAAGT+AGG | + | chr2_3:3370525-3370544 | Msa0271850:intron | 25.0% |
!! | AAATGTTGAGTTTTCATGTT+TGG | + | chr2_3:3370810-3370829 | Msa0271850:intron | 25.0% |
! | ACTAAGCAAAAAATTTGGAT+GGG | - | chr2_3:3370856-3370875 | None:intergenic | 25.0% |
!! | AGGTAACTATTAGCTTAATA+TGG | - | chr2_3:3371107-3371126 | None:intergenic | 25.0% |
!! | AATACAAGCTTTATGTTGTT+TGG | - | chr2_3:3371175-3371194 | None:intergenic | 25.0% |
!! | CTTCTAAATTTTTACAGTTG+CGG | + | chr2_3:3371451-3371470 | Msa0271850:CDS | 25.0% |
!!! | CTGAATTTGTTAGATTCATT+TGG | - | chr2_3:3371503-3371522 | None:intergenic | 25.0% |
!!! | TTGAACTTTTTATTGACTTC+TGG | + | chr2_3:3371523-3371542 | Msa0271850:intron | 25.0% |
!! | CAGGATAATTTTTATGATTG+CGG | + | chr2_3:3371581-3371600 | Msa0271850:CDS | 25.0% |
! | TTGAAAGGGTTAAATTTGAT+AGG | - | chr2_3:3371650-3371669 | None:intergenic | 25.0% |
!! | AGAACTTTGTTATCTTGAAA+GGG | - | chr2_3:3371664-3371683 | None:intergenic | 25.0% |
! | TAATTTAACATACCACTCAA+TGG | - | chr2_3:3371860-3371879 | None:intergenic | 25.0% |
! | AATGATGTATAATTGTTCCT+TGG | + | chr2_3:3372067-3372086 | Msa0271850:intron | 25.0% |
! | TTTCATGTAATAACTTACCA+AGG | - | chr2_3:3372087-3372106 | None:intergenic | 25.0% |
!!! | CTGCTCAATCATATTTTTTA+TGG | + | chr2_3:3372264-3372283 | Msa0271850:intron | 25.0% |
!!! | ATATTTTTTATGGACAACAC+TGG | + | chr2_3:3372274-3372293 | Msa0271850:intron | 25.0% |
!!! | TTTTAGTAAAAAGGTGTGAA+GGG | - | chr2_3:3372916-3372935 | None:intergenic | 25.0% |
!!! | CTTATAAAGTTTTGTATACG+AGG | - | chr2_3:3372976-3372995 | None:intergenic | 25.0% |
! | AGAAAAAGAAAAGAAAAGAG+GGG | - | chr2_3:3373356-3373375 | None:intergenic | 25.0% |
! | GAGAAAAAGAAAAGAAAAGA+GGG | - | chr2_3:3373357-3373376 | None:intergenic | 25.0% |
! | TGAGAAAAAGAAAAGAAAAG+AGG | - | chr2_3:3373358-3373377 | None:intergenic | 25.0% |
! | ATCTTTACCTATATATGATG+TGG | - | chr2_3:3373647-3373666 | None:intergenic | 25.0% |
! | CAGATTCTACAAAATTCATA+GGG | - | chr2_3:3373702-3373721 | None:intergenic | 25.0% |
! | ACAGATTCTACAAAATTCAT+AGG | - | chr2_3:3373703-3373722 | None:intergenic | 25.0% |
!! | AATTTTGTAGAATCTGTTGA+GGG | + | chr2_3:3373706-3373725 | Msa0271850:CDS | 25.0% |
! | TCTTGAATCCAATTTGAATA+TGG | - | chr2_3:3373736-3373755 | None:intergenic | 25.0% |
! | GCAAAAAGATTTACAAATCA+AGG | - | chr2_3:3374349-3374368 | None:intergenic | 25.0% |
!!! | GTTGATAGCTCTTTTTTTTT+TGG | + | chr2_3:3374416-3374435 | Msa0271850:three_prime_UTR | 25.0% |
!!! | CTTTTTTTTTTGGGTAGTTT+TGG | + | chr2_3:3374426-3374445 | Msa0271850:three_prime_UTR | 25.0% |
! | TATATTAACACAAGTTTCAG+CGG | - | chr2_3:3374475-3374494 | None:intergenic | 25.0% |
! | AAGAATTTCGAATTTCCTAT+AGG | - | chr2_3:3374506-3374525 | None:intergenic | 25.0% |
!! | TACAATATCGAATTTCGTTT+TGG | - | chr2_3:3374537-3374556 | None:intergenic | 25.0% |
! | AAAACTATAAGCTCAAACAT+TGG | - | chr2_3:3374682-3374701 | None:intergenic | 25.0% |
TGTTTATATGGTCAATTGCT+TGG | + | chr2_3:3363685-3363704 | Msa0271850:intron | 30.0% | |
GAGGCAAAATGTAAAATCTT+TGG | + | chr2_3:3363742-3363761 | Msa0271850:intron | 30.0% | |
GTCAAAGAAAGAAAGAAATG+AGG | + | chr2_3:3363893-3363912 | Msa0271850:intron | 30.0% | |
AGACCATAACATTAGAAAGA+AGG | - | chr2_3:3363982-3364001 | None:intergenic | 30.0% | |
! | TTGTAGAATTTGTTTGGCAA+TGG | + | chr2_3:3364123-3364142 | Msa0271850:intron | 30.0% |
TTAGTTGTGTATGTAAGTGT+AGG | + | chr2_3:3364289-3364308 | Msa0271850:intron | 30.0% | |
! | CTTCCCTGATTTTATTCATA+CGG | + | chr2_3:3364513-3364532 | Msa0271850:CDS | 30.0% |
! | TTCCCTGATTTTATTCATAC+GGG | + | chr2_3:3364514-3364533 | Msa0271850:CDS | 30.0% |
GACGGTCAAATTTATCATTA+AGG | - | chr2_3:3364719-3364738 | None:intergenic | 30.0% | |
TTTAATCTACAGACAGAAGA+CGG | - | chr2_3:3364737-3364756 | None:intergenic | 30.0% | |
! | AATCTTTTGATCTAAGGAGA+AGG | - | chr2_3:3364774-3364793 | None:intergenic | 30.0% |
! | CTTCTGAATCTTTTGATCTA+AGG | - | chr2_3:3364780-3364799 | None:intergenic | 30.0% |
TTGTAAGCAAATCAAGGATA+GGG | - | chr2_3:3364891-3364910 | None:intergenic | 30.0% | |
GCAGGTATACTTTAATCAAT+TGG | + | chr2_3:3364920-3364939 | Msa0271850:intron | 30.0% | |
AATTGTCTAAGCAATCAACT+TGG | - | chr2_3:3365167-3365186 | None:intergenic | 30.0% | |
TTGCTTAGACAATTAGACAA+CGG | + | chr2_3:3365173-3365192 | Msa0271850:intron | 30.0% | |
GATTCATATGAAAGGTGATA+AGG | - | chr2_3:3365336-3365355 | None:intergenic | 30.0% | |
!! | TGAACATCGATTCATATGAA+AGG | - | chr2_3:3365344-3365363 | None:intergenic | 30.0% |
TTTATGATTCATATTGGTCC+AGG | + | chr2_3:3365393-3365412 | Msa0271850:CDS | 30.0% | |
TTATGATTCATATTGGTCCA+GGG | + | chr2_3:3365394-3365413 | Msa0271850:CDS | 30.0% | |
AGAAGAGGCTATCAAATTAT+TGG | + | chr2_3:3365418-3365437 | Msa0271850:CDS | 30.0% | |
CCAAAAATAATTAGGCAGTA+AGG | - | chr2_3:3365546-3365565 | None:intergenic | 30.0% | |
! | CCTTACTGCCTAATTATTTT+TGG | + | chr2_3:3365543-3365562 | Msa0271850:intron | 30.0% |
! | TTTTCTGTGTTCCTTTTATC+TGG | + | chr2_3:3365765-3365784 | Msa0271850:intron | 30.0% |
!! | GTTCCTTTTATCTGGAATAT+TGG | + | chr2_3:3365773-3365792 | Msa0271850:intron | 30.0% |
GAACCAATATTCCAGATAAA+AGG | - | chr2_3:3365779-3365798 | None:intergenic | 30.0% | |
GAAACCCTAATACTTCAAAA+TGG | + | chr2_3:3365819-3365838 | Msa0271850:intron | 30.0% | |
ATACTTTCTGGATACATATC+AGG | - | chr2_3:3365885-3365904 | None:intergenic | 30.0% | |
! | AAATGTTTTTCCATATGCAC+CGG | - | chr2_3:3366076-3366095 | None:intergenic | 30.0% |
CATATGGAAAAACATTTGCT+GGG | + | chr2_3:3366079-3366098 | Msa0271850:intron | 30.0% | |
ATATATTCTGATATAGGTGG+GGG | + | chr2_3:3366291-3366310 | Msa0271850:intron | 30.0% | |
TCTGTAAATGTCAACTTGTA+AGG | + | chr2_3:3366363-3366382 | Msa0271850:intron | 30.0% | |
AAATAATTCTATACTGGGAC+AGG | + | chr2_3:3366444-3366463 | Msa0271850:CDS | 30.0% | |
AATGTTTGTTCGACTTACAT+GGG | - | chr2_3:3366499-3366518 | None:intergenic | 30.0% | |
AAATGTTTGTTCGACTTACA+TGG | - | chr2_3:3366500-3366519 | None:intergenic | 30.0% | |
TACTTCCATTGTTTGATATC+TGG | + | chr2_3:3366521-3366540 | Msa0271850:intron | 30.0% | |
ATACTTTCAAGAGTTACCAA+GGG | - | chr2_3:3366717-3366736 | None:intergenic | 30.0% | |
TATACTTTCAAGAGTTACCA+AGG | - | chr2_3:3366718-3366737 | None:intergenic | 30.0% | |
!!! | GACTTCCTATTTTTGGTAAT+TGG | + | chr2_3:3367090-3367109 | Msa0271850:intron | 30.0% |
GTATCGAATGATAGTTGTTA+AGG | + | chr2_3:3367130-3367149 | Msa0271850:intron | 30.0% | |
AAGAAATTGTAACTTTCCGT+TGG | + | chr2_3:3367339-3367358 | Msa0271850:intron | 30.0% | |
ACAACTTTCAATCTAAAGGA+TGG | - | chr2_3:3367454-3367473 | None:intergenic | 30.0% | |
TTCAAAAAGGTTAACTTTCC+TGG | - | chr2_3:3367769-3367788 | None:intergenic | 30.0% | |
TATAGCTTATGATAATTCGG+GGG | + | chr2_3:3368179-3368198 | Msa0271850:intron | 30.0% | |
AAGGTAAACAGCTCAAATTT+GGG | - | chr2_3:3368280-3368299 | None:intergenic | 30.0% | |
TAAGGTAAACAGCTCAAATT+TGG | - | chr2_3:3368281-3368300 | None:intergenic | 30.0% | |
AGCCATTAGATTAAAAGCAA+GGG | + | chr2_3:3368492-3368511 | Msa0271850:intron | 30.0% | |
!! | ATCCCTTGCTTTTAATCTAA+TGG | - | chr2_3:3368497-3368516 | None:intergenic | 30.0% |
AGATAATTGAAGAAACGTGA+GGG | - | chr2_3:3368793-3368812 | None:intergenic | 30.0% | |
GGATCGAGAGAATTAAAAAA+TGG | - | chr2_3:3368827-3368846 | None:intergenic | 30.0% | |
!!! | GACTTGTGTTTTCTTGTTTT+TGG | - | chr2_3:3369279-3369298 | None:intergenic | 30.0% |
AGATTAGAAAGTCACAGTAA+AGG | - | chr2_3:3369310-3369329 | None:intergenic | 30.0% | |
GCCATCAATTACAAATCTAA+AGG | + | chr2_3:3369332-3369351 | Msa0271850:intron | 30.0% | |
GCCTTTAGATTTGTAATTGA+TGG | - | chr2_3:3369336-3369355 | None:intergenic | 30.0% | |
CAATGATATATGAGAATGGT+AGG | - | chr2_3:3369370-3369389 | None:intergenic | 30.0% | |
ATCTTATAATGAGAGATGAG+AGG | + | chr2_3:3369524-3369543 | Msa0271850:intron | 30.0% | |
GACCATTAGATTAAACTCTA+CGG | + | chr2_3:3369557-3369576 | Msa0271850:intron | 30.0% | |
TAGAGCTAGAATTTGAAAAG+GGG | - | chr2_3:3369827-3369846 | None:intergenic | 30.0% | |
CTAGAGCTAGAATTTGAAAA+GGG | - | chr2_3:3369828-3369847 | None:intergenic | 30.0% | |
TAGTCGAATAGAAACAATGA+TGG | + | chr2_3:3369887-3369906 | Msa0271850:intron | 30.0% | |
AGTCGAATAGAAACAATGAT+GGG | + | chr2_3:3369888-3369907 | Msa0271850:intron | 30.0% | |
AAAAAAATTACTGATGCGTG+TGG | + | chr2_3:3370027-3370046 | Msa0271850:intron | 30.0% | |
AAAGAAGAAAACAAAGCAGT+AGG | + | chr2_3:3370127-3370146 | Msa0271850:intron | 30.0% | |
AAGAAGAAAACAAAGCAGTA+GGG | + | chr2_3:3370128-3370147 | Msa0271850:intron | 30.0% | |
ATCCGTTGGATTAAATCTAA+TGG | + | chr2_3:3370258-3370277 | Msa0271850:intron | 30.0% | |
GAGATGAGAGGAATAAAAAA+TGG | - | chr2_3:3369536-3369555 | None:intergenic | 30.0% | |
ATCTTATAATGAGAGATGAG+AGG | - | chr2_3:3369524-3369543 | None:intergenic | 30.0% | |
! | ATAGAAAAACATGGGTGTTT+TGG | - | chr2_3:3370430-3370449 | None:intergenic | 30.0% |
GAGAGAATAAAAAACTCTAC+CGG | - | chr2_3:3370730-3370749 | None:intergenic | 30.0% | |
GAAAACTCAACATTTGCATA+CGG | - | chr2_3:3370805-3370824 | None:intergenic | 30.0% | |
GACTAAGCAAAAAATTTGGA+TGG | - | chr2_3:3370857-3370876 | None:intergenic | 30.0% | |
GAGTGACTAAGCAAAAAATT+TGG | - | chr2_3:3370861-3370880 | None:intergenic | 30.0% | |
TGGTTGACACAAAAACATAA+GGG | - | chr2_3:3371068-3371087 | None:intergenic | 30.0% | |
TTGGTTGACACAAAAACATA+AGG | - | chr2_3:3371069-3371088 | None:intergenic | 30.0% | |
TAGCTTAATATGGACTTCAA+TGG | - | chr2_3:3371097-3371116 | None:intergenic | 30.0% | |
! | AAAGACATCAATAACTTGCA+AGG | - | chr2_3:3371127-3371146 | None:intergenic | 30.0% |
AGTTATTGATGTCTTTGCAT+TGG | + | chr2_3:3371131-3371150 | Msa0271850:intron | 30.0% | |
TGCATTGGAAGTTTCATAAT+CGG | + | chr2_3:3371146-3371165 | Msa0271850:intron | 30.0% | |
! | GTTTATACAATTTTCTGCAG+TGG | - | chr2_3:3371264-3371283 | None:intergenic | 30.0% |
TCATAAAAATTATCCTGCTG+AGG | - | chr2_3:3371578-3371597 | None:intergenic | 30.0% | |
!!! | TCTGTTTTTGCTTTACTTTG+TGG | + | chr2_3:3371604-3371623 | Msa0271850:CDS | 30.0% |
! | GAGAACTTTGTTATCTTGAA+AGG | - | chr2_3:3371665-3371684 | None:intergenic | 30.0% |
TATGAAGTCACTCACAAATT+TGG | - | chr2_3:3371687-3371706 | None:intergenic | 30.0% | |
ATTTGTGAGTGACTTCATAT+TGG | + | chr2_3:3371688-3371707 | Msa0271850:intron | 30.0% | |
AAGTTATTACATGAAATGCG+TGG | + | chr2_3:3372091-3372110 | Msa0271850:intron | 30.0% | |
AGTTATTACATGAAATGCGT+GGG | + | chr2_3:3372092-3372111 | Msa0271850:intron | 30.0% | |
!! | GTGGGTTATACTTTTACTTT+GGG | + | chr2_3:3372110-3372129 | Msa0271850:intron | 30.0% |
! | ATACTTTTACTTTGGGTACT+TGG | + | chr2_3:3372117-3372136 | Msa0271850:intron | 30.0% |
CTTAAAATCGTCAAGAGATT+GGG | - | chr2_3:3372161-3372180 | None:intergenic | 30.0% | |
ACTTAAAATCGTCAAGAGAT+TGG | - | chr2_3:3372162-3372181 | None:intergenic | 30.0% | |
ATTCTCAGTTGAATAGTAAC+TGG | + | chr2_3:3372330-3372349 | Msa0271850:intron | 30.0% | |
ATGGTTGAGATCCATTATAT+CGG | + | chr2_3:3372876-3372895 | Msa0271850:intron | 30.0% | |
! | TTTAGTAAAAAGGTGTGAAG+GGG | - | chr2_3:3372915-3372934 | None:intergenic | 30.0% |
!! | GTTTTAGTAAAAAGGTGTGA+AGG | - | chr2_3:3372917-3372936 | None:intergenic | 30.0% |
TAATATTCTCGAGTTTGAGT+GGG | - | chr2_3:3373153-3373172 | None:intergenic | 30.0% | |
ATAATATTCTCGAGTTTGAG+TGG | - | chr2_3:3373154-3373173 | None:intergenic | 30.0% | |
ATATATTATTTCACAGAGGC+TGG | + | chr2_3:3373248-3373267 | Msa0271850:intron | 30.0% | |
CTCTAACCATATAAATAACC+GGG | - | chr2_3:3373426-3373445 | None:intergenic | 30.0% | |
GCTCTAACCATATAAATAAC+CGG | - | chr2_3:3373427-3373446 | None:intergenic | 30.0% | |
GTTAGAGCTGTTAAATTGTT+GGG | + | chr2_3:3373439-3373458 | Msa0271850:intron | 30.0% | |
ACATATCATTACTATGATGC+AGG | + | chr2_3:3373537-3373556 | Msa0271850:intron | 30.0% | |
CGATGAAGTTTCTAAATCAA+TGG | + | chr2_3:3373576-3373595 | Msa0271850:CDS | 30.0% | |
TACCTATATATGATGTGGAT+GGG | - | chr2_3:3373642-3373661 | None:intergenic | 30.0% | |
TTACCTATATATGATGTGGA+TGG | - | chr2_3:3373643-3373662 | None:intergenic | 30.0% | |
! | GAATTTTGTAGAATCTGTTG+AGG | + | chr2_3:3373705-3373724 | Msa0271850:CDS | 30.0% |
TTCCATGACTCATCAAATAT+TGG | + | chr2_3:3374014-3374033 | Msa0271850:CDS | 30.0% | |
ATCCAATATTTGATGAGTCA+TGG | - | chr2_3:3374019-3374038 | None:intergenic | 30.0% | |
GACTCATCAAATATTGGATT+TGG | + | chr2_3:3374020-3374039 | Msa0271850:CDS | 30.0% | |
GCTAAATTATTCACATGACA+TGG | - | chr2_3:3374209-3374228 | None:intergenic | 30.0% | |
AAGTATGAGCAGTAGATTAA+AGG | + | chr2_3:3374309-3374328 | Msa0271850:three_prime_UTR | 30.0% | |
!!! | TTTTTTTTGGGTAGTTTTGG+TGG | + | chr2_3:3374429-3374448 | Msa0271850:three_prime_UTR | 30.0% |
!!! | TTTTTTTGGGTAGTTTTGGT+GGG | + | chr2_3:3374430-3374449 | Msa0271850:three_prime_UTR | 30.0% |
TAATATATCCAGTGTCCTAT+AGG | + | chr2_3:3374488-3374507 | Msa0271850:three_prime_UTR | 30.0% | |
AATGAGGTACAAGTAAGAGA+TGG | + | chr2_3:3363909-3363928 | Msa0271850:intron | 35.0% | |
ATGAGGTACAAGTAAGAGAT+GGG | + | chr2_3:3363910-3363929 | Msa0271850:intron | 35.0% | |
! | AGGCAGTTGTAGAATTTGTT+TGG | + | chr2_3:3364117-3364136 | Msa0271850:intron | 35.0% |
!!! | CTTTTTTTGGTTCCTGCAAT+TGG | + | chr2_3:3364194-3364213 | Msa0271850:intron | 35.0% |
TCAGCTTATGTGATCTAATC+TGG | + | chr2_3:3364222-3364241 | Msa0271850:intron | 35.0% | |
TGTAAGTGTAGGTTCTCAAT+TGG | + | chr2_3:3364300-3364319 | Msa0271850:intron | 35.0% | |
AATCTTGCTCTTTCATGCAT+CGG | + | chr2_3:3364358-3364377 | Msa0271850:intron | 35.0% | |
GTTAGATATCTCTGGTTAAC+TGG | + | chr2_3:3364439-3364458 | Msa0271850:intron | 35.0% | |
! | TCCCTGATTTTATTCATACG+GGG | + | chr2_3:3364515-3364534 | Msa0271850:CDS | 35.0% |
TCCCCGTATGAATAAAATCA+GGG | - | chr2_3:3364519-3364538 | None:intergenic | 35.0% | |
TTCCCCGTATGAATAAAATC+AGG | - | chr2_3:3364520-3364539 | None:intergenic | 35.0% | |
AGAATATTAACGAGAACTGG+TGG | - | chr2_3:3364550-3364569 | None:intergenic | 35.0% | |
TCGAGAATATTAACGAGAAC+TGG | - | chr2_3:3364553-3364572 | None:intergenic | 35.0% | |
TTCCCAGTTGATTGTTTGTT+GGG | - | chr2_3:3364598-3364617 | None:intergenic | 35.0% | |
TTTCCCAGTTGATTGTTTGT+TGG | - | chr2_3:3364599-3364618 | None:intergenic | 35.0% | |
GTCTGTAGATTAAAACAGCA+TGG | + | chr2_3:3364743-3364762 | Msa0271850:intron | 35.0% | |
TCAAAAGATTCAGAAGACGT+TGG | + | chr2_3:3364784-3364803 | Msa0271850:CDS | 35.0% | |
GGCATTACAAATGAAAAACC+AGG | + | chr2_3:3364805-3364824 | Msa0271850:CDS | 35.0% | |
CTTGTAAGCAAATCAAGGAT+AGG | - | chr2_3:3364892-3364911 | None:intergenic | 35.0% | |
! | TGTCACTTGTAAGCAAATCA+AGG | - | chr2_3:3364897-3364916 | None:intergenic | 35.0% |
! | ATGCCCTTGATAGTAATCAT+AGG | + | chr2_3:3365001-3365020 | Msa0271850:intron | 35.0% |
AACTTGGTCCTAAACTATAG+AGG | - | chr2_3:3365151-3365170 | None:intergenic | 35.0% | |
TTAGACAATTAGACAACGGA+TGG | + | chr2_3:3365177-3365196 | Msa0271850:intron | 35.0% | |
!! | AAAGCATCGTATGAGCATAA+AGG | - | chr2_3:3365312-3365331 | None:intergenic | 35.0% |
ATATGAATCGATGTTCATGC+AGG | + | chr2_3:3365347-3365366 | Msa0271850:intron | 35.0% | |
ATATGAGATACCCAAGTATC+TGG | + | chr2_3:3365441-3365460 | Msa0271850:CDS | 35.0% | |
AAACTGTACTCCAGATACTT+GGG | - | chr2_3:3365454-3365473 | None:intergenic | 35.0% | |
AAAACTGTACTCCAGATACT+TGG | - | chr2_3:3365455-3365474 | None:intergenic | 35.0% | |
!! | GATACATATCAGGAAGTATC+AGG | - | chr2_3:3365875-3365894 | None:intergenic | 35.0% |
ATCTACCTACCAACATAGTA+TGG | + | chr2_3:3365995-3366014 | Msa0271850:intron | 35.0% | |
GCATATGGAAAAACATTTGC+TGG | + | chr2_3:3366078-3366097 | Msa0271850:intron | 35.0% | |
ATGTATCTCAATTAGCTCGA+TGG | + | chr2_3:3366119-3366138 | Msa0271850:intron | 35.0% | |
TGTATCTCAATTAGCTCGAT+GGG | + | chr2_3:3366120-3366139 | Msa0271850:intron | 35.0% | |
AATGTCAACTTGTAAGGTGT+TGG | + | chr2_3:3366369-3366388 | Msa0271850:intron | 35.0% | |
GTTCACCAGATATCAAACAA+TGG | - | chr2_3:3366529-3366548 | None:intergenic | 35.0% | |
AAAGCACAAGGATTCGAATT+AGG | - | chr2_3:3366823-3366842 | None:intergenic | 35.0% | |
!!! | TTCGAATCCTTGTGCTTTTT+TGG | + | chr2_3:3366825-3366844 | Msa0271850:intron | 35.0% |
! | ACAAGAACCAAAAAAGCACA+AGG | - | chr2_3:3366835-3366854 | None:intergenic | 35.0% |
! | TATATATGTATGGGCTGACA+AGG | - | chr2_3:3366908-3366927 | None:intergenic | 35.0% |
!! | CAGTTTTGATGAAGCATTTG+AGG | + | chr2_3:3367191-3367210 | Msa0271850:intron | 35.0% |
!! | TTTTGATGAAGCATTTGAGG+AGG | + | chr2_3:3367194-3367213 | Msa0271850:CDS | 35.0% |
TGAGGAGGTTATTTATCCAA+AGG | + | chr2_3:3367209-3367228 | Msa0271850:CDS | 35.0% | |
GAGGAGGTTATTTATCCAAA+GGG | + | chr2_3:3367210-3367229 | Msa0271850:CDS | 35.0% | |
AGGAGGTTATTTATCCAAAG+GGG | + | chr2_3:3367211-3367230 | Msa0271850:CDS | 35.0% | |
TTGCTAATAGAAACAGCATC+AGG | - | chr2_3:3367240-3367259 | None:intergenic | 35.0% | |
ATGAATGAGACACAAAACGA+GGG | - | chr2_3:3367389-3367408 | None:intergenic | 35.0% | |
CAAATGGAATAACTCCTCAA+AGG | + | chr2_3:3367530-3367549 | Msa0271850:intron | 35.0% | |
GAGGCATATATAAACCTTTG+AGG | - | chr2_3:3367547-3367566 | None:intergenic | 35.0% | |
GAAAGATATCTTACCTCTGA+AGG | - | chr2_3:3367959-3367978 | None:intergenic | 35.0% | |
TCCTTGAAAGGAAGTCATAA+AGG | + | chr2_3:3368090-3368109 | Msa0271850:CDS | 35.0% | |
ACCTTTATGACTTCCTTTCA+AGG | - | chr2_3:3368094-3368113 | None:intergenic | 35.0% | |
! | GTCTCAAGAATCTTTTCCAA+AGG | + | chr2_3:3368112-3368131 | Msa0271850:CDS | 35.0% |
CGTTGATACTGTATTGAACT+TGG | - | chr2_3:3368152-3368171 | None:intergenic | 35.0% | |
CAGCCATTAGATTAAAAGCA+AGG | + | chr2_3:3368491-3368510 | Msa0271850:intron | 35.0% | |
GATAATTGAAGAAACGTGAG+GGG | - | chr2_3:3368792-3368811 | None:intergenic | 35.0% | |
GAGATAATTGAAGAAACGTG+AGG | - | chr2_3:3368794-3368813 | None:intergenic | 35.0% | |
!!! | TCACCACCAATTGTTTTTTC+TGG | + | chr2_3:3369101-3369120 | Msa0271850:intron | 35.0% |
GAACCAGAAAAAACAATTGG+TGG | - | chr2_3:3369107-3369126 | None:intergenic | 35.0% | |
AATCACCACAATGAGAATAG+TGG | + | chr2_3:3369181-3369200 | Msa0271850:intron | 35.0% | |
CAAAACCACTATTCTCATTG+TGG | - | chr2_3:3369189-3369208 | None:intergenic | 35.0% | |
! | CACAATGAGAATAGTGGTTT+TGG | + | chr2_3:3369187-3369206 | Msa0271850:intron | 35.0% |
AATAAGAATGCATACAGGGT+TGG | + | chr2_3:3369226-3369245 | Msa0271850:intron | 35.0% | |
CACCGTAGAGTTTAATCTAA+TGG | - | chr2_3:3369562-3369581 | None:intergenic | 35.0% | |
TGAAGAAAGAGAAAGGTTCA+GGG | - | chr2_3:3369643-3369662 | None:intergenic | 35.0% | |
ATGAAGAAAGAGAAAGGTTC+AGG | - | chr2_3:3369644-3369663 | None:intergenic | 35.0% | |
GAACGAATGAAGAAAGAGAA+AGG | - | chr2_3:3369650-3369669 | None:intergenic | 35.0% | |
! | GAAAGTACAGAGAAGAATCA+TGG | - | chr2_3:3369693-3369712 | None:intergenic | 35.0% |
AGAGCTAGAATTTGAAAAGG+GGG | - | chr2_3:3369826-3369845 | None:intergenic | 35.0% | |
GCTAGAGCTAGAATTTGAAA+AGG | - | chr2_3:3369829-3369848 | None:intergenic | 35.0% | |
ATTAGCATGGGGTTAAATCA+AGG | - | chr2_3:3369928-3369947 | None:intergenic | 35.0% | |
AGAAGAAAACAAAGCAGTAG+GGG | + | chr2_3:3370129-3370148 | Msa0271850:intron | 35.0% | |
AATATCCAAGCATGTGTGTT+TGG | - | chr2_3:3370205-3370224 | None:intergenic | 35.0% | |
AGGAATAAGATCTAATCCGT+TGG | + | chr2_3:3370244-3370263 | Msa0271850:intron | 35.0% | |
GGCCATTAGATTTAATCCAA+CGG | - | chr2_3:3370263-3370282 | None:intergenic | 35.0% | |
! | ACTTGCACCTTAGTGTTTTT+AGG | - | chr2_3:3370380-3370399 | None:intergenic | 35.0% |
ATAAAAAACTCTACCGGACT+GGG | - | chr2_3:3370724-3370743 | None:intergenic | 35.0% | |
AATAAAAAACTCTACCGGAC+TGG | - | chr2_3:3370725-3370744 | None:intergenic | 35.0% | |
!!! | TTTTTTATTCTCTCCAGCCT+GGG | + | chr2_3:3370736-3370755 | Msa0271850:intron | 35.0% |
ACAATGATCATCAACAGTGA+CGG | - | chr2_3:3371041-3371060 | None:intergenic | 35.0% | |
TTATCTGAAGAACCATGAGA+TGG | + | chr2_3:3371201-3371220 | Msa0271850:intron | 35.0% | |
ATGGTTTCACAAGGTTTCTT+TGG | + | chr2_3:3371220-3371239 | Msa0271850:intron | 35.0% | |
TGTTAGATTCATTTGGAGAG+AGG | - | chr2_3:3371496-3371515 | None:intergenic | 35.0% | |
! | TTACTTTGTGGAACGTTTTC+TGG | + | chr2_3:3371616-3371635 | Msa0271850:CDS | 35.0% |
AACATACCACTCAATGGAAT+CGG | - | chr2_3:3371854-3371873 | None:intergenic | 35.0% | |
! | TGACAATATACTTGCTGCTA+TGG | + | chr2_3:3371905-3371924 | Msa0271850:intron | 35.0% |
CTATAACCATGAAAAAGCAG+AGG | - | chr2_3:3371932-3371951 | None:intergenic | 35.0% | |
!!! | CTCTGCTTTTTCATGGTTAT+AGG | + | chr2_3:3371930-3371949 | Msa0271850:intron | 35.0% |
!! | CGTGGGTTATACTTTTACTT+TGG | + | chr2_3:3372109-3372128 | Msa0271850:intron | 35.0% |
GAGATACAATCTGATATGAC+AGG | - | chr2_3:3372241-3372260 | None:intergenic | 35.0% | |
! | AGATCCTGGAATTGTTTTCA+AGG | + | chr2_3:3372628-3372647 | Msa0271850:CDS | 35.0% |
AAGTCCTTGAAAACAATTCC+AGG | - | chr2_3:3372635-3372654 | None:intergenic | 35.0% | |
ACTATTCCTGTACACATGAT+AGG | - | chr2_3:3373318-3373337 | None:intergenic | 35.0% | |
CATATAAATAACCGGGTACT+GGG | - | chr2_3:3373419-3373438 | None:intergenic | 35.0% | |
GGTTAGAGCTGTTAAATTGT+TGG | + | chr2_3:3373438-3373457 | Msa0271850:intron | 35.0% | |
AATGATATGTGAAGTTCTGC+AGG | - | chr2_3:3373527-3373546 | None:intergenic | 35.0% | |
CATTACTATGATGCAGGAAA+CGG | + | chr2_3:3373543-3373562 | Msa0271850:intron | 35.0% | |
! | AAATTCTCAAGCAGGCATTT+TGG | + | chr2_3:3373606-3373625 | Msa0271850:CDS | 35.0% |
TTCCCATCCACATCATATAT+AGG | + | chr2_3:3373637-3373656 | Msa0271850:CDS | 35.0% | |
! | AGGGCATTCCATATTCAAAT+TGG | + | chr2_3:3373725-3373744 | Msa0271850:CDS | 35.0% |
! | TGCTATCTTGTTTGGAAAGT+TGG | - | chr2_3:3373797-3373816 | None:intergenic | 35.0% |
CTCTTGAGAATCTTGAACAA+CGG | - | chr2_3:3373839-3373858 | None:intergenic | 35.0% | |
CAAGATTCTCAAGAGTCAAA+TGG | + | chr2_3:3373844-3373863 | Msa0271850:CDS | 35.0% | |
ATTCTCAAGAGTCAAATGGT+AGG | + | chr2_3:3373848-3373867 | Msa0271850:CDS | 35.0% | |
CAAGATTCTCAAGAGTCAAA+CGG | + | chr2_3:3373844-3373863 | Msa0271850:CDS | 35.0% | |
GTTGAGAATGATAGTTTAGC+TGG | + | chr2_3:3374057-3374076 | Msa0271850:CDS | 35.0% | |
!! | AGATTAAAGGTACCAACATG+TGG | + | chr2_3:3374322-3374341 | Msa0271850:three_prime_UTR | 35.0% |
TCGATATTGTATCACCAGAA+TGG | + | chr2_3:3374546-3374565 | Msa0271850:three_prime_UTR | 35.0% | |
CGATATTGTATCACCAGAAT+GGG | + | chr2_3:3374547-3374566 | Msa0271850:three_prime_UTR | 35.0% | |
CAGAATGGGTGAAAAATCAT+GGG | + | chr2_3:3374561-3374580 | Msa0271850:three_prime_UTR | 35.0% | |
TTGACCAAACGATTGGTATT+TGG | + | chr2_3:3374601-3374620 | Msa0271850:three_prime_UTR | 35.0% | |
TTCACCAAATACCAATCGTT+TGG | - | chr2_3:3374608-3374627 | None:intergenic | 35.0% | |
! | CAAAGCAATCTGAAATCGCA+AGG | - | chr2_3:3363608-3363627 | None:intergenic | 40.0% |
!! | TTGCTTTGAAGATCACCTAG+TGG | + | chr2_3:3363620-3363639 | Msa0271850:CDS | 40.0% |
GATTACAATCATCAGCAGGT+AGG | - | chr2_3:3363718-3363737 | None:intergenic | 40.0% | |
! | CACTGATTACAATCATCAGC+AGG | - | chr2_3:3363722-3363741 | None:intergenic | 40.0% |
CTGCTGATGATTGTAATCAG+TGG | + | chr2_3:3363720-3363739 | Msa0271850:intron | 40.0% | |
CTGATGATTGTAATCAGTGG+AGG | + | chr2_3:3363723-3363742 | Msa0271850:intron | 40.0% | |
TGAGGTACAAGTAAGAGATG+GGG | + | chr2_3:3363911-3363930 | Msa0271850:intron | 40.0% | |
CAAATTCTACAACTGCCTTC+AGG | - | chr2_3:3364115-3364134 | None:intergenic | 40.0% | |
! | TTTGGTTCCTGCAATTGGTT+TGG | + | chr2_3:3364199-3364218 | Msa0271850:intron | 40.0% |
!! | CGAATCATGCTGGTTTGAAA+AGG | + | chr2_3:3364660-3364679 | Msa0271850:CDS | 40.0% |
TTTACAAAAGTGGTCACACC+TGG | - | chr2_3:3364826-3364845 | None:intergenic | 40.0% | |
ATCATTGTGGATTTAGCCTC+TGG | + | chr2_3:3365081-3365100 | Msa0271850:intron | 40.0% | |
CACGAGATGCATTCCATTAA+TGG | + | chr2_3:3365736-3365755 | Msa0271850:intron | 40.0% | |
!! | AGGAAGTATCAGGCATGTAT+TGG | - | chr2_3:3365865-3365884 | None:intergenic | 40.0% |
TACTTGGGTCCTTAACCATT+TGG | + | chr2_3:3366031-3366050 | Msa0271850:intron | 40.0% | |
TTTGCATCAATGCTGCATGA+AGG | - | chr2_3:3366415-3366434 | None:intergenic | 40.0% | |
ATAACATAAACGAGCAGCAC+TGG | - | chr2_3:3366663-3366682 | None:intergenic | 40.0% | |
ATTAGGTGCAGTCTCATTCA+TGG | - | chr2_3:3366806-3366825 | None:intergenic | 40.0% | |
TCTTCAACGCATGACTAAAG+AGG | - | chr2_3:3366878-3366897 | None:intergenic | 40.0% | |
TATTAAGTGCATGCTCACGA+TGG | - | chr2_3:3366936-3366955 | None:intergenic | 40.0% | |
!! | TCCGTGAAGCTTGGTTTTTA+CGG | + | chr2_3:3367036-3367055 | Msa0271850:intron | 40.0% |
ACCGTAAAAACCAAGCTTCA+CGG | - | chr2_3:3367040-3367059 | None:intergenic | 40.0% | |
GGAGGTTATTTATCCAAAGG+GGG | + | chr2_3:3367212-3367231 | Msa0271850:CDS | 40.0% | |
GCTATGTCAATGGAAACCAA+CGG | - | chr2_3:3367358-3367377 | None:intergenic | 40.0% | |
GGTAAACACTGCTATGTCAA+TGG | - | chr2_3:3367368-3367387 | None:intergenic | 40.0% | |
CATGAATGAGACACAAAACG+AGG | - | chr2_3:3367390-3367409 | None:intergenic | 40.0% | |
! | TGGAGAAGAGTACAAGTGAT+GGG | - | chr2_3:3367434-3367453 | None:intergenic | 40.0% |
! | ATGGAGAAGAGTACAAGTGA+TGG | - | chr2_3:3367435-3367454 | None:intergenic | 40.0% |
! | GGAATGACATTTGCTGAATC+TGG | + | chr2_3:3367586-3367605 | Msa0271850:intron | 40.0% |
TCTTGATTCCCGTAAACTAC+AGG | + | chr2_3:3367799-3367818 | Msa0271850:CDS | 40.0% | |
AGGCTCTTACCTGTAGTTTA+CGG | - | chr2_3:3367811-3367830 | None:intergenic | 40.0% | |
TTGATCGTCATTTGTCATCC+TGG | + | chr2_3:3367922-3367941 | Msa0271850:CDS | 40.0% | |
TGATCGTCATTTGTCATCCT+GGG | + | chr2_3:3367923-3367942 | Msa0271850:CDS | 40.0% | |
! | GATATCTTACCTCTGAAGGA+TGG | - | chr2_3:3367955-3367974 | None:intergenic | 40.0% |
TGAGAGAGTGATCACATGAT+TGG | - | chr2_3:3368557-3368576 | None:intergenic | 40.0% | |
ACTACTTCTCATTTCACCAC+TGG | + | chr2_3:3368576-3368595 | Msa0271850:intron | 40.0% | |
!! | AAAACAATTGGTGGTGACAG+CGG | - | chr2_3:3369098-3369117 | None:intergenic | 40.0% |
! | CTGGTTCTTATAGCTTCTGA+TGG | + | chr2_3:3369120-3369139 | Msa0271850:intron | 40.0% |
!!! | AGAATAGTGGTTTTGGCTCA+AGG | + | chr2_3:3369194-3369213 | Msa0271850:intron | 40.0% |
TAGAGGACATATCAAGTGAG+AGG | + | chr2_3:3369499-3369518 | Msa0271850:intron | 40.0% | |
TACAGAGAAGAATCATGGAG+AGG | - | chr2_3:3369688-3369707 | None:intergenic | 40.0% | |
AAGAAGAGAAAGGCGATGTT+GGG | + | chr2_3:3370155-3370174 | Msa0271850:intron | 40.0% | |
ACACACATGCTTGGATATTG+TGG | + | chr2_3:3370206-3370225 | Msa0271850:intron | 40.0% | |
!!! | GCACCTTAGTGTTTTTAGGT+GGG | - | chr2_3:3370376-3370395 | None:intergenic | 40.0% |
!!! | TGCACCTTAGTGTTTTTAGG+TGG | - | chr2_3:3370377-3370396 | None:intergenic | 40.0% |
!! | AGCTTGTTAACTTGCACCTT+AGG | + | chr2_3:3370551-3370570 | Msa0271850:intron | 40.0% |
!! | TTGTTAACTTGCACCTTAGG+TGG | + | chr2_3:3370554-3370573 | Msa0271850:intron | 40.0% |
!! | TGTTAACTTGCACCTTAGGT+GGG | + | chr2_3:3370555-3370574 | Msa0271850:intron | 40.0% |
!!! | GTTTTTTATTCTCTCCAGCC+TGG | + | chr2_3:3370735-3370754 | Msa0271850:intron | 40.0% |
!! | TAGAAAGTGTTCCTGTACCA+CGG | - | chr2_3:3370922-3370941 | None:intergenic | 40.0% |
CAATGATCATCAACAGTGAC+GGG | - | chr2_3:3371040-3371059 | None:intergenic | 40.0% | |
ATGGACTTCAATGGCATGTT+TGG | - | chr2_3:3371088-3371107 | None:intergenic | 40.0% | |
AACCATGAGATGGTTTCACA+AGG | + | chr2_3:3371211-3371230 | Msa0271850:intron | 40.0% | |
AACCTTGTGAAACCATCTCA+TGG | - | chr2_3:3371216-3371235 | None:intergenic | 40.0% | |
AGCTGTCATCTCACAATATG+TGG | - | chr2_3:3371380-3371399 | None:intergenic | 40.0% | |
AAAAATCATCCGCCGTATTG+GGG | - | chr2_3:3371431-3371450 | None:intergenic | 40.0% | |
GAAAAATCATCCGCCGTATT+GGG | - | chr2_3:3371432-3371451 | None:intergenic | 40.0% | |
AGAAAAATCATCCGCCGTAT+TGG | - | chr2_3:3371433-3371452 | None:intergenic | 40.0% | |
TCAAGCAGCACTATTGTTAG+TGG | + | chr2_3:3371793-3371812 | Msa0271850:intron | 40.0% | |
GCACTATTGTTAGTGGTATC+TGG | + | chr2_3:3371800-3371819 | Msa0271850:intron | 40.0% | |
! | TTTTGTCCGATTCCATTGAG+TGG | + | chr2_3:3371845-3371864 | Msa0271850:intron | 40.0% |
!!! | TATGGTCCTCTGCTTTTTCA+TGG | + | chr2_3:3371923-3371942 | Msa0271850:intron | 40.0% |
CAGTGTTTGAGTATGAGTTG+TGG | + | chr2_3:3371977-3371996 | Msa0271850:intron | 40.0% | |
! | GAATAGTAACTGGTTCCCTT+CGG | + | chr2_3:3372340-3372359 | Msa0271850:CDS | 40.0% |
TGGCATGGGAATCTTTCAAA+TGG | + | chr2_3:3372542-3372561 | Msa0271850:CDS | 40.0% | |
TACCTCCACATTTCGATTGT+CGG | + | chr2_3:3372669-3372688 | Msa0271850:CDS | 40.0% | |
ATGTCGTTGTGTCATCAAAG+TGG | + | chr2_3:3372695-3372714 | Msa0271850:CDS | 40.0% | |
TGGATTCTTGTCACCAATAG+AGG | + | chr2_3:3372715-3372734 | Msa0271850:CDS | 40.0% | |
AAAACACATTCCAGCAGAGT+TGG | - | chr2_3:3372805-3372824 | None:intergenic | 40.0% | |
TTGGTACATGGCCGATATAA+TGG | - | chr2_3:3372890-3372909 | None:intergenic | 40.0% | |
! | AAAAAGGTGTGAAGGGGAAT+TGG | - | chr2_3:3372909-3372928 | None:intergenic | 40.0% |
!! | GTTTTGTATACGAGGCACTT+TGG | - | chr2_3:3372968-3372987 | None:intergenic | 40.0% |
AAGCCATCACATTTAACCCA+GGG | - | chr2_3:3373122-3373141 | None:intergenic | 40.0% | |
TAGACTCCTATCATGTGTAC+AGG | + | chr2_3:3373309-3373328 | Msa0271850:intron | 40.0% | |
AGAAAAGAAAAGAGGGGACA+AGG | - | chr2_3:3373350-3373369 | None:intergenic | 40.0% | |
TAAAATGTCTACCCAGTACC+CGG | + | chr2_3:3373405-3373424 | Msa0271850:intron | 40.0% | |
CCATATAAATAACCGGGTAC+TGG | - | chr2_3:3373420-3373439 | None:intergenic | 40.0% | |
CCAGTACCCGGTTATTTATA+TGG | + | chr2_3:3373417-3373436 | Msa0271850:intron | 40.0% | |
! | GACTCTTCAATTTTCTCCAG+AGG | - | chr2_3:3373775-3373794 | None:intergenic | 40.0% |
TCCAAACAAGATAGCACTTG+AGG | + | chr2_3:3373801-3373820 | Msa0271850:CDS | 40.0% | |
TCCTCAAGTGCTATCTTGTT+TGG | - | chr2_3:3373805-3373824 | None:intergenic | 40.0% | |
ATTCTCAAGAGTCAAACGGT+GGG | + | chr2_3:3373893-3373912 | Msa0271850:CDS | 40.0% | |
AGAGTCAAATGATGTGCATG+AGG | + | chr2_3:3373945-3373964 | Msa0271850:CDS | 40.0% | |
CTCAGGAACGGAATGATAAA+AGG | + | chr2_3:3374106-3374125 | Msa0271850:CDS | 40.0% | |
TAACTCTGAACTGAAGACTC+AGG | + | chr2_3:3374278-3374297 | Msa0271850:three_prime_UTR | 40.0% | |
!!! | TAGTTTTGGTGGGACTAGAA+AGG | + | chr2_3:3374440-3374459 | Msa0271850:three_prime_UTR | 40.0% |
TCGAATTTCCTATAGGACAC+TGG | - | chr2_3:3374499-3374518 | None:intergenic | 40.0% | |
! | CCATGATTTTTCACCCATTC+TGG | - | chr2_3:3374563-3374582 | None:intergenic | 40.0% |
CCAGAATGGGTGAAAAATCA+TGG | + | chr2_3:3374560-3374579 | Msa0271850:three_prime_UTR | 40.0% | |
! | GCTCTTTTTGACCAAACGAT+TGG | + | chr2_3:3374594-3374613 | Msa0271850:three_prime_UTR | 40.0% |
! | GCGTTCTGATGATGATGATG+AGG | + | chr2_3:3363418-3363437 | Msa0271850:CDS | 45.0% |
! | TGATGATGATGAGGACGATG+AGG | + | chr2_3:3363427-3363446 | Msa0271850:CDS | 45.0% |
! | CTTTGAAGATCACCTAGTGG+AGG | + | chr2_3:3363623-3363642 | Msa0271850:CDS | 45.0% |
AAGCTGACCAAACCAATTGC+AGG | - | chr2_3:3364209-3364228 | None:intergenic | 45.0% | |
GTGATCTAATCTGGTAGCTC+AGG | + | chr2_3:3364231-3364250 | Msa0271850:intron | 45.0% | |
GCACATTGACAAGAGCAACT+AGG | - | chr2_3:3364465-3364484 | None:intergenic | 45.0% | |
AGTTGCTCTTGTCAATGTGC+AGG | + | chr2_3:3364465-3364484 | Msa0271850:intron | 45.0% | |
TGTGCAGGATGACAACGAAA+AGG | + | chr2_3:3364480-3364499 | Msa0271850:intron | 45.0% | |
AGGCCCAACAAACAATCAAC+TGG | + | chr2_3:3364592-3364611 | Msa0271850:CDS | 45.0% | |
GGCCCAACAAACAATCAACT+GGG | + | chr2_3:3364593-3364612 | Msa0271850:CDS | 45.0% | |
TGCTTACAAGTGACACTAGC+AGG | + | chr2_3:3364902-3364921 | Msa0271850:intron | 45.0% | |
!! | TGGATTTAGCCTCTGGTTCT+CGG | + | chr2_3:3365088-3365107 | Msa0271850:intron | 45.0% |
TTGGGCCATACTATGTTGGT+AGG | - | chr2_3:3366003-3366022 | None:intergenic | 45.0% | |
TACCAACATAGTATGGCCCA+AGG | + | chr2_3:3366002-3366021 | Msa0271850:intron | 45.0% | |
ACCAACATAGTATGGCCCAA+GGG | + | chr2_3:3366003-3366022 | Msa0271850:intron | 45.0% | |
GGTCCTTAACCATTTGGTCT+GGG | + | chr2_3:3366037-3366056 | Msa0271850:intron | 45.0% | |
GTCCTTAACCATTTGGTCTG+GGG | + | chr2_3:3366038-3366057 | Msa0271850:intron | 45.0% | |
AACCCCAGACCAAATGGTTA+AGG | - | chr2_3:3366043-3366062 | None:intergenic | 45.0% | |
! | AGGACAGTTTGTTCTCTCAG+AGG | + | chr2_3:3366464-3366483 | Msa0271850:CDS | 45.0% |
ACCAGAATTTCTTGAGCCCT+TGG | + | chr2_3:3366698-3366717 | Msa0271850:intron | 45.0% | |
ACCAAGGGCTCAAGAAATTC+TGG | - | chr2_3:3366702-3366721 | None:intergenic | 45.0% | |
AAAAACCAAGCTTCACGGAG+TGG | - | chr2_3:3367035-3367054 | None:intergenic | 45.0% | |
! | GTGTCATTGACGAATGTCTC+TGG | - | chr2_3:3367285-3367304 | None:intergenic | 45.0% |
GCTGAATCTGGTGTATCTGT+AGG | + | chr2_3:3367598-3367617 | Msa0271850:intron | 45.0% | |
!! | TGCCATCAGAAGCACTTTCT+GGG | - | chr2_3:3367716-3367735 | None:intergenic | 45.0% |
! | CTTTTCAACGCGTGCGTAAA+TGG | + | chr2_3:3367742-3367761 | Msa0271850:CDS | 45.0% |
GGCTCTTACCTGTAGTTTAC+GGG | - | chr2_3:3367810-3367829 | None:intergenic | 45.0% | |
! | ATCTTGATGGCAGTCTTCAC+TGG | + | chr2_3:3367896-3367915 | Msa0271850:intron | 45.0% |
GATCGTCATTTGTCATCCTG+GGG | + | chr2_3:3367924-3367943 | Msa0271850:CDS | 45.0% | |
! | GTGCAAGATGCAAGGTACTT+TGG | - | chr2_3:3368064-3368083 | None:intergenic | 45.0% |
AGTACCTTGCATCTTGCACA+TGG | + | chr2_3:3368065-3368084 | Msa0271850:CDS | 45.0% | |
TTGCACATGGACTCCTTGAA+AGG | + | chr2_3:3368078-3368097 | Msa0271850:CDS | 45.0% | |
GGCTATCAGTAAGCTACCTT+TGG | - | chr2_3:3368131-3368150 | None:intergenic | 45.0% | |
AATTCGGGGGTCTGATAACA+AGG | + | chr2_3:3368192-3368211 | Msa0271850:intron | 45.0% | |
GCTCAAATTTGGGCCATCAA+AGG | - | chr2_3:3368270-3368289 | None:intergenic | 45.0% | |
AAAGCAATAGAAGGAGCCAG+TGG | - | chr2_3:3368595-3368614 | None:intergenic | 45.0% | |
AGACGCGTGAAAGCAATAGA+AGG | - | chr2_3:3368604-3368623 | None:intergenic | 45.0% | |
GAAGAAACGTGAGGGGAATA+GGG | - | chr2_3:3368785-3368804 | None:intergenic | 45.0% | |
TGAAGAAACGTGAGGGGAAT+AGG | - | chr2_3:3368786-3368805 | None:intergenic | 45.0% | |
CAATGCAAGCATCTCAGACA+GGG | - | chr2_3:3368965-3368984 | None:intergenic | 45.0% | |
TCAATGCAAGCATCTCAGAC+AGG | - | chr2_3:3368966-3368985 | None:intergenic | 45.0% | |
CATTGAGAGAGATGCAGAAG+TGG | + | chr2_3:3368980-3368999 | Msa0271850:intron | 45.0% | |
AATGCATACAGGGTTGGAGA+TGG | + | chr2_3:3369232-3369251 | Msa0271850:intron | 45.0% | |
AGAAAGAGAAAGGTTCAGGG+AGG | - | chr2_3:3369640-3369659 | None:intergenic | 45.0% | |
GGGCAATTTCCCAGTTGATT+AGG | + | chr2_3:3370087-3370106 | Msa0271850:intron | 45.0% | |
GTAGGGGAAGAAGAAGAGAA+AGG | + | chr2_3:3370145-3370164 | Msa0271850:intron | 45.0% | |
GAAGAAGAGAAAGGCGATGT+TGG | + | chr2_3:3370154-3370173 | Msa0271850:intron | 45.0% | |
AGAAGCCAAACACACATGCT+TGG | + | chr2_3:3370197-3370216 | Msa0271850:intron | 45.0% | |
ATGCTTGGATATTGTGGACG+AGG | + | chr2_3:3370212-3370231 | Msa0271850:intron | 45.0% | |
! | TAGAGGGCATATCAAGTGAG+AGG | - | chr2_3:3370321-3370340 | None:intergenic | 45.0% |
GCACCCACCTAAAAACACTA+AGG | + | chr2_3:3370370-3370389 | Msa0271850:intron | 45.0% | |
!! | TGTTAACTTGCACCCACCTA+AGG | - | chr2_3:3370361-3370380 | None:intergenic | 45.0% |
! | TCACTCGCTTTCAGTCTTGT+GGG | + | chr2_3:3370875-3370894 | Msa0271850:intron | 45.0% |
!! | AGAAAGTGTTCCTGTACCAC+GGG | - | chr2_3:3370921-3370940 | None:intergenic | 45.0% |
GGCTGGAACAAGCAAAGAAA+TGG | - | chr2_3:3370968-3370987 | None:intergenic | 45.0% | |
TCTCTTTCCATTCTTCACGC+AGG | - | chr2_3:3371404-3371423 | None:intergenic | 45.0% | |
GAAAGAGAGACACCCCAATA+CGG | + | chr2_3:3371416-3371435 | Msa0271850:CDS | 45.0% | |
! | CTTTGTGGAACGTTTTCTGG+AGG | + | chr2_3:3371619-3371638 | Msa0271850:CDS | 45.0% |
ATCGTCAAGAGATTGGGAGA+GGG | - | chr2_3:3372155-3372174 | None:intergenic | 45.0% | |
AATCGTCAAGAGATTGGGAG+AGG | - | chr2_3:3372156-3372175 | None:intergenic | 45.0% | |
TTTGCCACGGCAATCAATAG+GGG | - | chr2_3:3372441-3372460 | None:intergenic | 45.0% | |
CTTTGCCACGGCAATCAATA+GGG | - | chr2_3:3372442-3372461 | None:intergenic | 45.0% | |
ACTTTGTGCTCGATAACACC+AGG | - | chr2_3:3372482-3372501 | None:intergenic | 45.0% | |
!! | TGGTGTTATCGAGCACAAAG+TGG | + | chr2_3:3372481-3372500 | Msa0271850:intron | 45.0% |
AAAGTGGAAGCAGATTCCTC+TGG | + | chr2_3:3372497-3372516 | Msa0271850:intron | 45.0% | |
CTCTTACAGGTGAAACAGGT+CGG | - | chr2_3:3372592-3372611 | None:intergenic | 45.0% | |
GAACATGATGCAGCTCTTAC+AGG | - | chr2_3:3372605-3372624 | None:intergenic | 45.0% | |
GCATCATGTTCAAGAGATCC+TGG | + | chr2_3:3372614-3372633 | Msa0271850:CDS | 45.0% | |
ATCTGCCGACAATCGAAATG+TGG | - | chr2_3:3372677-3372696 | None:intergenic | 45.0% | |
GTAGCATATTCCAACTCTGC+TGG | + | chr2_3:3372792-3372811 | Msa0271850:intron | 45.0% | |
! | CTCTGCTGGAATGTGTTTTC+AGG | + | chr2_3:3372806-3372825 | Msa0271850:intron | 45.0% |
ATCTACCTTGAGTGAGAACC+TGG | + | chr2_3:3372847-3372866 | Msa0271850:intron | 45.0% | |
TCTACCTTGAGTGAGAACCT+GGG | + | chr2_3:3372848-3372867 | Msa0271850:intron | 45.0% | |
TGTGAAGGGGAATTGGTACA+TGG | - | chr2_3:3372902-3372921 | None:intergenic | 45.0% | |
CAAGCCATCACATTTAACCC+AGG | - | chr2_3:3373123-3373142 | None:intergenic | 45.0% | |
ATGCAGGAAACGGAAGAGTT+TGG | + | chr2_3:3373553-3373572 | Msa0271850:intron | 45.0% | |
GAGAGAGCAAATTCTCAAGC+AGG | + | chr2_3:3373598-3373617 | Msa0271850:CDS | 45.0% | |
!! | TCAAGCAGGCATTTTGGCAT+CGG | + | chr2_3:3373612-3373631 | Msa0271850:CDS | 45.0% |
AGCATCAGAAACAACACAGC+AGG | + | chr2_3:3373672-3373691 | Msa0271850:CDS | 45.0% | |
GCATCAGAAACAACACAGCA+GGG | + | chr2_3:3373673-3373692 | Msa0271850:CDS | 45.0% | |
TTCTCTTGAAGATCAGCCTC+TGG | + | chr2_3:3373756-3373775 | Msa0271850:CDS | 45.0% | |
GATTCTCAAGAGTCAAACGG+TGG | + | chr2_3:3373892-3373911 | Msa0271850:CDS | 45.0% | |
CAGAAGCTTACGAGTGAAAC+AGG | + | chr2_3:3374129-3374148 | Msa0271850:CDS | 45.0% | |
AAGCTTACGAGTGAAACAGG+TGG | + | chr2_3:3374132-3374151 | Msa0271850:CDS | 45.0% | |
GCAGCAGCAGAAAATGTTAC+TGG | + | chr2_3:3374227-3374246 | Msa0271850:three_prime_UTR | 45.0% | |
ACAAATCAAGGGCCACATGT+TGG | - | chr2_3:3374337-3374356 | None:intergenic | 45.0% | |
TTTGGTGGGACTAGAAAGGT+AGG | + | chr2_3:3374444-3374463 | Msa0271850:three_prime_UTR | 45.0% | |
!! | TAAAAAAAAATAAAAATTGT+AGG | - | chr2_3:3367831-3367850 | None:intergenic | 5.0% |
!! | ATATATATATATATATATAG+GGG | + | chr2_3:3368418-3368437 | Msa0271850:intron | 5.0% |
!! | ATATATATATATATATATAG+GGG | - | chr2_3:3368418-3368437 | None:intergenic | 5.0% |
!! | ATATATATATATATATATAG+AGG | + | chr2_3:3368418-3368437 | Msa0271850:intron | 5.0% |
!!! | TAAACTTTATTTTAATTAAA+AGG | - | chr2_3:3370490-3370509 | None:intergenic | 5.0% |
!! | TATATATATATATATATATG+GGG | - | chr2_3:3370595-3370614 | None:intergenic | 5.0% |
CAGCAGAATCATCCTCCACT+AGG | - | chr2_3:3363638-3363657 | None:intergenic | 50.0% | |
GCAGGATGACAACGAAAAGG+TGG | + | chr2_3:3364483-3364502 | Msa0271850:intron | 50.0% | |
! | TGTTGGGCCTTCGAGTTTCA+GGG | - | chr2_3:3364582-3364601 | None:intergenic | 50.0% |
! | TTGTTGGGCCTTCGAGTTTC+AGG | - | chr2_3:3364583-3364602 | None:intergenic | 50.0% |
CTTCAAAAGCCGAGAACCAG+AGG | - | chr2_3:3365100-3365119 | None:intergenic | 50.0% | |
!!! | CTCTGGTTCTCGGCTTTTGA+AGG | + | chr2_3:3365098-3365117 | Msa0271850:intron | 50.0% |
ATATTGGTCCAGGGCAGAAG+AGG | + | chr2_3:3365403-3365422 | Msa0271850:CDS | 50.0% | |
! | TTTGATAGCCTCTTCTGCCC+TGG | - | chr2_3:3365414-3365433 | None:intergenic | 50.0% |
CCAACATAGTATGGCCCAAG+GGG | + | chr2_3:3366004-3366023 | Msa0271850:intron | 50.0% | |
GACCCAAGTATCTACCCCTT+GGG | - | chr2_3:3366021-3366040 | None:intergenic | 50.0% | |
GGGTCCTTAACCATTTGGTC+TGG | + | chr2_3:3366036-3366055 | Msa0271850:intron | 50.0% | |
!! | TTTTCCATATGCACCGGCCA+GGG | - | chr2_3:3366070-3366089 | None:intergenic | 50.0% |
!! | TTTTTCCATATGCACCGGCC+AGG | - | chr2_3:3366071-3366090 | None:intergenic | 50.0% |
GTATCATTCGAGCGCAACTG+TGG | - | chr2_3:3366154-3366173 | None:intergenic | 50.0% | |
TAAACTGCCCACTGATGAGC+AGG | + | chr2_3:3367632-3367651 | Msa0271850:CDS | 50.0% | |
AACCTCTCCTGCTCATCAGT+GGG | - | chr2_3:3367642-3367661 | None:intergenic | 50.0% | |
AAACCTCTCCTGCTCATCAG+TGG | - | chr2_3:3367643-3367662 | None:intergenic | 50.0% | |
!! | GACCCAGAAAGTGCTTCTGA+TGG | + | chr2_3:3367711-3367730 | Msa0271850:CDS | 50.0% |
!! | CTGCCATCAGAAGCACTTTC+TGG | - | chr2_3:3367717-3367736 | None:intergenic | 50.0% |
GAGTCCATGTGCAAGATGCA+AGG | - | chr2_3:3368072-3368091 | None:intergenic | 50.0% | |
!! | ATGACATGGTGGTGGTTCAC+CGG | - | chr2_3:3368683-3368702 | None:intergenic | 50.0% |
ATGACTGAGCGATGACATGG+TGG | - | chr2_3:3368694-3368713 | None:intergenic | 50.0% | |
TGCATGACTGAGCGATGACA+TGG | - | chr2_3:3368697-3368716 | None:intergenic | 50.0% | |
TTCCCTTCCATCACCAGTTC+CGG | + | chr2_3:3368724-3368743 | Msa0271850:intron | 50.0% | |
TGAGAGAGATGCAGAAGTGG+TGG | + | chr2_3:3368983-3369002 | Msa0271850:intron | 50.0% | |
! | AGAGATGCAGAAGTGGTGGA+AGG | + | chr2_3:3368987-3369006 | Msa0271850:intron | 50.0% |
! | ATGCAGAAGTGGTGGAAGGA+TGG | + | chr2_3:3368991-3369010 | Msa0271850:intron | 50.0% |
! | TGCAGAAGTGGTGGAAGGAT+GGG | + | chr2_3:3368992-3369011 | Msa0271850:intron | 50.0% |
!! | CTCTTGTTGTTCTCGTTCGC+CGG | - | chr2_3:3369038-3369057 | None:intergenic | 50.0% |
GGCGAACGAGAACAACAAGA+GGG | + | chr2_3:3369037-3369056 | Msa0271850:intron | 50.0% | |
GCGAACGAGAACAACAAGAG+GGG | + | chr2_3:3369038-3369057 | Msa0271850:intron | 50.0% | |
CGAACGAGAACAACAAGAGG+GGG | + | chr2_3:3369039-3369058 | Msa0271850:intron | 50.0% | |
GATGTTGGGAGAAGAGAGAG+CGG | + | chr2_3:3370169-3370188 | Msa0271850:intron | 50.0% | |
TGTGGACGAGGTGCACTATA+AGG | + | chr2_3:3370224-3370243 | Msa0271850:intron | 50.0% | |
AAATGCACCAACACCCAGTC+CGG | + | chr2_3:3370708-3370727 | Msa0271850:intron | 50.0% | |
CCAACTAAATGGCAATGCCC+AGG | - | chr2_3:3370756-3370775 | None:intergenic | 50.0% | |
! | CCTGGGCATTGCCATTTAGT+TGG | + | chr2_3:3370753-3370772 | Msa0271850:intron | 50.0% |
GTCACTCGCTTTCAGTCTTG+TGG | + | chr2_3:3370874-3370893 | Msa0271850:intron | 50.0% | |
! | CACTCGCTTTCAGTCTTGTG+GGG | + | chr2_3:3370876-3370895 | Msa0271850:intron | 50.0% |
! | ACTCGCTTTCAGTCTTGTGG+GGG | + | chr2_3:3370877-3370896 | Msa0271850:intron | 50.0% |
! | TTTCAGTCTTGTGGGGGAAG+TGG | + | chr2_3:3370883-3370902 | Msa0271850:intron | 50.0% |
! | TTCAGTCTTGTGGGGGAAGT+GGG | + | chr2_3:3370884-3370903 | Msa0271850:intron | 50.0% |
CCACTCTTAAGGGTAGGTGA+CGG | - | chr2_3:3370989-3371008 | None:intergenic | 50.0% | |
CAGTCACCAGCCACTCTTAA+GGG | - | chr2_3:3370999-3371018 | None:intergenic | 50.0% | |
!! | CATCAACAGTGACGGGTTGT+CGG | - | chr2_3:3371033-3371052 | None:intergenic | 50.0% |
ACAGCTACCTGCGTGAAGAA+TGG | + | chr2_3:3371394-3371413 | Msa0271850:intron | 50.0% | |
GTTGCGGTTCATCTCACTAG+AGG | + | chr2_3:3371467-3371486 | Msa0271850:CDS | 50.0% | |
TGAGGCAGCTGGGGAAAAAA+GGG | - | chr2_3:3371560-3371579 | None:intergenic | 50.0% | |
ATTATCCTGCTGAGGCAGCT+GGG | - | chr2_3:3371570-3371589 | None:intergenic | 50.0% | |
AATTATCCTGCTGAGGCAGC+TGG | - | chr2_3:3371571-3371590 | None:intergenic | 50.0% | |
TCAAGAGATTGGGAGAGGGA+GGG | - | chr2_3:3372151-3372170 | None:intergenic | 50.0% | |
TTGCCACGGCAATCAATAGG+GGG | - | chr2_3:3372440-3372459 | None:intergenic | 50.0% | |
CCTTTGCCACGGCAATCAAT+AGG | - | chr2_3:3372443-3372462 | None:intergenic | 50.0% | |
! | CCTATTGATTGCCGTGGCAA+AGG | + | chr2_3:3372440-3372459 | Msa0271850:CDS | 50.0% |
ACACCAGGAAGTTCAGAGAG+AGG | - | chr2_3:3372467-3372486 | None:intergenic | 50.0% | |
CTAGCTGTTACCCTGGTATG+TGG | + | chr2_3:3372522-3372541 | Msa0271850:CDS | 50.0% | |
TGTTACCCTGGTATGTGGCA+TGG | + | chr2_3:3372527-3372546 | Msa0271850:CDS | 50.0% | |
GTTACCCTGGTATGTGGCAT+GGG | + | chr2_3:3372528-3372547 | Msa0271850:CDS | 50.0% | |
GATTCCCATGCCACATACCA+GGG | - | chr2_3:3372535-3372554 | None:intergenic | 50.0% | |
AGATTCCCATGCCACATACC+AGG | - | chr2_3:3372536-3372555 | None:intergenic | 50.0% | |
GCAGCTCTTACAGGTGAAAC+AGG | - | chr2_3:3372596-3372615 | None:intergenic | 50.0% | |
TGCCGACAATCGAAATGTGG+AGG | - | chr2_3:3372674-3372693 | None:intergenic | 50.0% | |
CTACCTTGAGTGAGAACCTG+GGG | + | chr2_3:3372849-3372868 | Msa0271850:intron | 50.0% | |
AAACCCCAGGTTCTCACTCA+AGG | - | chr2_3:3372855-3372874 | None:intergenic | 50.0% | |
AGTGAGAACCTGGGGTTTCA+TGG | + | chr2_3:3372857-3372876 | Msa0271850:intron | 50.0% | |
GATCTCAACCATGAAACCCC+AGG | - | chr2_3:3372868-3372887 | None:intergenic | 50.0% | |
CTTAAGCTGTTGTGCACCCT+GGG | + | chr2_3:3373103-3373122 | Msa0271850:intron | 50.0% | |
GCACCCTGGGTTAAATGTGA+TGG | + | chr2_3:3373116-3373135 | Msa0271850:intron | 50.0% | |
!! | CTCGAGTTTGAGTGGGTTGT+TGG | - | chr2_3:3373146-3373165 | None:intergenic | 50.0% |
CGTTCCTGAGATTCAGATGC+CGG | - | chr2_3:3374096-3374115 | None:intergenic | 50.0% | |
CGGCATCTGAATCTCAGGAA+CGG | + | chr2_3:3374094-3374113 | Msa0271850:CDS | 50.0% | |
TTGTACATCCTGCAGATGCG+AGG | - | chr2_3:3374392-3374411 | None:intergenic | 50.0% | |
AGCAGCTCCCTGAAACTCGA+AGG | + | chr2_3:3364572-3364591 | Msa0271850:CDS | 55.0% | |
CCCCTTGGGCCATACTATGT+TGG | - | chr2_3:3366007-3366026 | None:intergenic | 55.0% | |
TGGCCCAAGGGGTAGATACT+TGG | + | chr2_3:3366015-3366034 | Msa0271850:intron | 55.0% | |
GGCCCAAGGGGTAGATACTT+GGG | + | chr2_3:3366016-3366035 | Msa0271850:intron | 55.0% | |
GGACCCAAGTATCTACCCCT+TGG | - | chr2_3:3366022-3366041 | None:intergenic | 55.0% | |
GGATCGAACCCCAGACCAAA+TGG | - | chr2_3:3366049-3366068 | None:intergenic | 55.0% | |
ACAGCATCAGGTTCCCCCTT+TGG | - | chr2_3:3367228-3367247 | None:intergenic | 55.0% | |
AACGCGTGCGTAAATGGACC+AGG | + | chr2_3:3367748-3367767 | Msa0271850:CDS | 55.0% | |
CGTCATTTGTCATCCTGGGG+AGG | + | chr2_3:3367927-3367946 | Msa0271850:CDS | 55.0% | |
!! | GAAGAGATGGTGGAGAGTGG+GGG | - | chr2_3:3368641-3368660 | None:intergenic | 55.0% |
!! | GGAAGAGATGGTGGAGAGTG+GGG | - | chr2_3:3368642-3368661 | None:intergenic | 55.0% |
!! | CGGAAGAGATGGTGGAGAGT+GGG | - | chr2_3:3368643-3368662 | None:intergenic | 55.0% |
CCACTCTCCACCATCTCTTC+CGG | + | chr2_3:3368641-3368660 | Msa0271850:intron | 55.0% | |
! | TGGTTAGCCGGAAGAGATGG+TGG | - | chr2_3:3368651-3368670 | None:intergenic | 55.0% |
! | TGGTGGTTAGCCGGAAGAGA+TGG | - | chr2_3:3368654-3368673 | None:intergenic | 55.0% |
CGGTAGACATGGTGGTTAGC+CGG | - | chr2_3:3368663-3368682 | None:intergenic | 55.0% | |
CGGCTAACCACCATGTCTAC+CGG | + | chr2_3:3368661-3368680 | Msa0271850:intron | 55.0% | |
TGGTTCACCGGTAGACATGG+TGG | - | chr2_3:3368671-3368690 | None:intergenic | 55.0% | |
TGGTGGTTCACCGGTAGACA+TGG | - | chr2_3:3368674-3368693 | None:intergenic | 55.0% | |
ACTGAGCGATGACATGGTGG+TGG | - | chr2_3:3368691-3368710 | None:intergenic | 55.0% | |
!! | CACCGGAACTGGTGATGGAA+GGG | - | chr2_3:3368729-3368748 | None:intergenic | 55.0% |
!! | TCACCGGAACTGGTGATGGA+AGG | - | chr2_3:3368730-3368749 | None:intergenic | 55.0% |
!! | ACCCTTGGTGGTGGAAGGTT+GGG | - | chr2_3:3368754-3368773 | None:intergenic | 55.0% |
ATCTCAGACAGGGTCGTCAC+CGG | - | chr2_3:3368955-3368974 | None:intergenic | 55.0% | |
CAAACAACCCATGATCCCGC+CGG | + | chr2_3:3369016-3369035 | Msa0271850:intron | 55.0% | |
! | TTGTTGTTCTCGTTCGCCGG+CGG | - | chr2_3:3369035-3369054 | None:intergenic | 55.0% |
CGGCGAACGAGAACAACAAG+AGG | + | chr2_3:3369036-3369055 | Msa0271850:intron | 55.0% | |
ACGAGAACAACAAGAGGGGG+AGG | + | chr2_3:3369042-3369061 | Msa0271850:intron | 55.0% | |
! | AACTCTACCGGACTGGGTGT+TGG | - | chr2_3:3370718-3370737 | None:intergenic | 55.0% |
CTAAATGGCAATGCCCAGGC+TGG | - | chr2_3:3370752-3370771 | None:intergenic | 55.0% | |
GTGTTCCTGTACCACGGGAA+TGG | - | chr2_3:3370916-3370935 | None:intergenic | 55.0% | |
! | TCTTAAGGGTAGGTGACGGC+TGG | - | chr2_3:3370985-3371004 | None:intergenic | 55.0% |
CCGTCACCTACCCTTAAGAG+TGG | + | chr2_3:3370986-3371005 | Msa0271850:intron | 55.0% | |
CACCTACCCTTAAGAGTGGC+TGG | + | chr2_3:3370990-3371009 | Msa0271850:intron | 55.0% | |
CACCAGCCACTCTTAAGGGT+AGG | - | chr2_3:3370995-3371014 | None:intergenic | 55.0% | |
CCAGTCACCAGCCACTCTTA+AGG | - | chr2_3:3371000-3371019 | None:intergenic | 55.0% | |
CCTTAAGAGTGGCTGGTGAC+TGG | + | chr2_3:3370997-3371016 | Msa0271850:intron | 55.0% | |
!! | GACGGGTTGTCGGATGGAAT+TGG | - | chr2_3:3371023-3371042 | None:intergenic | 55.0% |
!! | AACAGTGACGGGTTGTCGGA+TGG | - | chr2_3:3371029-3371048 | None:intergenic | 55.0% |
AGAGAGACACCCCAATACGG+CGG | + | chr2_3:3371419-3371438 | Msa0271850:CDS | 55.0% | |
GCTGGGGAAAAAAGGGGGTA+AGG | - | chr2_3:3371553-3371572 | None:intergenic | 55.0% | |
AGGCAGCTGGGGAAAAAAGG+GGG | - | chr2_3:3371558-3371577 | None:intergenic | 55.0% | |
GAGGCAGCTGGGGAAAAAAG+GGG | - | chr2_3:3371559-3371578 | None:intergenic | 55.0% | |
CTGAGGCAGCTGGGGAAAAA+AGG | - | chr2_3:3371561-3371580 | None:intergenic | 55.0% | |
TTATCCTGCTGAGGCAGCTG+GGG | - | chr2_3:3371569-3371588 | None:intergenic | 55.0% | |
AAGAGATTGGGAGAGGGAGG+GGG | - | chr2_3:3372149-3372168 | None:intergenic | 55.0% | |
CAAGAGATTGGGAGAGGGAG+GGG | - | chr2_3:3372150-3372169 | None:intergenic | 55.0% | |
GTCAAGAGATTGGGAGAGGG+AGG | - | chr2_3:3372152-3372171 | None:intergenic | 55.0% | |
! | TAACTGGTTCCCTTCGGACG+AGG | + | chr2_3:3372346-3372365 | Msa0271850:CDS | 55.0% |
TCAGAGAAGCCTCGTCCGAA+GGG | - | chr2_3:3372358-3372377 | None:intergenic | 55.0% | |
CAGAGAGAGGACCTTTGCCA+CGG | - | chr2_3:3372454-3372473 | None:intergenic | 55.0% | |
GGTCCTCTCTCTGAACTTCC+TGG | + | chr2_3:3372461-3372480 | Msa0271850:CDS | 55.0% | |
AGGGTAACAGCTAGCTCCAG+AGG | - | chr2_3:3372516-3372535 | None:intergenic | 55.0% | |
! | TCTGGAGCTAGCTGTTACCC+TGG | + | chr2_3:3372515-3372534 | Msa0271850:CDS | 55.0% |
GCTTAAGCTGTTGTGCACCC+TGG | + | chr2_3:3373102-3373121 | Msa0271850:intron | 55.0% | |
AGCTGGCAAGAGAGAACCAC+CGG | + | chr2_3:3374074-3374093 | Msa0271850:CDS | 55.0% | |
ACCACCGGCATCTGAATCTC+AGG | + | chr2_3:3374089-3374108 | Msa0271850:CDS | 55.0% | |
TCCTGAGATTCAGATGCCGG+TGG | - | chr2_3:3374093-3374112 | None:intergenic | 55.0% | |
ACGAGTGAAACAGGTGGTCC+AGG | + | chr2_3:3374138-3374157 | Msa0271850:CDS | 55.0% | |
! | TTGGTCTGGGGTTCGATCCC+TGG | + | chr2_3:3366050-3366069 | Msa0271850:intron | 60.0% |
ACCAAGCTTCACGGAGTGGC+AGG | - | chr2_3:3367031-3367050 | None:intergenic | 60.0% | |
TGCCCACTGATGAGCAGGAG+AGG | + | chr2_3:3367637-3367656 | Msa0271850:CDS | 60.0% | |
!! | CCGGAAGAGATGGTGGAGAG+TGG | - | chr2_3:3368644-3368663 | None:intergenic | 60.0% |
AAGGTTGGGGTCACCGGAAC+TGG | - | chr2_3:3368740-3368759 | None:intergenic | 60.0% | |
TGGTGGAAGGTTGGGGTCAC+CGG | - | chr2_3:3368746-3368765 | None:intergenic | 60.0% | |
ACCCCAACCTTCCACCACCA+AGG | + | chr2_3:3368749-3368768 | Msa0271850:intron | 60.0% | |
!! | CCCTTGGTGGTGGAAGGTTG+GGG | - | chr2_3:3368753-3368772 | None:intergenic | 60.0% |
CCCCAACCTTCCACCACCAA+GGG | + | chr2_3:3368750-3368769 | Msa0271850:intron | 60.0% | |
!! | GACCCTTGGTGGTGGAAGGT+TGG | - | chr2_3:3368755-3368774 | None:intergenic | 60.0% |
AATAGGGCGACGGTGACCCT+TGG | - | chr2_3:3368769-3368788 | None:intergenic | 60.0% | |
ACGTGAGGGGAATAGGGCGA+CGG | - | chr2_3:3368779-3368798 | None:intergenic | 60.0% | |
TGTTGTTCTCGTTCGCCGGC+GGG | - | chr2_3:3369034-3369053 | None:intergenic | 60.0% | |
GGGGGAGGATGATGAACGTG+CGG | + | chr2_3:3369057-3369076 | Msa0271850:intron | 60.0% | |
GGAGGATGATGAACGTGCGG+CGG | + | chr2_3:3369060-3369079 | Msa0271850:intron | 60.0% | |
GTGCTCCATTCCCGTGGTAC+AGG | + | chr2_3:3370908-3370927 | Msa0271850:intron | 60.0% | |
! | TTTTCCCCAGCTGCCTCAGC+AGG | + | chr2_3:3371562-3371581 | Msa0271850:intron | 60.0% |
CTCAGAGAAGCCTCGTCCGA+AGG | - | chr2_3:3372359-3372378 | None:intergenic | 60.0% | |
! | GCACCCCCTATTGATTGCCG+TGG | + | chr2_3:3372434-3372453 | Msa0271850:CDS | 60.0% |
GTCCAGGTCGACGACTCACA+AGG | + | chr2_3:3374154-3374173 | Msa0271850:CDS | 60.0% | |
CTCCTTGTGAGTCGTCGACC+TGG | - | chr2_3:3374159-3374178 | None:intergenic | 60.0% | |
CAGGTCGACGACTCACAAGG+AGG | + | chr2_3:3374157-3374176 | Msa0271850:CDS | 60.0% | |
! | TCTGGGGTTCGATCCCTGGC+CGG | + | chr2_3:3366054-3366073 | Msa0271850:intron | 65.0% |
CGATCCCTGGCCGGTGCATA+TGG | + | chr2_3:3366063-3366082 | Msa0271850:intron | 65.0% | |
GCCTGCCACTCCGTGAAGCT+TGG | + | chr2_3:3367027-3367046 | Msa0271850:intron | 65.0% | |
CTGAAGGATGGCACCTCCCC+AGG | - | chr2_3:3367943-3367962 | None:intergenic | 65.0% | |
!! | GGGGAGGTGCCATCCTTCAG+AGG | + | chr2_3:3367943-3367962 | Msa0271850:CDS | 65.0% |
GGGGTCACCGGAACTGGTGA+TGG | - | chr2_3:3368734-3368753 | None:intergenic | 65.0% | |
!! | CGGTGACCCTTGGTGGTGGA+AGG | - | chr2_3:3368759-3368778 | None:intergenic | 65.0% |
GCGTGCAATGCGGCTGTCGA+CGG | - | chr2_3:3368933-3368952 | None:intergenic | 65.0% | |
TCGACAGCCGCATTGCACGC+CGG | + | chr2_3:3368933-3368952 | Msa0271850:intron | 65.0% | |
GTCGTCACCGGCGTGCAATG+CGG | - | chr2_3:3368943-3368962 | None:intergenic | 65.0% | |
TCGTTCGCCGGCGGGATCAT+GGG | - | chr2_3:3369026-3369045 | None:intergenic | 65.0% | |
GGTGGTGACAGCGGTTGCAG+TGG | - | chr2_3:3369089-3369108 | None:intergenic | 65.0% | |
GTGGGTGTGCTCCATTCCCG+TGG | + | chr2_3:3370902-3370921 | Msa0271850:intron | 65.0% | |
CTGCAGATGCGAGGCAGCTC+AGG | - | chr2_3:3374383-3374402 | None:intergenic | 65.0% | |
CTGAGCTGCCTCGCATCTGC+AGG | + | chr2_3:3374381-3374400 | Msa0271850:three_prime_UTR | 65.0% | |
GCGACGGTGACCCTTGGTGG+TGG | - | chr2_3:3368763-3368782 | None:intergenic | 70.0% | |
AGGGCGACGGTGACCCTTGG+TGG | - | chr2_3:3368766-3368785 | None:intergenic | 70.0% | |
CTCGTTCGCCGGCGGGATCA+TGG | - | chr2_3:3369027-3369046 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 3363308 | 3374716 | 3363308 | ID=Msa0271850;Name=Msa0271850 |
chr2_3 | mRNA | 3363308 | 3374716 | 3363308 | ID=Msa0271850-mRNA-1;Parent=Msa0271850;Name=Msa0271850-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.8|0.68|1|0.8|0.81|16|513|804 |
chr2_3 | exon | 3363308 | 3363316 | 3363308 | ID=Msa0271850-mRNA-1:exon:1635;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3363407 | 3363509 | 3363407 | ID=Msa0271850-mRNA-1:exon:1636;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3363619 | 3363668 | 3363619 | ID=Msa0271850-mRNA-1:exon:1637;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3364487 | 3364681 | 3364487 | ID=Msa0271850-mRNA-1:exon:1638;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3364751 | 3364910 | 3364751 | ID=Msa0271850-mRNA-1:exon:1639;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3365369 | 3365477 | 3365369 | ID=Msa0271850-mRNA-1:exon:1640;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3366423 | 3366500 | 3366423 | ID=Msa0271850-mRNA-1:exon:1641;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3367194 | 3367325 | 3367194 | ID=Msa0271850-mRNA-1:exon:1642;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3367620 | 3367820 | 3367620 | ID=Msa0271850-mRNA-1:exon:1643;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3367909 | 3367964 | 3367909 | ID=Msa0271850-mRNA-1:exon:1644;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3368040 | 3368133 | 3368040 | ID=Msa0271850-mRNA-1:exon:1645;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3371398 | 3371488 | 3371398 | ID=Msa0271850-mRNA-1:exon:1646;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3371572 | 3371691 | 3371572 | ID=Msa0271850-mRNA-1:exon:1647;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3372338 | 3372482 | 3372338 | ID=Msa0271850-mRNA-1:exon:1648;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3372510 | 3372736 | 3372510 | ID=Msa0271850-mRNA-1:exon:1649;Parent=Msa0271850-mRNA-1 |
chr2_3 | exon | 3373559 | 3374716 | 3373559 | ID=Msa0271850-mRNA-1:exon:1650;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3363308 | 3363316 | 3363308 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3363407 | 3363509 | 3363407 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3363619 | 3363668 | 3363619 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3364487 | 3364681 | 3364487 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3364751 | 3364910 | 3364751 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3365369 | 3365477 | 3365369 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3366423 | 3366500 | 3366423 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3367194 | 3367325 | 3367194 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3367620 | 3367820 | 3367620 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3367909 | 3367964 | 3367909 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3368040 | 3368133 | 3368040 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3371398 | 3371488 | 3371398 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3371572 | 3371691 | 3371572 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3372338 | 3372482 | 3372338 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3372510 | 3372736 | 3372510 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | CDS | 3373559 | 3374203 | 3373559 | ID=Msa0271850-mRNA-1:cds;Parent=Msa0271850-mRNA-1 |
chr2_3 | three_prime_UTR | 3374204 | 3374716 | 3374204 | ID=Msa0271850-mRNA-1:three_prime_utr;Parent=Msa0271850-mRNA-1 |
Gene Sequence |
Protein sequence |