Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190400 | XP_013445165.1 | 94.043 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 4.44e-154 | 437 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190400 | sp|Q9LH79|SWET2_ARATH | 66.094 | 233 | 74 | 3 | 4 | 234 | 6 | 235 | 2.01e-102 | 299 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190400 | G7ZV40 | 94.043 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 2.12e-154 | 437 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa1190400 | 0.804590 | 2.007732e-49 | -8.615850e-47 |
| Msa0003890 | Msa1190400 | 0.807645 | 4.569062e-50 | -8.615850e-47 |
| Msa0017510 | Msa1190400 | 0.877802 | 4.690939e-69 | -8.615850e-47 |
| Msa0021510 | Msa1190400 | 0.805369 | 1.380344e-49 | -8.615850e-47 |
| Msa0028640 | Msa1190400 | 0.829874 | 4.031565e-55 | -8.615850e-47 |
| Msa0028700 | Msa1190400 | 0.804576 | 2.021315e-49 | -8.615850e-47 |
| Msa0037700 | Msa1190400 | 0.804488 | 2.108436e-49 | -8.615850e-47 |
| Msa0046100 | Msa1190400 | 0.804310 | 2.297083e-49 | -8.615850e-47 |
| Msa0047030 | Msa1190400 | 0.800589 | 1.342627e-48 | -8.615850e-47 |
| Msa0050390 | Msa1190400 | 0.807211 | 5.647511e-50 | -8.615850e-47 |
| Msa0074240 | Msa1190400 | 0.817506 | 3.183165e-52 | -8.615850e-47 |
| Msa0076250 | Msa1190400 | 0.809955 | 1.464790e-50 | -8.615850e-47 |
| Msa0086650 | Msa1190400 | 0.810276 | 1.248992e-50 | -8.615850e-47 |
| Msa0089630 | Msa1190400 | 0.841667 | 4.134589e-58 | -8.615850e-47 |
| Msa0094140 | Msa1190400 | 0.805973 | 1.030479e-49 | -8.615850e-47 |
| Msa0101810 | Msa1190400 | -0.823802 | 1.138460e-53 | -8.615850e-47 |
| Msa0107020 | Msa1190400 | 0.808409 | 3.141592e-50 | -8.615850e-47 |
| Msa0110970 | Msa1190400 | 0.832226 | 1.066870e-55 | -8.615850e-47 |
| Msa0116770 | Msa1190400 | 0.821244 | 4.474765e-53 | -8.615850e-47 |
| Msa0610430 | Msa1190400 | 0.807024 | 6.185963e-50 | -8.615850e-47 |
| Msa0623080 | Msa1190400 | 0.815694 | 8.108116e-52 | -8.615850e-47 |
| Msa0650020 | Msa1190400 | 0.815417 | 9.345294e-52 | -8.615850e-47 |
| Msa0657970 | Msa1190400 | 0.826548 | 2.554143e-54 | -8.615850e-47 |
| Msa0661650 | Msa1190400 | 0.814759 | 1.308327e-51 | -8.615850e-47 |
| Msa0661870 | Msa1190400 | 0.801125 | 1.043291e-48 | -8.615850e-47 |
| Msa0669320 | Msa1190400 | 0.809807 | 1.576068e-50 | -8.615850e-47 |
| Msa0673450 | Msa1190400 | 0.802486 | 5.484072e-49 | -8.615850e-47 |
| Msa0673460 | Msa1190400 | 0.801878 | 7.314057e-49 | -8.615850e-47 |
| Msa0674580 | Msa1190400 | 0.810490 | 1.123286e-50 | -8.615850e-47 |
| Msa0677410 | Msa1190400 | 0.807276 | 5.471521e-50 | -8.615850e-47 |
| Msa0696640 | Msa1190400 | 0.825825 | 3.795517e-54 | -8.615850e-47 |
| Msa0698920 | Msa1190400 | 0.802334 | 5.892755e-49 | -8.615850e-47 |
| Msa0701010 | Msa1190400 | 0.801158 | 1.027360e-48 | -8.615850e-47 |
| Msa0731940 | Msa1190400 | 0.806293 | 8.825087e-50 | -8.615850e-47 |
| Msa0735170 | Msa1190400 | 0.812300 | 4.545242e-51 | -8.615850e-47 |
| Msa0743720 | Msa1190400 | 0.865515 | 5.584068e-65 | -8.615850e-47 |
| Msa0745790 | Msa1190400 | 0.817773 | 2.771366e-52 | -8.615850e-47 |
| Msa0749290 | Msa1190400 | 0.810669 | 1.027336e-50 | -8.615850e-47 |
| Msa0760130 | Msa1190400 | 0.800564 | 1.358443e-48 | -8.615850e-47 |
| Msa0786500 | Msa1190400 | 0.804321 | 2.285373e-49 | -8.615850e-47 |
| Msa0787470 | Msa1190400 | 0.817191 | 3.747692e-52 | -8.615850e-47 |
| Msa0793800 | Msa1190400 | 0.809406 | 1.922156e-50 | -8.615850e-47 |
| Msa0801760 | Msa1190400 | 0.809399 | 1.929281e-50 | -8.615850e-47 |
| Msa0802470 | Msa1190400 | -0.809221 | 2.106713e-50 | -8.615850e-47 |
| Msa0810220 | Msa1190400 | 0.805588 | 1.241849e-49 | -8.615850e-47 |
| Msa0822870 | Msa1190400 | 0.819708 | 1.007642e-52 | -8.615850e-47 |
| Msa0832370 | Msa1190400 | 0.805375 | 1.376111e-49 | -8.615850e-47 |
| Msa0133130 | Msa1190400 | 0.811856 | 5.679327e-51 | -8.615850e-47 |
| Msa0139060 | Msa1190400 | 0.822215 | 2.668905e-53 | -8.615850e-47 |
| Msa0140780 | Msa1190400 | 0.808971 | 2.382309e-50 | -8.615850e-47 |
| Msa0157290 | Msa1190400 | 0.877611 | 5.469367e-69 | -8.615850e-47 |
| Msa0163980 | Msa1190400 | 0.805651 | 1.204126e-49 | -8.615850e-47 |
| Msa0165210 | Msa1190400 | 0.823072 | 1.686751e-53 | -8.615850e-47 |
| Msa0165220 | Msa1190400 | 0.817986 | 2.481249e-52 | -8.615850e-47 |
| Msa0166560 | Msa1190400 | 0.803729 | 3.034251e-49 | -8.615850e-47 |
| Msa0173990 | Msa1190400 | 0.806994 | 6.278245e-50 | -8.615850e-47 |
| Msa0175780 | Msa1190400 | 0.801698 | 7.962357e-49 | -8.615850e-47 |
| Msa0178960 | Msa1190400 | 0.812542 | 4.024030e-51 | -8.615850e-47 |
| Msa0197660 | Msa1190400 | 0.816062 | 6.711791e-52 | -8.615850e-47 |
| Msa0197930 | Msa1190400 | 0.811746 | 6.000061e-51 | -8.615850e-47 |
| Msa0200260 | Msa1190400 | 0.832479 | 9.234630e-56 | -8.615850e-47 |
| Msa0212310 | Msa1190400 | 0.811082 | 8.362242e-51 | -8.615850e-47 |
| Msa0212990 | Msa1190400 | 0.803159 | 3.981084e-49 | -8.615850e-47 |
| Msa0215320 | Msa1190400 | -0.840522 | 8.267287e-58 | -8.615850e-47 |
| Msa0216910 | Msa1190400 | 0.815991 | 6.959862e-52 | -8.615850e-47 |
| Msa0218780 | Msa1190400 | 0.801254 | 9.819328e-49 | -8.615850e-47 |
| Msa0220580 | Msa1190400 | 0.801648 | 8.154985e-49 | -8.615850e-47 |
| Msa0220740 | Msa1190400 | 0.814643 | 1.387481e-51 | -8.615850e-47 |
| Msa0223410 | Msa1190400 | -0.803451 | 3.463873e-49 | -8.615850e-47 |
| Msa0225760 | Msa1190400 | 0.802589 | 5.223223e-49 | -8.615850e-47 |
| Msa0226890 | Msa1190400 | 0.823439 | 1.384111e-53 | -8.615850e-47 |
| Msa0230740 | Msa1190400 | 0.802984 | 4.328063e-49 | -8.615850e-47 |
| Msa0376350 | Msa1190400 | 0.809312 | 2.013549e-50 | -8.615850e-47 |
| Msa0392490 | Msa1190400 | 0.801848 | 7.418020e-49 | -8.615850e-47 |
| Msa0393080 | Msa1190400 | 0.807690 | 4.467839e-50 | -8.615850e-47 |
| Msa0395790 | Msa1190400 | 0.821073 | 4.900658e-53 | -8.615850e-47 |
| Msa0406120 | Msa1190400 | 0.805174 | 1.515980e-49 | -8.615850e-47 |
| Msa0406880 | Msa1190400 | 0.808809 | 2.580167e-50 | -8.615850e-47 |
| Msa0410650 | Msa1190400 | 0.810791 | 9.669142e-51 | -8.615850e-47 |
| Msa0417500 | Msa1190400 | 0.801044 | 1.083881e-48 | -8.615850e-47 |
| Msa0417880 | Msa1190400 | 0.801540 | 8.578877e-49 | -8.615850e-47 |
| Msa0419820 | Msa1190400 | 0.821332 | 4.270939e-53 | -8.615850e-47 |
| Msa0422850 | Msa1190400 | 0.812610 | 3.887294e-51 | -8.615850e-47 |
| Msa0422930 | Msa1190400 | 0.811410 | 7.099119e-51 | -8.615850e-47 |
| Msa0424790 | Msa1190400 | 0.815799 | 7.683894e-52 | -8.615850e-47 |
| Msa0428080 | Msa1190400 | 0.805492 | 1.300683e-49 | -8.615850e-47 |
| Msa0428590 | Msa1190400 | 0.824735 | 6.869834e-54 | -8.615850e-47 |
| Msa0435390 | Msa1190400 | 0.819662 | 1.032725e-52 | -8.615850e-47 |
| Msa0435400 | Msa1190400 | 0.818877 | 1.558315e-52 | -8.615850e-47 |
| Msa0436050 | Msa1190400 | 0.807931 | 3.970901e-50 | -8.615850e-47 |
| Msa0436490 | Msa1190400 | -0.812346 | 4.440435e-51 | -8.615850e-47 |
| Msa0440750 | Msa1190400 | 0.821941 | 3.089453e-53 | -8.615850e-47 |
| Msa0443260 | Msa1190400 | 0.817660 | 2.938298e-52 | -8.615850e-47 |
| Msa0461720 | Msa1190400 | 0.815699 | 8.088599e-52 | -8.615850e-47 |
| Msa0464680 | Msa1190400 | 0.812241 | 4.680397e-51 | -8.615850e-47 |
| Msa0465940 | Msa1190400 | 0.823173 | 1.597286e-53 | -8.615850e-47 |
| Msa0466390 | Msa1190400 | 0.829629 | 4.626566e-55 | -8.615850e-47 |
| Msa0471800 | Msa1190400 | 0.803018 | 4.258951e-49 | -8.615850e-47 |
| Msa0480980 | Msa1190400 | 0.825960 | 3.525128e-54 | -8.615850e-47 |
| Msa0980090 | Msa1190400 | 0.834382 | 3.096279e-56 | -8.615850e-47 |
| Msa0983090 | Msa1190400 | 0.800075 | 1.708605e-48 | -8.615850e-47 |
| Msa0986030 | Msa1190400 | 0.809411 | 1.917667e-50 | -8.615850e-47 |
| Msa0993290 | Msa1190400 | 0.839818 | 1.261984e-57 | -8.615850e-47 |
| Msa0993600 | Msa1190400 | 0.843953 | 1.020418e-58 | -8.615850e-47 |
| Msa0998690 | Msa1190400 | 0.804702 | 1.903080e-49 | -8.615850e-47 |
| Msa1014540 | Msa1190400 | 0.841123 | 5.752309e-58 | -8.615850e-47 |
| Msa1019430 | Msa1190400 | 0.803575 | 3.265840e-49 | -8.615850e-47 |
| Msa1024240 | Msa1190400 | 0.804905 | 1.725904e-49 | -8.615850e-47 |
| Msa1026500 | Msa1190400 | 0.806358 | 8.552582e-50 | -8.615850e-47 |
| Msa1030970 | Msa1190400 | 0.855903 | 4.614880e-62 | -8.615850e-47 |
| Msa1046300 | Msa1190400 | 0.801615 | 8.280992e-49 | -8.615850e-47 |
| Msa1070010 | Msa1190400 | 0.820705 | 5.954419e-53 | -8.615850e-47 |
| Msa1075220 | Msa1190400 | -0.812322 | 4.493344e-51 | -8.615850e-47 |
| Msa1075540 | Msa1190400 | 0.830619 | 2.651749e-55 | -8.615850e-47 |
| Msa1082500 | Msa1190400 | 0.829037 | 6.438766e-55 | -8.615850e-47 |
| Msa1085200 | Msa1190400 | 0.811959 | 5.394181e-51 | -8.615850e-47 |
| Msa1085300 | Msa1190400 | 0.804429 | 2.169750e-49 | -8.615850e-47 |
| Msa1100050 | Msa1190400 | 0.819830 | 9.453037e-53 | -8.615850e-47 |
| Msa1104000 | Msa1190400 | 0.803932 | 2.752520e-49 | -8.615850e-47 |
| Msa0239800 | Msa1190400 | 0.807506 | 4.888645e-50 | -8.615850e-47 |
| Msa0241640 | Msa1190400 | 0.810297 | 1.236377e-50 | -8.615850e-47 |
| Msa0243100 | Msa1190400 | 0.835048 | 2.105384e-56 | -8.615850e-47 |
| Msa0244860 | Msa1190400 | 0.805935 | 1.049779e-49 | -8.615850e-47 |
| Msa0260670 | Msa1190400 | 0.802280 | 6.047584e-49 | -8.615850e-47 |
| Msa0261340 | Msa1190400 | 0.819433 | 1.164342e-52 | -8.615850e-47 |
| Msa0264150 | Msa1190400 | 0.813645 | 2.304731e-51 | -8.615850e-47 |
| Msa0271850 | Msa1190400 | 0.804014 | 2.646869e-49 | -8.615850e-47 |
| Msa0279790 | Msa1190400 | 0.813819 | 2.110101e-51 | -8.615850e-47 |
| Msa0283450 | Msa1190400 | 0.813298 | 2.747170e-51 | -8.615850e-47 |
| Msa0287650 | Msa1190400 | 0.816519 | 5.304802e-52 | -8.615850e-47 |
| Msa0306300 | Msa1190400 | 0.808672 | 2.760875e-50 | -8.615850e-47 |
| Msa0317280 | Msa1190400 | 0.804407 | 2.192489e-49 | -8.615850e-47 |
| Msa0317510 | Msa1190400 | 0.814425 | 1.551217e-51 | -8.615850e-47 |
| Msa0323610 | Msa1190400 | 0.824814 | 6.582301e-54 | -8.615850e-47 |
| Msa0332000 | Msa1190400 | 0.804386 | 2.215153e-49 | -8.615850e-47 |
| Msa0336040 | Msa1190400 | -0.805959 | 1.037647e-49 | -8.615850e-47 |
| Msa0338490 | Msa1190400 | 0.810315 | 1.225486e-50 | -8.615850e-47 |
| Msa0340450 | Msa1190400 | 0.827227 | 1.757686e-54 | -8.615850e-47 |
| Msa0345410 | Msa1190400 | 0.803093 | 4.109753e-49 | -8.615850e-47 |
| Msa0345970 | Msa1190400 | 0.802447 | 5.584908e-49 | -8.615850e-47 |
| Msa0350990 | Msa1190400 | 0.806979 | 6.321744e-50 | -8.615850e-47 |
| Msa0351030 | Msa1190400 | 0.807374 | 5.215990e-50 | -8.615850e-47 |
| Msa0351100 | Msa1190400 | 0.809261 | 2.065388e-50 | -8.615850e-47 |
| Msa0359030 | Msa1190400 | 0.800710 | 1.268161e-48 | -8.615850e-47 |
| Msa1113170 | Msa1190400 | 0.802297 | 5.999145e-49 | -8.615850e-47 |
| Msa1114250 | Msa1190400 | 0.811233 | 7.756171e-51 | -8.615850e-47 |
| Msa1121490 | Msa1190400 | 0.812508 | 4.093788e-51 | -8.615850e-47 |
| Msa1131220 | Msa1190400 | 0.808047 | 3.752690e-50 | -8.615850e-47 |
| Msa1151910 | Msa1190400 | 0.820231 | 7.649262e-53 | -8.615850e-47 |
| Msa1156020 | Msa1190400 | 0.803994 | 2.671897e-49 | -8.615850e-47 |
| Msa1162550 | Msa1190400 | -0.810384 | 1.183983e-50 | -8.615850e-47 |
| Msa1169000 | Msa1190400 | 0.824203 | 9.167395e-54 | -8.615850e-47 |
| Msa1189430 | Msa1190400 | 0.811041 | 8.537263e-51 | -8.615850e-47 |
| Msa1190400 | Msa1193290 | 0.809488 | 1.846056e-50 | -8.615850e-47 |
| Msa1190400 | Msa1199220 | 0.811641 | 6.325227e-51 | -8.615850e-47 |
| Msa1190400 | Msa1205130 | 0.816622 | 5.030460e-52 | -8.615850e-47 |
| Msa1190400 | Msa1222970 | 0.825204 | 5.323419e-54 | -8.615850e-47 |
| Msa1190400 | Msa1226660 | 0.813991 | 1.933663e-51 | -8.615850e-47 |
| Msa1190400 | Msa1233890 | 0.802240 | 6.162297e-49 | -8.615850e-47 |
| Msa1190400 | Msa1238930 | 0.830915 | 2.244627e-55 | -8.615850e-47 |
| Msa1190400 | Msa1239920 | 0.804013 | 2.648687e-49 | -8.615850e-47 |
| Msa1190400 | Msa1242220 | 0.807669 | 4.515634e-50 | -8.615850e-47 |
| Msa1190400 | Msa1242670 | 0.809999 | 1.433223e-50 | -8.615850e-47 |
| Msa1190400 | Msa1244250 | 0.909832 | 3.679711e-82 | -8.615850e-47 |
| Msa1190400 | Msa1249490 | 0.814893 | 1.221546e-51 | -8.615850e-47 |
| Msa1190400 | Msa1264020 | 0.804337 | 2.267933e-49 | -8.615850e-47 |
| Msa1190400 | Msa1271290 | 0.810697 | 1.013062e-50 | -8.615850e-47 |
| Msa1190400 | Msa1277660 | 0.800533 | 1.378346e-48 | -8.615850e-47 |
| Msa1190400 | Msa1278840 | 0.802950 | 4.398488e-49 | -8.615850e-47 |
| Msa1190400 | Msa1283860 | 0.828516 | 8.606926e-55 | -8.615850e-47 |
| Msa1190400 | Msa1284680 | 0.844195 | 8.787466e-59 | -8.615850e-47 |
| Msa1190400 | Msa1302830 | 0.805929 | 1.052881e-49 | -8.615850e-47 |
| Msa1190400 | Msa1308380 | 0.819652 | 1.037773e-52 | -8.615850e-47 |
| Msa1190400 | Msa1308580 | 0.805979 | 1.027478e-49 | -8.615850e-47 |
| Msa1190400 | Msa1308620 | 0.819688 | 1.018599e-52 | -8.615850e-47 |
| Msa1190400 | Msa1314170 | 0.816492 | 5.378730e-52 | -8.615850e-47 |
| Msa1190400 | Msa1322890 | 0.818294 | 2.113021e-52 | -8.615850e-47 |
| Msa1190400 | Msa1324500 | 0.817502 | 3.190657e-52 | -8.615850e-47 |
| Msa1190400 | Msa1324550 | 0.810839 | 9.441144e-51 | -8.615850e-47 |
| Msa1190400 | Msa1324780 | 0.824792 | 6.661424e-54 | -8.615850e-47 |
| Msa1190400 | Msa1327680 | 0.817241 | 3.652869e-52 | -8.615850e-47 |
| Msa1190400 | Msa1336670 | 0.806535 | 7.846553e-50 | -8.615850e-47 |
| Msa1190400 | Msa1346370 | 0.840107 | 1.060925e-57 | -8.615850e-47 |
| Msa1190400 | Msa1348950 | 0.805500 | 1.295754e-49 | -8.615850e-47 |
| Msa1190400 | Msa1351620 | 0.800123 | 1.670426e-48 | -8.615850e-47 |
| Msa1190400 | Msa1359040 | 0.816791 | 4.610105e-52 | -8.615850e-47 |
| Msa1190400 | Msa1360060 | 0.819820 | 9.498725e-53 | -8.615850e-47 |
| Msa1190400 | Msa1367080 | 0.822417 | 2.396155e-53 | -8.615850e-47 |
| Msa1190400 | Msa1372760 | 0.826823 | 2.196149e-54 | -8.615850e-47 |
| Msa1190400 | Msa1374550 | 0.832630 | 8.472519e-56 | -8.615850e-47 |
| Msa1190400 | Msa1378760 | 0.805033 | 1.623081e-49 | -8.615850e-47 |
| Msa1190400 | Msa1392240 | 0.803659 | 3.137508e-49 | -8.615850e-47 |
| Msa1190400 | Msa1409870 | 0.815282 | 1.001481e-51 | -8.615850e-47 |
| Msa1190400 | Msa1411070 | 0.809488 | 1.846056e-50 | -8.615850e-47 |
| Msa1190400 | Msa1424750 | 0.817164 | 3.801431e-52 | -8.615850e-47 |
| Msa1190400 | Msa1430240 | 0.804676 | 1.926573e-49 | -8.615850e-47 |
| Msa1190400 | Msa1431430 | 0.802635 | 5.110093e-49 | -8.615850e-47 |
| Msa1190400 | Msa1438250 | 0.833561 | 4.967698e-56 | -8.615850e-47 |
| Msa1190400 | Msa1445610 | -0.803454 | 3.459549e-49 | -8.615850e-47 |
| Msa1190400 | Msa1460020 | 0.801445 | 8.974514e-49 | -8.615850e-47 |
| Msa1190400 | Msa1461300 | 0.824234 | 9.013472e-54 | -8.615850e-47 |
| Msa1190400 | Msa1464940 | 0.800962 | 1.126660e-48 | -8.615850e-47 |
| Msa1190400 | Msa1466540 | 0.804200 | 2.421764e-49 | -8.615850e-47 |
| Msa0487570 | Msa1190400 | 0.802809 | 4.704000e-49 | -8.615850e-47 |
| Msa0487630 | Msa1190400 | 0.810520 | 1.106586e-50 | -8.615850e-47 |
| Msa0503580 | Msa1190400 | 0.802308 | 5.967426e-49 | -8.615850e-47 |
| Msa0507680 | Msa1190400 | 0.808249 | 3.397586e-50 | -8.615850e-47 |
| Msa0512900 | Msa1190400 | 0.807938 | 3.958460e-50 | -8.615850e-47 |
| Msa0516170 | Msa1190400 | 0.819207 | 1.311262e-52 | -8.615850e-47 |
| Msa0517110 | Msa1190400 | 0.801340 | 9.429226e-49 | -8.615850e-47 |
| Msa0523940 | Msa1190400 | 0.818929 | 1.516248e-52 | -8.615850e-47 |
| Msa0527550 | Msa1190400 | 0.807456 | 5.011475e-50 | -8.615850e-47 |
| Msa0533070 | Msa1190400 | 0.803762 | 2.986321e-49 | -8.615850e-47 |
| Msa0535040 | Msa1190400 | 0.820669 | 6.069549e-53 | -8.615850e-47 |
| Msa0569200 | Msa1190400 | 0.801396 | 9.182280e-49 | -8.615850e-47 |
| Msa0574890 | Msa1190400 | 0.804199 | 2.422634e-49 | -8.615850e-47 |
| Msa0581760 | Msa1190400 | 0.825326 | 4.983691e-54 | -8.615850e-47 |
| Msa0597330 | Msa1190400 | 0.802896 | 4.513857e-49 | -8.615850e-47 |
| Msa0600700 | Msa1190400 | 0.800607 | 1.331215e-48 | -8.615850e-47 |
| Msa0601850 | Msa1190400 | 0.806486 | 8.035660e-50 | -8.615850e-47 |
| Msa0602240 | Msa1190400 | 0.818582 | 1.818625e-52 | -8.615850e-47 |
| Msa0602250 | Msa1190400 | 0.819156 | 1.346613e-52 | -8.615850e-47 |
| Msa0843220 | Msa1190400 | 0.807668 | 4.517039e-50 | -8.615850e-47 |
| Msa0844560 | Msa1190400 | 0.819031 | 1.437721e-52 | -8.615850e-47 |
| Msa0853540 | Msa1190400 | 0.802893 | 4.520476e-49 | -8.615850e-47 |
| Msa0871270 | Msa1190400 | 0.834301 | 3.243993e-56 | -8.615850e-47 |
| Msa0880140 | Msa1190400 | 0.873503 | 1.397834e-67 | -8.615850e-47 |
| Msa0885280 | Msa1190400 | 0.801059 | 1.076462e-48 | -8.615850e-47 |
| Msa0888530 | Msa1190400 | 0.818813 | 1.611400e-52 | -8.615850e-47 |
| Msa0896750 | Msa1190400 | 0.805851 | 1.093077e-49 | -8.615850e-47 |
| Msa0897330 | Msa1190400 | 0.805230 | 1.475643e-49 | -8.615850e-47 |
| Msa0907070 | Msa1190400 | 0.833897 | 4.095357e-56 | -8.615850e-47 |
| Msa0909120 | Msa1190400 | 0.809560 | 1.781480e-50 | -8.615850e-47 |
| Msa0909140 | Msa1190400 | 0.813473 | 2.514485e-51 | -8.615850e-47 |
| Msa0925180 | Msa1190400 | 0.814305 | 1.648768e-51 | -8.615850e-47 |
| Msa0938220 | Msa1190400 | 0.842088 | 3.201780e-58 | -8.615850e-47 |
| Msa0947660 | Msa1190400 | 0.804986 | 1.659847e-49 | -8.615850e-47 |
| Msa0954130 | Msa1190400 | 0.801592 | 8.374184e-49 | -8.615850e-47 |
| Msa0969520 | Msa1190400 | 0.812463 | 4.185487e-51 | -8.615850e-47 |
| Msa0974070 | Msa1190400 | 0.801623 | 8.249676e-49 | -8.615850e-47 |
| Msa0975340 | Msa1190400 | 0.827006 | 1.985082e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190400 | MtrunA17_Chr8g0359261 | 94.043 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 4.08e-158 | 437 |
| Msa1190400 | MtrunA17_Chr2g0314571 | 76.271 | 236 | 55 | 1 | 1 | 235 | 1 | 236 | 1.47e-129 | 365 |
| Msa1190400 | MtrunA17_Chr1g0159431 | 48.095 | 210 | 109 | 0 | 18 | 227 | 9 | 218 | 5.28e-65 | 202 |
| Msa1190400 | MtrunA17_Chr3g0125861 | 47.887 | 213 | 110 | 1 | 18 | 229 | 9 | 221 | 1.45e-63 | 198 |
| Msa1190400 | MtrunA17_Chr3g0119951 | 43.836 | 219 | 121 | 2 | 8 | 224 | 2 | 220 | 4.64e-54 | 174 |
| Msa1190400 | MtrunA17_Chr1g0158931 | 39.906 | 213 | 125 | 2 | 9 | 218 | 1 | 213 | 5.82e-49 | 161 |
| Msa1190400 | MtrunA17_Chr6g0450941 | 42.788 | 208 | 115 | 3 | 14 | 218 | 81 | 287 | 7.48e-49 | 162 |
| Msa1190400 | MtrunA17_Chr3g0119991 | 44.221 | 199 | 109 | 2 | 28 | 224 | 1 | 199 | 2.41e-48 | 159 |
| Msa1190400 | MtrunA17_Chr3g0126411 | 37.850 | 214 | 130 | 2 | 11 | 221 | 3 | 216 | 2.67e-47 | 157 |
| Msa1190400 | MtrunA17_Chr8g0388621 | 39.070 | 215 | 129 | 2 | 10 | 222 | 6 | 220 | 1.04e-46 | 155 |
| Msa1190400 | MtrunA17_Chr3g0126421 | 37.799 | 209 | 127 | 2 | 16 | 221 | 8 | 216 | 7.64e-45 | 150 |
| Msa1190400 | MtrunA17_Chr6g0450951 | 41.667 | 192 | 108 | 3 | 34 | 222 | 5 | 195 | 5.86e-40 | 137 |
| Msa1190400 | MtrunA17_Chr5g0428281 | 38.140 | 215 | 129 | 3 | 18 | 230 | 14 | 226 | 6.28e-40 | 138 |
| Msa1190400 | MtrunA17_Chr8g0386011 | 38.278 | 209 | 121 | 4 | 18 | 222 | 13 | 217 | 4.18e-39 | 135 |
| Msa1190400 | MtrunA17_Chr3g0131961 | 36.493 | 211 | 133 | 1 | 18 | 228 | 14 | 223 | 7.09e-38 | 133 |
| Msa1190400 | MtrunA17_Chr6g0450931 | 36.538 | 208 | 124 | 3 | 34 | 233 | 5 | 212 | 3.67e-37 | 129 |
| Msa1190400 | MtrunA17_Chr3g0131951 | 37.915 | 211 | 123 | 4 | 16 | 222 | 73 | 279 | 1.65e-36 | 132 |
| Msa1190400 | MtrunA17_Chr2g0295681 | 40.566 | 212 | 115 | 4 | 18 | 224 | 9 | 214 | 1.98e-36 | 128 |
| Msa1190400 | MtrunA17_Chr7g0215601 | 37.383 | 214 | 127 | 3 | 18 | 228 | 14 | 223 | 6.28e-36 | 127 |
| Msa1190400 | MtrunA17_Chr4g0059191 | 35.644 | 202 | 128 | 2 | 30 | 229 | 1 | 202 | 8.20e-36 | 125 |
| Msa1190400 | MtrunA17_Chr7g0214181 | 38.140 | 215 | 130 | 2 | 16 | 229 | 11 | 223 | 4.95e-35 | 125 |
| Msa1190400 | MtrunA17_Chr5g0444031 | 35.961 | 203 | 127 | 2 | 23 | 224 | 38 | 238 | 1.64e-34 | 124 |
| Msa1190400 | MtrunA17_Chr7g0214191 | 39.216 | 204 | 121 | 2 | 18 | 220 | 13 | 214 | 1.95e-34 | 124 |
| Msa1190400 | MtrunA17_Chr8g0386001 | 33.014 | 209 | 132 | 4 | 18 | 222 | 13 | 217 | 1.83e-31 | 116 |
| Msa1190400 | MtrunA17_Chr2g0278491 | 33.714 | 175 | 110 | 3 | 61 | 233 | 1 | 171 | 5.89e-26 | 100 |
| Msa1190400 | MtrunA17_Chr6g0450901 | 35.644 | 101 | 64 | 1 | 129 | 228 | 4 | 104 | 1.08e-14 | 68.2 |
| Msa1190400 | MtrunA17_Chr6g0450911 | 36.634 | 101 | 53 | 1 | 20 | 109 | 25 | 125 | 3.28e-14 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190400 | AT3G14770.1 | 66.094 | 233 | 74 | 3 | 4 | 234 | 6 | 235 | 2.04e-103 | 299 |
| Msa1190400 | AT1G21460.1 | 46.445 | 211 | 113 | 0 | 18 | 228 | 9 | 219 | 8.37e-63 | 196 |
| Msa1190400 | AT1G21460.2 | 46.703 | 182 | 97 | 0 | 18 | 199 | 9 | 190 | 9.76e-52 | 167 |
| Msa1190400 | AT4G10850.1 | 40.359 | 223 | 125 | 4 | 14 | 229 | 10 | 231 | 4.59e-49 | 162 |
| Msa1190400 | AT5G62850.1 | 36.818 | 220 | 137 | 2 | 11 | 228 | 5 | 224 | 2.11e-48 | 159 |
| Msa1190400 | AT5G53190.1 | 39.713 | 209 | 123 | 2 | 18 | 223 | 10 | 218 | 8.45e-47 | 156 |
| Msa1190400 | AT1G66770.1 | 40.376 | 213 | 122 | 3 | 14 | 222 | 10 | 221 | 1.72e-45 | 152 |
| Msa1190400 | AT5G13170.1 | 39.151 | 212 | 119 | 4 | 18 | 224 | 15 | 221 | 1.33e-43 | 149 |
| Msa1190400 | AT5G23660.1 | 40.000 | 205 | 116 | 3 | 18 | 219 | 15 | 215 | 6.68e-42 | 144 |
| Msa1190400 | AT4G15920.1 | 39.810 | 211 | 121 | 3 | 18 | 225 | 9 | 216 | 1.59e-41 | 142 |
| Msa1190400 | AT3G48740.1 | 38.288 | 222 | 127 | 4 | 1 | 219 | 1 | 215 | 2.47e-41 | 142 |
| Msa1190400 | AT5G50800.1 | 38.288 | 222 | 128 | 5 | 18 | 233 | 13 | 231 | 3.80e-41 | 142 |
| Msa1190400 | AT5G40260.1 | 35.945 | 217 | 134 | 4 | 18 | 229 | 12 | 228 | 6.73e-41 | 140 |
| Msa1190400 | AT3G28007.1 | 39.720 | 214 | 125 | 4 | 11 | 221 | 5 | 217 | 2.48e-40 | 139 |
| Msa1190400 | AT4G25010.1 | 39.462 | 223 | 125 | 6 | 18 | 233 | 13 | 232 | 3.68e-40 | 139 |
| Msa1190400 | AT5G62850.2 | 35.789 | 190 | 121 | 1 | 11 | 199 | 5 | 194 | 6.17e-38 | 132 |
| Msa1190400 | AT2G39060.1 | 36.620 | 213 | 131 | 3 | 18 | 228 | 13 | 223 | 1.85e-37 | 132 |
| Msa1190400 | AT3G16690.1 | 35.266 | 207 | 130 | 2 | 18 | 222 | 9 | 213 | 6.35e-36 | 127 |
| Msa1190400 | AT3G16690.3 | 35.484 | 217 | 128 | 5 | 18 | 231 | 44 | 251 | 9.99e-36 | 127 |
| Msa1190400 | AT5G50790.1 | 37.850 | 214 | 128 | 3 | 18 | 229 | 13 | 223 | 2.45e-35 | 127 |
| Msa1190400 | AT5G40260.2 | 35.542 | 166 | 104 | 2 | 18 | 180 | 12 | 177 | 1.66e-30 | 112 |
| Msa1190400 | AT3G16690.2 | 31.206 | 141 | 91 | 4 | 18 | 155 | 9 | 146 | 1.60e-14 | 70.1 |
Find 66 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATCTCCTTCTTTCTTTA+TGG | 0.017500 | 8_1:-33281292 | Msa1190400:CDS |
| TTCACTAAATCATAAGTTAA+AGG | 0.158012 | 8_1:-33282258 | Msa1190400:five_prime_UTR |
| TGAATTGTAGACCCACATTT+AGG | 0.291772 | 8_1:-33281945 | Msa1190400:intron |
| AAATGGGATAGGTACTGTTT+TGG | 0.311202 | 8_1:-33281114 | Msa1190400:CDS |
| AGTTTCAGACAACATATTTA+CGG | 0.324613 | 8_1:+33279160 | None:intergenic |
| GTAGGTAATATCTTTGCATT+TGG | 0.325780 | 8_1:-33282070 | Msa1190400:intron |
| GTTACAGCTGTTAATTCAAT+TGG | 0.332559 | 8_1:-33281802 | Msa1190400:CDS |
| TATATCACCTGATAATTTGT+TGG | 0.346753 | 8_1:-33281824 | Msa1190400:CDS |
| TTCAATAGAGAATAAATATA+TGG | 0.355131 | 8_1:+33281880 | None:intergenic |
| TTTAGGAGAATTATGAGAAA+TGG | 0.365995 | 8_1:-33281928 | Msa1190400:CDS |
| TGAACCGTACTTGAATGATT+AGG | 0.367136 | 8_1:+33278996 | None:intergenic |
| ATTCAAGTACGGTTCAGTTC+AGG | 0.380013 | 8_1:-33278989 | Msa1190400:three_prime_UTR |
| TCTGATTAAACTATCTTAGA+AGG | 0.387203 | 8_1:+33279442 | None:intergenic |
| ACAATTATCCTCATTTCGTT+TGG | 0.389399 | 8_1:+33282324 | None:intergenic |
| TGAATTGTTTGATCTGTTTG+TGG | 0.392314 | 8_1:-33281861 | Msa1190400:CDS |
| TAGGTAATATCTTTGCATTT+GGG | 0.393033 | 8_1:-33282069 | Msa1190400:CDS |
| GCTTACTCCATTTGTGAAGT+TGG | 0.397617 | 8_1:-33282211 | Msa1190400:CDS |
| GAACCGTACTTGAATGATTA+GGG | 0.404553 | 8_1:+33278997 | None:intergenic |
| TTGATTTGTTAGGTACCAAA+TGG | 0.416862 | 8_1:-33281131 | Msa1190400:intron |
| AAAGATGCAGCTGGAATTGC+TGG | 0.429368 | 8_1:-33282187 | Msa1190400:intron |
| ATCTTTACCAACTTCACAAA+TGG | 0.441698 | 8_1:+33282204 | None:intergenic |
| TTTAAATATTCCATCGAAGT+AGG | 0.447746 | 8_1:-33279469 | Msa1190400:three_prime_UTR |
| GCTGTAACCAACAAATTATC+AGG | 0.453364 | 8_1:+33281817 | None:intergenic |
| TCTATTCGCCGAATGTTAGT+TGG | 0.469687 | 8_1:-33281540 | Msa1190400:CDS |
| GAGAATGTTTGGATTATTGA+TGG | 0.473125 | 8_1:-33281619 | Msa1190400:CDS |
| TTCAAGTACGGTTCAGTTCA+GGG | 0.474428 | 8_1:-33278988 | Msa1190400:three_prime_UTR |
| AAGCTATATATTTAATAATA+CGG | 0.475164 | 8_1:+33278947 | None:intergenic |
| TGTTTGATCTGTTTGTGGTA+TGG | 0.479530 | 8_1:-33281856 | Msa1190400:CDS |
| ATATCTCATAGGCTCATAAG+AGG | 0.479995 | 8_1:-33279057 | Msa1190400:three_prime_UTR |
| TATATTTAATAATACGGTCC+AGG | 0.484208 | 8_1:+33278953 | None:intergenic |
| TCTCATAATTCTCCTAAATG+TGG | 0.499347 | 8_1:+33281933 | None:intergenic |
| AAAACAGTACCTATCCCATT+TGG | 0.500505 | 8_1:+33281116 | None:intergenic |
| TACTATTGAGTATATCTCAT+AGG | 0.503957 | 8_1:-33279068 | Msa1190400:three_prime_UTR |
| GTTGAAAGCGAAAGATAAAA+CGG | 0.511258 | 8_1:+33281325 | None:intergenic |
| GGATCAACAGAAATGTTCTC+AGG | 0.511748 | 8_1:-33281907 | Msa1190400:CDS |
| TGATTTGTTAGGTACCAAAT+GGG | 0.514371 | 8_1:-33281130 | Msa1190400:intron |
| AAATTATCAGGTGATATAAG+AGG | 0.515068 | 8_1:+33281829 | None:intergenic |
| CTCATAATTCTCCTAAATGT+GGG | 0.519009 | 8_1:+33281934 | None:intergenic |
| GAAGGAGATGGTCATTAAGA+AGG | 0.521637 | 8_1:+33281303 | None:intergenic |
| TCAAGCATCCAACTAACATT+CGG | 0.535361 | 8_1:+33281532 | None:intergenic |
| TCTATGCTGACAAAGGCAAA+AGG | 0.544645 | 8_1:-33281005 | Msa1190400:intron |
| TATTTGTGATCATACTAGTC+GGG | 0.546736 | 8_1:-33281584 | Msa1190400:CDS |
| GAGTAATCCATAAAGAAAGA+AGG | 0.551073 | 8_1:+33281285 | None:intergenic |
| TCAGGGGTATTGTTGAAACC+TGG | 0.554469 | 8_1:-33278971 | Msa1190400:three_prime_UTR |
| TTATCCATACGACACTATCA+AGG | 0.565472 | 8_1:+33281028 | None:intergenic |
| TGTTAGGTACCAAATGGGAT+AGG | 0.566157 | 8_1:-33281125 | Msa1190400:intron |
| CATTCGGCGAATAGAACTAT+CGG | 0.572340 | 8_1:+33281548 | None:intergenic |
| TCACCCTAATCATTCAAGTA+CGG | 0.579454 | 8_1:-33279000 | Msa1190400:three_prime_UTR |
| GTTGTATCAGATAGACAATG+AGG | 0.580325 | 8_1:+33279310 | None:intergenic |
| GAACCCTTGATAGTGTCGTA+TGG | 0.586423 | 8_1:-33281032 | Msa1190400:CDS |
| AAACTTACAATTATAAACAA+TGG | 0.588241 | 8_1:+33281477 | None:intergenic |
| ATATTTGTGATCATACTAGT+CGG | 0.588397 | 8_1:-33281585 | Msa1190400:CDS |
| AGAAGGAAATCCTACTTCGA+TGG | 0.591282 | 8_1:+33279459 | None:intergenic |
| TACAAGAGTTCATCTAGCGA+TGG | 0.594097 | 8_1:-33281062 | Msa1190400:CDS |
| TACAATTATAAACAATGGAG+AGG | 0.595947 | 8_1:+33281482 | None:intergenic |
| TCAAGTACGGTTCAGTTCAG+GGG | 0.598356 | 8_1:-33278987 | Msa1190400:three_prime_UTR |
| GAAGTTGGTAAAGATGCAGC+TGG | 0.604639 | 8_1:-33282196 | Msa1190400:CDS |
| TATCTCATAGGCTCATAAGA+GGG | 0.604766 | 8_1:-33279056 | Msa1190400:three_prime_UTR |
| TGGATAATCTATGCTGACAA+AGG | 0.615539 | 8_1:-33281012 | Msa1190400:exon |
| TTAGTTGGATGCTTGAGTTG+TGG | 0.618142 | 8_1:-33281525 | Msa1190400:CDS |
| TCCATAAAGAAAGAAGGAGA+TGG | 0.628814 | 8_1:+33281291 | None:intergenic |
| AATGATCTCAAAGTCAAACA+TGG | 0.632162 | 8_1:-33279195 | Msa1190400:three_prime_UTR |
| ATCTCATAGGCTCATAAGAG+GGG | 0.632505 | 8_1:-33279055 | Msa1190400:three_prime_UTR |
| TATCCATACGACACTATCAA+GGG | 0.638241 | 8_1:+33281029 | None:intergenic |
| AATATGTTGTCTGAAACTAG+AGG | 0.691450 | 8_1:-33279155 | Msa1190400:three_prime_UTR |
| AAGAAAGAGATGTTACAGTG+AGG | 0.724248 | 8_1:+33279229 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAACTGAAAATTAA+AGG | + | chr8_1:33279076-33279095 | None:intergenic | 10.0% |
| !! | AATAAATAAAATACTTACAT+TGG | + | chr8_1:33279192-33279211 | None:intergenic | 10.0% |
| !!! | ATAGTTTTTTTTTTTTTTGA+GGG | - | chr8_1:33280753-33280772 | Msa1190400:intron | 10.0% |
| !! | AAGCTATATATTTAATAATA+CGG | + | chr8_1:33282279-33282298 | None:intergenic | 10.0% |
| !! | TTCAATAGAGAATAAATATA+TGG | + | chr8_1:33279346-33279365 | None:intergenic | 15.0% |
| !!! | TTGTTATTTTTCTAATACTA+TGG | - | chr8_1:33279506-33279525 | Msa1190400:three_prime_UTR | 15.0% |
| !! | AAACTTACAATTATAAACAA+TGG | + | chr8_1:33279749-33279768 | None:intergenic | 15.0% |
| !! | CTCAAAAAAAAAAAAAACTA+TGG | + | chr8_1:33280754-33280773 | None:intergenic | 15.0% |
| !!! | CATAGTTTTTTTTTTTTTTG+AGG | - | chr8_1:33280752-33280771 | Msa1190400:intron | 15.0% |
| !!! | GTTTTTAAATTATCACAATT+AGG | + | chr8_1:33281187-33281206 | None:intergenic | 15.0% |
| !! | AATTGACCAAAAAAAATATA+TGG | - | chr8_1:33281579-33281598 | Msa1190400:CDS | 15.0% |
| !!! | GAATATCCATATATTTTTTT+TGG | + | chr8_1:33281588-33281607 | None:intergenic | 15.0% |
| !!! | ATTGTTTTGATTCAATATTT+TGG | - | chr8_1:33282098-33282117 | Msa1190400:intron | 15.0% |
| !!! | TTTTATTACTTGAATGATTA+GGG | + | chr8_1:33282315-33282334 | None:intergenic | 15.0% |
| !! | TTCACTAAATCATAAGTTAA+AGG | - | chr8_1:33278965-33278984 | Msa1190400:three_prime_UTR | 20.0% |
| !!! | AGAAAAATAACAACCTTTTT+TGG | + | chr8_1:33279499-33279518 | None:intergenic | 20.0% |
| !!! | ATTGTATACTTCTTTTTGAT+AGG | - | chr8_1:33279580-33279599 | Msa1190400:intron | 20.0% |
| !! | ATCAATATTTCAGAAAGAAA+CGG | + | chr8_1:33280010-33280029 | None:intergenic | 20.0% |
| !! | AATTCAGATATTTATTCTGT+TGG | - | chr8_1:33280041-33280060 | Msa1190400:intron | 20.0% |
| !! | AAATCATCTAACATAAACTT+TGG | + | chr8_1:33280284-33280303 | None:intergenic | 20.0% |
| !! | TTGAACTACTTGATATATAT+CGG | - | chr8_1:33280352-33280371 | Msa1190400:intron | 20.0% |
| !! | TTTATGAAAGGATTAAACTT+AGG | - | chr8_1:33280485-33280504 | Msa1190400:intron | 20.0% |
| !!! | AAAAGTTCAAGATTTTTGAA+CGG | + | chr8_1:33280802-33280821 | None:intergenic | 20.0% |
| !! | GAAAAGAATATTAACTATAC+TGG | + | chr8_1:33280852-33280871 | None:intergenic | 20.0% |
| !!! | ATAATGAATTTTGGCTATTT+TGG | + | chr8_1:33281102-33281121 | None:intergenic | 20.0% |
| !!! | ATAACACTGATAATGAATTT+TGG | + | chr8_1:33281111-33281130 | None:intergenic | 20.0% |
| !!! | GTTTTATTACTTGAATGATT+AGG | + | chr8_1:33282316-33282335 | None:intergenic | 20.0% |
| ! | ATTCTTGCTTGTTTATTTGT+AGG | - | chr8_1:33279135-33279154 | Msa1190400:three_prime_UTR | 25.0% |
| ! | TAGGTAATATCTTTGCATTT+GGG | - | chr8_1:33279154-33279173 | Msa1190400:three_prime_UTR | 25.0% |
| ! | TTTAGGAGAATTATGAGAAA+TGG | - | chr8_1:33279295-33279314 | Msa1190400:three_prime_UTR | 25.0% |
| ! | AAATTATCAGGTGATATAAG+AGG | + | chr8_1:33279397-33279416 | None:intergenic | 25.0% |
| !! | TATATCACCTGATAATTTGT+TGG | - | chr8_1:33279399-33279418 | Msa1190400:three_prime_UTR | 25.0% |
| ! | ATATTTGTGATCATACTAGT+CGG | - | chr8_1:33279638-33279657 | Msa1190400:intron | 25.0% |
| ! | TACAATTATAAACAATGGAG+AGG | + | chr8_1:33279744-33279763 | None:intergenic | 25.0% |
| ! | TAGTAAAACTCAGTATTACT+TGG | + | chr8_1:33279789-33279808 | None:intergenic | 25.0% |
| ! | CTATATAATTTCGCAGAAAT+TGG | - | chr8_1:33279846-33279865 | Msa1190400:intron | 25.0% |
| ! | ACAAATCAAACACAAAATGA+AGG | + | chr8_1:33280081-33280100 | None:intergenic | 25.0% |
| !!! | CATTTTGTGTTTGATTTGTT+AGG | - | chr8_1:33280082-33280101 | Msa1190400:intron | 25.0% |
| ! | TGAACTACTTGATATATATC+GGG | - | chr8_1:33280353-33280372 | Msa1190400:intron | 25.0% |
| !! | GTAAACTAAGTTTATCGATT+CGG | - | chr8_1:33280381-33280400 | Msa1190400:intron | 25.0% |
| !!! | GTCAACTTTTCATTTTTACT+AGG | - | chr8_1:33280448-33280467 | Msa1190400:intron | 25.0% |
| !! | AGAATGAAAGCTTTTATGAA+AGG | - | chr8_1:33280473-33280492 | Msa1190400:intron | 25.0% |
| ! | AAGATGAATGAAACCTAAAT+TGG | + | chr8_1:33280996-33281015 | None:intergenic | 25.0% |
| ! | TAGGTTTCATTCATCTTATA+AGG | - | chr8_1:33280999-33281018 | Msa1190400:intron | 25.0% |
| !! | TAAGGAAAGAACTTTGAAAA+TGG | + | chr8_1:33281038-33281057 | None:intergenic | 25.0% |
| !! | GTTCTTTCCTTAATTTTCTA+AGG | - | chr8_1:33281046-33281065 | Msa1190400:CDS | 25.0% |
| ! | AGTACTACCTTAGAAAATTA+AGG | + | chr8_1:33281056-33281075 | None:intergenic | 25.0% |
| ! | TTAGGATAAAGTTAAGATTG+TGG | + | chr8_1:33281169-33281188 | None:intergenic | 25.0% |
| !!! | AAAAACACCTTTTTCATTCT+AGG | - | chr8_1:33281201-33281220 | Msa1190400:intron | 25.0% |
| ! | GAACATAAAAAGAGACTAAA+AGG | + | chr8_1:33281253-33281272 | None:intergenic | 25.0% |
| ! | ATCAATTAAGCATAGCATTA+AGG | + | chr8_1:33281402-33281421 | None:intergenic | 25.0% |
| !! | AGAAGGAAATTTAACTTTGA+TGG | + | chr8_1:33281543-33281562 | None:intergenic | 25.0% |
| !! | TCAGTGCTTTATTATTTAGA+AGG | + | chr8_1:33281560-33281579 | None:intergenic | 25.0% |
| ! | TTTAAATATTCCATCGAAGT+AGG | - | chr8_1:33281754-33281773 | Msa1190400:CDS | 25.0% |
| ! | TCTGATTAAACTATCTTAGA+AGG | + | chr8_1:33281784-33281803 | None:intergenic | 25.0% |
| ! | AGTTTCAGACAACATATTTA+CGG | + | chr8_1:33282066-33282085 | None:intergenic | 25.0% |
| ! | TACTATTGAGTATATCTCAT+AGG | - | chr8_1:33282155-33282174 | Msa1190400:intron | 25.0% |
| ! | TATATTTAATAATACGGTCC+AGG | + | chr8_1:33282273-33282292 | None:intergenic | 25.0% |
| ACAATTATCCTCATTTCGTT+TGG | + | chr8_1:33278902-33278921 | None:intergenic | 30.0% | |
| ATCTTTACCAACTTCACAAA+TGG | + | chr8_1:33279022-33279041 | None:intergenic | 30.0% | |
| GTAGGTAATATCTTTGCATT+TGG | - | chr8_1:33279153-33279172 | Msa1190400:three_prime_UTR | 30.0% | |
| CTCATAATTCTCCTAAATGT+GGG | + | chr8_1:33279292-33279311 | None:intergenic | 30.0% | |
| TCTCATAATTCTCCTAAATG+TGG | + | chr8_1:33279293-33279312 | None:intergenic | 30.0% | |
| TGAATTGTTTGATCTGTTTG+TGG | - | chr8_1:33279362-33279381 | Msa1190400:three_prime_UTR | 30.0% | |
| GTTACAGCTGTTAATTCAAT+TGG | - | chr8_1:33279421-33279440 | Msa1190400:three_prime_UTR | 30.0% | |
| ! | TTTTGATAGGTGAGAATGTT+TGG | - | chr8_1:33279593-33279612 | Msa1190400:intron | 30.0% |
| GAGAATGTTTGGATTATTGA+TGG | - | chr8_1:33279604-33279623 | Msa1190400:intron | 30.0% | |
| TATTTGTGATCATACTAGTC+GGG | - | chr8_1:33279639-33279658 | Msa1190400:intron | 30.0% | |
| GTTGAAAGCGAAAGATAAAA+CGG | + | chr8_1:33279901-33279920 | None:intergenic | 30.0% | |
| GAGTAATCCATAAAGAAAGA+AGG | + | chr8_1:33279941-33279960 | None:intergenic | 30.0% | |
| !! | TTGATTTGTTAGGTACCAAA+TGG | - | chr8_1:33280092-33280111 | Msa1190400:intron | 30.0% |
| !! | TGATTTGTTAGGTACCAAAT+GGG | - | chr8_1:33280093-33280112 | Msa1190400:intron | 30.0% |
| ! | ACTTGATATATATCGGGTTT+TGG | - | chr8_1:33280359-33280378 | Msa1190400:intron | 30.0% |
| !! | ATTTAACTCCATTTCTAGCT+TGG | - | chr8_1:33280419-33280438 | Msa1190400:intron | 30.0% |
| TTAGTAGAGAACAGAAAGAA+TGG | + | chr8_1:33280527-33280546 | None:intergenic | 30.0% | |
| !!! | TGTCACTAACAGTTTTGAAA+GGG | - | chr8_1:33280561-33280580 | Msa1190400:intron | 30.0% |
| ! | TTTTGAACGGTTTACAACTA+TGG | + | chr8_1:33280789-33280808 | None:intergenic | 30.0% |
| ! | CCTTTTCTTAAGAAAACTGT+TGG | + | chr8_1:33280887-33280906 | None:intergenic | 30.0% |
| ! | CCAACAGTTTTCTTAAGAAA+AGG | - | chr8_1:33280884-33280903 | Msa1190400:intron | 30.0% |
| AAGGTAATATGTTCACTGAT+AGG | - | chr8_1:33280903-33280922 | Msa1190400:intron | 30.0% | |
| ! | AGATAAAGTGAGGTATTATG+AGG | - | chr8_1:33280938-33280957 | Msa1190400:intron | 30.0% |
| ! | GAAAGAACTTTGAAAATGGT+TGG | + | chr8_1:33281034-33281053 | None:intergenic | 30.0% |
| ATAGGTACCAGAAAATTGAA+GGG | + | chr8_1:33281143-33281162 | None:intergenic | 30.0% | |
| AAGTTAAGATTGTGGATGAT+AGG | + | chr8_1:33281161-33281180 | None:intergenic | 30.0% | |
| ! | TATCTAGGATAGTTTAATCG+AGG | + | chr8_1:33281308-33281327 | None:intergenic | 30.0% |
| TATATCCCACAAATACGAAT+TGG | + | chr8_1:33281347-33281366 | None:intergenic | 30.0% | |
| AATTCGTATTTGTGGGATAT+AGG | - | chr8_1:33281346-33281365 | Msa1190400:CDS | 30.0% | |
| !!! | TCACACTTTTTTCTTTGCAA+AGG | + | chr8_1:33281869-33281888 | None:intergenic | 30.0% |
| !!! | TTTGAGATCATTTTTTGTGC+AGG | + | chr8_1:33282020-33282039 | None:intergenic | 30.0% |
| AATGATCTCAAAGTCAAACA+TGG | - | chr8_1:33282028-33282047 | Msa1190400:intron | 30.0% | |
| ! | AATATGTTGTCTGAAACTAG+AGG | - | chr8_1:33282068-33282087 | Msa1190400:CDS | 30.0% |
| TGAATTGTAGACCCACATTT+AGG | - | chr8_1:33279278-33279297 | Msa1190400:three_prime_UTR | 35.0% | |
| TGTTTGATCTGTTTGTGGTA+TGG | - | chr8_1:33279367-33279386 | Msa1190400:three_prime_UTR | 35.0% | |
| GCTGTAACCAACAAATTATC+AGG | + | chr8_1:33279409-33279428 | None:intergenic | 35.0% | |
| CTATGCTGAGAAACCAAAAA+AGG | - | chr8_1:33279483-33279502 | Msa1190400:three_prime_UTR | 35.0% | |
| !! | GGATTATTGATGGCAGTTTT+TGG | - | chr8_1:33279614-33279633 | Msa1190400:intron | 35.0% |
| TCAAGCATCCAACTAACATT+CGG | + | chr8_1:33279694-33279713 | None:intergenic | 35.0% | |
| AGTTTGTGTGAATTCAAGCT+TGG | - | chr8_1:33279808-33279827 | Msa1190400:intron | 35.0% | |
| ACCATCTCCTTCTTTCTTTA+TGG | - | chr8_1:33279931-33279950 | Msa1190400:intron | 35.0% | |
| TCCATAAAGAAAGAAGGAGA+TGG | + | chr8_1:33279935-33279954 | None:intergenic | 35.0% | |
| AAACGGAGAAATGAGATGAA+AGG | + | chr8_1:33279993-33280012 | None:intergenic | 35.0% | |
| AAAACAGTACCTATCCCATT+TGG | + | chr8_1:33280110-33280129 | None:intergenic | 35.0% | |
| !! | AAATGGGATAGGTACTGTTT+TGG | - | chr8_1:33280109-33280128 | Msa1190400:intron | 35.0% |
| !! | AATGGGATAGGTACTGTTTT+GGG | - | chr8_1:33280110-33280129 | Msa1190400:intron | 35.0% |
| TATCCATACGACACTATCAA+GGG | + | chr8_1:33280197-33280216 | None:intergenic | 35.0% | |
| TTATCCATACGACACTATCA+AGG | + | chr8_1:33280198-33280217 | None:intergenic | 35.0% | |
| TGGATAATCTATGCTGACAA+AGG | - | chr8_1:33280211-33280230 | Msa1190400:intron | 35.0% | |
| ATATCAAGTAGTTCAACTCG+TGG | + | chr8_1:33280348-33280367 | None:intergenic | 35.0% | |
| ACAAAAGACCAAGCTAGAAA+TGG | + | chr8_1:33280430-33280449 | None:intergenic | 35.0% | |
| AAACTTAGGTACAGTGATAC+AGG | - | chr8_1:33280499-33280518 | Msa1190400:intron | 35.0% | |
| !!! | CTGTCACTAACAGTTTTGAA+AGG | - | chr8_1:33280560-33280579 | Msa1190400:intron | 35.0% |
| AAACATATTGCCTTTGTGAG+AGG | - | chr8_1:33280603-33280622 | Msa1190400:intron | 35.0% | |
| AACATATTGCCTTTGTGAGA+GGG | - | chr8_1:33280604-33280623 | Msa1190400:intron | 35.0% | |
| GTAGTTCTTCATGAAAAGAG+TGG | - | chr8_1:33280663-33280682 | Msa1190400:intron | 35.0% | |
| ! | TAGCTTTTAATGTCGCAAGT+TGG | + | chr8_1:33280728-33280747 | None:intergenic | 35.0% |
| ACTTGCGACATTAAAAGCTA+AGG | - | chr8_1:33280728-33280747 | Msa1190400:intron | 35.0% | |
| !!! | TTTTTTTTGAGGGAAAGCGA+AGG | - | chr8_1:33280763-33280782 | Msa1190400:intron | 35.0% |
| CATTAAGAGGAGATAAAGTG+AGG | - | chr8_1:33280928-33280947 | Msa1190400:intron | 35.0% | |
| AGGTAGTACTATTGTAACAG+AGG | - | chr8_1:33281066-33281085 | Msa1190400:CDS | 35.0% | |
| GATAGGTACCAGAAAATTGA+AGG | + | chr8_1:33281144-33281163 | None:intergenic | 35.0% | |
| ATCTGTGCCTAGAATGAAAA+AGG | + | chr8_1:33281211-33281230 | None:intergenic | 35.0% | |
| AGGATAGTTTAATCGAGGAA+CGG | + | chr8_1:33281303-33281322 | None:intergenic | 35.0% | |
| GAGAGCTAAACTTTCTATCT+AGG | + | chr8_1:33281323-33281342 | None:intergenic | 35.0% | |
| TCTCTCCAATTCGTATTTGT+GGG | - | chr8_1:33281339-33281358 | Msa1190400:CDS | 35.0% | |
| GGATATAGGTCAGTATTTAG+CGG | - | chr8_1:33281360-33281379 | Msa1190400:CDS | 35.0% | |
| CAACTAACATGTCATCACAT+AGG | + | chr8_1:33281612-33281631 | None:intergenic | 35.0% | |
| CTGTTTCAAAATTGTCCAGA+TGG | - | chr8_1:33281652-33281671 | Msa1190400:intron | 35.0% | |
| GTTGTATCAGATAGACAATG+AGG | + | chr8_1:33281916-33281935 | None:intergenic | 35.0% | |
| AAGAAAGAGATGTTACAGTG+AGG | + | chr8_1:33281997-33282016 | None:intergenic | 35.0% | |
| ATATCTCATAGGCTCATAAG+AGG | - | chr8_1:33282166-33282185 | Msa1190400:intron | 35.0% | |
| TATCTCATAGGCTCATAAGA+GGG | - | chr8_1:33282167-33282186 | Msa1190400:intron | 35.0% | |
| TCACCCTAATCATTCAAGTA+CGG | - | chr8_1:33282223-33282242 | Msa1190400:CDS | 35.0% | |
| GAACCGTACTTGAATGATTA+GGG | + | chr8_1:33282229-33282248 | None:intergenic | 35.0% | |
| TGAACCGTACTTGAATGATT+AGG | + | chr8_1:33282230-33282249 | None:intergenic | 35.0% | |
| GCTTACTCCATTTGTGAAGT+TGG | - | chr8_1:33279012-33279031 | Msa1190400:three_prime_UTR | 40.0% | |
| GGATCAACAGAAATGTTCTC+AGG | - | chr8_1:33279316-33279335 | Msa1190400:three_prime_UTR | 40.0% | |
| CATTCGGCGAATAGAACTAT+CGG | + | chr8_1:33279678-33279697 | None:intergenic | 40.0% | |
| TCTATTCGCCGAATGTTAGT+TGG | - | chr8_1:33279683-33279702 | Msa1190400:intron | 40.0% | |
| ! | TTAGTTGGATGCTTGAGTTG+TGG | - | chr8_1:33279698-33279717 | Msa1190400:intron | 40.0% |
| GAAGGAGATGGTCATTAAGA+AGG | + | chr8_1:33279923-33279942 | None:intergenic | 40.0% | |
| TGTTAGGTACCAAATGGGAT+AGG | - | chr8_1:33280098-33280117 | Msa1190400:intron | 40.0% | |
| TACAAGAGTTCATCTAGCGA+TGG | - | chr8_1:33280161-33280180 | Msa1190400:intron | 40.0% | |
| TCTATGCTGACAAAGGCAAA+AGG | - | chr8_1:33280218-33280237 | Msa1190400:intron | 40.0% | |
| TCACTGATAGGCTCATTAAG+AGG | - | chr8_1:33280915-33280934 | Msa1190400:intron | 40.0% | |
| CATGAGAGAGTTCTGTTTAG+TGG | - | chr8_1:33280963-33280982 | Msa1190400:intron | 40.0% | |
| GAGTTCTGTTTAGTGGTTCA+AGG | - | chr8_1:33280970-33280989 | Msa1190400:intron | 40.0% | |
| TAGTGGTTCAAGGCCAATTT+AGG | - | chr8_1:33280980-33280999 | Msa1190400:intron | 40.0% | |
| ! | ACTTCCACCCTTCAATTTTC+TGG | - | chr8_1:33281133-33281152 | Msa1190400:intron | 40.0% |
| CTCTCTCCAATTCGTATTTG+TGG | - | chr8_1:33281338-33281357 | Msa1190400:CDS | 40.0% | |
| AGAAGGAAATCCTACTTCGA+TGG | + | chr8_1:33281767-33281786 | None:intergenic | 40.0% | |
| ATCTCATAGGCTCATAAGAG+GGG | - | chr8_1:33282168-33282187 | Msa1190400:intron | 40.0% | |
| ATTCAAGTACGGTTCAGTTC+AGG | - | chr8_1:33282234-33282253 | Msa1190400:exon | 40.0% | |
| TTCAAGTACGGTTCAGTTCA+GGG | - | chr8_1:33282235-33282254 | Msa1190400:exon | 40.0% | |
| !! | GAAGTTGGTAAAGATGCAGC+TGG | - | chr8_1:33279027-33279046 | Msa1190400:three_prime_UTR | 45.0% |
| AAAGATGCAGCTGGAATTGC+TGG | - | chr8_1:33279036-33279055 | Msa1190400:three_prime_UTR | 45.0% | |
| !! | GAACCCTTGATAGTGTCGTA+TGG | - | chr8_1:33280191-33280210 | Msa1190400:intron | 45.0% |
| TCTTACTGTCCCTCTCACAA+AGG | + | chr8_1:33280616-33280635 | None:intergenic | 45.0% | |
| ACTACACTTTCATGCAGTGC+TGG | + | chr8_1:33280648-33280667 | None:intergenic | 45.0% | |
| GGTACCAGAAAATTGAAGGG+TGG | + | chr8_1:33281140-33281159 | None:intergenic | 45.0% | |
| GAAGACAGTTCAATGCCATC+TGG | + | chr8_1:33281670-33281689 | None:intergenic | 45.0% | |
| TCAAGTACGGTTCAGTTCAG+GGG | - | chr8_1:33282236-33282255 | Msa1190400:exon | 45.0% | |
| !! | TCAGGGGTATTGTTGAAACC+TGG | - | chr8_1:33282252-33282271 | Msa1190400:five_prime_UTR | 45.0% |
| !!! | ATATATTTTGATTATTAATT+TGG | - | chr8_1:33279246-33279265 | Msa1190400:three_prime_UTR | 5.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 33278893 | 33282352 | 33278893 | ID=Msa1190400;Name=Msa1190400 |
| chr8_1 | mRNA | 33278893 | 33282352 | 33278893 | ID=Msa1190400-mRNA-1;Parent=Msa1190400;Name=Msa1190400-mRNA-1;_AED=0.09;_eAED=0.09;_QI=104|1|1|1|0.83|0.71|7|704|235 |
| chr8_1 | exon | 33278893 | 33279574 | 33278893 | ID=Msa1190400-mRNA-1:exon:11207;Parent=Msa1190400-mRNA-1 |
| chr8_1 | exon | 33281006 | 33281141 | 33281006 | ID=Msa1190400-mRNA-1:exon:11206;Parent=Msa1190400-mRNA-1 |
| chr8_1 | exon | 33281264 | 33281383 | 33281264 | ID=Msa1190400-mRNA-1:exon:11205;Parent=Msa1190400-mRNA-1 |
| chr8_1 | exon | 33281485 | 33281643 | 33281485 | ID=Msa1190400-mRNA-1:exon:11204;Parent=Msa1190400-mRNA-1 |
| chr8_1 | exon | 33281741 | 33281957 | 33281741 | ID=Msa1190400-mRNA-1:exon:11203;Parent=Msa1190400-mRNA-1 |
| chr8_1 | exon | 33282052 | 33282088 | 33282052 | ID=Msa1190400-mRNA-1:exon:11202;Parent=Msa1190400-mRNA-1 |
| chr8_1 | exon | 33282188 | 33282352 | 33282188 | ID=Msa1190400-mRNA-1:exon:11201;Parent=Msa1190400-mRNA-1 |
| chr8_1 | five_prime_UTR | 33282249 | 33282352 | 33282249 | ID=Msa1190400-mRNA-1:five_prime_utr;Parent=Msa1190400-mRNA-1 |
| chr8_1 | CDS | 33282188 | 33282248 | 33282188 | ID=Msa1190400-mRNA-1:cds;Parent=Msa1190400-mRNA-1 |
| chr8_1 | CDS | 33282052 | 33282088 | 33282052 | ID=Msa1190400-mRNA-1:cds;Parent=Msa1190400-mRNA-1 |
| chr8_1 | CDS | 33281741 | 33281957 | 33281741 | ID=Msa1190400-mRNA-1:cds;Parent=Msa1190400-mRNA-1 |
| chr8_1 | CDS | 33281485 | 33281643 | 33281485 | ID=Msa1190400-mRNA-1:cds;Parent=Msa1190400-mRNA-1 |
| chr8_1 | CDS | 33281264 | 33281383 | 33281264 | ID=Msa1190400-mRNA-1:cds;Parent=Msa1190400-mRNA-1 |
| chr8_1 | CDS | 33281028 | 33281141 | 33281028 | ID=Msa1190400-mRNA-1:cds;Parent=Msa1190400-mRNA-1 |
| chr8_1 | three_prime_UTR | 33281006 | 33281027 | 33281006 | ID=Msa1190400-mRNA-1:three_prime_utr;Parent=Msa1190400-mRNA-1 |
| chr8_1 | three_prime_UTR | 33278893 | 33279574 | 33278893 | ID=Msa1190400-mRNA-1:three_prime_utr;Parent=Msa1190400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
