AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0274430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0274430 MtrunA17_Chr2g0284221 91.447 608 52 0 1 608 1 608 0.0 1072
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 125 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCCGTTCTCTAATAATT+TGG 0.097174 2_3:+6257011 Msa0274430:CDS
CTATTCATATCTGGATAATT+AGG 0.167640 2_3:+6259247 Msa0274430:three_prime_UTR
ACATATTATCAACTAATTAT+TGG 0.184086 2_3:+6259018 Msa0274430:three_prime_UTR
ACCAACTTCATTGCCGTTCT+TGG 0.193830 2_3:-6258184 None:intergenic
TTATCTTGATAGATCATTAA+AGG 0.205521 2_3:+6257878 Msa0274430:CDS
CTGAAGCAGAACGTTGTTAT+AGG 0.249987 2_3:+6258387 Msa0274430:CDS
CCACAGTTCTTTCCTGGTAT+TGG 0.271242 2_3:+6257177 Msa0274430:CDS
GAATCAAGCAAAGAACTAAA+AGG 0.274738 2_3:-6255020 None:intergenic
GTTGATCTTCTATTCATATC+TGG 0.283271 2_3:+6259238 Msa0274430:three_prime_UTR
TAAAACTTATCATTGGCTTA+TGG 0.286687 2_3:+6258415 Msa0274430:CDS
ACATCTTCAACAATTGTAAA+AGG 0.290927 2_3:+6254853 Msa0274430:five_prime_UTR
AGTAGTAAAGTACAATTATT+TGG 0.296272 2_3:+6254728 Msa0274430:five_prime_UTR
TTGAAGTTGATGTGCTTAAT+TGG 0.306162 2_3:+6255186 Msa0274430:CDS
TCAGATTATTGATTATTTGC+AGG 0.331084 2_3:-6257779 None:intergenic
AATCCGTTCTCTAATAATTT+GGG 0.332628 2_3:+6257012 Msa0274430:CDS
TATCTGCAAAATGGTAATAC+TGG 0.337162 2_3:+6258090 Msa0274430:CDS
CGAGCTCCACAGTTCTTTCC+TGG 0.337750 2_3:+6257171 Msa0274430:CDS
AGATAGAGCTGGTTTGGATT+TGG 0.341628 2_3:-6258072 None:intergenic
GTCATCATGATTGTCAGAAT+TGG 0.349089 2_3:-6254997 None:intergenic
ATTACCTTAACGTCAGGTTT+TGG 0.356212 2_3:-6257660 None:intergenic
AACCAGCTCTATCTGCAAAA+TGG 0.360107 2_3:+6258081 Msa0274430:CDS
GGATCCACAGAGATGCTTCT+TGG 0.363335 2_3:-6257384 None:intergenic
ACCCAGAGGAATTGTTGTTT+TGG 0.364863 2_3:+6258348 Msa0274430:CDS
TCCTGGTATTGGATATGTTA+AGG 0.376374 2_3:+6257188 Msa0274430:CDS
GTTGGAGAACGACCCTTTGC+AGG 0.376951 2_3:-6257552 None:intergenic
AACAACAAATTAGTAGTTAC+AGG 0.378198 2_3:-6257240 None:intergenic
GGAAATTTAAAACTTATCAT+TGG 0.389447 2_3:+6258408 Msa0274430:CDS
GCTATAGTTTCTAATGTGAT+TGG 0.393230 2_3:+6258117 Msa0274430:CDS
TTCCAAAACAACAATTCCTC+TGG 0.407386 2_3:-6258350 None:intergenic
CTGATGTGGATTCTCCTTGT+TGG 0.416929 2_3:+6257046 Msa0274430:CDS
TCAGAATTGGAAGAGGGCTT+TGG 0.418484 2_3:-6254984 None:intergenic
GTAACTACTAATTTGTTGTT+GGG 0.420493 2_3:+6257243 Msa0274430:CDS
GATGTTGATGACTTTGTAAA+GGG 0.423416 2_3:+6257486 Msa0274430:CDS
TGTAACTACTAATTTGTTGT+TGG 0.428051 2_3:+6257242 Msa0274430:CDS
TCTTGTAGCTTCAGGTCATT+CGG 0.429260 2_3:+6258285 Msa0274430:intron
GACATTCAAGGGGCTCGAAA+TGG 0.429304 2_3:+6258026 Msa0274430:intron
CGCTAGTAGGTCAGCGAATG+AGG 0.432078 2_3:+6257524 Msa0274430:CDS
CAACATCAACGGAATAGAAA+TGG 0.444445 2_3:+6257341 Msa0274430:CDS
CAGGTCATTCGGAGAAGTCT+AGG 0.444572 2_3:+6258296 Msa0274430:CDS
ATTCATGAATCCTATGGATC+TGG 0.444654 2_3:+6259070 Msa0274430:three_prime_UTR
ACAAACTAGTTTCAGTTCAA+AGG 0.446234 2_3:+6255049 Msa0274430:CDS
CTGAAAATCCCAGCGCTAGT+AGG 0.447730 2_3:+6257511 Msa0274430:CDS
TGAGTCTAGCTCCTTTCTTA+AGG 0.447790 2_3:+6256924 Msa0274430:CDS
TACTAATTTGTTGTTGGGAG+AGG 0.458062 2_3:+6257248 Msa0274430:CDS
ATCTCCAAAACCTGACGTTA+AGG 0.461121 2_3:+6257656 Msa0274430:CDS
GAAGAAGAAAATTAGTTAAG+TGG 0.473997 2_3:-6259130 None:intergenic
GTATTGACTTGGAAGATGTT+TGG 0.476389 2_3:+6254795 Msa0274430:five_prime_UTR
GAAGAGCGATTGAGAGTGAA+GGG 0.476653 2_3:-6254957 None:intergenic
ATTCGCTGACCTACTAGCGC+TGG 0.479453 2_3:-6257520 None:intergenic
TTTGCATCTAGCAGTGGAGG+TGG 0.480201 2_3:+6258159 Msa0274430:CDS
AACAACACCTGTACAATTGT+GGG 0.481405 2_3:+6256856 Msa0274430:CDS
CCAACCATTACCTTAACGTC+AGG 0.484558 2_3:-6257666 None:intergenic
GATGTGAACATGTTTCAAAA+AGG 0.485335 2_3:+6255239 Msa0274430:CDS
GAAGGAAGCAAGAAACTTCA+AGG 0.488132 2_3:+6254773 Msa0274430:five_prime_UTR
GATGATGATGTCGGTGATGT+TGG 0.491166 2_3:-6257570 None:intergenic
GGCTCTAAGTTTAATTCCAT+CGG 0.493635 2_3:+6257080 Msa0274430:CDS
GAACGGCAATGAAGTTGGTC+AGG 0.493848 2_3:+6258188 Msa0274430:CDS
AATCAAGCAAAGAACTAAAA+GGG 0.493888 2_3:-6255019 None:intergenic
CGATGTTGATGACTTTGTAA+AGG 0.495336 2_3:+6257485 Msa0274430:CDS
AGGAAGACAACATTCTACTA+TGG 0.497073 2_3:+6259105 Msa0274430:three_prime_UTR
AAAACCTGACGTTAAGGTAA+TGG 0.497832 2_3:+6257662 Msa0274430:CDS
CTTTCTTAAGGCACAAAACA+AGG 0.498676 2_3:+6256936 Msa0274430:CDS
CAAACTAGTTTCAGTTCAAA+GGG 0.503600 2_3:+6255050 Msa0274430:CDS
TGGAGATTCAATTAAAGACT+TGG 0.504370 2_3:-6257640 None:intergenic
TGTGGATTCTCCTTGTTGGA+AGG 0.506218 2_3:+6257050 Msa0274430:CDS
AAACAACACCTGTACAATTG+TGG 0.510308 2_3:+6256855 Msa0274430:CDS
TATCATTGGCTTATGGAAGC+TGG 0.511955 2_3:+6258422 Msa0274430:CDS
ACCAAGAACGGCAATGAAGT+TGG 0.514005 2_3:+6258183 Msa0274430:CDS
ATTTCAACTTTGCCAGCTCA+AGG 0.519701 2_3:+6255104 Msa0274430:CDS
ATTGTGAACATGATCTTAGT+AGG 0.520511 2_3:+6257748 Msa0274430:CDS
GGTTTGGATTTGGAACAGTA+AGG 0.524431 2_3:-6258062 None:intergenic
TAACTGATTCATGAATCCTA+TGG 0.531363 2_3:+6259064 Msa0274430:three_prime_UTR
ATGCAAAAGTAGGCGGTGAA+AGG 0.532881 2_3:+6257811 Msa0274430:CDS
AGAAGAGCGATTGAGAGTGA+AGG 0.533447 2_3:-6254958 None:intergenic
AGTGGAGGTGGCACCAAGAA+CGG 0.535431 2_3:+6258171 Msa0274430:CDS
AAACTTTCATCACCTTGAGC+TGG 0.539485 2_3:-6255116 None:intergenic
TTCGCTGACCTACTAGCGCT+GGG 0.542567 2_3:-6257519 None:intergenic
AAGAAGAAAATTAGTTAAGT+GGG 0.542898 2_3:-6259129 None:intergenic
CATTTCTATTCCGTTGATGT+TGG 0.543726 2_3:-6257340 None:intergenic
TGATAACAGTCCAGATCCAT+AGG 0.548372 2_3:-6259080 None:intergenic
GTTTGGATTTGGAACAGTAA+GGG 0.554673 2_3:-6258061 None:intergenic
ATCTACAAACTACCAAGCAC+TGG 0.555531 2_3:-6258983 None:intergenic
GAAACTTCAAGGTATTGACT+TGG 0.557829 2_3:+6254784 Msa0274430:five_prime_UTR
GTGGATTCTCCTTGTTGGAA+GGG 0.558745 2_3:+6257051 Msa0274430:CDS
AGGTCATTCGGAGAAGTCTA+GGG 0.562459 2_3:+6258297 Msa0274430:CDS
ACAGATTGTGAAATTTCCGA+TGG 0.569930 2_3:-6257096 None:intergenic
GACATTCTATCGAATTCTGA+AGG 0.570760 2_3:+6256883 Msa0274430:CDS
GACATCATCATCTCAAGCTA+AGG 0.572158 2_3:+6257581 Msa0274430:CDS
GGTATTGGATATGTTAAGGA+CGG 0.572974 2_3:+6257192 Msa0274430:CDS
TCCAAAACAACAATTCCTCT+GGG 0.577956 2_3:-6258349 None:intergenic
TATTTGCAGGAGTTGAGTCA+AGG 0.580540 2_3:-6257848 None:intergenic
GATGGAATTAAACTTAGAGC+CGG 0.581730 2_3:-6257078 None:intergenic
ATTATTTGGTAGATAAACCA+GGG 0.582760 2_3:+6254742 Msa0274430:five_prime_UTR
ATGATTGTCAGAATTGGAAG+AGG 0.584015 2_3:-6254991 None:intergenic
TTGGCTTATGGAAGCTGGTG+TGG 0.584648 2_3:+6258427 Msa0274430:CDS
TTGGAGAACGACCCTTTGCA+GGG 0.585408 2_3:-6257551 None:intergenic
CCCTTTCTAAAAGTGTCTGA+TGG 0.588863 2_3:+6256823 Msa0274430:CDS
AATTATTTGGTAGATAAACC+AGG 0.589090 2_3:+6254741 Msa0274430:five_prime_UTR
CAGTATTCAACCAACATCAA+CGG 0.591588 2_3:+6257330 Msa0274430:CDS
TATCAGTTGATATCTTCAGT+GGG 0.593193 2_3:-6256963 None:intergenic
TCACCCAAATTATTAGAGAA+CGG 0.595772 2_3:-6257015 None:intergenic
GGATTCAACACATCAACGGC+AGG 0.596335 2_3:-6256802 None:intergenic
CATACTCATGAAAACTGTCA+TGG 0.606687 2_3:+6257272 Msa0274430:CDS
CCTGACGTTAAGGTAATGGT+TGG 0.609803 2_3:+6257666 Msa0274430:CDS
AGGTGACACTTACCAGTGCT+TGG 0.612310 2_3:+6258971 Msa0274430:exon
GCCGGTGTGCCCTTCCAACA+AGG 0.618878 2_3:-6257060 None:intergenic
GGAAAGAACTGTGGAGCTCG+AGG 0.619071 2_3:-6257168 None:intergenic
TGATTGTCAGAATTGGAAGA+GGG 0.619486 2_3:-6254990 None:intergenic
GGATCTGGACTGTTATCAAG+AGG 0.622838 2_3:+6259085 Msa0274430:three_prime_UTR
TCCTTGTTGGAAGGGCACAC+CGG 0.623669 2_3:+6257059 Msa0274430:CDS
TCCTTAACATATCCAATACC+AGG 0.627311 2_3:-6257189 None:intergenic
TAGATCATTAAAGGTTACCA+AGG 0.638742 2_3:+6257887 Msa0274430:CDS
GGGTGATAGTGACACTGATG+TGG 0.639954 2_3:+6257032 Msa0274430:CDS
ATATCAGTTGATATCTTCAG+TGG 0.649663 2_3:-6256964 None:intergenic
ATAGAATGTGAATTTAGCAG+AGG 0.659245 2_3:-6257405 None:intergenic
TGAATCAACTCCGTCCACAC+AGG 0.663059 2_3:-6257724 None:intergenic
AAAGGGATTCAACACATCAA+CGG 0.665270 2_3:-6256806 None:intergenic
CCAATACCAGGAAAGAACTG+TGG 0.670251 2_3:-6257177 None:intergenic
TCTAATGTGATTGGTCAGAG+TGG 0.670664 2_3:+6258126 Msa0274430:CDS
TGATCCAAGAAGCATCTCTG+TGG 0.683600 2_3:+6257380 Msa0274430:CDS
TGACAAACAAATGCACCCAG+AGG 0.683639 2_3:+6258334 Msa0274430:CDS
ATCAGTTGATATCTTCAGTG+GGG 0.704864 2_3:-6256962 None:intergenic
TTATTTGGTAGATAAACCAG+GGG 0.721542 2_3:+6254743 Msa0274430:five_prime_UTR
TTAGCTTGAGATGATGATGT+CGG 0.724297 2_3:-6257579 None:intergenic
TATTTGGTAGATAAACCAGG+GGG 0.782772 2_3:+6254744 Msa0274430:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGTTTTTTAATTAAACAA+AGG - chr2_3:6254671-6254690 None:intergenic 10.0%
!!! GAGAAGTTTATATATTTTTT+TGG + chr2_3:6255399-6255418 Msa0274430:intron 15.0%
!!! TTTTCATAAAAAAACTTATC+TGG + chr2_3:6255495-6255514 Msa0274430:intron 15.0%
!! TTATCTGCAAATATAAAATT+TGG + chr2_3:6256234-6256253 Msa0274430:intron 15.0%
!! TTAAAAATAGTTTCAAGAAT+AGG - chr2_3:6256415-6256434 None:intergenic 15.0%
!! ACATATTATCAACTAATTAT+TGG + chr2_3:6259018-6259037 Msa0274430:three_prime_UTR 15.0%
!! AGTAGTAAAGTACAATTATT+TGG + chr2_3:6254728-6254747 Msa0274430:five_prime_UTR 20.0%
!!! TCATATCTTTGTTTTTTGTT+TGG - chr2_3:6254899-6254918 None:intergenic 20.0%
!!! TTTAAAAAATGTCTAAAGCA+AGG - chr2_3:6255335-6255354 None:intergenic 20.0%
!!! TTGCTTTAGACATTTTTTAA+AGG + chr2_3:6255334-6255353 Msa0274430:intron 20.0%
!!! TGCTTTAGACATTTTTTAAA+GGG + chr2_3:6255335-6255354 Msa0274430:intron 20.0%
!! TATTATATATCATCATAAGC+TGG + chr2_3:6255967-6255986 Msa0274430:intron 20.0%
!!! AATATTGATATTTGAAGTGA+TGG + chr2_3:6256500-6256519 Msa0274430:intron 20.0%
!! TTTAACTAAAAAAACACTAG+TGG - chr2_3:6256667-6256686 None:intergenic 20.0%
!!! AAAGTATTATGTTTTTCTGT+TGG - chr2_3:6257144-6257163 None:intergenic 20.0%
!!! ATCTCTAGTAGATTTTAATA+TGG + chr2_3:6257299-6257318 Msa0274430:CDS 20.0%
!!! TCTCTAGTAGATTTTAATAT+GGG + chr2_3:6257300-6257319 Msa0274430:CDS 20.0%
!! AAAGAAAAACTTGTAACTAT+AGG + chr2_3:6257462-6257481 Msa0274430:CDS 20.0%
!!! AATGATTTTAATGCAAAAGT+AGG + chr2_3:6257801-6257820 Msa0274430:CDS 20.0%
!! TTATCTTGATAGATCATTAA+AGG + chr2_3:6257878-6257897 Msa0274430:CDS 20.0%
!!! AATTGTTGTTTTGGAATTTA+TGG + chr2_3:6258357-6258376 Msa0274430:CDS 20.0%
!!! GGAAATTTAAAACTTATCAT+TGG + chr2_3:6258408-6258427 Msa0274430:CDS 20.0%
!! TATATTATGCATGCTAAAAT+GGG + chr2_3:6258908-6258927 Msa0274430:intron 20.0%
!! AAGAAGAAAATTAGTTAAGT+GGG - chr2_3:6259132-6259151 None:intergenic 20.0%
! AATTATTTGGTAGATAAACC+AGG + chr2_3:6254741-6254760 Msa0274430:five_prime_UTR 25.0%
! ATTATTTGGTAGATAAACCA+GGG + chr2_3:6254742-6254761 Msa0274430:five_prime_UTR 25.0%
!!! TGTTTTGATGAAAGGAAAAT+TGG - chr2_3:6254836-6254855 None:intergenic 25.0%
! ACATCTTCAACAATTGTAAA+AGG + chr2_3:6254853-6254872 Msa0274430:five_prime_UTR 25.0%
! AATCAAGCAAAGAACTAAAA+GGG - chr2_3:6255022-6255041 None:intergenic 25.0%
!! TTTTATGCAATTCCAGAAAA+GGG - chr2_3:6255157-6255176 None:intergenic 25.0%
!! TTTTTATGCAATTCCAGAAA+AGG - chr2_3:6255158-6255177 None:intergenic 25.0%
!!! TTTCTGGAATTGCATAAAAA+TGG + chr2_3:6255158-6255177 Msa0274430:CDS 25.0%
! TAATACCATCTTAGAATTCA+AGG + chr2_3:6255692-6255711 Msa0274430:intron 25.0%
!!! GTTTTGTAAGTTTGAGTTTA+GGG - chr2_3:6255722-6255741 None:intergenic 25.0%
!!! AGTTTTGTAAGTTTGAGTTT+AGG - chr2_3:6255723-6255742 None:intergenic 25.0%
! TAAACTCAAACTTACAAAAC+TGG + chr2_3:6255722-6255741 Msa0274430:intron 25.0%
!! TAGTTGACTTTGATTTCTAA+AGG - chr2_3:6256207-6256226 None:intergenic 25.0%
! TCTGCAAATATAAAATTTGG+AGG + chr2_3:6256237-6256256 Msa0274430:intron 25.0%
!!! GAGTCATTTTATTTCTATCT+TGG - chr2_3:6256381-6256400 None:intergenic 25.0%
! AAATCCGTTCTCTAATAATT+TGG + chr2_3:6257011-6257030 Msa0274430:CDS 25.0%
! AATCCGTTCTCTAATAATTT+GGG + chr2_3:6257012-6257031 Msa0274430:CDS 25.0%
! AACAACAAATTAGTAGTTAC+AGG - chr2_3:6257243-6257262 None:intergenic 25.0%
!!! TGTAACTACTAATTTGTTGT+TGG + chr2_3:6257242-6257261 Msa0274430:CDS 25.0%
!!! GTAACTACTAATTTGTTGTT+GGG + chr2_3:6257243-6257262 Msa0274430:CDS 25.0%
!! GATCTTCTAAAAAGATTTGA+AGG + chr2_3:6257612-6257631 Msa0274430:CDS 25.0%
!! TCAGATTATTGATTATTTGC+AGG - chr2_3:6257782-6257801 None:intergenic 25.0%
! AGATAAAAAGAACTATTTGC+AGG - chr2_3:6257864-6257883 None:intergenic 25.0%
! AATATAGATCATACATACCT+TGG - chr2_3:6257907-6257926 None:intergenic 25.0%
! AAAACAAACAGATTTGATTC+TGG - chr2_3:6258239-6258258 None:intergenic 25.0%
!!! TAAAACTTATCATTGGCTTA+TGG + chr2_3:6258415-6258434 Msa0274430:CDS 25.0%
! TGTAAATTGCAAAAATGTTG+CGG + chr2_3:6258451-6258470 Msa0274430:CDS 25.0%
!!! CTACTTGCTATAGTATTTTT+AGG - chr2_3:6258489-6258508 None:intergenic 25.0%
!! ATTATTTCCATAAGCTCTTT+TGG + chr2_3:6258641-6258660 Msa0274430:intron 25.0%
! CTATATTATGCATGCTAAAA+TGG + chr2_3:6258907-6258926 Msa0274430:intron 25.0%
!!! GATTGTGTATTTCTATTTTC+AGG + chr2_3:6258940-6258959 Msa0274430:intron 25.0%
! GAAGAAGAAAATTAGTTAAG+TGG - chr2_3:6259133-6259152 None:intergenic 25.0%
!! CTTAACTAATTTTCTTCTTC+TGG + chr2_3:6259133-6259152 Msa0274430:three_prime_UTR 25.0%
! CTATTCATATCTGGATAATT+AGG + chr2_3:6259247-6259266 Msa0274430:three_prime_UTR 25.0%
TTATTTGGTAGATAAACCAG+GGG + chr2_3:6254743-6254762 Msa0274430:five_prime_UTR 30.0%
!!! GTTGAAGATGTTTTGATGAA+AGG - chr2_3:6254844-6254863 None:intergenic 30.0%
GAATCAAGCAAAGAACTAAA+AGG - chr2_3:6255023-6255042 None:intergenic 30.0%
! ACAAACTAGTTTCAGTTCAA+AGG + chr2_3:6255049-6255068 Msa0274430:CDS 30.0%
! CAAACTAGTTTCAGTTCAAA+GGG + chr2_3:6255050-6255069 Msa0274430:CDS 30.0%
!! TTGAAGTTGATGTGCTTAAT+TGG + chr2_3:6255186-6255205 Msa0274430:CDS 30.0%
GATGTGAACATGTTTCAAAA+AGG + chr2_3:6255239-6255258 Msa0274430:CDS 30.0%
AGCTATTCTTTCATTGTTAG+AGG - chr2_3:6255459-6255478 None:intergenic 30.0%
!!! GAAACCTTTTTTTTTTGTGG+TGG + chr2_3:6255543-6255562 Msa0274430:intron 30.0%
!!! TTTTTTTTTTGTGGTGGCTA+GGG + chr2_3:6255549-6255568 Msa0274430:intron 30.0%
CATAAAATATGCAAGGTTTG+GGG - chr2_3:6255581-6255600 None:intergenic 30.0%
GCATAAAATATGCAAGGTTT+GGG - chr2_3:6255582-6255601 None:intergenic 30.0%
TGCATAAAATATGCAAGGTT+TGG - chr2_3:6255583-6255602 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG - chr2_3:6255588-6255607 None:intergenic 30.0%
TGTGACAATGTGTTTATAAG+TGG - chr2_3:6255768-6255787 None:intergenic 30.0%
TCTTAGTTTCCCTATTACAT+TGG + chr2_3:6256021-6256040 Msa0274430:intron 30.0%
AGTGAGATTCCAATGTAATA+GGG - chr2_3:6256033-6256052 None:intergenic 30.0%
TAGTGAGATTCCAATGTAAT+AGG - chr2_3:6256034-6256053 None:intergenic 30.0%
! GCATGAATTTTATTGCTGAA+AGG - chr2_3:6256087-6256106 None:intergenic 30.0%
CTAAGAGTGAAGAATTACAA+AGG + chr2_3:6256138-6256157 Msa0274430:intron 30.0%
ATGCTCTACAGAAATTGTTT+AGG + chr2_3:6256173-6256192 Msa0274430:intron 30.0%
TCAACTAACCAATTTGAAGA+TGG - chr2_3:6256310-6256329 None:intergenic 30.0%
!! TGATGGAAATGTTTTTGCTA+CGG + chr2_3:6256517-6256536 Msa0274430:intron 30.0%
GACAAATAAATGAGAAACTG+TGG + chr2_3:6256760-6256779 Msa0274430:intron 30.0%
! TATCAGTTGATATCTTCAGT+GGG - chr2_3:6256966-6256985 None:intergenic 30.0%
! ATATCAGTTGATATCTTCAG+TGG - chr2_3:6256967-6256986 None:intergenic 30.0%
!! TTATTAGAGAACGGATTTTG+AGG - chr2_3:6257009-6257028 None:intergenic 30.0%
TCACCCAAATTATTAGAGAA+CGG - chr2_3:6257018-6257037 None:intergenic 30.0%
ATAGAATGTGAATTTAGCAG+AGG - chr2_3:6257408-6257427 None:intergenic 30.0%
!! GATGTTGATGACTTTGTAAA+GGG + chr2_3:6257486-6257505 Msa0274430:CDS 30.0%
TGGAGATTCAATTAAAGACT+TGG - chr2_3:6257643-6257662 None:intergenic 30.0%
ATTGTGAACATGATCTTAGT+AGG + chr2_3:6257748-6257767 Msa0274430:CDS 30.0%
!! GATTTTAATGCAAAAGTAGG+CGG + chr2_3:6257804-6257823 Msa0274430:CDS 30.0%
TAGATCATTAAAGGTTACCA+AGG + chr2_3:6257887-6257906 Msa0274430:CDS 30.0%
GAGCAGAGAATGAAATAAAA+GGG - chr2_3:6257968-6257987 None:intergenic 30.0%
TGAGCAGAGAATGAAATAAA+AGG - chr2_3:6257969-6257988 None:intergenic 30.0%
TATCTGCAAAATGGTAATAC+TGG + chr2_3:6258090-6258109 Msa0274430:CDS 30.0%
GCTATAGTTTCTAATGTGAT+TGG + chr2_3:6258117-6258136 Msa0274430:CDS 30.0%
TATGGAAACAACTTATGACA+TGG + chr2_3:6258601-6258620 Msa0274430:intron 30.0%
AAGTTATCCAAAAGAGCTTA+TGG - chr2_3:6258651-6258670 None:intergenic 30.0%
TTAAGCTGTATATCCAAACA+AGG + chr2_3:6258787-6258806 Msa0274430:intron 30.0%
TATATCCAAACAAGGTCTAT+AGG + chr2_3:6258795-6258814 Msa0274430:intron 30.0%
!! ATTTCTATTTTCAGGAGTTG+TGG + chr2_3:6258948-6258967 Msa0274430:intron 30.0%
! TAACTGATTCATGAATCCTA+TGG + chr2_3:6259064-6259083 Msa0274430:three_prime_UTR 30.0%
GTTGATCTTCTATTCATATC+TGG + chr2_3:6259238-6259257 Msa0274430:three_prime_UTR 30.0%
TATTTGGTAGATAAACCAGG+GGG + chr2_3:6254744-6254763 Msa0274430:five_prime_UTR 35.0%
!! GAAACTTCAAGGTATTGACT+TGG + chr2_3:6254784-6254803 Msa0274430:five_prime_UTR 35.0%
!! GTATTGACTTGGAAGATGTT+TGG + chr2_3:6254795-6254814 Msa0274430:five_prime_UTR 35.0%
TGATTGTCAGAATTGGAAGA+GGG - chr2_3:6254993-6255012 None:intergenic 35.0%
ATGATTGTCAGAATTGGAAG+AGG - chr2_3:6254994-6255013 None:intergenic 35.0%
GTCATCATGATTGTCAGAAT+TGG - chr2_3:6255000-6255019 None:intergenic 35.0%
!! TTTTGAAGAACACCCTTTTC+TGG + chr2_3:6255142-6255161 Msa0274430:CDS 35.0%
CATTGTTAGAGGAACGATTA+AGG - chr2_3:6255448-6255467 None:intergenic 35.0%
! AACTTATCTGGAGCATAACT+TGG + chr2_3:6255507-6255526 Msa0274430:intron 35.0%
!!! GCGGAAACCTTTTTTTTTTG+TGG + chr2_3:6255540-6255559 Msa0274430:intron 35.0%
CTAGCCACCACAAAAAAAAA+AGG - chr2_3:6255550-6255569 None:intergenic 35.0%
!!! CTTTTTTTTTTGTGGTGGCT+AGG + chr2_3:6255548-6255567 Msa0274430:intron 35.0%
TACTATCAGGTTTCCGATAT+AGG - chr2_3:6255639-6255658 None:intergenic 35.0%
TATATCGGAAACCTGATAGT+AGG + chr2_3:6255638-6255657 Msa0274430:intron 35.0%
GAGCTTATCCAAGATCTATT+GGG - chr2_3:6255672-6255691 None:intergenic 35.0%
AGAGCTTATCCAAGATCTAT+TGG - chr2_3:6255673-6255692 None:intergenic 35.0%
! GACAACCTTGAATTCTAAGA+TGG - chr2_3:6255700-6255719 None:intergenic 35.0%
!! TACTTTTAAGAGTCCCATGT+TGG - chr2_3:6255802-6255821 None:intergenic 35.0%
GTAATTCTTCACTCTTAGAG+AGG - chr2_3:6256136-6256155 None:intergenic 35.0%
CACTGTATACAGTGGTAAAT+TGG + chr2_3:6256457-6256476 Msa0274430:intron 35.0%
TCAGTTATGCTTCTGAGTTA+GGG + chr2_3:6256611-6256630 Msa0274430:intron 35.0%
ATCAAAATCTTGCGCCAATT+TGG + chr2_3:6256635-6256654 Msa0274430:intron 35.0%
AAAGGGATTCAACACATCAA+CGG - chr2_3:6256809-6256828 None:intergenic 35.0%
!! CCATCAGACACTTTTAGAAA+GGG - chr2_3:6256826-6256845 None:intergenic 35.0%
AAACAACACCTGTACAATTG+TGG + chr2_3:6256855-6256874 Msa0274430:CDS 35.0%
AACAACACCTGTACAATTGT+GGG + chr2_3:6256856-6256875 Msa0274430:CDS 35.0%
GACATTCTATCGAATTCTGA+AGG + chr2_3:6256883-6256902 Msa0274430:CDS 35.0%
!!! CTTGTTTTGTGCCTTAAGAA+AGG - chr2_3:6256938-6256957 None:intergenic 35.0%
CTTTCTTAAGGCACAAAACA+AGG + chr2_3:6256936-6256955 Msa0274430:CDS 35.0%
! ATCAGTTGATATCTTCAGTG+GGG - chr2_3:6256965-6256984 None:intergenic 35.0%
GATGGAATTAAACTTAGAGC+CGG - chr2_3:6257081-6257100 None:intergenic 35.0%
!! GGCTCTAAGTTTAATTCCAT+CGG + chr2_3:6257080-6257099 Msa0274430:CDS 35.0%
ACAGATTGTGAAATTTCCGA+TGG - chr2_3:6257099-6257118 None:intergenic 35.0%
! TCCTGGTATTGGATATGTTA+AGG + chr2_3:6257188-6257207 Msa0274430:CDS 35.0%
TCCTTAACATATCCAATACC+AGG - chr2_3:6257192-6257211 None:intergenic 35.0%
! GGTATTGGATATGTTAAGGA+CGG + chr2_3:6257192-6257211 Msa0274430:CDS 35.0%
!! TACTAATTTGTTGTTGGGAG+AGG + chr2_3:6257248-6257267 Msa0274430:CDS 35.0%
CATACTCATGAAAACTGTCA+TGG + chr2_3:6257272-6257291 Msa0274430:CDS 35.0%
CAGTATTCAACCAACATCAA+CGG + chr2_3:6257330-6257349 Msa0274430:CDS 35.0%
CATTTCTATTCCGTTGATGT+TGG - chr2_3:6257343-6257362 None:intergenic 35.0%
CAACATCAACGGAATAGAAA+TGG + chr2_3:6257341-6257360 Msa0274430:CDS 35.0%
!! CGATGTTGATGACTTTGTAA+AGG + chr2_3:6257485-6257504 Msa0274430:CDS 35.0%
! TTAGCTTGAGATGATGATGT+CGG - chr2_3:6257582-6257601 None:intergenic 35.0%
! ATTACCTTAACGTCAGGTTT+TGG - chr2_3:6257663-6257682 None:intergenic 35.0%
AAAACCTGACGTTAAGGTAA+TGG + chr2_3:6257662-6257681 Msa0274430:CDS 35.0%
!! TGAAATAAAAGGGCACTGTT+AGG - chr2_3:6257958-6257977 None:intergenic 35.0%
TGCATATATGTCGACATTCA+AGG + chr2_3:6258014-6258033 Msa0274430:intron 35.0%
GCATATATGTCGACATTCAA+GGG + chr2_3:6258015-6258034 Msa0274430:intron 35.0%
CATATATGTCGACATTCAAG+GGG + chr2_3:6258016-6258035 Msa0274430:intron 35.0%
! GTTTGGATTTGGAACAGTAA+GGG - chr2_3:6258064-6258083 None:intergenic 35.0%
TCCAAAACAACAATTCCTCT+GGG - chr2_3:6258352-6258371 None:intergenic 35.0%
TTCCAAAACAACAATTCCTC+TGG - chr2_3:6258353-6258372 None:intergenic 35.0%
AAGCTTACATTTCCTTCTCT+AGG + chr2_3:6258510-6258529 Msa0274430:intron 35.0%
TCACAAGTGCTTATGTAAGT+AGG - chr2_3:6258564-6258583 None:intergenic 35.0%
TATCACCTATAGACCTTGTT+TGG - chr2_3:6258803-6258822 None:intergenic 35.0%
ATGCTAAAATGGGTGATGAA+TGG + chr2_3:6258918-6258937 Msa0274430:intron 35.0%
ATTCATGAATCCTATGGATC+TGG + chr2_3:6259070-6259089 Msa0274430:three_prime_UTR 35.0%
AGGAAGACAACATTCTACTA+TGG + chr2_3:6259105-6259124 Msa0274430:three_prime_UTR 35.0%
GAAGGAAGCAAGAAACTTCA+AGG + chr2_3:6254773-6254792 Msa0274430:five_prime_UTR 40.0%
ATTTCAACTTTGCCAGCTCA+AGG + chr2_3:6255104-6255123 Msa0274430:CDS 40.0%
AAACTTTCATCACCTTGAGC+TGG - chr2_3:6255119-6255138 None:intergenic 40.0%
! ATAACTTGGTGAGCTGATAG+CGG + chr2_3:6255521-6255540 Msa0274430:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+TGG - chr2_3:6255610-6255629 None:intergenic 40.0%
TGTAGTGTCCCAATAGATCT+TGG + chr2_3:6255661-6255680 Msa0274430:intron 40.0%
! ACTTACAAAACTGGCCTGTA+AGG + chr2_3:6255731-6255750 Msa0274430:intron 40.0%
TGAAAGGTTTCTACACGTCA+TGG - chr2_3:6256071-6256090 None:intergenic 40.0%
ATTTGGAGGTCTAGAGAAGT+TGG + chr2_3:6256251-6256270 Msa0274430:intron 40.0%
GCTTCTCTCCATCTTCAAAT+TGG + chr2_3:6256299-6256318 Msa0274430:intron 40.0%
CTACGGCTAAATCATTGTCT+TGG + chr2_3:6256534-6256553 Msa0274430:intron 40.0%
CTCAGTTATGCTTCTGAGTT+AGG + chr2_3:6256610-6256629 Msa0274430:intron 40.0%
ACTAGTGGTCAATGCCAAAT+TGG - chr2_3:6256652-6256671 None:intergenic 40.0%
!! CCCTTTCTAAAAGTGTCTGA+TGG + chr2_3:6256823-6256842 Msa0274430:CDS 40.0%
!! GCCATCAGACACTTTTAGAA+AGG - chr2_3:6256827-6256846 None:intergenic 40.0%
! GTCTTTTCCCACAATTGTAC+AGG - chr2_3:6256866-6256885 None:intergenic 40.0%
! TGAGTCTAGCTCCTTTCTTA+AGG + chr2_3:6256924-6256943 Msa0274430:CDS 40.0%
! AATGAGGTTTTCCCTGCAAA+GGG + chr2_3:6257540-6257559 Msa0274430:CDS 40.0%
GACATCATCATCTCAAGCTA+AGG + chr2_3:6257581-6257600 Msa0274430:CDS 40.0%
ATCTCCAAAACCTGACGTTA+AGG + chr2_3:6257656-6257675 Msa0274430:CDS 40.0%
ATTGCTTGCAAAAACCTGTG+TGG + chr2_3:6257710-6257729 Msa0274430:CDS 40.0%
TATTTGCAGGAGTTGAGTCA+AGG - chr2_3:6257851-6257870 None:intergenic 40.0%
! GGTTTGGATTTGGAACAGTA+AGG - chr2_3:6258065-6258084 None:intergenic 40.0%
!! AGATAGAGCTGGTTTGGATT+TGG - chr2_3:6258075-6258094 None:intergenic 40.0%
! TTTTGCAGATAGAGCTGGTT+TGG - chr2_3:6258081-6258100 None:intergenic 40.0%
AACCAGCTCTATCTGCAAAA+TGG + chr2_3:6258081-6258100 Msa0274430:CDS 40.0%
! TACCATTTTGCAGATAGAGC+TGG - chr2_3:6258086-6258105 None:intergenic 40.0%
! TCTAATGTGATTGGTCAGAG+TGG + chr2_3:6258126-6258145 Msa0274430:CDS 40.0%
! AGTTCTTTTGCATCTAGCAG+TGG + chr2_3:6258153-6258172 Msa0274430:CDS 40.0%
TTCCGAATTCTTGTAGCTTC+AGG + chr2_3:6258277-6258296 Msa0274430:intron 40.0%
GACCTGAAGCTACAAGAATT+CGG - chr2_3:6258282-6258301 None:intergenic 40.0%
TCTTGTAGCTTCAGGTCATT+CGG + chr2_3:6258285-6258304 Msa0274430:intron 40.0%
!!! ACCCAGAGGAATTGTTGTTT+TGG + chr2_3:6258348-6258367 Msa0274430:CDS 40.0%
CTGAAGCAGAACGTTGTTAT+AGG + chr2_3:6258387-6258406 Msa0274430:CDS 40.0%
!! TATCATTGGCTTATGGAAGC+TGG + chr2_3:6258422-6258441 Msa0274430:CDS 40.0%
!! TACATTTCCTTCTCTAGGAC+TGG + chr2_3:6258515-6258534 Msa0274430:intron 40.0%
ACTTGTGAGACTGTTTGACA+GGG + chr2_3:6258576-6258595 Msa0274430:intron 40.0%
AGACTGTTTGACAGGGATTA+TGG + chr2_3:6258583-6258602 Msa0274430:intron 40.0%
!! TCTATTTTCAGGAGTTGTGG+AGG + chr2_3:6258951-6258970 Msa0274430:intron 40.0%
ATCTACAAACTACCAAGCAC+TGG - chr2_3:6258986-6259005 None:intergenic 40.0%
TGATAACAGTCCAGATCCAT+AGG - chr2_3:6259083-6259102 None:intergenic 40.0%
TAGATAAACCAGGGGGAAGA+AGG + chr2_3:6254751-6254770 Msa0274430:five_prime_UTR 45.0%
! AGAGTGAAGGGTTTTGCAAG+TGG - chr2_3:6254948-6254967 None:intergenic 45.0%
GAAGAGCGATTGAGAGTGAA+GGG - chr2_3:6254960-6254979 None:intergenic 45.0%
AGAAGAGCGATTGAGAGTGA+AGG - chr2_3:6254961-6254980 None:intergenic 45.0%
TCAGAATTGGAAGAGGGCTT+TGG - chr2_3:6254987-6255006 None:intergenic 45.0%
AAGCTCACGAGGACCTATAT+CGG + chr2_3:6255623-6255642 Msa0274430:intron 45.0%
TGGTGTAGTCTTCACCTTAC+AGG - chr2_3:6255748-6255767 None:intergenic 45.0%
ACACCACATCTCATCCAACA+TGG + chr2_3:6255785-6255804 Msa0274430:intron 45.0%
CACCACATCTCATCCAACAT+GGG + chr2_3:6255786-6255805 Msa0274430:intron 45.0%
TCGTGCAGAAGTAGAGGTAA+AGG - chr2_3:6255874-6255893 None:intergenic 45.0%
AACGTATCGTGCAGAAGTAG+AGG - chr2_3:6255880-6255899 None:intergenic 45.0%
! TGAAGATGGAGAGAAGCACA+GGG - chr2_3:6256296-6256315 None:intergenic 45.0%
! TTGAAGATGGAGAGAAGCAC+AGG - chr2_3:6256297-6256316 None:intergenic 45.0%
ACTGTATACAGTGACACGCA+TGG - chr2_3:6256450-6256469 None:intergenic 45.0%
! ATGCGTGTCACTGTATACAG+TGG + chr2_3:6256449-6256468 Msa0274430:intron 45.0%
CTGATGTGGATTCTCCTTGT+TGG + chr2_3:6257046-6257065 Msa0274430:CDS 45.0%
TGTGGATTCTCCTTGTTGGA+AGG + chr2_3:6257050-6257069 Msa0274430:CDS 45.0%
GTGGATTCTCCTTGTTGGAA+GGG + chr2_3:6257051-6257070 Msa0274430:CDS 45.0%
CCAATACCAGGAAAGAACTG+TGG - chr2_3:6257180-6257199 None:intergenic 45.0%
CCACAGTTCTTTCCTGGTAT+TGG + chr2_3:6257177-6257196 Msa0274430:CDS 45.0%
!! TGATCCAAGAAGCATCTCTG+TGG + chr2_3:6257380-6257399 Msa0274430:CDS 45.0%
! GAATGAGGTTTTCCCTGCAA+AGG + chr2_3:6257539-6257558 Msa0274430:CDS 45.0%
! GATGATGATGTCGGTGATGT+TGG - chr2_3:6257573-6257592 None:intergenic 45.0%
CCAACCATTACCTTAACGTC+AGG - chr2_3:6257669-6257688 None:intergenic 45.0%
! CCTGACGTTAAGGTAATGGT+TGG + chr2_3:6257666-6257685 Msa0274430:CDS 45.0%
CTTGCAAAAACCTGTGTGGA+CGG + chr2_3:6257714-6257733 Msa0274430:CDS 45.0%
ATGCAAAAGTAGGCGGTGAA+AGG + chr2_3:6257811-6257830 Msa0274430:CDS 45.0%
! TCTTTTGCATCTAGCAGTGG+AGG + chr2_3:6258156-6258175 Msa0274430:CDS 45.0%
ACCAAGAACGGCAATGAAGT+TGG + chr2_3:6258183-6258202 Msa0274430:CDS 45.0%
ACCAACTTCATTGCCGTTCT+TGG - chr2_3:6258187-6258206 None:intergenic 45.0%
! AAGTTGGTCAGGTACCCATA+TGG + chr2_3:6258199-6258218 Msa0274430:intron 45.0%
TTACTAGCACGCAGCCATAT+GGG - chr2_3:6258216-6258235 None:intergenic 45.0%
AGGTCATTCGGAGAAGTCTA+GGG + chr2_3:6258297-6258316 Msa0274430:CDS 45.0%
TGACAAACAAATGCACCCAG+AGG + chr2_3:6258334-6258353 Msa0274430:CDS 45.0%
!! TTTCCTTCTCTAGGACTGGT+TGG + chr2_3:6258519-6258538 Msa0274430:intron 45.0%
CACTTGTGAGACTGTTTGAC+AGG + chr2_3:6258575-6258594 Msa0274430:intron 45.0%
GGATCTGGACTGTTATCAAG+AGG + chr2_3:6259085-6259104 Msa0274430:three_prime_UTR 45.0%
!!! TATTCTAAATAAAATTTTAA+AGG - chr2_3:6256732-6256751 None:intergenic 5.0%
TAAACCAGGGGGAAGAAGGA+AGG + chr2_3:6254755-6254774 Msa0274430:five_prime_UTR 50.0%
CCTCGTGAGCTTAACTCAGT+TGG - chr2_3:6255615-6255634 None:intergenic 50.0%
CCAACTGAGTTAAGCTCACG+AGG + chr2_3:6255612-6255631 Msa0274430:intron 50.0%
GGGACACTACACCTACTATC+AGG - chr2_3:6255652-6255671 None:intergenic 50.0%
GTCCCATGTTGGATGAGATG+TGG - chr2_3:6255791-6255810 None:intergenic 50.0%
! GAAGATGGAGAGAAGCACAG+GGG - chr2_3:6256295-6256314 None:intergenic 50.0%
GGATTCAACACATCAACGGC+AGG - chr2_3:6256805-6256824 None:intergenic 50.0%
! GGGTGATAGTGACACTGATG+TGG + chr2_3:6257032-6257051 Msa0274430:CDS 50.0%
GGATCCACAGAGATGCTTCT+TGG - chr2_3:6257387-6257406 None:intergenic 50.0%
CTGAAAATCCCAGCGCTAGT+AGG + chr2_3:6257511-6257530 Msa0274430:CDS 50.0%
TTGGAGAACGACCCTTTGCA+GGG - chr2_3:6257554-6257573 None:intergenic 50.0%
TGAATCAACTCCGTCCACAC+AGG - chr2_3:6257727-6257746 None:intergenic 50.0%
GGCTGCTGCTGTGCATAAAT+TGG - chr2_3:6257937-6257956 None:intergenic 50.0%
GACATTCAAGGGGCTCGAAA+TGG + chr2_3:6258026-6258045 Msa0274430:intron 50.0%
TTTGCATCTAGCAGTGGAGG+TGG + chr2_3:6258159-6258178 Msa0274430:CDS 50.0%
! GAACGGCAATGAAGTTGGTC+AGG + chr2_3:6258188-6258207 Msa0274430:CDS 50.0%
GTTACTAGCACGCAGCCATA+TGG - chr2_3:6258217-6258236 None:intergenic 50.0%
CAGGTCATTCGGAGAAGTCT+AGG + chr2_3:6258296-6258315 Msa0274430:CDS 50.0%
TTGGCTTATGGAAGCTGGTG+TGG + chr2_3:6258427-6258446 Msa0274430:CDS 50.0%
CATCCAACCAGTCCTAGAGA+AGG - chr2_3:6258525-6258544 None:intergenic 50.0%
AGGTGACACTTACCAGTGCT+TGG + chr2_3:6258971-6258990 Msa0274430:exon 50.0%
! GAGAGAAGCACAGGGGCTTA+GGG - chr2_3:6256288-6256307 None:intergenic 55.0%
! TCCTTGTTGGAAGGGCACAC+CGG + chr2_3:6257059-6257078 Msa0274430:CDS 55.0%
GGAAAGAACTGTGGAGCTCG+AGG - chr2_3:6257171-6257190 None:intergenic 55.0%
CGAGCTCCACAGTTCTTTCC+TGG + chr2_3:6257171-6257190 Msa0274430:CDS 55.0%
TTCGCTGACCTACTAGCGCT+GGG - chr2_3:6257522-6257541 None:intergenic 55.0%
ATTCGCTGACCTACTAGCGC+TGG - chr2_3:6257523-6257542 None:intergenic 55.0%
CGCTAGTAGGTCAGCGAATG+AGG + chr2_3:6257524-6257543 Msa0274430:CDS 55.0%
GTTGGAGAACGACCCTTTGC+AGG - chr2_3:6257555-6257574 None:intergenic 55.0%
AGTGGAGGTGGCACCAAGAA+CGG + chr2_3:6258171-6258190 Msa0274430:CDS 55.0%
GCTTCCTTCCTTCTTCCCCC+TGG - chr2_3:6254762-6254781 None:intergenic 60.0%
! GGAGAGAAGCACAGGGGCTT+AGG - chr2_3:6256289-6256308 None:intergenic 60.0%
GCCGGTGTGCCCTTCCAACA+AGG - chr2_3:6257063-6257082 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 6254668 6259292 6254668 ID=Msa0274430;Name=Msa0274430
chr2_3 mRNA 6254668 6259292 6254668 ID=Msa0274430-mRNA-1;Parent=Msa0274430;Name=Msa0274430-mRNA-1;_AED=0.08;_eAED=0.08;_QI=247|1|1|1|1|1|5|316|608
chr2_3 exon 6254668 6255260 6254668 ID=Msa0274430-mRNA-1:exon:2902;Parent=Msa0274430-mRNA-1
chr2_3 exon 6256797 6257908 6256797 ID=Msa0274430-mRNA-1:exon:2903;Parent=Msa0274430-mRNA-1
chr2_3 exon 6258036 6258209 6258036 ID=Msa0274430-mRNA-1:exon:2904;Parent=Msa0274430-mRNA-1
chr2_3 exon 6258293 6258472 6258293 ID=Msa0274430-mRNA-1:exon:2905;Parent=Msa0274430-mRNA-1
chr2_3 exon 6258962 6259292 6258962 ID=Msa0274430-mRNA-1:exon:2906;Parent=Msa0274430-mRNA-1
chr2_3 five_prime_UTR 6254668 6254914 6254668 ID=Msa0274430-mRNA-1:five_prime_utr;Parent=Msa0274430-mRNA-1
chr2_3 CDS 6254915 6255260 6254915 ID=Msa0274430-mRNA-1:cds;Parent=Msa0274430-mRNA-1
chr2_3 CDS 6256797 6257908 6256797 ID=Msa0274430-mRNA-1:cds;Parent=Msa0274430-mRNA-1
chr2_3 CDS 6258036 6258209 6258036 ID=Msa0274430-mRNA-1:cds;Parent=Msa0274430-mRNA-1
chr2_3 CDS 6258293 6258472 6258293 ID=Msa0274430-mRNA-1:cds;Parent=Msa0274430-mRNA-1
chr2_3 CDS 6258962 6258976 6258962 ID=Msa0274430-mRNA-1:cds;Parent=Msa0274430-mRNA-1
chr2_3 three_prime_UTR 6258977 6259292 6258977 ID=Msa0274430-mRNA-1:three_prime_utr;Parent=Msa0274430-mRNA-1
Gene Sequence

>Msa0274430

ATGATGAATCAAAACACTTCTCGTTTGTCACCACTTGCAAAACCCTTCACTCTCAATCGCTCTTCTACACCAAAGCCCTCTTCCAATTCTGACAATCATGATGACCCTTTTAGTTCTTTGCTTGATTCTTTTCGACAAACTAGTTTCAGTTCAAAGGGTCGTTCTGTATTGTTGAATGACACTGTCAAAATTTCAACTTTGCCAGCTCAAGGTGATGAAAGTTTGCGTTTTGAAGAACACCCTTTTCTGGAATTGCATAAAAATGGTGACTTTGAAGTTGATGTGCTTAATTGGTCACACTTTGAAGTTGCTAATACAGCTAGTGATGTGAACATGTTTCAAAAAGATAAGCCTGCCGTTGATGTGTTGAATCCCTTTCTAAAAGTGTCTGATGGCATTTTTGAAAACAACACCTGTACAATTGTGGGAAAAGACATTCTATCGAATTCTGAAGGCACAAAACATGCTGTTGATGAGTCTAGCTCCTTTCTTAAGGCACAAAACAAGGTTGCCCCACTGAAGATATCAACTGATATGTCTTCTGCTAAAAGCACTCCTCAAAATCCGTTCTCTAATAATTTGGGTGATAGTGACACTGATGTGGATTCTCCTTGTTGGAAGGGCACACCGGCTCTAAGTTTAATTCCATCGGAAATTTCACAATCTGTACAATTTCATCATGTTGAGAAACCAACAGAAAAACATAATACTTTAAATCCTCGAGCTCCACAGTTCTTTCCTGGTATTGGATATGTTAAGGACGGTTTTGTCTCTTCGAACTCTAGCGCGCCTGTAACTACTAATTTGTTGTTGGGAGAGGACATACTCATGAAAACTGTCATGGAAGAATCTCTAGTAGATTTTAATATGGGAGAGTTTCAGTATTCAACCAACATCAACGGAATAGAAATGGCATTTAATATGATTAATGATCCAAGAAGCATCTCTGTGGATCCTCTGCTAAATTCACATTCTATGATGACTCAGTCTTCATCAATAGAAGCAACTTCAAAAGAAAAACTTGTAACTATAGGCGATGTTGATGACTTTGTAAAGGGAACTGAAAATCCCAGCGCTAGTAGGTCAGCGAATGAGGTTTTCCCTGCAAAGGGTCGTTCTCCAACATCACCGACATCATCATCTCAAGCTAAGGTTTTTACTGATCTTCTAAAAAGATTTGAAGGTTTCTCCAAGTCTTTAATTGAATCTCCAAAACCTGACGTTAAGGTAATGGTTGGCGCAATGCATGTTCTTTCAGAATTGCTTGCAAAAACCTGTGTGGACGGAGTTGATTCATATTGTGAACATGATCTTAGTAGGACTATGATCCTGCAAATAATCAATAATCTGAATGATTTTAATGCAAAAGTAGGCGGTGAAAGGACTTCAACTTCAATCCTTGACTCAACTCCTGCAAATAGTTCTTTTTATCTTGATAGATCATTAAAGGTTACCAAGGGGCTCGAAATGGAAAATGTAGAGACCCTTACTGTTCCAAATCCAAACCAGCTCTATCTGCAAAATGGTAATACTGGAAAAGCTATAGTTTCTAATGTGATTGGTCAGAGTGGACTGAGTTCTTTTGCATCTAGCAGTGGAGGTGGCACCAAGAACGGCAATGAAGTTGGTCAGCTTCAGGTCATTCGGAGAAGTCTAGGGAAAAATCTTGATTTTGACAAACAAATGCACCCAGAGGAATTGTTGTTTTGGAATTTATGGCTTGATTCTGAAGCAGAACGTTGTTATAGGAAATTTAAAACTTATCATTGGCTTATGGAAGCTGGTGTGGATGTAAATTGCAAAAATGTTGCGGAGTTGTGGAGGTGA
Protein sequence

>Msa0274430

MMNQNTSRLSPLAKPFTLNRSSTPKPSSNSDNHDDPFSSLLDSFRQTSFSSKGRSVLLNDTVKISTLPAQGDESLRFEEHPFLELHKNGDFEVDVLNWSHFEVANTASDVNMFQKDKPAVDVLNPFLKVSDGIFENNTCTIVGKDILSNSEGTKHAVDESSSFLKAQNKVAPLKISTDMSSAKSTPQNPFSNNLGDSDTDVDSPCWKGTPALSLIPSEISQSVQFHHVEKPTEKHNTLNPRAPQFFPGIGYVKDGFVSSNSSAPVTTNLLLGEDILMKTVMEESLVDFNMGEFQYSTNINGIEMAFNMINDPRSISVDPLLNSHSMMTQSSSIEATSKEKLVTIGDVDDFVKGTENPSASRSANEVFPAKGRSPTSPTSSSQAKVFTDLLKRFEGFSKSLIESPKPDVKVMVGAMHVLSELLAKTCVDGVDSYCEHDLSRTMILQIINNLNDFNAKVGGERTSTSILDSTPANSSFYLDRSLKVTKGLEMENVETLTVPNPNQLYLQNGNTGKAIVSNVIGQSGLSSFASSSGGGTKNGNEVGQLQVIRRSLGKNLDFDKQMHPEELLFWNLWLDSEAERCYRKFKTYHWLMEAGVDVNCKNVAELWR*