AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0314180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0314180 MtrunA17_Chr2g0284221 91.447 608 52 0 1 608 1 608 0.0 1072
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 124 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCCGTTCTCTAATAATT+TGG 0.097174 2_4:-9818760 Msa0314180:CDS
CTATTCATATCTGGATAATT+AGG 0.167640 2_4:-9816524 Msa0314180:three_prime_UTR
ACATATTATCAACTAATTAT+TGG 0.184086 2_4:-9816753 Msa0314180:three_prime_UTR
ACCAACTTCATTGCCGTTCT+TGG 0.193830 2_4:+9817587 None:intergenic
TTATCTTGATAGATCATTAA+AGG 0.205521 2_4:-9817893 Msa0314180:CDS
CTGAAGCAGAACGTTGTTAT+AGG 0.249987 2_4:-9817384 Msa0314180:CDS
CCACAGTTCTTTCCTGGTAT+TGG 0.271242 2_4:-9818594 Msa0314180:CDS
GAATCAAGCAAAGAACTAAA+AGG 0.274738 2_4:+9820748 None:intergenic
GTTGATCTTCTATTCATATC+TGG 0.283271 2_4:-9816533 Msa0314180:three_prime_UTR
TAAAACTTATCATTGGCTTA+TGG 0.286687 2_4:-9817356 Msa0314180:CDS
ACATCTTCAACAATTGTAAA+AGG 0.290927 2_4:-9820915 Msa0314180:five_prime_UTR
AGTAGTAAAGTACAATTATT+TGG 0.296272 2_4:-9821040 Msa0314180:five_prime_UTR
TTGAAGTTGATGTGCTTAAT+TGG 0.306162 2_4:-9820582 Msa0314180:CDS
TCAGATTATTGATTATTTGC+AGG 0.331084 2_4:+9817992 None:intergenic
AATCCGTTCTCTAATAATTT+GGG 0.332628 2_4:-9818759 Msa0314180:CDS
TATCTGCAAAATGGTAATAC+TGG 0.337162 2_4:-9817681 Msa0314180:CDS
CGAGCTCCACAGTTCTTTCC+TGG 0.337750 2_4:-9818600 Msa0314180:CDS
AGATAGAGCTGGTTTGGATT+TGG 0.341628 2_4:+9817699 None:intergenic
GTCATCATGATTGTCAGAAT+TGG 0.349089 2_4:+9820771 None:intergenic
ATTACCTTAACGTCAGGTTT+TGG 0.356212 2_4:+9818111 None:intergenic
AACCAGCTCTATCTGCAAAA+TGG 0.360107 2_4:-9817690 Msa0314180:CDS
GGATCCACAGAGATGCTTCT+TGG 0.363335 2_4:+9818387 None:intergenic
ACCCAGAGGAATTGTTGTTT+TGG 0.364863 2_4:-9817423 Msa0314180:CDS
TCCTGGTATTGGATATGTTA+AGG 0.376374 2_4:-9818583 Msa0314180:CDS
GTTGGAGAACGACCCTTTGC+AGG 0.376951 2_4:+9818219 None:intergenic
AACAACAAATTAGTAGTTAC+AGG 0.378198 2_4:+9818531 None:intergenic
GGAAATTTAAAACTTATCAT+TGG 0.389447 2_4:-9817363 Msa0314180:CDS
GCTATAGTTTCTAATGTGAT+TGG 0.393230 2_4:-9817654 Msa0314180:CDS
TTCCAAAACAACAATTCCTC+TGG 0.407386 2_4:+9817421 None:intergenic
CTGATGTGGATTCTCCTTGT+TGG 0.416929 2_4:-9818725 Msa0314180:CDS
TCAGAATTGGAAGAGGGCTT+TGG 0.418484 2_4:+9820784 None:intergenic
GTAACTACTAATTTGTTGTT+GGG 0.420493 2_4:-9818528 Msa0314180:CDS
GATGTTGATGACTTTGTAAA+GGG 0.423416 2_4:-9818285 Msa0314180:CDS
TGTAACTACTAATTTGTTGT+TGG 0.428051 2_4:-9818529 Msa0314180:CDS
TCTTGTAGCTTCAGGTCATT+CGG 0.429260 2_4:-9817486 Msa0314180:intron
GACATTCAAGGGGCTCGAAA+TGG 0.429304 2_4:-9817745 Msa0314180:intron
CGCTAGTAGGTCAGCGAATG+AGG 0.432078 2_4:-9818247 Msa0314180:CDS
CAACATCAACGGAATAGAAA+TGG 0.444445 2_4:-9818430 Msa0314180:CDS
CAGGTCATTCGGAGAAGTCT+AGG 0.444572 2_4:-9817475 Msa0314180:CDS
ATTCATGAATCCTATGGATC+TGG 0.444654 2_4:-9816701 Msa0314180:three_prime_UTR
ACAAACTAGTTTCAGTTCAA+AGG 0.446234 2_4:-9820719 Msa0314180:CDS
CTGAAAATCCCAGCGCTAGT+AGG 0.447730 2_4:-9818260 Msa0314180:CDS
TGAGTCTAGCTCCTTTCTTA+AGG 0.447790 2_4:-9818847 Msa0314180:CDS
TACTAATTTGTTGTTGGGAG+AGG 0.458062 2_4:-9818523 Msa0314180:CDS
ATCTCCAAAACCTGACGTTA+AGG 0.461121 2_4:-9818115 Msa0314180:CDS
TCCTTGTTGGAAGGGAACAC+CGG 0.463719 2_4:-9818712 Msa0314180:CDS
GAAGAAGAAAATTAGTTAAG+TGG 0.473997 2_4:+9816641 None:intergenic
GTATTGACTTGGAAGATGTT+TGG 0.476389 2_4:-9820973 Msa0314180:five_prime_UTR
GAAGAGCGATTGAGAGTGAA+GGG 0.476653 2_4:+9820811 None:intergenic
ATTCGCTGACCTACTAGCGC+TGG 0.479453 2_4:+9818251 None:intergenic
TTTGCATCTAGCAGTGGAGG+TGG 0.480201 2_4:-9817612 Msa0314180:CDS
AACAACACCTGTACAATTGT+GGG 0.481405 2_4:-9818915 Msa0314180:CDS
CCAACCATTACCTTAACGTC+AGG 0.484558 2_4:+9818105 None:intergenic
GATGTGAACATGTTTCAAAA+AGG 0.485335 2_4:-9820529 Msa0314180:intron
GAAGGAAGCAAGAAACTTCA+AGG 0.488132 2_4:-9820995 Msa0314180:five_prime_UTR
GATGATGATGTCGGTGATGT+TGG 0.491166 2_4:+9818201 None:intergenic
GGCTCTAAGTTTAATTCCAT+CGG 0.493635 2_4:-9818691 Msa0314180:CDS
GAACGGCAATGAAGTTGGTC+AGG 0.493848 2_4:-9817583 Msa0314180:intron
AATCAAGCAAAGAACTAAAA+GGG 0.493888 2_4:+9820749 None:intergenic
CGATGTTGATGACTTTGTAA+AGG 0.495336 2_4:-9818286 Msa0314180:CDS
AGGAAGACAACATTCTACTA+TGG 0.497073 2_4:-9816666 Msa0314180:three_prime_UTR
AAAACCTGACGTTAAGGTAA+TGG 0.497832 2_4:-9818109 Msa0314180:CDS
CTTTCTTAAGGCACAAAACA+AGG 0.498676 2_4:-9818835 Msa0314180:CDS
CAAACTAGTTTCAGTTCAAA+GGG 0.503600 2_4:-9820718 Msa0314180:CDS
TGGAGATTCAATTAAAGACT+TGG 0.504370 2_4:+9818131 None:intergenic
AAACAACACCTGTACAATTG+TGG 0.510308 2_4:-9818916 Msa0314180:CDS
TATCATTGGCTTATGGAAGC+TGG 0.511955 2_4:-9817349 Msa0314180:CDS
ACCAAGAACGGCAATGAAGT+TGG 0.514005 2_4:-9817588 Msa0314180:CDS
ATTTCAACTTTGCCAGCTCA+AGG 0.519701 2_4:-9820664 Msa0314180:CDS
ATTGTGAACATGATCTTAGT+AGG 0.520511 2_4:-9818023 Msa0314180:CDS
GGTTTGGATTTGGAACAGTA+AGG 0.524431 2_4:+9817709 None:intergenic
TAACTGATTCATGAATCCTA+TGG 0.531363 2_4:-9816707 Msa0314180:three_prime_UTR
ATGCAAAAGTAGGCGGTGAA+AGG 0.532881 2_4:-9817960 Msa0314180:CDS
AGAAGAGCGATTGAGAGTGA+AGG 0.533447 2_4:+9820810 None:intergenic
AGTGGAGGTGGCACCAAGAA+CGG 0.535431 2_4:-9817600 Msa0314180:CDS
AAACTTTCATCACCTTGAGC+TGG 0.539485 2_4:+9820652 None:intergenic
TTCGCTGACCTACTAGCGCT+GGG 0.542567 2_4:+9818252 None:intergenic
AAGAAGAAAATTAGTTAAGT+GGG 0.542898 2_4:+9816642 None:intergenic
CATTTCTATTCCGTTGATGT+TGG 0.543726 2_4:+9818431 None:intergenic
TGATAACAGTCCAGATCCAT+AGG 0.548372 2_4:+9816691 None:intergenic
GTTTGGATTTGGAACAGTAA+GGG 0.554673 2_4:+9817710 None:intergenic
ATCTACAAACTACTAAGCAC+TGG 0.555531 2_4:+9816788 None:intergenic
TGTGGATTCTCCTTGTTGGA+AGG 0.556271 2_4:-9818721 Msa0314180:CDS
GAAACTTCAAGGTATTGACT+TGG 0.557829 2_4:-9820984 Msa0314180:five_prime_UTR
AGGTCATTCGGAGAAGTCTA+GGG 0.562459 2_4:-9817474 Msa0314180:CDS
ACAGATTGTGAAATTTCCGA+TGG 0.569930 2_4:+9818675 None:intergenic
GACATCATCATCTCAAGCTA+AGG 0.572158 2_4:-9818190 Msa0314180:CDS
GGTATTGGATATGTTAAGGA+CGG 0.572974 2_4:-9818579 Msa0314180:CDS
TCCAAAACAACAATTCCTCT+GGG 0.577956 2_4:+9817422 None:intergenic
TATTTGCAGGAGTTGAGTCA+AGG 0.580540 2_4:+9817923 None:intergenic
GATGGAATTAAACTTAGAGC+CGG 0.581730 2_4:+9818693 None:intergenic
ATTATTTGGTAGATAAACCA+GGG 0.582760 2_4:-9821026 Msa0314180:five_prime_UTR
ATGATTGTCAGAATTGGAAG+AGG 0.584015 2_4:+9820777 None:intergenic
TTGGCTTATGGAAGCTGGTG+TGG 0.584648 2_4:-9817344 Msa0314180:CDS
TTGGAGAACGACCCTTTGCA+GGG 0.585408 2_4:+9818220 None:intergenic
CCCTTTCTAAAAGTGTCTGA+TGG 0.588863 2_4:-9818948 Msa0314180:CDS
AATTATTTGGTAGATAAACC+AGG 0.589090 2_4:-9821027 Msa0314180:five_prime_UTR
GTGGATTCTCCTTGTTGGAA+GGG 0.590196 2_4:-9818720 Msa0314180:CDS
CAGTATTCAACCAACATCAA+CGG 0.591588 2_4:-9818441 Msa0314180:CDS
TATCAGTTGATATCTTCAGT+GGG 0.593193 2_4:+9818808 None:intergenic
TCACCCAAATTATTAGAGAA+CGG 0.595772 2_4:+9818756 None:intergenic
GGATTCAACACATCAACGGC+AGG 0.596335 2_4:+9818969 None:intergenic
CATACTCATGAAAACTGTCA+TGG 0.606687 2_4:-9818499 Msa0314180:CDS
CCTGACGTTAAGGTAATGGT+TGG 0.609803 2_4:-9818105 Msa0314180:CDS
GACATTCTATCGAATTCCGA+AGG 0.618978 2_4:-9818888 Msa0314180:CDS
GGAAAGAACTGTGGAGCTCG+AGG 0.619071 2_4:+9818603 None:intergenic
TGATTGTCAGAATTGGAAGA+GGG 0.619486 2_4:+9820778 None:intergenic
GCCGGTGTTCCCTTCCAACA+AGG 0.621250 2_4:+9818711 None:intergenic
GGATCTGGACTGTTATCAAG+AGG 0.622838 2_4:-9816686 Msa0314180:three_prime_UTR
TCCTTAACATATCCAATACC+AGG 0.627311 2_4:+9818582 None:intergenic
TAGATCATTAAAGGTTACCA+AGG 0.638742 2_4:-9817884 Msa0314180:intron
GGGTGATAGTGACACTGATG+TGG 0.639954 2_4:-9818739 Msa0314180:CDS
ATATCAGTTGATATCTTCAG+TGG 0.649663 2_4:+9818807 None:intergenic
ATAGAATGTGAATTTAGCAG+AGG 0.659245 2_4:+9818366 None:intergenic
TGAATCAACTCCGTCCACAC+AGG 0.663059 2_4:+9818047 None:intergenic
AAAGGGATTCAACACATCAA+CGG 0.665270 2_4:+9818965 None:intergenic
CCAATACCAGGAAAGAACTG+TGG 0.670251 2_4:+9818594 None:intergenic
TCTAATGTGATTGGTCAGAG+TGG 0.670664 2_4:-9817645 Msa0314180:CDS
TGATCCAAGAAGCATCTCTG+TGG 0.683600 2_4:-9818391 Msa0314180:CDS
TGACAAACAAATGCACCCAG+AGG 0.683639 2_4:-9817437 Msa0314180:CDS
ATCAGTTGATATCTTCAGTG+GGG 0.704864 2_4:+9818809 None:intergenic
TTATTTGGTAGATAAACCAG+GGG 0.721542 2_4:-9821025 Msa0314180:five_prime_UTR
TTAGCTTGAGATGATGATGT+CGG 0.724297 2_4:+9818192 None:intergenic
TATTTGGTAGATAAACCAGG+GGG 0.782772 2_4:-9821024 Msa0314180:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGTTTTTTAATTAAACAA+AGG + chr2_4:9816504-9816523 None:intergenic 10.0%
!!! TTTTCATAAAAAAATTTATC+TGG - chr2_4:9817325-9817344 Msa0314180:CDS 10.0%
!!! GAGAAGTTTATATATTTTTT+TGG - chr2_4:9817229-9817248 Msa0314180:intron 15.0%
!! TTATCTGCAAATATAAAATT+TGG - chr2_4:9818064-9818083 Msa0314180:CDS 15.0%
!! TTAAAAATAGTTTCAAGAAT+AGG + chr2_4:9818245-9818264 None:intergenic 15.0%
!! ACATATTATCAACTAATTAT+TGG - chr2_4:9820848-9820867 Msa0314180:CDS 15.0%
!! AGTAGTAAAGTACAATTATT+TGG - chr2_4:9816561-9816580 Msa0314180:three_prime_UTR 20.0%
!!! TCATATCTTTGTTTTTTGTT+TGG + chr2_4:9816732-9816751 None:intergenic 20.0%
!!! TTTAAAAAATGTCTAAAGCA+AGG + chr2_4:9817165-9817184 None:intergenic 20.0%
!!! TTGCTTTAGACATTTTTTAA+AGG - chr2_4:9817164-9817183 Msa0314180:intron 20.0%
!!! TGCTTTAGACATTTTTTAAA+GGG - chr2_4:9817165-9817184 Msa0314180:intron 20.0%
!! TATTATATATCATCATAAGC+TGG - chr2_4:9817797-9817816 Msa0314180:intron 20.0%
!!! AATATTGATATTTGAAGTGA+TGG - chr2_4:9818330-9818349 Msa0314180:CDS 20.0%
!! TTTAACTAAAAAAACACTAG+TGG + chr2_4:9818497-9818516 None:intergenic 20.0%
!!! AAAGTATTATGTTTTTCTGT+TGG + chr2_4:9818974-9818993 None:intergenic 20.0%
!!! ATCTCTAGTAGATTTTAATA+TGG - chr2_4:9819129-9819148 Msa0314180:intron 20.0%
!!! TCTCTAGTAGATTTTAATAT+GGG - chr2_4:9819130-9819149 Msa0314180:intron 20.0%
!! AAAGAAAAACTTGTAACTAT+AGG - chr2_4:9819292-9819311 Msa0314180:intron 20.0%
!!! AATGATTTTAATGCAAAAGT+AGG - chr2_4:9819631-9819650 Msa0314180:intron 20.0%
!! TTATCTTGATAGATCATTAA+AGG - chr2_4:9819708-9819727 Msa0314180:intron 20.0%
!!! AATTGTTGTTTTGGAATTTA+TGG - chr2_4:9820187-9820206 Msa0314180:intron 20.0%
!!! GGAAATTTAAAACTTATCAT+TGG - chr2_4:9820238-9820257 Msa0314180:intron 20.0%
!! AAGAAGAAAATTAGTTAAGT+GGG + chr2_4:9820962-9820981 None:intergenic 20.0%
! AATTATTTGGTAGATAAACC+AGG - chr2_4:9816574-9816593 Msa0314180:three_prime_UTR 25.0%
! ATTATTTGGTAGATAAACCA+GGG - chr2_4:9816575-9816594 Msa0314180:three_prime_UTR 25.0%
!!! TGTTTTGATGAAAGGAAAAT+TGG + chr2_4:9816669-9816688 None:intergenic 25.0%
! ACATCTTCAACAATTGTAAA+AGG - chr2_4:9816686-9816705 Msa0314180:three_prime_UTR 25.0%
! AATCAAGCAAAGAACTAAAA+GGG + chr2_4:9816855-9816874 None:intergenic 25.0%
!! TTTTATGCAATTCCAGAAAA+GGG + chr2_4:9816990-9817009 None:intergenic 25.0%
!! TTTTTATGCAATTCCAGAAA+AGG + chr2_4:9816991-9817010 None:intergenic 25.0%
!!! TTTCTGGAATTGCATAAAAA+TGG - chr2_4:9816991-9817010 Msa0314180:intron 25.0%
! TAATACCATCTTAGAATTCA+AGG - chr2_4:9817522-9817541 Msa0314180:intron 25.0%
!!! GTTTTGTAAGTTTGAGTTTA+GGG + chr2_4:9817552-9817571 None:intergenic 25.0%
!!! AGTTTTGTAAGTTTGAGTTT+AGG + chr2_4:9817553-9817572 None:intergenic 25.0%
! TAAACTCAAACTTACAAAAC+TGG - chr2_4:9817552-9817571 Msa0314180:intron 25.0%
! ATGCTCTACAGAAATTATTT+AGG - chr2_4:9818003-9818022 Msa0314180:CDS 25.0%
!! TAGTTGACTTTGATTTCTAA+AGG + chr2_4:9818037-9818056 None:intergenic 25.0%
! TCTGCAAATATAAAATTTGG+AGG - chr2_4:9818067-9818086 Msa0314180:CDS 25.0%
!!! GAGTCATTTTATTTCTATCT+TGG + chr2_4:9818211-9818230 None:intergenic 25.0%
! AAATCCGTTCTCTAATAATT+TGG - chr2_4:9818841-9818860 Msa0314180:CDS 25.0%
! AATCCGTTCTCTAATAATTT+GGG - chr2_4:9818842-9818861 Msa0314180:CDS 25.0%
! AACAACAAATTAGTAGTTAC+AGG + chr2_4:9819073-9819092 None:intergenic 25.0%
!!! TGTAACTACTAATTTGTTGT+TGG - chr2_4:9819072-9819091 Msa0314180:intron 25.0%
!!! GTAACTACTAATTTGTTGTT+GGG - chr2_4:9819073-9819092 Msa0314180:intron 25.0%
!! GATCTTCTAAAAAGATTTGA+AGG - chr2_4:9819442-9819461 Msa0314180:intron 25.0%
!! TCAGATTATTGATTATTTGC+AGG + chr2_4:9819612-9819631 None:intergenic 25.0%
! AGATAAAAAGAACTATTTGC+AGG + chr2_4:9819694-9819713 None:intergenic 25.0%
! AATATAGATCATACATACCT+TGG + chr2_4:9819737-9819756 None:intergenic 25.0%
! AAAACAAACAGATTTGATTC+TGG + chr2_4:9820069-9820088 None:intergenic 25.0%
!!! TAAAACTTATCATTGGCTTA+TGG - chr2_4:9820245-9820264 Msa0314180:intron 25.0%
! TGTAAATTGCAAAAATGTTG+CGG - chr2_4:9820281-9820300 Msa0314180:intron 25.0%
!!! CTACTTGCTATAGTATTTTT+AGG + chr2_4:9820319-9820338 None:intergenic 25.0%
!! ATTATTTCCATAAGCTCTTT+TGG - chr2_4:9820471-9820490 Msa0314180:intron 25.0%
! TATATTATGCATGCTAACAT+GGG - chr2_4:9820738-9820757 Msa0314180:CDS 25.0%
!!! GATTGTGTATTTCTATTTTC+AGG - chr2_4:9820770-9820789 Msa0314180:CDS 25.0%
! GAAGAAGAAAATTAGTTAAG+TGG + chr2_4:9820963-9820982 None:intergenic 25.0%
!! CTTAACTAATTTTCTTCTTC+TGG - chr2_4:9820963-9820982 Msa0314180:five_prime_UTR 25.0%
! CTATTCATATCTGGATAATT+AGG - chr2_4:9821077-9821096 Msa0314180:five_prime_UTR 25.0%
TTATTTGGTAGATAAACCAG+GGG - chr2_4:9816576-9816595 Msa0314180:three_prime_UTR 30.0%
!!! GTTGAAGATGTTTTGATGAA+AGG + chr2_4:9816677-9816696 None:intergenic 30.0%
GAATCAAGCAAAGAACTAAA+AGG + chr2_4:9816856-9816875 None:intergenic 30.0%
! ACAAACTAGTTTCAGTTCAA+AGG - chr2_4:9816882-9816901 Msa0314180:intron 30.0%
! CAAACTAGTTTCAGTTCAAA+GGG - chr2_4:9816883-9816902 Msa0314180:intron 30.0%
!! TTGAAGTTGATGTGCTTAAT+TGG - chr2_4:9817019-9817038 Msa0314180:intron 30.0%
GATGTGAACATGTTTCAAAA+AGG - chr2_4:9817072-9817091 Msa0314180:intron 30.0%
AGCTATTCTTTCATTGTTAG+AGG + chr2_4:9817289-9817308 None:intergenic 30.0%
! AATTTATCTGGAGCATAACT+TGG - chr2_4:9817337-9817356 Msa0314180:CDS 30.0%
!!! GAAACCTTTTTTTTTTGTGG+TGG - chr2_4:9817373-9817392 Msa0314180:CDS 30.0%
!!! TTTTTTTTTTGTGGTGGCTA+GGG - chr2_4:9817379-9817398 Msa0314180:CDS 30.0%
CATAAAATATGCAAGGTTTG+GGG + chr2_4:9817411-9817430 None:intergenic 30.0%
GCATAAAATATGCAAGGTTT+GGG + chr2_4:9817412-9817431 None:intergenic 30.0%
TGCATAAAATATGCAAGGTT+TGG + chr2_4:9817413-9817432 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG + chr2_4:9817418-9817437 None:intergenic 30.0%
TGTGACAATGTGTTTATAAG+TGG + chr2_4:9817598-9817617 None:intergenic 30.0%
TCTTAGTTTCCCTATTACAT+TGG - chr2_4:9817851-9817870 Msa0314180:intron 30.0%
AGTGAGATTCCAATGTAATA+GGG + chr2_4:9817863-9817882 None:intergenic 30.0%
TAGTGAGATTCCAATGTAAT+AGG + chr2_4:9817864-9817883 None:intergenic 30.0%
! GCATGAATTTTATTGCTGAA+AGG + chr2_4:9817917-9817936 None:intergenic 30.0%
CTAAGAGTGAAGAATTACAA+AGG - chr2_4:9817968-9817987 Msa0314180:CDS 30.0%
TCAACTAACCAATTTGAAGA+TGG + chr2_4:9818140-9818159 None:intergenic 30.0%
!!! TGATGGAAATGTTTTAGCTA+CGG - chr2_4:9818347-9818366 Msa0314180:CDS 30.0%
! TATCAGTTGATATCTTCAGT+GGG + chr2_4:9818796-9818815 None:intergenic 30.0%
! ATATCAGTTGATATCTTCAG+TGG + chr2_4:9818797-9818816 None:intergenic 30.0%
!! TTATTAGAGAACGGATTTTG+AGG + chr2_4:9818839-9818858 None:intergenic 30.0%
TCACCCAAATTATTAGAGAA+CGG + chr2_4:9818848-9818867 None:intergenic 30.0%
ATAGAATGTGAATTTAGCAG+AGG + chr2_4:9819238-9819257 None:intergenic 30.0%
!! GATGTTGATGACTTTGTAAA+GGG - chr2_4:9819316-9819335 Msa0314180:intron 30.0%
TGGAGATTCAATTAAAGACT+TGG + chr2_4:9819473-9819492 None:intergenic 30.0%
ATTGTGAACATGATCTTAGT+AGG - chr2_4:9819578-9819597 Msa0314180:intron 30.0%
!! GATTTTAATGCAAAAGTAGG+CGG - chr2_4:9819634-9819653 Msa0314180:intron 30.0%
TAGATCATTAAAGGTTACCA+AGG - chr2_4:9819717-9819736 Msa0314180:intron 30.0%
GAGCAGAGAATGAAATAAAA+GGG + chr2_4:9819798-9819817 None:intergenic 30.0%
TGAGCAGAGAATGAAATAAA+AGG + chr2_4:9819799-9819818 None:intergenic 30.0%
TATCTGCAAAATGGTAATAC+TGG - chr2_4:9819920-9819939 Msa0314180:intron 30.0%
GCTATAGTTTCTAATGTGAT+TGG - chr2_4:9819947-9819966 Msa0314180:intron 30.0%
TATGGAAACAACTTATGACA+TGG - chr2_4:9820431-9820450 Msa0314180:intron 30.0%
AAGTTATCCAAAAGAGCTTA+TGG + chr2_4:9820481-9820500 None:intergenic 30.0%
TTAAGCTGTATATCCAAACA+AGG - chr2_4:9820617-9820636 Msa0314180:CDS 30.0%
TATATCCAAACAAGGTCTAT+AGG - chr2_4:9820625-9820644 Msa0314180:CDS 30.0%
CTATATTATGCATGCTAACA+TGG - chr2_4:9820737-9820756 Msa0314180:CDS 30.0%
!! ATTTCTATTTTCAGGAGTTG+TGG - chr2_4:9820778-9820797 Msa0314180:CDS 30.0%
! TAACTGATTCATGAATCCTA+TGG - chr2_4:9820894-9820913 Msa0314180:five_prime_UTR 30.0%
GTTGATCTTCTATTCATATC+TGG - chr2_4:9821068-9821087 Msa0314180:five_prime_UTR 30.0%
TATTTGGTAGATAAACCAGG+GGG - chr2_4:9816577-9816596 Msa0314180:three_prime_UTR 35.0%
!! GAAACTTCAAGGTATTGACT+TGG - chr2_4:9816617-9816636 Msa0314180:three_prime_UTR 35.0%
!! GTATTGACTTGGAAGATGTT+TGG - chr2_4:9816628-9816647 Msa0314180:three_prime_UTR 35.0%
TGATTGTCAGAATTGGAAGA+GGG + chr2_4:9816826-9816845 None:intergenic 35.0%
ATGATTGTCAGAATTGGAAG+AGG + chr2_4:9816827-9816846 None:intergenic 35.0%
GTCATCATGATTGTCAGAAT+TGG + chr2_4:9816833-9816852 None:intergenic 35.0%
!! TTTTGAAGAACACCCTTTTC+TGG - chr2_4:9816975-9816994 Msa0314180:intron 35.0%
CATTGTTAGAGGAACGATTA+AGG + chr2_4:9817278-9817297 None:intergenic 35.0%
!!! GCGGAAACCTTTTTTTTTTG+TGG - chr2_4:9817370-9817389 Msa0314180:CDS 35.0%
CTAGCCACCACAAAAAAAAA+AGG + chr2_4:9817380-9817399 None:intergenic 35.0%
!!! CTTTTTTTTTTGTGGTGGCT+AGG - chr2_4:9817378-9817397 Msa0314180:CDS 35.0%
TACTATCAGGTTTCCGATAT+AGG + chr2_4:9817469-9817488 None:intergenic 35.0%
TATATCGGAAACCTGATAGT+AGG - chr2_4:9817468-9817487 Msa0314180:CDS 35.0%
GAGCTTATCCAAGATCTATT+GGG + chr2_4:9817502-9817521 None:intergenic 35.0%
AGAGCTTATCCAAGATCTAT+TGG + chr2_4:9817503-9817522 None:intergenic 35.0%
! GACAACCTTGAATTCTAAGA+TGG + chr2_4:9817530-9817549 None:intergenic 35.0%
!! TACTTTTAAGAGTCCCATGT+TGG + chr2_4:9817632-9817651 None:intergenic 35.0%
GTAATTCTTCACTCTTAGAG+AGG + chr2_4:9817966-9817985 None:intergenic 35.0%
CACTGTATACAGTGGTAAAT+TGG - chr2_4:9818287-9818306 Msa0314180:CDS 35.0%
TCAGTTATGCTTCTGAGTTA+GGG - chr2_4:9818441-9818460 Msa0314180:CDS 35.0%
ATCAAAATCTTGCGCCAATT+TGG - chr2_4:9818465-9818484 Msa0314180:CDS 35.0%
GACAAATAGATGAGAAACTG+TGG - chr2_4:9818590-9818609 Msa0314180:CDS 35.0%
AAAGGGATTCAACACATCAA+CGG + chr2_4:9818639-9818658 None:intergenic 35.0%
!! CCATCAGACACTTTTAGAAA+GGG + chr2_4:9818656-9818675 None:intergenic 35.0%
AAACAACACCTGTACAATTG+TGG - chr2_4:9818685-9818704 Msa0314180:CDS 35.0%
AACAACACCTGTACAATTGT+GGG - chr2_4:9818686-9818705 Msa0314180:CDS 35.0%
!!! CTTGTTTTGTGCCTTAAGAA+AGG + chr2_4:9818768-9818787 None:intergenic 35.0%
CTTTCTTAAGGCACAAAACA+AGG - chr2_4:9818766-9818785 Msa0314180:CDS 35.0%
! ATCAGTTGATATCTTCAGTG+GGG + chr2_4:9818795-9818814 None:intergenic 35.0%
GATGGAATTAAACTTAGAGC+CGG + chr2_4:9818911-9818930 None:intergenic 35.0%
!! GGCTCTAAGTTTAATTCCAT+CGG - chr2_4:9818910-9818929 Msa0314180:CDS 35.0%
ACAGATTGTGAAATTTCCGA+TGG + chr2_4:9818929-9818948 None:intergenic 35.0%
! TCCTGGTATTGGATATGTTA+AGG - chr2_4:9819018-9819037 Msa0314180:intron 35.0%
TCCTTAACATATCCAATACC+AGG + chr2_4:9819022-9819041 None:intergenic 35.0%
! GGTATTGGATATGTTAAGGA+CGG - chr2_4:9819022-9819041 Msa0314180:intron 35.0%
!! TACTAATTTGTTGTTGGGAG+AGG - chr2_4:9819078-9819097 Msa0314180:intron 35.0%
CATACTCATGAAAACTGTCA+TGG - chr2_4:9819102-9819121 Msa0314180:intron 35.0%
CAGTATTCAACCAACATCAA+CGG - chr2_4:9819160-9819179 Msa0314180:intron 35.0%
CATTTCTATTCCGTTGATGT+TGG + chr2_4:9819173-9819192 None:intergenic 35.0%
CAACATCAACGGAATAGAAA+TGG - chr2_4:9819171-9819190 Msa0314180:intron 35.0%
!! CGATGTTGATGACTTTGTAA+AGG - chr2_4:9819315-9819334 Msa0314180:intron 35.0%
! TTAGCTTGAGATGATGATGT+CGG + chr2_4:9819412-9819431 None:intergenic 35.0%
! ATTACCTTAACGTCAGGTTT+TGG + chr2_4:9819493-9819512 None:intergenic 35.0%
AAAACCTGACGTTAAGGTAA+TGG - chr2_4:9819492-9819511 Msa0314180:intron 35.0%
!! TGAAATAAAAGGGCACTGTT+AGG + chr2_4:9819788-9819807 None:intergenic 35.0%
TGCATATATGTCGACATTCA+AGG - chr2_4:9819844-9819863 Msa0314180:intron 35.0%
GCATATATGTCGACATTCAA+GGG - chr2_4:9819845-9819864 Msa0314180:intron 35.0%
CATATATGTCGACATTCAAG+GGG - chr2_4:9819846-9819865 Msa0314180:intron 35.0%
! GTTTGGATTTGGAACAGTAA+GGG + chr2_4:9819894-9819913 None:intergenic 35.0%
TCCAAAACAACAATTCCTCT+GGG + chr2_4:9820182-9820201 None:intergenic 35.0%
TTCCAAAACAACAATTCCTC+TGG + chr2_4:9820183-9820202 None:intergenic 35.0%
AAGCTTACATTTCCTTCTCT+AGG - chr2_4:9820340-9820359 Msa0314180:intron 35.0%
TCACAAGTGCTTATGTAAGT+AGG + chr2_4:9820394-9820413 None:intergenic 35.0%
TATCACCTATAGACCTTGTT+TGG + chr2_4:9820633-9820652 None:intergenic 35.0%
ATCTACAAACTACTAAGCAC+TGG + chr2_4:9820816-9820835 None:intergenic 35.0%
ATTCATGAATCCTATGGATC+TGG - chr2_4:9820900-9820919 Msa0314180:five_prime_UTR 35.0%
AGGAAGACAACATTCTACTA+TGG - chr2_4:9820935-9820954 Msa0314180:five_prime_UTR 35.0%
GAAGGAAGCAAGAAACTTCA+AGG - chr2_4:9816606-9816625 Msa0314180:three_prime_UTR 40.0%
ATTTCAACTTTGCCAGCTCA+AGG - chr2_4:9816937-9816956 Msa0314180:intron 40.0%
AAACTTTCATCACCTTGAGC+TGG + chr2_4:9816952-9816971 None:intergenic 40.0%
! ATAACTTGGTGAGCTGATAG+CGG - chr2_4:9817351-9817370 Msa0314180:CDS 40.0%
! TGAGCTTAACTCAGTTGGTA+TGG + chr2_4:9817440-9817459 None:intergenic 40.0%
TGTAGTGTCCCAATAGATCT+TGG - chr2_4:9817491-9817510 Msa0314180:intron 40.0%
! ACTTACAAAACTGGCCTGTA+AGG - chr2_4:9817561-9817580 Msa0314180:intron 40.0%
TGAAAGGTTTCTACACGTCA+TGG + chr2_4:9817901-9817920 None:intergenic 40.0%
ATTTGGAGGTCTAGAGAAGT+TGG - chr2_4:9818081-9818100 Msa0314180:CDS 40.0%
GCTTCTCTCCATCTTCAAAT+TGG - chr2_4:9818129-9818148 Msa0314180:CDS 40.0%
CTACGGCTAAATCATTGTCT+TGG - chr2_4:9818364-9818383 Msa0314180:CDS 40.0%
CTCAGTTATGCTTCTGAGTT+AGG - chr2_4:9818440-9818459 Msa0314180:CDS 40.0%
ACTAGTGGTCAATGCCAAAT+TGG + chr2_4:9818482-9818501 None:intergenic 40.0%
!! CCCTTTCTAAAAGTGTCTGA+TGG - chr2_4:9818653-9818672 Msa0314180:CDS 40.0%
!! GCCATCAGACACTTTTAGAA+AGG + chr2_4:9818657-9818676 None:intergenic 40.0%
! GTCTTTTCCCACAATTGTAC+AGG + chr2_4:9818696-9818715 None:intergenic 40.0%
GACATTCTATCGAATTCCGA+AGG - chr2_4:9818713-9818732 Msa0314180:CDS 40.0%
! AACAGCATGTTTTGTGCCTT+CGG + chr2_4:9818732-9818751 None:intergenic 40.0%
! TGAGTCTAGCTCCTTTCTTA+AGG - chr2_4:9818754-9818773 Msa0314180:CDS 40.0%
! AATGAGGTTTTCCCTGCAAA+GGG - chr2_4:9819370-9819389 Msa0314180:intron 40.0%
GACATCATCATCTCAAGCTA+AGG - chr2_4:9819411-9819430 Msa0314180:intron 40.0%
ATCTCCAAAACCTGACGTTA+AGG - chr2_4:9819486-9819505 Msa0314180:intron 40.0%
ATTGCTTGCAAAAACCTGTG+TGG - chr2_4:9819540-9819559 Msa0314180:intron 40.0%
TATTTGCAGGAGTTGAGTCA+AGG + chr2_4:9819681-9819700 None:intergenic 40.0%
! GGTTTGGATTTGGAACAGTA+AGG + chr2_4:9819895-9819914 None:intergenic 40.0%
!! AGATAGAGCTGGTTTGGATT+TGG + chr2_4:9819905-9819924 None:intergenic 40.0%
! TTTTGCAGATAGAGCTGGTT+TGG + chr2_4:9819911-9819930 None:intergenic 40.0%
AACCAGCTCTATCTGCAAAA+TGG - chr2_4:9819911-9819930 Msa0314180:intron 40.0%
! TACCATTTTGCAGATAGAGC+TGG + chr2_4:9819916-9819935 None:intergenic 40.0%
! TCTAATGTGATTGGTCAGAG+TGG - chr2_4:9819956-9819975 Msa0314180:intron 40.0%
! AGTTCTTTTGCATCTAGCAG+TGG - chr2_4:9819983-9820002 Msa0314180:intron 40.0%
TTCCGAATTCTTGTAGCTTC+AGG - chr2_4:9820107-9820126 Msa0314180:intron 40.0%
GACCTGAAGCTACAAGAATT+CGG + chr2_4:9820112-9820131 None:intergenic 40.0%
TCTTGTAGCTTCAGGTCATT+CGG - chr2_4:9820115-9820134 Msa0314180:intron 40.0%
!!! ACCCAGAGGAATTGTTGTTT+TGG - chr2_4:9820178-9820197 Msa0314180:intron 40.0%
CTGAAGCAGAACGTTGTTAT+AGG - chr2_4:9820217-9820236 Msa0314180:intron 40.0%
!! TATCATTGGCTTATGGAAGC+TGG - chr2_4:9820252-9820271 Msa0314180:intron 40.0%
!! TACATTTCCTTCTCTAGGAC+TGG - chr2_4:9820345-9820364 Msa0314180:intron 40.0%
ACTTGTGAGACTGTTTGACA+GGG - chr2_4:9820406-9820425 Msa0314180:intron 40.0%
AGACTGTTTGACAGGGATTA+TGG - chr2_4:9820413-9820432 Msa0314180:intron 40.0%
ATGCTAACATGGGTGATGAA+TGG - chr2_4:9820748-9820767 Msa0314180:CDS 40.0%
!! TCTATTTTCAGGAGTTGTGG+AGG - chr2_4:9820781-9820800 Msa0314180:CDS 40.0%
TGATAACAGTCCAGATCCAT+AGG + chr2_4:9820913-9820932 None:intergenic 40.0%
TAGATAAACCAGGGGGAAGA+AGG - chr2_4:9816584-9816603 Msa0314180:three_prime_UTR 45.0%
! AGAGTGAAGGGTTTTGCAAG+TGG + chr2_4:9816781-9816800 None:intergenic 45.0%
GAAGAGCGATTGAGAGTGAA+GGG + chr2_4:9816793-9816812 None:intergenic 45.0%
AGAAGAGCGATTGAGAGTGA+AGG + chr2_4:9816794-9816813 None:intergenic 45.0%
TCAGAATTGGAAGAGGGCTT+TGG + chr2_4:9816820-9816839 None:intergenic 45.0%
AAGCTCACGAGGACCTATAT+CGG - chr2_4:9817453-9817472 Msa0314180:CDS 45.0%
TGGTGTAGTCTTCACCTTAC+AGG + chr2_4:9817578-9817597 None:intergenic 45.0%
ACACCACATCTCATCCAACA+TGG - chr2_4:9817615-9817634 Msa0314180:CDS 45.0%
CACCACATCTCATCCAACAT+GGG - chr2_4:9817616-9817635 Msa0314180:CDS 45.0%
TCGTGCAGAAGTAGAGGTAA+AGG + chr2_4:9817704-9817723 None:intergenic 45.0%
AACGTATCGTGCAGAAGTAG+AGG + chr2_4:9817710-9817729 None:intergenic 45.0%
! TGAAGATGGAGAGAAGCACA+GGG + chr2_4:9818126-9818145 None:intergenic 45.0%
! TTGAAGATGGAGAGAAGCAC+AGG + chr2_4:9818127-9818146 None:intergenic 45.0%
ACTGTATACAGTGACACGCA+TGG + chr2_4:9818280-9818299 None:intergenic 45.0%
! ATGCGTGTCACTGTATACAG+TGG - chr2_4:9818279-9818298 Msa0314180:CDS 45.0%
CTGATGTGGATTCTCCTTGT+TGG - chr2_4:9818876-9818895 Msa0314180:CDS 45.0%
TGTGGATTCTCCTTGTTGGA+AGG - chr2_4:9818880-9818899 Msa0314180:CDS 45.0%
GTGGATTCTCCTTGTTGGAA+GGG - chr2_4:9818881-9818900 Msa0314180:CDS 45.0%
CCAATACCAGGAAAGAACTG+TGG + chr2_4:9819010-9819029 None:intergenic 45.0%
CCACAGTTCTTTCCTGGTAT+TGG - chr2_4:9819007-9819026 Msa0314180:intron 45.0%
!! TGATCCAAGAAGCATCTCTG+TGG - chr2_4:9819210-9819229 Msa0314180:intron 45.0%
! GAATGAGGTTTTCCCTGCAA+AGG - chr2_4:9819369-9819388 Msa0314180:intron 45.0%
! GATGATGATGTCGGTGATGT+TGG + chr2_4:9819403-9819422 None:intergenic 45.0%
CCAACCATTACCTTAACGTC+AGG + chr2_4:9819499-9819518 None:intergenic 45.0%
! CCTGACGTTAAGGTAATGGT+TGG - chr2_4:9819496-9819515 Msa0314180:intron 45.0%
CTTGCAAAAACCTGTGTGGA+CGG - chr2_4:9819544-9819563 Msa0314180:intron 45.0%
ATGCAAAAGTAGGCGGTGAA+AGG - chr2_4:9819641-9819660 Msa0314180:intron 45.0%
! TCTTTTGCATCTAGCAGTGG+AGG - chr2_4:9819986-9820005 Msa0314180:intron 45.0%
ACCAAGAACGGCAATGAAGT+TGG - chr2_4:9820013-9820032 Msa0314180:intron 45.0%
ACCAACTTCATTGCCGTTCT+TGG + chr2_4:9820017-9820036 None:intergenic 45.0%
! AAGTTGGTCAGGTACCCATA+TGG - chr2_4:9820029-9820048 Msa0314180:intron 45.0%
TTACTAGCACGCAGCCATAT+GGG + chr2_4:9820046-9820065 None:intergenic 45.0%
AGGTCATTCGGAGAAGTCTA+GGG - chr2_4:9820127-9820146 Msa0314180:intron 45.0%
TGACAAACAAATGCACCCAG+AGG - chr2_4:9820164-9820183 Msa0314180:intron 45.0%
!! TTTCCTTCTCTAGGACTGGT+TGG - chr2_4:9820349-9820368 Msa0314180:intron 45.0%
CACTTGTGAGACTGTTTGAC+AGG - chr2_4:9820405-9820424 Msa0314180:intron 45.0%
GGATCTGGACTGTTATCAAG+AGG - chr2_4:9820915-9820934 Msa0314180:five_prime_UTR 45.0%
!!! TATTCTAAATAAAATTTTAA+AGG + chr2_4:9818562-9818581 None:intergenic 5.0%
TAAACCAGGGGGAAGAAGGA+AGG - chr2_4:9816588-9816607 Msa0314180:three_prime_UTR 50.0%
CCTCGTGAGCTTAACTCAGT+TGG + chr2_4:9817445-9817464 None:intergenic 50.0%
CCAACTGAGTTAAGCTCACG+AGG - chr2_4:9817442-9817461 Msa0314180:CDS 50.0%
GGGACACTACACCTACTATC+AGG + chr2_4:9817482-9817501 None:intergenic 50.0%
GTCCCATGTTGGATGAGATG+TGG + chr2_4:9817621-9817640 None:intergenic 50.0%
! GAAGATGGAGAGAAGCACAG+GGG + chr2_4:9818125-9818144 None:intergenic 50.0%
GGATTCAACACATCAACGGC+AGG + chr2_4:9818635-9818654 None:intergenic 50.0%
! GGGTGATAGTGACACTGATG+TGG - chr2_4:9818862-9818881 Msa0314180:CDS 50.0%
TCCTTGTTGGAAGGGAACAC+CGG - chr2_4:9818889-9818908 Msa0314180:CDS 50.0%
GGATCCACAGAGATGCTTCT+TGG + chr2_4:9819217-9819236 None:intergenic 50.0%
CTGAAAATCCCAGCGCTAGT+AGG - chr2_4:9819341-9819360 Msa0314180:intron 50.0%
TTGGAGAACGACCCTTTGCA+GGG + chr2_4:9819384-9819403 None:intergenic 50.0%
TGAATCAACTCCGTCCACAC+AGG + chr2_4:9819557-9819576 None:intergenic 50.0%
GGCTGCTGCTGTGCATAAAT+TGG + chr2_4:9819767-9819786 None:intergenic 50.0%
GACATTCAAGGGGCTCGAAA+TGG - chr2_4:9819856-9819875 Msa0314180:intron 50.0%
TTTGCATCTAGCAGTGGAGG+TGG - chr2_4:9819989-9820008 Msa0314180:intron 50.0%
! GAACGGCAATGAAGTTGGTC+AGG - chr2_4:9820018-9820037 Msa0314180:intron 50.0%
GTTACTAGCACGCAGCCATA+TGG + chr2_4:9820047-9820066 None:intergenic 50.0%
CAGGTCATTCGGAGAAGTCT+AGG - chr2_4:9820126-9820145 Msa0314180:intron 50.0%
TTGGCTTATGGAAGCTGGTG+TGG - chr2_4:9820257-9820276 Msa0314180:intron 50.0%
CATCCAACCAGTCCTAGAGA+AGG + chr2_4:9820355-9820374 None:intergenic 50.0%
! GAGAGAAGCACAGGGGCTTA+GGG + chr2_4:9818118-9818137 None:intergenic 55.0%
GGAAAGAACTGTGGAGCTCG+AGG + chr2_4:9819001-9819020 None:intergenic 55.0%
CGAGCTCCACAGTTCTTTCC+TGG - chr2_4:9819001-9819020 Msa0314180:intron 55.0%
TTCGCTGACCTACTAGCGCT+GGG + chr2_4:9819352-9819371 None:intergenic 55.0%
ATTCGCTGACCTACTAGCGC+TGG + chr2_4:9819353-9819372 None:intergenic 55.0%
CGCTAGTAGGTCAGCGAATG+AGG - chr2_4:9819354-9819373 Msa0314180:intron 55.0%
GTTGGAGAACGACCCTTTGC+AGG + chr2_4:9819385-9819404 None:intergenic 55.0%
AGTGGAGGTGGCACCAAGAA+CGG - chr2_4:9820001-9820020 Msa0314180:intron 55.0%
GCTTCCTTCCTTCTTCCCCC+TGG + chr2_4:9816595-9816614 None:intergenic 60.0%
! GGAGAGAAGCACAGGGGCTT+AGG + chr2_4:9818119-9818138 None:intergenic 60.0%
GCCGGTGTTCCCTTCCAACA+AGG + chr2_4:9818893-9818912 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 9816501 9821122 9816501 ID=Msa0314180;Name=Msa0314180
chr2_4 mRNA 9816501 9821122 9816501 ID=Msa0314180-mRNA-1;Parent=Msa0314180;Name=Msa0314180-mRNA-1;_AED=0.08;_eAED=0.08;_QI=247|1|1|1|1|1|5|316|608
chr2_4 exon 9816501 9816831 9816501 ID=Msa0314180-mRNA-1:exon:3802;Parent=Msa0314180-mRNA-1
chr2_4 exon 9817321 9817500 9817321 ID=Msa0314180-mRNA-1:exon:3801;Parent=Msa0314180-mRNA-1
chr2_4 exon 9817584 9817757 9817584 ID=Msa0314180-mRNA-1:exon:3800;Parent=Msa0314180-mRNA-1
chr2_4 exon 9817885 9818996 9817885 ID=Msa0314180-mRNA-1:exon:3799;Parent=Msa0314180-mRNA-1
chr2_4 exon 9820530 9821122 9820530 ID=Msa0314180-mRNA-1:exon:3798;Parent=Msa0314180-mRNA-1
chr2_4 five_prime_UTR 9820876 9821122 9820876 ID=Msa0314180-mRNA-1:five_prime_utr;Parent=Msa0314180-mRNA-1
chr2_4 CDS 9820530 9820875 9820530 ID=Msa0314180-mRNA-1:cds;Parent=Msa0314180-mRNA-1
chr2_4 CDS 9817885 9818996 9817885 ID=Msa0314180-mRNA-1:cds;Parent=Msa0314180-mRNA-1
chr2_4 CDS 9817584 9817757 9817584 ID=Msa0314180-mRNA-1:cds;Parent=Msa0314180-mRNA-1
chr2_4 CDS 9817321 9817500 9817321 ID=Msa0314180-mRNA-1:cds;Parent=Msa0314180-mRNA-1
chr2_4 CDS 9816817 9816831 9816817 ID=Msa0314180-mRNA-1:cds;Parent=Msa0314180-mRNA-1
chr2_4 three_prime_UTR 9816501 9816816 9816501 ID=Msa0314180-mRNA-1:three_prime_utr;Parent=Msa0314180-mRNA-1
Gene Sequence

>Msa0314180

ATGATGAATCAAAACACTTCTCGTTTGTCACCACTTGCAAAACCCTTCACTCTCAATCGCTCTTCTACACCAAAGCCCTCTTCCAATTCTGACAATCATGATGACCCTTTTAGTTCTTTGCTTGATTCTTTTCGACAAACTAGTTTCAGTTCAAAGGGTCGTTCTGTATTGTTGAATGACACTGTCAAAATTTCAACTTTGCCAGCTCAAGGTGATGAAAGTTTGCGTTTTGAAGAACACCCTTTTCTGGAATTGCATAAAAATGGTGACTTTGAAGTTGATGTGCTTAATTGGTCACACTTTGAAGTTGCTAATACAGCTAGTGATGTGAACATGTTTCAAAAAGATAAGCCTGCCGTTGATGTGTTGAATCCCTTTCTAAAAGTGTCTGATGGCATTTTTGAAAACAACACCTGTACAATTGTGGGAAAAGACATTCTATCGAATTCCGAAGGCACAAAACATGCTGTTGATGAGTCTAGCTCCTTTCTTAAGGCACAAAACAAGGTTGCCCCACTGAAGATATCAACTGATATGTCTTCTGCTAAAAGCACTCCTCAAAATCCGTTCTCTAATAATTTGGGTGATAGTGACACTGATGTGGATTCTCCTTGTTGGAAGGGAACACCGGCTCTAAGTTTAATTCCATCGGAAATTTCACAATCTGTACAATTTCATCATGTTGAGAAACCAACAGAAAAACATAATACTTTAAATCCTCGAGCTCCACAGTTCTTTCCTGGTATTGGATATGTTAAGGACGGTTTTGTCTCTTCGAACTCTAGCGCGCCTGTAACTACTAATTTGTTGTTGGGAGAGGACATACTCATGAAAACTGTCATGGAAGAATCTCTAGTAGATTTTAATATGGGAGAGTTTCAGTATTCAACCAACATCAACGGAATAGAAATGGCATTTAATATGATTAATGATCCAAGAAGCATCTCTGTGGATCCTCTGCTAAATTCACATTCTATGATGACTCAGTCTTCATCAATAGAAGCAACTTCAAAAGAAAAACTTGTAACTATAGGCGATGTTGATGACTTTGTAAAGGGAACTGAAAATCCCAGCGCTAGTAGGTCAGCGAATGAGGTTTTCCCTGCAAAGGGTCGTTCTCCAACATCACCGACATCATCATCTCAAGCTAAGGTTTTTACTGATCTTCTAAAAAGATTTGAAGGTTTCTCCAAGTCTTTAATTGAATCTCCAAAACCTGACGTTAAGGTAATGGTTGGCGCAATGCATGTTCTTTCAGAATTGCTTGCAAAAACCTGTGTGGACGGAGTTGATTCATATTGTGAACATGATCTTAGTAGGACTATGATCCTGCAAATAATCAATAATCTGAATGATTTTAATGCAAAAGTAGGCGGTGAAAGGACTTCAACTTCAATCCTTGACTCAACTCCTGCAAATAGTTCTTTTTATCTTGATAGATCATTAAAGGTTACCAAGGGGCTCGAAATGGAAAATGTAGAGACCCTTACTGTTCCAAATCCAAACCAGCTCTATCTGCAAAATGGTAATACTGGAAAAGCTATAGTTTCTAATGTGATTGGTCAGAGTGGACTGAGTTCTTTTGCATCTAGCAGTGGAGGTGGCACCAAGAACGGCAATGAAGTTGGTCAGCTTCAGGTCATTCGGAGAAGTCTAGGGAAAAATCTTGATTTTGACAAACAAATGCACCCAGAGGAATTGTTGTTTTGGAATTTATGGCTTGATTCTGAAGCAGAACGTTGTTATAGGAAATTTAAAACTTATCATTGGCTTATGGAAGCTGGTGTGGATGTAAATTGCAAAAATGTTGCGGAGTTGTGGAGGTGA
Protein sequence

>Msa0314180

MMNQNTSRLSPLAKPFTLNRSSTPKPSSNSDNHDDPFSSLLDSFRQTSFSSKGRSVLLNDTVKISTLPAQGDESLRFEEHPFLELHKNGDFEVDVLNWSHFEVANTASDVNMFQKDKPAVDVLNPFLKVSDGIFENNTCTIVGKDILSNSEGTKHAVDESSSFLKAQNKVAPLKISTDMSSAKSTPQNPFSNNLGDSDTDVDSPCWKGTPALSLIPSEISQSVQFHHVEKPTEKHNTLNPRAPQFFPGIGYVKDGFVSSNSSAPVTTNLLLGEDILMKTVMEESLVDFNMGEFQYSTNINGIEMAFNMINDPRSISVDPLLNSHSMMTQSSSIEATSKEKLVTIGDVDDFVKGTENPSASRSANEVFPAKGRSPTSPTSSSQAKVFTDLLKRFEGFSKSLIESPKPDVKVMVGAMHVLSELLAKTCVDGVDSYCEHDLSRTMILQIINNLNDFNAKVGGERTSTSILDSTPANSSFYLDRSLKVTKGLEMENVETLTVPNPNQLYLQNGNTGKAIVSNVIGQSGLSSFASSSGGGTKNGNEVGQLQVIRRSLGKNLDFDKQMHPEELLFWNLWLDSEAERCYRKFKTYHWLMEAGVDVNCKNVAELWR*