AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0277590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0277590 MtrunA17_Chr2g0286081 95.758 165 7 0 1 165 1 165 5.54e-108 305
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0277590 AT4G18270.1 62.424 165 62 0 1 165 316 480 5.80e-53 175

Find 159 sgRNAs with CRISPR-Local

Find 506 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCACTAGGCCTTGTGTATT+TGG 0.109524 2_3:+10191227 Msa0277590:five_prime_UTR
TAATCAGAGCTTGCTATATT+TGG 0.146023 2_3:+10192003 Msa0277590:intron
ATTTCTTATATCAGCCATTT+TGG 0.190514 2_3:+10189655 Msa0277590:five_prime_UTR
TTAAGTTCACAAGGTGAAAA+TGG 0.202946 2_3:-10194040 None:intergenic
CTTAAAATATTGAACCATTA+TGG 0.257345 2_3:-10194173 None:intergenic
TATGCACCTAGTACAATATT+TGG 0.265796 2_3:-10193807 None:intergenic
TTCTGCTTCTGCATCAAATA+AGG 0.305053 2_3:+10188982 Msa0277590:five_prime_UTR
CGCTGGAGGCATTGCTGCAT+TGG 0.325156 2_3:+10191332 Msa0277590:CDS
GTCGTCATTAGTTATTCTTC+AGG 0.329909 2_3:+10192197 Msa0277590:CDS
ACATATTAAATCTTGATCAT+TGG 0.337478 2_3:+10194128 Msa0277590:three_prime_UTR
ATCACTATGGGGCTTATAAT+CGG 0.349710 2_3:+10189548 Msa0277590:five_prime_UTR
AGAGACGGAGAGGGAGATTT+CGG 0.352754 2_3:-10187989 None:intergenic
CCTTGTGAACTTAAGAAGAT+TGG 0.353244 2_3:+10194049 Msa0277590:three_prime_UTR
ATATCTGATTTCATCTGTAT+TGG 0.361680 2_3:+10193827 Msa0277590:CDS
AATGGACGGGTCAGGTAAAA+AGG 0.361744 2_3:-10189635 None:intergenic
CCACTAGGCCTTGTGTATTT+GGG 0.365665 2_3:+10191228 Msa0277590:five_prime_UTR
TGATATCTGTTCTATTGATT+AGG 0.368244 2_3:+10191134 Msa0277590:five_prime_UTR
AAATTAGCAGATGCTCTTGA+TGG 0.370803 2_3:+10191306 Msa0277590:CDS
AAATGGAGGCGGCGATAAAA+AGG 0.371959 2_3:-10193768 None:intergenic
GCCAGCATATCTTCACCTTA+TGG 0.376991 2_3:+10190209 Msa0277590:five_prime_UTR
ATCAAATAAGGATGCTTTAA+CGG 0.379467 2_3:+10188994 Msa0277590:five_prime_UTR
ATGTTTCTTGTCAATGTACT+TGG 0.392169 2_3:-10194109 None:intergenic
TAAACCCCTCCAATGATTCT+TGG 0.397023 2_3:-10189930 None:intergenic
TGCTATATTTGGAGCTTCAA+TGG 0.399920 2_3:+10192014 Msa0277590:CDS
GTTCTCTGAACCTGCGCAAA+TGG 0.401032 2_3:-10193785 None:intergenic
GCGTATGACGTACTCTCTTC+AGG 0.404809 2_3:-10188890 None:intergenic
TTATTCTTCCTCTTCTCGCT+TGG 0.408794 2_3:+10188061 Msa0277590:five_prime_UTR
ACTGCAATGGCTGCATGTAC+TGG 0.409624 2_3:+10192129 Msa0277590:CDS
GGCGCGAGTATATTCCATTC+TGG 0.409725 2_3:-10187863 None:intergenic
GCCAGCAAAAGAAACCAAAA+TGG 0.415429 2_3:-10189669 None:intergenic
ATCAAAGTCTTCGCCGTCAC+TGG 0.415715 2_3:-10188918 None:intergenic
TCTTAACATTAATATTTGTC+AGG 0.418021 2_3:+10191106 Msa0277590:five_prime_UTR
TTCCCGCTACTAATTTCCTC+TGG 0.419425 2_3:+10192159 Msa0277590:CDS
GCTGTACTTCCAATATGTTC+TGG 0.422943 2_3:+10191375 Msa0277590:CDS
TCATCTGTATTGGCTTTGCT+TGG 0.425168 2_3:+10193837 Msa0277590:CDS
AAAATTCCCTTTCTCCAGAA+TGG 0.427098 2_3:+10187849 Msa0277590:five_prime_UTR
AGGGAAGAGGAAGAAGAAGA+AGG 0.431739 2_3:-10188035 None:intergenic
AAAATGGCTGATATAAGAAA+TGG 0.434148 2_3:-10189653 None:intergenic
GGGAAGAGGAAGAAGAAGAA+GGG 0.435811 2_3:-10188034 None:intergenic
TGATACTAACCAGAACATAT+TGG 0.436964 2_3:-10191384 None:intergenic
ACCTCATCTATAGAAGTGTC+TGG 0.437182 2_3:+10189845 Msa0277590:five_prime_UTR
TGAGCAACAATTATACCAAT+AGG 0.440167 2_3:-10189809 None:intergenic
TAAACCTCACCAAGAATCAT+TGG 0.440625 2_3:+10189921 Msa0277590:five_prime_UTR
AAGAAGAGAGGGCAAGTAAG+AGG 0.441874 2_3:-10191173 None:intergenic
TCTGTATTGGCTTTGCTTGG+CGG 0.445037 2_3:+10193840 Msa0277590:CDS
CAATGTACTTGGGTTCTCAA+TGG 0.446871 2_3:-10194098 None:intergenic
GCTCATCGGCTTGTAACCAT+TGG 0.450505 2_3:+10189022 Msa0277590:five_prime_UTR
AAGAAGAAGAAGGGAGAGAG+AGG 0.451359 2_3:-10188025 None:intergenic
TAAGTTCACAAGGTGAAAAT+GGG 0.456951 2_3:-10194039 None:intergenic
GGAGGGGACACAAGAATCAT+AGG 0.464676 2_3:+10189044 Msa0277590:five_prime_UTR
CTCTTAGACATCACTTGAAA+AGG 0.469312 2_3:+10189753 Msa0277590:five_prime_UTR
GTTCGACGAAATGTTTCTAC+TGG 0.470389 2_3:+10188235 Msa0277590:five_prime_UTR
TACACAAGGCCTAGTGGTAG+TGG 0.472537 2_3:-10191222 None:intergenic
GCCATTGTTGCTTGATAACA+TGG 0.478343 2_3:-10189730 None:intergenic
CTCATCGGCTTGTAACCATT+GGG 0.481458 2_3:+10189023 Msa0277590:five_prime_UTR
TTATGAAATGAAATATAGAA+TGG 0.483672 2_3:-10187890 None:intergenic
CCCTCCAATGATTCTTGGTG+AGG 0.483696 2_3:-10189925 None:intergenic
GCTTTGCTTGGCGGATATGT+TGG 0.485424 2_3:+10193849 Msa0277590:CDS
AAGACAGGATCTTTAGCCCT+TGG 0.487972 2_3:+10192096 Msa0277590:CDS
ATATTTGGAGCTTCAATGGC+GGG 0.492142 2_3:+10192018 Msa0277590:CDS
TTGGAGGGGTTTACCAGCAT+TGG 0.494094 2_3:+10189940 Msa0277590:five_prime_UTR
GTCTTCGCCGTCACTGGATG+AGG 0.497306 2_3:-10188912 None:intergenic
ATATAAGAAATGGACGGGTC+AGG 0.498732 2_3:-10189643 None:intergenic
AAATGAAATATAGAATGGAA+TGG 0.499059 2_3:-10187885 None:intergenic
GGAAGAATAAACGAGGGAAG+AGG 0.499758 2_3:-10188048 None:intergenic
AATGAAATATAGAATGGAAT+GGG 0.500448 2_3:-10187884 None:intergenic
GTATATTCCATTCTGGAGAA+AGG 0.501086 2_3:-10187856 None:intergenic
AGTGACGGCGAAGACTTTGA+TGG 0.502613 2_3:+10188920 Msa0277590:five_prime_UTR
TATATTCCATTCTGGAGAAA+GGG 0.508402 2_3:-10187855 None:intergenic
GGCTGATATAAGAAATGGAC+GGG 0.509397 2_3:-10189648 None:intergenic
GATACTACACAGGTAGCTGT+TGG 0.509924 2_3:+10190158 Msa0277590:intron
GCCATAAGGTGAAGATATGC+TGG 0.512128 2_3:-10190210 None:intergenic
AAAAGGTGGACACCCACGTT+GGG 0.514119 2_3:+10189770 Msa0277590:five_prime_UTR
TCAATGGCGGGATCTTGTGT+TGG 0.516188 2_3:+10192030 Msa0277590:CDS
CACTTCTATAGATGAGGTAT+CGG 0.516347 2_3:-10189840 None:intergenic
CCTCATCTATAGAAGTGTCT+GGG 0.518015 2_3:+10189846 Msa0277590:five_prime_UTR
ACAGGATCTTTAGCCCTTGG+TGG 0.518256 2_3:+10192099 Msa0277590:CDS
AGAGTGAGAGAGTAGATCTG+AGG 0.519957 2_3:-10187931 None:intergenic
GGCAAATCAACATCATGCAC+CGG 0.521106 2_3:-10188959 None:intergenic
GAGAAAACTTCTACCAATGC+TGG 0.524192 2_3:-10189953 None:intergenic
AAGACAAGAACGAGAAGTCA+TGG 0.525739 2_3:-10187958 None:intergenic
ACAATTGCATTTGCAGCAGT+CGG 0.526407 2_3:+10189881 Msa0277590:five_prime_UTR
ACCTGGTATCCTCGTTATGT+TGG 0.534785 2_3:+10193979 Msa0277590:three_prime_UTR
TCTCTTCTTTACTTACATGC+AGG 0.539721 2_3:+10191187 Msa0277590:five_prime_UTR
GATGCTCTTGATGGACTCGC+TGG 0.542083 2_3:+10191315 Msa0277590:CDS
ATTCTTGTGTCCCCTCCCAA+TGG 0.546553 2_3:-10189038 None:intergenic
AAGAAGGTATACATGCCATA+AGG 0.547084 2_3:-10190224 None:intergenic
TGAGGAGAGAATGAAGAAAA+CGG 0.547410 2_3:-10187913 None:intergenic
ATCGCCGCCTCCATTTGCGC+AGG 0.553524 2_3:+10193775 Msa0277590:CDS
CTTTAACGGTGGCTGCTCAT+CGG 0.555401 2_3:+10189008 Msa0277590:five_prime_UTR
TGGTGGTGCATTAACTGCAA+TGG 0.555617 2_3:+10192116 Msa0277590:CDS
TTCCAGAGGAAATTAGTAGC+GGG 0.559099 2_3:-10192161 None:intergenic
TGTTTCTTGTCAATGTACTT+GGG 0.559534 2_3:-10194108 None:intergenic
CTCTGAACCTGCGCAAATGG+AGG 0.563261 2_3:-10193782 None:intergenic
GTCACGTGAAACTTCTCATA+CGG 0.565582 2_3:+10193898 Msa0277590:three_prime_UTR
TGAAACTTCTCATACTTACC+TGG 0.565775 2_3:+10193962 Msa0277590:three_prime_UTR
GCAAATCAACATCATGCACC+GGG 0.566415 2_3:-10188958 None:intergenic
AGGTGGACACCCACGTTGGG+TGG 0.567293 2_3:+10189773 Msa0277590:five_prime_UTR
ACTACACAGGTAGCTGTTGG+AGG 0.567420 2_3:+10190161 Msa0277590:intron
TTTATGGAAGTAAGAAACTG+TGG 0.567537 2_3:-10191077 None:intergenic
TGAACCTGCGCAAATGGAGG+CGG 0.570674 2_3:-10193779 None:intergenic
ACCAACATAACGAGGATACC+AGG 0.572849 2_3:-10193980 None:intergenic
TGCAGTTAATGCACCACCAA+GGG 0.574611 2_3:-10192112 None:intergenic
TTATTTGATGCAGAAGCAGA+AGG 0.577035 2_3:-10188980 None:intergenic
AGAGAACCAAATATTGTACT+AGG 0.577972 2_3:+10193801 Msa0277590:CDS
TGGTGACATCTTTCTTACCC+CGG 0.579457 2_3:+10188940 Msa0277590:five_prime_UTR
GATAAACCTTACATCATCGA+AGG 0.580257 2_3:-10188260 None:intergenic
CCAATCTTCTTAAGTTCACA+AGG 0.580288 2_3:-10194049 None:intergenic
AAATAAGGATGCTTTAACGG+TGG 0.581346 2_3:+10188997 Msa0277590:five_prime_UTR
CTTGGATTGCGCCATCGTGA+AGG 0.582180 2_3:+10188079 Msa0277590:five_prime_UTR
GAATACGAGAGAGACGGAGA+GGG 0.583150 2_3:-10187998 None:intergenic
GCGTAAAACAAACCCTCTTG+TGG 0.585661 2_3:-10194015 None:intergenic
GGCGCAATCCAAGCGAGAAG+AGG 0.591328 2_3:-10188069 None:intergenic
CCCAGACACTTCTATAGATG+AGG 0.593607 2_3:-10189846 None:intergenic
ACATTACTCCCACTACCACT+AGG 0.597149 2_3:+10191213 Msa0277590:five_prime_UTR
TCGGCTTGTAACCATTGGGA+GGG 0.601989 2_3:+10189027 Msa0277590:five_prime_UTR
GCATGTAAGTAAAGAAGAGA+GGG 0.602140 2_3:-10191184 None:intergenic
TTAGACATCACTTGAAAAGG+TGG 0.605468 2_3:+10189756 Msa0277590:five_prime_UTR
AAAACAAACCCTCTTGTGGT+TGG 0.606710 2_3:-10194011 None:intergenic
ACCTCACCAAGAATCATTGG+AGG 0.607124 2_3:+10189924 Msa0277590:five_prime_UTR
TATTGTACTTGAAGATAACA+AGG 0.607836 2_3:+10193706 Msa0277590:CDS
GCTCTTGATGGACTCGCTGG+AGG 0.611643 2_3:+10191318 Msa0277590:CDS
CCCAAATACACAAGGCCTAG+TGG 0.612111 2_3:-10191228 None:intergenic
ATCGGCTTGTAACCATTGGG+AGG 0.613091 2_3:+10189026 Msa0277590:five_prime_UTR
TGATCAGATTAGTAACAAGA+AGG 0.615349 2_3:-10190240 None:intergenic
TATATGTAGATTGGTGTGTG+TGG 0.617526 2_3:+10189588 Msa0277590:five_prime_UTR
TCTAGAACACCAACCACAAG+AGG 0.620175 2_3:+10194002 Msa0277590:three_prime_UTR
AACAACATGAGGTCAAGAGT+TGG 0.629730 2_3:-10191260 None:intergenic
CTCACCAAGAATCATTGGAG+GGG 0.629795 2_3:+10189926 Msa0277590:five_prime_UTR
TGCATGTAAGTAAAGAAGAG+AGG 0.629854 2_3:-10191185 None:intergenic
GGCGATGAATACGAGAGAGA+CGG 0.630294 2_3:-10188004 None:intergenic
CTACACAGGTAGCTGTTGGA+GGG 0.630669 2_3:+10190162 Msa0277590:intron
CGGCTTGTAACCATTGGGAG+GGG 0.632376 2_3:+10189028 Msa0277590:five_prime_UTR
TATATTTGGAGCTTCAATGG+CGG 0.633674 2_3:+10192017 Msa0277590:CDS
CCTCACCAAGAATCATTGGA+GGG 0.634738 2_3:+10189925 Msa0277590:five_prime_UTR
TGAGCTGTATTGTTGAATAA+CGG 0.635678 2_3:-10188209 None:intergenic
ACACAAGGCCTAGTGGTAGT+GGG 0.640117 2_3:-10191221 None:intergenic
TGGCTGATATAAGAAATGGA+CGG 0.641051 2_3:-10189649 None:intergenic
ATTGTACTTGAAGATAACAA+GGG 0.641782 2_3:+10193707 Msa0277590:CDS
TAATTTAACACCATGTCCCA+TGG 0.642697 2_3:-10191289 None:intergenic
GACGGAGAGGGAGATTTCGG+TGG 0.643857 2_3:-10187986 None:intergenic
TCCATGTTATCAAGCAACAA+TGG 0.646868 2_3:+10189729 Msa0277590:five_prime_UTR
ATTCCAGAGGAAATTAGTAG+CGG 0.647561 2_3:-10192162 None:intergenic
CATGGAAACAAAACAACATG+AGG 0.648409 2_3:-10191271 None:intergenic
CTCATCTATAGAAGTGTCTG+GGG 0.650632 2_3:+10189847 Msa0277590:five_prime_UTR
TTGCAGTTAATGCACCACCA+AGG 0.654206 2_3:-10192113 None:intergenic
TTGTACTTGAAGATAACAAG+GGG 0.656930 2_3:+10193708 Msa0277590:CDS
CTCAACTATGAAAATTCCAG+AGG 0.662510 2_3:-10192175 None:intergenic
TGAATACGAGAGAGACGGAG+AGG 0.670307 2_3:-10187999 None:intergenic
AGAAGAGGAAGAATAAACGA+GGG 0.672110 2_3:-10188054 None:intergenic
GGACTCCAATCATCGAGTAG+CGG 0.674997 2_3:-10188869 None:intergenic
CTAGAACACCAACCACAAGA+GGG 0.695730 2_3:+10194003 Msa0277590:three_prime_UTR
GAGAAGAGGAAGAATAAACG+AGG 0.699532 2_3:-10188055 None:intergenic
GAAAAGGTGGACACCCACGT+TGG 0.700688 2_3:+10189769 Msa0277590:five_prime_UTR
GAAGAAGAATACCTTCACGA+TGG 0.711424 2_3:-10188090 None:intergenic
AATATCGTCCCAAATACACA+AGG 0.714854 2_3:-10191236 None:intergenic
TGTTCTAGACCAACATAACG+AGG 0.717856 2_3:-10193988 None:intergenic
TCATACGCCTCATCCAGTGA+CGG 0.726854 2_3:+10188905 Msa0277590:five_prime_UTR
CAAATCAACATCATGCACCG+GGG 0.753660 2_3:-10188957 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GGAATTTATTTTAAAAATAA+TGG + chr2_3:10189219-10189238 Msa0277590:intron 10.0%
!!! AATGTTAAGAATTTTTTTTA+TGG - chr2_3:10191096-10191115 None:intergenic 10.0%
!! TGTATATGAATTAATAAAAT+TGG + chr2_3:10191588-10191607 Msa0277590:intron 10.0%
!! AAAAATCAGATATAAATTTA+TGG - chr2_3:10192246-10192265 None:intergenic 10.0%
!! AGAAAAGAAAAAAAAAAAAA+AGG - chr2_3:10192337-10192356 None:intergenic 10.0%
!! TTATGAAATGAAATATAGAA+TGG - chr2_3:10187893-10187912 None:intergenic 15.0%
!!! TTAATCATTTGACTTATTTT+CGG + chr2_3:10188700-10188719 Msa0277590:intron 15.0%
!!! AGTATTTTATAGCATTAATA+TGG + chr2_3:10189154-10189173 Msa0277590:intron 15.0%
!! TAATATGGTTTATAGAAATT+TGG + chr2_3:10189169-10189188 Msa0277590:intron 15.0%
!!! TTTTAAAATAAATTCCTTAG+AGG - chr2_3:10189215-10189234 None:intergenic 15.0%
!!! AGATTTCATTAATTTTTTGT+CGG + chr2_3:10189365-10189384 Msa0277590:intron 15.0%
!!! TAATTTGAAGCATTATTTTT+TGG + chr2_3:10190002-10190021 Msa0277590:intron 15.0%
!! AATTTCTTTATAAAATCACA+TGG + chr2_3:10190667-10190686 Msa0277590:intron 15.0%
!!! TAGTGTAAATAATGTAATTT+TGG + chr2_3:10191507-10191526 Msa0277590:intron 15.0%
!!! ATTTTGTATTTTGATCAATT+TGG - chr2_3:10192605-10192624 None:intergenic 15.0%
!!! TATTTTTCATACGAAATTAA+GGG + chr2_3:10192717-10192736 Msa0277590:intron 15.0%
!!! TAAAGTGTATTATAGTATTT+TGG - chr2_3:10193030-10193049 None:intergenic 15.0%
!!! ATAGTTTTAATTTTACATCT+TGG + chr2_3:10193053-10193072 Msa0277590:intron 15.0%
!! GACATTAAAGTTTAAATAAA+TGG - chr2_3:10193425-10193444 None:intergenic 15.0%
!!! AATTTTTAACTTTGTCATTA+TGG - chr2_3:10194076-10194095 None:intergenic 15.0%
!! AATGAAATATAGAATGGAAT+GGG - chr2_3:10187887-10187906 None:intergenic 20.0%
!! AAATGAAATATAGAATGGAA+TGG - chr2_3:10187888-10187907 None:intergenic 20.0%
!! ATAATCCAATCAATATAGAT+TGG - chr2_3:10188491-10188510 None:intergenic 20.0%
!!! ATCTATATTGATTGGATTAT+AGG + chr2_3:10188491-10188510 Msa0277590:intron 20.0%
!!! TCTATATTGATTGGATTATA+GGG + chr2_3:10188492-10188511 Msa0277590:intron 20.0%
!!! TAATCATTTGACTTATTTTC+GGG + chr2_3:10188701-10188720 Msa0277590:intron 20.0%
!!! ATGAAATATTCCTTTGAAAA+GGG - chr2_3:10189113-10189132 None:intergenic 20.0%
!!! TATGAAATATTCCTTTGAAA+AGG - chr2_3:10189114-10189133 None:intergenic 20.0%
!! ATACATAAATGTAATACATG+CGG - chr2_3:10189253-10189272 None:intergenic 20.0%
!! AATGAAATCTCAATTCATTT+AGG - chr2_3:10189355-10189374 None:intergenic 20.0%
!! AAATCATTAAAACGTGAATT+GGG - chr2_3:10189505-10189524 None:intergenic 20.0%
!! AAAATCATTAAAACGTGAAT+TGG - chr2_3:10189506-10189525 None:intergenic 20.0%
!!! TACTACTTTTATATGTAGAT+TGG + chr2_3:10189579-10189598 Msa0277590:five_prime_UTR 20.0%
!!! CTTTAAAATGACGAAAAATT+GGG - chr2_3:10189706-10189725 None:intergenic 20.0%
!!! AATCTTAATCTAAGATATAC+TGG - chr2_3:10190118-10190137 None:intergenic 20.0%
!!! TGTAATAGGAAAATTTTAAG+TGG + chr2_3:10190510-10190529 Msa0277590:intron 20.0%
!!! GTAATAGGAAAATTTTAAGT+GGG + chr2_3:10190511-10190530 Msa0277590:intron 20.0%
!!! TAATAGGAAAATTTTAAGTG+GGG + chr2_3:10190512-10190531 Msa0277590:intron 20.0%
!! GCAAATGATAAAAGTAAAAA+TGG - chr2_3:10190930-10190949 None:intergenic 20.0%
!! AAAGAATGAAAAAAAGTTGA+GGG - chr2_3:10191007-10191026 None:intergenic 20.0%
!! AAAAGAATGAAAAAAAGTTG+AGG - chr2_3:10191008-10191027 None:intergenic 20.0%
!! TCTTAACATTAATATTTGTC+AGG + chr2_3:10191106-10191125 Msa0277590:five_prime_UTR 20.0%
!!! TACACTATATTCTCTATTTT+AGG - chr2_3:10191494-10191513 None:intergenic 20.0%
!! ATTTAACTCGTGAAATAAAA+AGG - chr2_3:10192274-10192293 None:intergenic 20.0%
!!! TTCTTTTCTTCTTTTCAAAT+CGG + chr2_3:10192348-10192367 Msa0277590:intron 20.0%
!! TAAAAATGTGAAGTTATTGA+TGG + chr2_3:10192511-10192530 Msa0277590:intron 20.0%
!! AAAATTGAATGAATGAGAAT+AGG + chr2_3:10192620-10192639 Msa0277590:intron 20.0%
!! AAATTGAATGAATGAGAATA+GGG + chr2_3:10192621-10192640 Msa0277590:intron 20.0%
!!! CTATTTTTCATACGAAATTA+AGG + chr2_3:10192716-10192735 Msa0277590:intron 20.0%
!!! ATAAACTATAGTTCTAGAAA+TGG + chr2_3:10192763-10192782 Msa0277590:intron 20.0%
!!! TGTATTATAGTATTTTGGTT+GGG - chr2_3:10193025-10193044 None:intergenic 20.0%
!! TTAAAGTTTAAATAAATGGC+AGG - chr2_3:10193421-10193440 None:intergenic 20.0%
!!! CGGATAATATCTTTTAATTA+TGG - chr2_3:10193625-10193644 None:intergenic 20.0%
!! TAAAGCAAGCTATTAAAATT+TGG - chr2_3:10193672-10193691 None:intergenic 20.0%
!! ACATATTAAATCTTGATCAT+TGG + chr2_3:10194128-10194147 Msa0277590:three_prime_UTR 20.0%
!! CTTAAAATATTGAACCATTA+TGG - chr2_3:10194176-10194195 None:intergenic 20.0%
! TATTAGCTAATCTAATAACC+TGG + chr2_3:10188338-10188357 Msa0277590:intron 25.0%
!!! TCGCATATATTTAGTTTTGA+GGG + chr2_3:10188548-10188567 Msa0277590:intron 25.0%
! AATGTGTCAAATGAACTAAT+TGG + chr2_3:10188589-10188608 Msa0277590:intron 25.0%
! ATTTGACACATTGATCAAAA+TGG - chr2_3:10188628-10188647 None:intergenic 25.0%
!! GTGTCAAGAATTTAGTTTAT+AGG + chr2_3:10188653-10188672 Msa0277590:intron 25.0%
!!! AATCATTTGACTTATTTTCG+GGG + chr2_3:10188702-10188721 Msa0277590:intron 25.0%
!!! TGACATTTGTTATGTTTTAC+AGG + chr2_3:10188832-10188851 Msa0277590:intron 25.0%
! ATCAAATAAGGATGCTTTAA+CGG + chr2_3:10188994-10189013 Msa0277590:five_prime_UTR 25.0%
!!! GTTTTTTATACCCTTTTCAA+AGG + chr2_3:10189100-10189119 Msa0277590:intron 25.0%
! AAAATGGCTGATATAAGAAA+TGG - chr2_3:10189656-10189675 None:intergenic 25.0%
!! ATTTCTTATATCAGCCATTT+TGG + chr2_3:10189655-10189674 Msa0277590:five_prime_UTR 25.0%
!!! GCTTTAAAATGACGAAAAAT+TGG - chr2_3:10189707-10189726 None:intergenic 25.0%
!!! GGTTTATTTTTTGTACCTAT+TGG + chr2_3:10189794-10189813 Msa0277590:five_prime_UTR 25.0%
!!! ACCAAGATAGAACTTTTTTA+GGG - chr2_3:10190069-10190088 None:intergenic 25.0%
! TGTGTAGTATCAAAAAGAAA+TGG - chr2_3:10190149-10190168 None:intergenic 25.0%
!! ATTTCTTTTTGATACTACAC+AGG + chr2_3:10190148-10190167 Msa0277590:intron 25.0%
!!! CTAGTTTTAATCTTTCTCAT+CGG + chr2_3:10190422-10190441 Msa0277590:intron 25.0%
! TGAAAATTCTACTCAATGTT+AGG + chr2_3:10190485-10190504 Msa0277590:intron 25.0%
!!! AATAGGAAAATTTTAAGTGG+GGG + chr2_3:10190513-10190532 Msa0277590:intron 25.0%
!!! TTTCTTTGAAATTCTAGAAG+AGG + chr2_3:10190539-10190558 Msa0277590:intron 25.0%
!!! TTCTTTGAAATTCTAGAAGA+GGG + chr2_3:10190540-10190559 Msa0277590:intron 25.0%
!! GCAGTTTATAAGAATCTTTT+TGG + chr2_3:10190581-10190600 Msa0277590:intron 25.0%
!! ATAAGAATCTTTTTGGACTT+TGG + chr2_3:10190588-10190607 Msa0277590:intron 25.0%
!! TGATATCTGTTCTATTGATT+AGG + chr2_3:10191134-10191153 Msa0277590:five_prime_UTR 25.0%
! CTTGAAATATAGTATCTTCA+AGG + chr2_3:10191429-10191448 Msa0277590:intron 25.0%
!! TTGAACATGATAATGCAATA+GGG + chr2_3:10191560-10191579 Msa0277590:intron 25.0%
!!! TATTTGAGATTTCTCTGTTT+TGG + chr2_3:10191697-10191716 Msa0277590:intron 25.0%
! TAATATTGTTCAGTCTGAAA+AGG - chr2_3:10191848-10191867 None:intergenic 25.0%
!!! ATACAAAGCATCTGTTTTTA+TGG + chr2_3:10192071-10192090 Msa0277590:CDS 25.0%
!!! TACAAAGCATCTGTTTTTAT+GGG + chr2_3:10192072-10192091 Msa0277590:CDS 25.0%
! CCTCTTAAAAAATCATTAGA+AGG - chr2_3:10192539-10192558 None:intergenic 25.0%
!!! CCTTCTAATGATTTTTTAAG+AGG + chr2_3:10192536-10192555 Msa0277590:intron 25.0%
!!! TTGTATTTTGATCAATTTGG+CGG - chr2_3:10192602-10192621 None:intergenic 25.0%
! TTTCGTATGAAAAATAGAGA+GGG - chr2_3:10192713-10192732 None:intergenic 25.0%
! ATTTCGTATGAAAAATAGAG+AGG - chr2_3:10192714-10192733 None:intergenic 25.0%
! TAGTTTATATACCAAACCTT+GGG - chr2_3:10192751-10192770 None:intergenic 25.0%
! ATAGTTTATATACCAAACCT+TGG - chr2_3:10192752-10192771 None:intergenic 25.0%
! TATACACTCAACATTAGTAA+TGG + chr2_3:10192804-10192823 Msa0277590:intron 25.0%
!!! TATTATAGTATTTTGGTTGG+GGG - chr2_3:10193023-10193042 None:intergenic 25.0%
!!! GTATTATAGTATTTTGGTTG+GGG - chr2_3:10193024-10193043 None:intergenic 25.0%
!!! GTGTATTATAGTATTTTGGT+TGG - chr2_3:10193026-10193045 None:intergenic 25.0%
! CATAAACTACTACAAGATAA+AGG - chr2_3:10193504-10193523 None:intergenic 25.0%
! CATAAACTACTACAAGATAA+AGG - chr2_3:10193504-10193523 None:intergenic 25.0%
! TATTGTACTTGAAGATAACA+AGG + chr2_3:10193706-10193725 Msa0277590:CDS 25.0%
! ATTGTACTTGAAGATAACAA+GGG + chr2_3:10193707-10193726 Msa0277590:CDS 25.0%
! ATATCTGATTTCATCTGTAT+TGG + chr2_3:10193827-10193846 Msa0277590:CDS 25.0%
!!! ATTTTTTAACTTCGCCATAA+TGG + chr2_3:10194159-10194178 Msa0277590:three_prime_UTR 25.0%
! TATATTCCATTCTGGAGAAA+GGG - chr2_3:10187858-10187877 None:intergenic 30.0%
TGAGCTGTATTGTTGAATAA+CGG - chr2_3:10188212-10188231 None:intergenic 30.0%
!! TTATCAAATGAGTGTTGCTT+AGG + chr2_3:10188278-10188297 Msa0277590:intron 30.0%
ATCTAATAACCTGGATCATT+AGG + chr2_3:10188347-10188366 Msa0277590:intron 30.0%
! TCAATATAGATTGGCTATCA+AGG - chr2_3:10188482-10188501 None:intergenic 30.0%
GATAGCCAATCTATATTGAT+TGG + chr2_3:10188483-10188502 Msa0277590:intron 30.0%
!!! CTCGCATATATTTAGTTTTG+AGG + chr2_3:10188547-10188566 Msa0277590:intron 30.0%
!! TTATTTTCGGGGTTTATATC+TGG + chr2_3:10188713-10188732 Msa0277590:intron 30.0%
! TTAACTTGACAAAACCTTGA+AGG + chr2_3:10188739-10188758 Msa0277590:intron 30.0%
CAAGTATGTTGAAAAACTTG+TGG + chr2_3:10189067-10189086 Msa0277590:intron 30.0%
TGTTGAAAAACTTGTGGAAA+TGG + chr2_3:10189073-10189092 Msa0277590:intron 30.0%
GCACAACAAAGATGAAAATT+TGG + chr2_3:10189301-10189320 Msa0277590:intron 30.0%
GATCTTGAAATGCATCTTAA+GGG + chr2_3:10189387-10189406 Msa0277590:intron 30.0%
! ATGATTTTCAGCATCAAACT+TGG + chr2_3:10189518-10189537 Msa0277590:intron 30.0%
TGAGCAACAATTATACCAAT+AGG - chr2_3:10189812-10189831 None:intergenic 30.0%
!!! CCAAGATAGAACTTTTTTAG+GGG - chr2_3:10190068-10190087 None:intergenic 30.0%
!!! GACCAAGATAGAACTTTTTT+AGG - chr2_3:10190070-10190089 None:intergenic 30.0%
! CTTAATCTAAGATATACTGG+TGG - chr2_3:10190115-10190134 None:intergenic 30.0%
TGATCAGATTAGTAACAAGA+AGG - chr2_3:10190243-10190262 None:intergenic 30.0%
! TCTGATCAACATTTTTCTGA+TGG + chr2_3:10190255-10190274 Msa0277590:five_prime_UTR 30.0%
TCTCATAAAAAACACTTCAC+TGG + chr2_3:10190294-10190313 Msa0277590:intron 30.0%
TGTAAGACTCAAACACAAAA+GGG - chr2_3:10190343-10190362 None:intergenic 30.0%
TTGTAAGACTCAAACACAAA+AGG - chr2_3:10190344-10190363 None:intergenic 30.0%
! AGAATTTTCAGAACGATCAA+TGG - chr2_3:10190475-10190494 None:intergenic 30.0%
!! TCTTTGAAATTCTAGAAGAG+GGG + chr2_3:10190541-10190560 Msa0277590:intron 30.0%
TTCCTGTTAATTGTAACAAG+TGG + chr2_3:10190735-10190754 Msa0277590:intron 30.0%
!! AAGAAGTGCTCTATACAATA+TGG - chr2_3:10190957-10190976 None:intergenic 30.0%
TTTATGGAAGTAAGAAACTG+TGG - chr2_3:10191080-10191099 None:intergenic 30.0%
!!! TCATGTTGTTTTGTTTCCAT+GGG + chr2_3:10191273-10191292 Msa0277590:exon 30.0%
TGATACTAACCAGAACATAT+TGG - chr2_3:10191387-10191406 None:intergenic 30.0%
!!! TCTCTATTTTAGGTTGAACA+TGG - chr2_3:10191484-10191503 None:intergenic 30.0%
! CTTGAACATGATAATGCAAT+AGG + chr2_3:10191559-10191578 Msa0277590:intron 30.0%
CACAATATTAATGTCTCAAG+AGG - chr2_3:10191615-10191634 None:intergenic 30.0%
AGAAATCTCAAATAGCATGA+AGG - chr2_3:10191691-10191710 None:intergenic 30.0%
!! CAGATTTTGATGAGAGATAA+TGG - chr2_3:10191744-10191763 None:intergenic 30.0%
CATTATCTCTCATCAAAATC+TGG + chr2_3:10191742-10191761 Msa0277590:intron 30.0%
!!! CCTCCTATGTTATTTTACTA+GGG + chr2_3:10191873-10191892 Msa0277590:intron 30.0%
GTACCCTAGTAAAATAACAT+AGG - chr2_3:10191879-10191898 None:intergenic 30.0%
!!! TTTTACTAGGGTACTGAAAA+TGG + chr2_3:10191885-10191904 Msa0277590:intron 30.0%
!! TAATCAGAGCTTGCTATATT+TGG + chr2_3:10192003-10192022 Msa0277590:intron 30.0%
TACAAGTATGGTAACTAGTT+AGG - chr2_3:10192414-10192433 None:intergenic 30.0%
AGAGGTAAACTATACAAGTA+TGG - chr2_3:10192426-10192445 None:intergenic 30.0%
! CTCTTTCTCATTTCTTTTGT+GGG + chr2_3:10192442-10192461 Msa0277590:intron 30.0%
!!! AATGATTTTTTAAGAGGTGC+TGG + chr2_3:10192542-10192561 Msa0277590:intron 30.0%
!!! TGTATTTTGATCAATTTGGC+GGG - chr2_3:10192601-10192620 None:intergenic 30.0%
TCTCGATTTCTCAATAGAAA+TGG - chr2_3:10192835-10192854 None:intergenic 30.0%
ATTTCTATTGAGAAATCGAG+AGG + chr2_3:10192834-10192853 Msa0277590:intron 30.0%
TTTAAATAAATGGCAGGTCA+TGG - chr2_3:10193415-10193434 None:intergenic 30.0%
!!! TATTATCCGTTGTCATTTTC+AGG + chr2_3:10193636-10193655 Msa0277590:intron 30.0%
ATCTTTCCTGAAAATGACAA+CGG - chr2_3:10193645-10193664 None:intergenic 30.0%
!!! CTTGCTTTATTTTCTGTTTC+AGG + chr2_3:10193683-10193702 Msa0277590:intron 30.0%
TTGTACTTGAAGATAACAAG+GGG + chr2_3:10193708-10193727 Msa0277590:CDS 30.0%
AGAGAACCAAATATTGTACT+AGG + chr2_3:10193801-10193820 Msa0277590:CDS 30.0%
TATGCACCTAGTACAATATT+TGG - chr2_3:10193810-10193829 None:intergenic 30.0%
TAAGTTCACAAGGTGAAAAT+GGG - chr2_3:10194042-10194061 None:intergenic 30.0%
TTAAGTTCACAAGGTGAAAA+TGG - chr2_3:10194043-10194062 None:intergenic 30.0%
TGTTTCTTGTCAATGTACTT+GGG - chr2_3:10194111-10194130 None:intergenic 30.0%
ATGTTTCTTGTCAATGTACT+TGG - chr2_3:10194112-10194131 None:intergenic 30.0%
AAAATTCCCTTTCTCCAGAA+TGG + chr2_3:10187849-10187868 Msa0277590:five_prime_UTR 35.0%
! GTATATTCCATTCTGGAGAA+AGG - chr2_3:10187859-10187878 None:intergenic 35.0%
TGAGGAGAGAATGAAGAAAA+CGG - chr2_3:10187916-10187935 None:intergenic 35.0%
AGAAGAGGAAGAATAAACGA+GGG - chr2_3:10188057-10188076 None:intergenic 35.0%
GATAAACCTTACATCATCGA+AGG - chr2_3:10188263-10188282 None:intergenic 35.0%
! ATGTTTTCTCCTAATGATCC+AGG - chr2_3:10188359-10188378 None:intergenic 35.0%
TTATTTGATGCAGAAGCAGA+AGG - chr2_3:10188983-10189002 None:intergenic 35.0%
TTCTGCTTCTGCATCAAATA+AGG + chr2_3:10188982-10189001 Msa0277590:five_prime_UTR 35.0%
AAATAAGGATGCTTTAACGG+TGG + chr2_3:10188997-10189016 Msa0277590:five_prime_UTR 35.0%
GGATCTTGAAATGCATCTTA+AGG + chr2_3:10189386-10189405 Msa0277590:intron 35.0%
TTGAAATGCATCTTAAGGGT+TGG + chr2_3:10189391-10189410 Msa0277590:intron 35.0%
! ACTTGGCATTTTCATCACTA+TGG + chr2_3:10189535-10189554 Msa0277590:five_prime_UTR 35.0%
! CTTGGCATTTTCATCACTAT+GGG + chr2_3:10189536-10189555 Msa0277590:five_prime_UTR 35.0%
! TTGGCATTTTCATCACTATG+GGG + chr2_3:10189537-10189556 Msa0277590:five_prime_UTR 35.0%
ATCACTATGGGGCTTATAAT+CGG + chr2_3:10189548-10189567 Msa0277590:five_prime_UTR 35.0%
TATATGTAGATTGGTGTGTG+TGG + chr2_3:10189588-10189607 Msa0277590:five_prime_UTR 35.0%
GTCAGGTAAAAAGGTGATAA+CGG - chr2_3:10189629-10189648 None:intergenic 35.0%
TGGCTGATATAAGAAATGGA+CGG - chr2_3:10189652-10189671 None:intergenic 35.0%
TCCATGTTATCAAGCAACAA+TGG + chr2_3:10189729-10189748 Msa0277590:five_prime_UTR 35.0%
!!! CTTTTCAAGTGATGTCTAAG+AGG - chr2_3:10189755-10189774 None:intergenic 35.0%
CTCTTAGACATCACTTGAAA+AGG + chr2_3:10189753-10189772 Msa0277590:five_prime_UTR 35.0%
TTAGACATCACTTGAAAAGG+TGG + chr2_3:10189756-10189775 Msa0277590:five_prime_UTR 35.0%
AAAAATAAACCACCCAACGT+GGG - chr2_3:10189785-10189804 None:intergenic 35.0%
AAAAAATAAACCACCCAACG+TGG - chr2_3:10189786-10189805 None:intergenic 35.0%
CACTTCTATAGATGAGGTAT+CGG - chr2_3:10189843-10189862 None:intergenic 35.0%
TAAACCTCACCAAGAATCAT+TGG + chr2_3:10189921-10189940 Msa0277590:five_prime_UTR 35.0%
!!! AGCATTGGTAGAAGTTTTCT+CGG + chr2_3:10189955-10189974 Msa0277590:five_prime_UTR 35.0%
CCCCTAAAAAAGTTCTATCT+TGG + chr2_3:10190065-10190084 Msa0277590:intron 35.0%
! AATCTAAGATATACTGGTGG+TGG - chr2_3:10190112-10190131 None:intergenic 35.0%
! AAGAAGGTATACATGCCATA+AGG - chr2_3:10190227-10190246 None:intergenic 35.0%
GTAAGACTCAAACACAAAAG+GGG - chr2_3:10190342-10190361 None:intergenic 35.0%
! CTCAATGTTAGGAGTGTAAT+AGG + chr2_3:10190496-10190515 Msa0277590:intron 35.0%
CTAGTAGTAATATGTCAGCA+GGG - chr2_3:10190644-10190663 None:intergenic 35.0%
TCTAGTAGTAATATGTCAGC+AGG - chr2_3:10190645-10190664 None:intergenic 35.0%
! CTCCACTTGTTACAATTAAC+AGG - chr2_3:10190740-10190759 None:intergenic 35.0%
TTAATTGTAACAAGTGGAGC+CGG + chr2_3:10190741-10190760 Msa0277590:intron 35.0%
GGAGGAGAATGATTAGAAAA+GGG + chr2_3:10190847-10190866 Msa0277590:intron 35.0%
GAGGAGAATGATTAGAAAAG+GGG + chr2_3:10190848-10190867 Msa0277590:intron 35.0%
AGGAGAATGATTAGAAAAGG+GGG + chr2_3:10190849-10190868 Msa0277590:intron 35.0%
ATAGGGGATATTGTGGAATT+AGG + chr2_3:10190882-10190901 Msa0277590:intron 35.0%
GCAAACAGAAGAAATGACTA+TGG - chr2_3:10190983-10191002 None:intergenic 35.0%
ATAACTCTCTCAAACAGAGA+AGG - chr2_3:10191044-10191063 None:intergenic 35.0%
GCATGTAAGTAAAGAAGAGA+GGG - chr2_3:10191187-10191206 None:intergenic 35.0%
TGCATGTAAGTAAAGAAGAG+AGG - chr2_3:10191188-10191207 None:intergenic 35.0%
TCTCTTCTTTACTTACATGC+AGG + chr2_3:10191187-10191206 Msa0277590:five_prime_UTR 35.0%
AATATCGTCCCAAATACACA+AGG - chr2_3:10191239-10191258 None:intergenic 35.0%
CATGGAAACAAAACAACATG+AGG - chr2_3:10191274-10191293 None:intergenic 35.0%
!!! CTCATGTTGTTTTGTTTCCA+TGG + chr2_3:10191272-10191291 Msa0277590:exon 35.0%
TAATTTAACACCATGTCCCA+TGG - chr2_3:10191292-10191311 None:intergenic 35.0%
AAATTAGCAGATGCTCTTGA+TGG + chr2_3:10191306-10191325 Msa0277590:CDS 35.0%
!!! ATTGCTGCATTGGCTTTTAT+TGG + chr2_3:10191342-10191361 Msa0277590:CDS 35.0%
!!! TTTTAGGTTGAACATGGAAC+TGG - chr2_3:10191478-10191497 None:intergenic 35.0%
CATTATCATGTTCAAGTGCA+AGG - chr2_3:10191555-10191574 None:intergenic 35.0%
AAAGCTCAACATGAAATGTG+GGG - chr2_3:10191650-10191669 None:intergenic 35.0%
CAAAGCTCAACATGAAATGT+GGG - chr2_3:10191651-10191670 None:intergenic 35.0%
ACAAAGCTCAACATGAAATG+TGG - chr2_3:10191652-10191671 None:intergenic 35.0%
! TTGATGAGAGATAATGGTCA+AGG - chr2_3:10191738-10191757 None:intergenic 35.0%
!!! GCCTCCTATGTTATTTTACT+AGG + chr2_3:10191872-10191891 Msa0277590:intron 35.0%
CCCTAGTAAAATAACATAGG+AGG - chr2_3:10191876-10191895 None:intergenic 35.0%
! TGCTATATTTGGAGCTTCAA+TGG + chr2_3:10192014-10192033 Msa0277590:CDS 35.0%
! TATATTTGGAGCTTCAATGG+CGG + chr2_3:10192017-10192036 Msa0277590:CDS 35.0%
!!! TCTGTTTTTATGGGTAAGAC+AGG + chr2_3:10192081-10192100 Msa0277590:CDS 35.0%
ATTCCAGAGGAAATTAGTAG+CGG - chr2_3:10192165-10192184 None:intergenic 35.0%
CTCAACTATGAAAATTCCAG+AGG - chr2_3:10192178-10192197 None:intergenic 35.0%
GTCGTCATTAGTTATTCTTC+AGG + chr2_3:10192197-10192216 Msa0277590:CDS 35.0%
!! TTATGGAAGCATTACAAGCA+TGG - chr2_3:10192229-10192248 None:intergenic 35.0%
CTTTGAGCACATTTCTCAAA+TGG - chr2_3:10192309-10192328 None:intergenic 35.0%
CATTTGAGAAATGTGCTCAA+AGG + chr2_3:10192307-10192326 Msa0277590:intron 35.0%
CCACAAAAGAAATGAGAAAG+AGG - chr2_3:10192444-10192463 None:intergenic 35.0%
! CCTCTTTCTCATTTCTTTTG+TGG + chr2_3:10192441-10192460 Msa0277590:intron 35.0%
!!! GTATTTTGATCAATTTGGCG+GGG - chr2_3:10192600-10192619 None:intergenic 35.0%
TGAATGAATGAGAATAGGGA+TGG + chr2_3:10192625-10192644 Msa0277590:intron 35.0%
GAATGAATGAGAATAGGGAT+GGG + chr2_3:10192626-10192645 Msa0277590:intron 35.0%
ATTATACTTGTGCTACCTTC+CGG + chr2_3:10192666-10192685 Msa0277590:intron 35.0%
AGGATTCTTATCCATCGATA+GGG + chr2_3:10192854-10192873 Msa0277590:intron 35.0%
TTAGAAAGAGAGATCAGAAC+AGG + chr2_3:10193114-10193133 Msa0277590:intron 35.0%
ACCATATAGGGATGTCAATA+AGG - chr2_3:10193334-10193353 None:intergenic 35.0%
TGACATCCCTATATGGTTAT+TGG + chr2_3:10193337-10193356 Msa0277590:intron 35.0%
ATCCCTATATGGTTATTGGT+TGG + chr2_3:10193341-10193360 Msa0277590:intron 35.0%
CACCAACCAATAACCATATA+GGG - chr2_3:10193346-10193365 None:intergenic 35.0%
ACACCAACCAATAACCATAT+AGG - chr2_3:10193347-10193366 None:intergenic 35.0%
! TTGGTTGGTGTTTGAACATT+AGG + chr2_3:10193356-10193375 Msa0277590:intron 35.0%
TGAGTATTACGAGTAACAGT+AGG + chr2_3:10193524-10193543 Msa0277590:intron 35.0%
! AAGATAACAAGGGGTTTTCT+GGG + chr2_3:10193717-10193736 Msa0277590:CDS 35.0%
AACTTCTCATACGGATATGT+TGG + chr2_3:10193907-10193926 Msa0277590:intron 35.0%
TGAAACTTCTCATACTTACC+TGG + chr2_3:10193962-10193981 Msa0277590:three_prime_UTR 35.0%
CCAATCTTCTTAAGTTCACA+AGG - chr2_3:10194052-10194071 None:intergenic 35.0%
CCTTGTGAACTTAAGAAGAT+TGG + chr2_3:10194049-10194068 Msa0277590:three_prime_UTR 35.0%
AAGACAAGAACGAGAAGTCA+TGG - chr2_3:10187961-10187980 None:intergenic 40.0%
GAGAAGAGGAAGAATAAACG+AGG - chr2_3:10188058-10188077 None:intergenic 40.0%
TTATTCTTCCTCTTCTCGCT+TGG + chr2_3:10188061-10188080 Msa0277590:five_prime_UTR 40.0%
GAAGAAGAATACCTTCACGA+TGG - chr2_3:10188093-10188112 None:intergenic 40.0%
TATTATCTTGCGTGAACGTG+AGG + chr2_3:10188144-10188163 Msa0277590:intron 40.0%
! GTTCGACGAAATGTTTCTAC+TGG + chr2_3:10188235-10188254 Msa0277590:five_prime_UTR 40.0%
! ATTTTCCGCTACTCGATGAT+TGG + chr2_3:10188864-10188883 Msa0277590:five_prime_UTR 40.0%
TTTACCATGCTTTGCCTCTA+AGG + chr2_3:10189198-10189217 Msa0277590:intron 40.0%
AATTCCTTAGAGGCAAAGCA+TGG - chr2_3:10189205-10189224 None:intergenic 40.0%
ATATAAGAAATGGACGGGTC+AGG - chr2_3:10189646-10189665 None:intergenic 40.0%
GGCTGATATAAGAAATGGAC+GGG - chr2_3:10189651-10189670 None:intergenic 40.0%
!!! GCCATTTTGGTTTCTTTTGC+TGG + chr2_3:10189668-10189687 Msa0277590:five_prime_UTR 40.0%
GCCAGCAAAAGAAACCAAAA+TGG - chr2_3:10189672-10189691 None:intergenic 40.0%
! GCCATTGTTGCTTGATAACA+TGG - chr2_3:10189733-10189752 None:intergenic 40.0%
!! ACCTCATCTATAGAAGTGTC+TGG + chr2_3:10189845-10189864 Msa0277590:five_prime_UTR 40.0%
!! CCTCATCTATAGAAGTGTCT+GGG + chr2_3:10189846-10189865 Msa0277590:five_prime_UTR 40.0%
!! CTCATCTATAGAAGTGTCTG+GGG + chr2_3:10189847-10189866 Msa0277590:five_prime_UTR 40.0%
ACAATTGCATTTGCAGCAGT+CGG + chr2_3:10189881-10189900 Msa0277590:five_prime_UTR 40.0%
TAAACCCCTCCAATGATTCT+TGG - chr2_3:10189933-10189952 None:intergenic 40.0%
GAGAAAACTTCTACCAATGC+TGG - chr2_3:10189956-10189975 None:intergenic 40.0%
! ATTGGTAGAAGTTTTCTCGG+AGG + chr2_3:10189958-10189977 Msa0277590:five_prime_UTR 40.0%
AGGGCATGTGTTAAAGGATT+GGG - chr2_3:10190620-10190639 None:intergenic 40.0%
TAGGGCATGTGTTAAAGGAT+TGG - chr2_3:10190621-10190640 None:intergenic 40.0%
AGTAATATGTCAGCAGGGTA+GGG - chr2_3:10190639-10190658 None:intergenic 40.0%
TAGTAATATGTCAGCAGGGT+AGG - chr2_3:10190640-10190659 None:intergenic 40.0%
!! CTGAAACGTTGTAGTCTTGT+TGG + chr2_3:10190694-10190713 Msa0277590:intron 40.0%
!! AAAAGAGGGAATGGATTGAG+AGG + chr2_3:10190825-10190844 Msa0277590:intron 40.0%
!! AAAGAGGGAATGGATTGAGA+GGG + chr2_3:10190826-10190845 Msa0277590:intron 40.0%
GGGAGGAGAATGATTAGAAA+AGG + chr2_3:10190846-10190865 Msa0277590:intron 40.0%
GGAGAATGATTAGAAAAGGG+GGG + chr2_3:10190850-10190869 Msa0277590:intron 40.0%
GAGAATGATTAGAAAAGGGG+GGG + chr2_3:10190851-10190870 Msa0277590:intron 40.0%
GATCAGAATAGGGGATATTG+TGG + chr2_3:10190875-10190894 Msa0277590:intron 40.0%
AACAACATGAGGTCAAGAGT+TGG - chr2_3:10191263-10191282 None:intergenic 40.0%
!!! TGTTTTGTTTCCATGGGACA+TGG + chr2_3:10191279-10191298 Msa0277590:exon 40.0%
GCTGTACTTCCAATATGTTC+TGG + chr2_3:10191375-10191394 Msa0277590:CDS 40.0%
CCAGTTGTCACAAGTTAGAA+GGG + chr2_3:10191806-10191825 Msa0277590:intron 40.0%
CAGTTGTCACAAGTTAGAAG+GGG + chr2_3:10191807-10191826 Msa0277590:intron 40.0%
! ATATTTGGAGCTTCAATGGC+GGG + chr2_3:10192018-10192037 Msa0277590:CDS 40.0%
TTCCAGAGGAAATTAGTAGC+GGG - chr2_3:10192164-10192183 None:intergenic 40.0%
GAGGATTCTTATCCATCGAT+AGG + chr2_3:10192853-10192872 Msa0277590:intron 40.0%
GGGGAAAAATTCCTTGACTT+TGG - chr2_3:10192935-10192954 None:intergenic 40.0%
! TCAAGGAATTTTTCCCCACA+GGG + chr2_3:10192938-10192957 Msa0277590:intron 40.0%
TGAGAGCTGTTAAGAGTTCA+AGG - chr2_3:10193144-10193163 None:intergenic 40.0%
TAAAGATGAGACGTTGAGAG+CGG - chr2_3:10193195-10193214 None:intergenic 40.0%
CTCTCAACGTCTCATCTTTA+TGG + chr2_3:10193195-10193214 Msa0277590:intron 40.0%
AACGTCTCATCTTTATGGTG+TGG + chr2_3:10193200-10193219 Msa0277590:intron 40.0%
ATGAGGAAAATAATCCCCCA+TGG + chr2_3:10193257-10193276 Msa0277590:intron 40.0%
ATAGGGATGTCAATAAGGCA+GGG - chr2_3:10193329-10193348 None:intergenic 40.0%
TATAGGGATGTCAATAAGGC+AGG - chr2_3:10193330-10193349 None:intergenic 40.0%
! GCCTTATTGACATCCCTATA+TGG + chr2_3:10193330-10193349 Msa0277590:intron 40.0%
!! AGGTATCGAAGGACAGATTA+GGG - chr2_3:10193461-10193480 None:intergenic 40.0%
!! TAGGTATCGAAGGACAGATT+AGG - chr2_3:10193462-10193481 None:intergenic 40.0%
ATCTGTCCTTCGATACCTAA+TGG + chr2_3:10193463-10193482 Msa0277590:intron 40.0%
!! TAAGAGCCATTAGGTATCGA+AGG - chr2_3:10193472-10193491 None:intergenic 40.0%
! TGTACTTGCTAAGAGCCATT+AGG - chr2_3:10193481-10193500 None:intergenic 40.0%
AACAGAGTGTACTTGTTCTG+TGG + chr2_3:10193592-10193611 Msa0277590:intron 40.0%
! GAAGATAACAAGGGGTTTTC+TGG + chr2_3:10193716-10193735 Msa0277590:CDS 40.0%
!! TCATCTGTATTGGCTTTGCT+TGG + chr2_3:10193837-10193856 Msa0277590:CDS 40.0%
GTCACGTGAAACTTCTCATA+CGG + chr2_3:10193898-10193917 Msa0277590:three_prime_UTR 40.0%
! TGTTCTAGACCAACATAACG+AGG - chr2_3:10193991-10194010 None:intergenic 40.0%
AAAACAAACCCTCTTGTGGT+TGG - chr2_3:10194014-10194033 None:intergenic 40.0%
CAATGTACTTGGGTTCTCAA+TGG - chr2_3:10194101-10194120 None:intergenic 40.0%
AGAGTGAGAGAGTAGATCTG+AGG - chr2_3:10187934-10187953 None:intergenic 45.0%
AAGAAGAAGAAGGGAGAGAG+AGG - chr2_3:10188028-10188047 None:intergenic 45.0%
GGGAAGAGGAAGAAGAAGAA+GGG - chr2_3:10188037-10188056 None:intergenic 45.0%
AGGGAAGAGGAAGAAGAAGA+AGG - chr2_3:10188038-10188057 None:intergenic 45.0%
GGAAGAATAAACGAGGGAAG+AGG - chr2_3:10188051-10188070 None:intergenic 45.0%
TGGTGACATCTTTCTTACCC+CGG + chr2_3:10188940-10188959 Msa0277590:five_prime_UTR 45.0%
CAAATCAACATCATGCACCG+GGG - chr2_3:10188960-10188979 None:intergenic 45.0%
GCAAATCAACATCATGCACC+GGG - chr2_3:10188961-10188980 None:intergenic 45.0%
GGCAAATCAACATCATGCAC+CGG - chr2_3:10188962-10188981 None:intergenic 45.0%
!! CTCATCGGCTTGTAACCATT+GGG + chr2_3:10189023-10189042 Msa0277590:five_prime_UTR 45.0%
AATGGACGGGTCAGGTAAAA+AGG - chr2_3:10189638-10189657 None:intergenic 45.0%
CCCAGACACTTCTATAGATG+AGG - chr2_3:10189849-10189868 None:intergenic 45.0%
ACCTCACCAAGAATCATTGG+AGG + chr2_3:10189924-10189943 Msa0277590:five_prime_UTR 45.0%
CCTCACCAAGAATCATTGGA+GGG + chr2_3:10189925-10189944 Msa0277590:five_prime_UTR 45.0%
CTCACCAAGAATCATTGGAG+GGG + chr2_3:10189926-10189945 Msa0277590:five_prime_UTR 45.0%
! GAAGTTTTCTCGGAGGTGAT+TGG + chr2_3:10189965-10189984 Msa0277590:intron 45.0%
GATACTACACAGGTAGCTGT+TGG + chr2_3:10190158-10190177 Msa0277590:intron 45.0%
!!! TTGGAGGGTGCTTTTCGTTT+TGG + chr2_3:10190177-10190196 Msa0277590:five_prime_UTR 45.0%
!! AGGGTGCTTTTCGTTTTGGT+TGG + chr2_3:10190181-10190200 Msa0277590:five_prime_UTR 45.0%
GCCAGCATATCTTCACCTTA+TGG + chr2_3:10190209-10190228 Msa0277590:five_prime_UTR 45.0%
GCCATAAGGTGAAGATATGC+TGG - chr2_3:10190213-10190232 None:intergenic 45.0%
GGGCATGTGTTAAAGGATTG+GGG - chr2_3:10190619-10190638 None:intergenic 45.0%
AGGGAATCCTGGAAAGAAGT+AGG + chr2_3:10190773-10190792 Msa0277590:intron 45.0%
GGGAATCCTGGAAAGAAGTA+GGG + chr2_3:10190774-10190793 Msa0277590:intron 45.0%
ATCCTGGAAAGAAGTAGGGA+AGG + chr2_3:10190778-10190797 Msa0277590:intron 45.0%
TCCTGGAAAGAAGTAGGGAA+GGG + chr2_3:10190779-10190798 Msa0277590:intron 45.0%
! CTTTTCCACATGTCCCCATT+GGG - chr2_3:10190810-10190829 None:intergenic 45.0%
! TCTTTTCCACATGTCCCCAT+TGG - chr2_3:10190811-10190830 None:intergenic 45.0%
AATGGGGACATGTGGAAAAG+AGG + chr2_3:10190810-10190829 Msa0277590:intron 45.0%
ATGGGGACATGTGGAAAAGA+GGG + chr2_3:10190811-10190830 Msa0277590:intron 45.0%
GACATGTGGAAAAGAGGGAA+TGG + chr2_3:10190816-10190835 Msa0277590:intron 45.0%
GGAATTAGGAGTCTTCCTCT+CGG + chr2_3:10190896-10190915 Msa0277590:intron 45.0%
AAGAAGAGAGGGCAAGTAAG+AGG - chr2_3:10191176-10191195 None:intergenic 45.0%
ACATTACTCCCACTACCACT+AGG + chr2_3:10191213-10191232 Msa0277590:five_prime_UTR 45.0%
! ACCACTAGGCCTTGTGTATT+TGG + chr2_3:10191227-10191246 Msa0277590:five_prime_UTR 45.0%
! CCACTAGGCCTTGTGTATTT+GGG + chr2_3:10191228-10191247 Msa0277590:five_prime_UTR 45.0%
GCCAGTTGTCACAAGTTAGA+AGG + chr2_3:10191805-10191824 Msa0277590:intron 45.0%
! CCCTTCTAACTTGTGACAAC+TGG - chr2_3:10191809-10191828 None:intergenic 45.0%
AAGACAGGATCTTTAGCCCT+TGG + chr2_3:10192096-10192115 Msa0277590:CDS 45.0%
TGCAGTTAATGCACCACCAA+GGG - chr2_3:10192115-10192134 None:intergenic 45.0%
TTGCAGTTAATGCACCACCA+AGG - chr2_3:10192116-10192135 None:intergenic 45.0%
! TGGTGGTGCATTAACTGCAA+TGG + chr2_3:10192116-10192135 Msa0277590:CDS 45.0%
TTCCCGCTACTAATTTCCTC+TGG + chr2_3:10192159-10192178 Msa0277590:CDS 45.0%
! TCTTTTGTGGGTTCTGTGTC+AGG + chr2_3:10192454-10192473 Msa0277590:intron 45.0%
ATTAAGGGCTCAGTTACCCA+AGG + chr2_3:10192732-10192751 Msa0277590:intron 45.0%
TCCATCGATAGGGATGTCAA+TGG + chr2_3:10192864-10192883 Msa0277590:intron 45.0%
CCATCGATAGGGATGTCAAT+GGG + chr2_3:10192865-10192884 Msa0277590:intron 45.0%
CATCGATAGGGATGTCAATG+GGG + chr2_3:10192866-10192885 Msa0277590:intron 45.0%
!! TTGACTTTGGAGCTCCAAAC+GGG - chr2_3:10192922-10192941 None:intergenic 45.0%
!! CTTGACTTTGGAGCTCCAAA+CGG - chr2_3:10192923-10192942 None:intergenic 45.0%
! GTCAAGGAATTTTTCCCCAC+AGG + chr2_3:10192937-10192956 Msa0277590:intron 45.0%
! GAATTTTTCCCCACAGGGAT+GGG + chr2_3:10192943-10192962 Msa0277590:intron 45.0%
! AATTTTTCCCCACAGGGATG+GGG + chr2_3:10192944-10192963 Msa0277590:intron 45.0%
GTCTCATCTTTATGGTGTGG+TGG + chr2_3:10193203-10193222 Msa0277590:intron 45.0%
TCATCTTTATGGTGTGGTGG+AGG + chr2_3:10193206-10193225 Msa0277590:intron 45.0%
! CATCTTTATGGTGTGGTGGA+GGG + chr2_3:10193207-10193226 Msa0277590:intron 45.0%
AGGAAAATAATCCCCCATGG+CGG + chr2_3:10193260-10193279 Msa0277590:intron 45.0%
! ATAACAAGGGGTTTTCTGGG+AGG + chr2_3:10193720-10193739 Msa0277590:CDS 45.0%
AAATGGAGGCGGCGATAAAA+AGG - chr2_3:10193771-10193790 None:intergenic 45.0%
!! TCTGTATTGGCTTTGCTTGG+CGG + chr2_3:10193840-10193859 Msa0277590:CDS 45.0%
ACCTGGTATCCTCGTTATGT+TGG + chr2_3:10193979-10193998 Msa0277590:three_prime_UTR 45.0%
ACCAACATAACGAGGATACC+AGG - chr2_3:10193983-10194002 None:intergenic 45.0%
! TCTAGAACACCAACCACAAG+AGG + chr2_3:10194002-10194021 Msa0277590:three_prime_UTR 45.0%
CTAGAACACCAACCACAAGA+GGG + chr2_3:10194003-10194022 Msa0277590:three_prime_UTR 45.0%
GCGTAAAACAAACCCTCTTG+TGG - chr2_3:10194018-10194037 None:intergenic 45.0%
!!! GAATTTATTTTAAAAATAAT+GGG + chr2_3:10189220-10189239 Msa0277590:intron 5.0%
GGCGCGAGTATATTCCATTC+TGG - chr2_3:10187866-10187885 None:intergenic 50.0%
AGAGACGGAGAGGGAGATTT+CGG - chr2_3:10187992-10188011 None:intergenic 50.0%
GAATACGAGAGAGACGGAGA+GGG - chr2_3:10188001-10188020 None:intergenic 50.0%
TGAATACGAGAGAGACGGAG+AGG - chr2_3:10188002-10188021 None:intergenic 50.0%
GGCGATGAATACGAGAGAGA+CGG - chr2_3:10188007-10188026 None:intergenic 50.0%
CTGGAGCCTTCGATGATGTA+AGG + chr2_3:10188254-10188273 Msa0277590:intron 50.0%
ATGACTCGCTAGAGCCTTCA+AGG - chr2_3:10188756-10188775 None:intergenic 50.0%
GGACTCCAATCATCGAGTAG+CGG - chr2_3:10188872-10188891 None:intergenic 50.0%
GCGTATGACGTACTCTCTTC+AGG - chr2_3:10188893-10188912 None:intergenic 50.0%
TCATACGCCTCATCCAGTGA+CGG + chr2_3:10188905-10188924 Msa0277590:five_prime_UTR 50.0%
ATCAAAGTCTTCGCCGTCAC+TGG - chr2_3:10188921-10188940 None:intergenic 50.0%
AGTGACGGCGAAGACTTTGA+TGG + chr2_3:10188920-10188939 Msa0277590:five_prime_UTR 50.0%
CTTTAACGGTGGCTGCTCAT+CGG + chr2_3:10189008-10189027 Msa0277590:five_prime_UTR 50.0%
!! GCTCATCGGCTTGTAACCAT+TGG + chr2_3:10189022-10189041 Msa0277590:five_prime_UTR 50.0%
!! ATCGGCTTGTAACCATTGGG+AGG + chr2_3:10189026-10189045 Msa0277590:five_prime_UTR 50.0%
! TCGGCTTGTAACCATTGGGA+GGG + chr2_3:10189027-10189046 Msa0277590:five_prime_UTR 50.0%
ATTCTTGTGTCCCCTCCCAA+TGG - chr2_3:10189041-10189060 None:intergenic 50.0%
GGAGGGGACACAAGAATCAT+AGG + chr2_3:10189044-10189063 Msa0277590:five_prime_UTR 50.0%
AAAAGGTGGACACCCACGTT+GGG + chr2_3:10189770-10189789 Msa0277590:five_prime_UTR 50.0%
CCCTCCAATGATTCTTGGTG+AGG - chr2_3:10189928-10189947 None:intergenic 50.0%
TTGGAGGGGTTTACCAGCAT+TGG + chr2_3:10189940-10189959 Msa0277590:five_prime_UTR 50.0%
ACTACACAGGTAGCTGTTGG+AGG + chr2_3:10190161-10190180 Msa0277590:intron 50.0%
CTACACAGGTAGCTGTTGGA+GGG + chr2_3:10190162-10190181 Msa0277590:intron 50.0%
CAGGGTAGGGCATGTGTTAA+AGG - chr2_3:10190626-10190645 None:intergenic 50.0%
TAACAAGTGGAGCCGGAAGA+AGG + chr2_3:10190748-10190767 Msa0277590:intron 50.0%
AACAAGTGGAGCCGGAAGAA+GGG + chr2_3:10190749-10190768 Msa0277590:intron 50.0%
AGGATTCCCTTCCCTTCTTC+CGG - chr2_3:10190763-10190782 None:intergenic 50.0%
TCCCTTCCCTACTTCTTTCC+AGG - chr2_3:10190783-10190802 None:intergenic 50.0%
TAGGGAAGGGACTAACCCAA+TGG + chr2_3:10190792-10190811 Msa0277590:intron 50.0%
AGGGAAGGGACTAACCCAAT+GGG + chr2_3:10190793-10190812 Msa0277590:intron 50.0%
ACTAACCCAATGGGGACATG+TGG + chr2_3:10190802-10190821 Msa0277590:intron 50.0%
AAAGGGGGGGTGATCAGAAT+AGG + chr2_3:10190864-10190883 Msa0277590:intron 50.0%
AAGGGGGGGTGATCAGAATA+GGG + chr2_3:10190865-10190884 Msa0277590:intron 50.0%
AAAATGGAACCCTGACCGAG+AGG - chr2_3:10190914-10190933 None:intergenic 50.0%
ACACAAGGCCTAGTGGTAGT+GGG - chr2_3:10191224-10191243 None:intergenic 50.0%
TACACAAGGCCTAGTGGTAG+TGG - chr2_3:10191225-10191244 None:intergenic 50.0%
CCCAAATACACAAGGCCTAG+TGG - chr2_3:10191231-10191250 None:intergenic 50.0%
! TCAATGGCGGGATCTTGTGT+TGG + chr2_3:10192030-10192049 Msa0277590:CDS 50.0%
ACAGGATCTTTAGCCCTTGG+TGG + chr2_3:10192099-10192118 Msa0277590:CDS 50.0%
ACTGCAATGGCTGCATGTAC+TGG + chr2_3:10192129-10192148 Msa0277590:CDS 50.0%
CATGCACTCGTCGTAATGTG+TGG - chr2_3:10192383-10192402 None:intergenic 50.0%
TACCTTCCGGTACCTTGGTA+AGG + chr2_3:10192679-10192698 Msa0277590:intron 50.0%
CCTACTCCTTACCAAGGTAC+CGG - chr2_3:10192688-10192707 None:intergenic 50.0%
CGGTACCTTGGTAAGGAGTA+GGG + chr2_3:10192686-10192705 Msa0277590:intron 50.0%
CCCATTGACATCCCTATCGA+TGG - chr2_3:10192868-10192887 None:intergenic 50.0%
ACTTGTCAGTGTAGACTCCC+CGG + chr2_3:10192889-10192908 Msa0277590:intron 50.0%
!! TGACTTTGGAGCTCCAAACG+GGG - chr2_3:10192921-10192940 None:intergenic 50.0%
! CGTTTGGAGCTCCAAAGTCA+AGG + chr2_3:10192921-10192940 Msa0277590:intron 50.0%
! GGAATTTTTCCCCACAGGGA+TGG + chr2_3:10192942-10192961 Msa0277590:intron 50.0%
!!! AGTATTTTGGTTGGGGGCGA+GGG - chr2_3:10193017-10193036 None:intergenic 50.0%
!!! TAGTATTTTGGTTGGGGGCG+AGG - chr2_3:10193018-10193037 None:intergenic 50.0%
! GTGTGGTGGAGGGATTTGAT+GGG + chr2_3:10193217-10193236 Msa0277590:intron 50.0%
! TGTGGTGGAGGGATTTGATG+GGG + chr2_3:10193218-10193237 Msa0277590:intron 50.0%
AGGGATTTGATGGGGATCTG+TGG + chr2_3:10193226-10193245 Msa0277590:intron 50.0%
GGGATTTGATGGGGATCTGT+GGG + chr2_3:10193227-10193246 Msa0277590:intron 50.0%
GGATTTGATGGGGATCTGTG+GGG + chr2_3:10193228-10193247 Msa0277590:intron 50.0%
GGAAAATAATCCCCCATGGC+GGG + chr2_3:10193261-10193280 Msa0277590:intron 50.0%
GAAAATAATCCCCCATGGCG+GGG + chr2_3:10193262-10193281 Msa0277590:intron 50.0%
GTTCTCTGAACCTGCGCAAA+TGG - chr2_3:10193788-10193807 None:intergenic 50.0%
! GCTTTGCTTGGCGGATATGT+TGG + chr2_3:10193849-10193868 Msa0277590:CDS 50.0%
CTTGGATTGCGCCATCGTGA+AGG + chr2_3:10188079-10188098 Msa0277590:five_prime_UTR 55.0%
CGGCTTGTAACCATTGGGAG+GGG + chr2_3:10189028-10189047 Msa0277590:five_prime_UTR 55.0%
GAAAAGGTGGACACCCACGT+TGG + chr2_3:10189769-10189788 Msa0277590:five_prime_UTR 55.0%
GGAAGAAGGGAAGGGAATCC+TGG + chr2_3:10190762-10190781 Msa0277590:intron 55.0%
GGGAAGGGACTAACCCAATG+GGG + chr2_3:10190794-10190813 Msa0277590:intron 55.0%
!! GAGGGAATGGATTGAGAGGG+AGG + chr2_3:10190829-10190848 Msa0277590:intron 55.0%
AGGGGGGGTGATCAGAATAG+GGG + chr2_3:10190866-10190885 Msa0277590:intron 55.0%
TAGGAGTCTTCCTCTCGGTC+AGG + chr2_3:10190901-10190920 Msa0277590:intron 55.0%
AGGAGTCTTCCTCTCGGTCA+GGG + chr2_3:10190902-10190921 Msa0277590:intron 55.0%
!! GATGCTCTTGATGGACTCGC+TGG + chr2_3:10191315-10191334 Msa0277590:CDS 55.0%
TGTGCTACCTTCCGGTACCT+TGG + chr2_3:10192674-10192693 Msa0277590:intron 55.0%
!! CTCCTTACCAAGGTACCGGA+AGG - chr2_3:10192684-10192703 None:intergenic 55.0%
CCGGTACCTTGGTAAGGAGT+AGG + chr2_3:10192685-10192704 Msa0277590:intron 55.0%
AGGGTCCCTACTCCTTACCA+AGG - chr2_3:10192694-10192713 None:intergenic 55.0%
GGGCTCAGTTACCCAAGGTT+TGG + chr2_3:10192737-10192756 Msa0277590:intron 55.0%
TCCAAACGGGGCAAAAACCG+GGG - chr2_3:10192909-10192928 None:intergenic 55.0%
CTCCAAACGGGGCAAAAACC+GGG - chr2_3:10192910-10192929 None:intergenic 55.0%
GCTCCAAACGGGGCAAAAAC+CGG - chr2_3:10192911-10192930 None:intergenic 55.0%
TGCTCCCCCATGAGAACTTC+AGG + chr2_3:10192972-10192991 Msa0277590:intron 55.0%
GCTCCCCCATGAGAACTTCA+GGG + chr2_3:10192973-10192992 Msa0277590:intron 55.0%
CGTCCCTGAAGTTCTCATGG+GGG - chr2_3:10192979-10192998 None:intergenic 55.0%
CCGTCCCTGAAGTTCTCATG+GGG - chr2_3:10192980-10192999 None:intergenic 55.0%
CCCCATGAGAACTTCAGGGA+CGG + chr2_3:10192977-10192996 Msa0277590:intron 55.0%
CCCGTCCCTGAAGTTCTCAT+GGG - chr2_3:10192981-10193000 None:intergenic 55.0%
CCCATGAGAACTTCAGGGAC+GGG + chr2_3:10192978-10192997 Msa0277590:intron 55.0%
CCATGAGAACTTCAGGGACG+GGG + chr2_3:10192979-10192998 Msa0277590:intron 55.0%
AGAACTTCAGGGACGGGGAT+CGG + chr2_3:10192984-10193003 Msa0277590:intron 55.0%
TGAGACGTTGAGAGCGGTGA+AGG - chr2_3:10193189-10193208 None:intergenic 55.0%
! GGTGTGGTGGAGGGATTTGA+TGG + chr2_3:10193216-10193235 Msa0277590:intron 55.0%
TTGATGGGGATCTGTGGGGA+CGG + chr2_3:10193232-10193251 Msa0277590:intron 55.0%
TCAATCTGTTCCCCGCCATG+GGG - chr2_3:10193275-10193294 None:intergenic 55.0%
CTCAATCTGTTCCCCGCCAT+GGG - chr2_3:10193276-10193295 None:intergenic 55.0%
AACAGATTGAGGCACGGGGT+GGG + chr2_3:10193285-10193304 Msa0277590:intron 55.0%
GGATGTCAATAAGGCAGGGC+GGG - chr2_3:10193325-10193344 None:intergenic 55.0%
GGGATGTCAATAAGGCAGGG+CGG - chr2_3:10193326-10193345 None:intergenic 55.0%
!! GGGGTTTTCTGGGAGGAAGT+TGG + chr2_3:10193727-10193746 Msa0277590:CDS 55.0%
TGGAGGCGGCGATAAAAAGG+TGG - chr2_3:10193768-10193787 None:intergenic 55.0%
TGAACCTGCGCAAATGGAGG+CGG - chr2_3:10193782-10193801 None:intergenic 55.0%
CTCTGAACCTGCGCAAATGG+AGG - chr2_3:10193785-10193804 None:intergenic 55.0%
GACGGAGAGGGAGATTTCGG+TGG - chr2_3:10187989-10188008 None:intergenic 60.0%
GGCGCAATCCAAGCGAGAAG+AGG - chr2_3:10188072-10188091 None:intergenic 60.0%
GTCTTCGCCGTCACTGGATG+AGG - chr2_3:10188915-10188934 None:intergenic 60.0%
AGTGGAGCCGGAAGAAGGGA+AGG + chr2_3:10190753-10190772 Msa0277590:intron 60.0%
GTGGAGCCGGAAGAAGGGAA+GGG + chr2_3:10190754-10190773 Msa0277590:intron 60.0%
!! GCTCTTGATGGACTCGCTGG+AGG + chr2_3:10191318-10191337 Msa0277590:CDS 60.0%
!! CGCTGGAGGCATTGCTGCAT+TGG + chr2_3:10191332-10191351 Msa0277590:CDS 60.0%
! TCCCCGGTTTTTGCCCCGTT+TGG + chr2_3:10192905-10192924 Msa0277590:intron 60.0%
! TTTTCCCCACAGGGATGGGG+TGG + chr2_3:10192947-10192966 Msa0277590:intron 60.0%
CATTCCACCCCATCCCTGTG+GGG - chr2_3:10192954-10192973 None:intergenic 60.0%
GCATTCCACCCCATCCCTGT+GGG - chr2_3:10192955-10192974 None:intergenic 60.0%
AGCATTCCACCCCATCCCTG+TGG - chr2_3:10192956-10192975 None:intergenic 60.0%
CCCCGTCCCTGAAGTTCTCA+TGG - chr2_3:10192982-10193001 None:intergenic 60.0%
GAACTTCAGGGACGGGGATC+GGG + chr2_3:10192985-10193004 Msa0277590:intron 60.0%
AACTTCAGGGACGGGGATCG+GGG + chr2_3:10192986-10193005 Msa0277590:intron 60.0%
TGATGGGGATCTGTGGGGAC+GGG + chr2_3:10193233-10193252 Msa0277590:intron 60.0%
CAATCTGTTCCCCGCCATGG+GGG - chr2_3:10193274-10193293 None:intergenic 60.0%
CCTCAATCTGTTCCCCGCCA+TGG - chr2_3:10193277-10193296 None:intergenic 60.0%
! CCATGGCGGGGAACAGATTG+AGG + chr2_3:10193274-10193293 Msa0277590:intron 60.0%
GCGGGGAACAGATTGAGGCA+CGG + chr2_3:10193279-10193298 Msa0277590:intron 60.0%
CGGGGAACAGATTGAGGCAC+GGG + chr2_3:10193280-10193299 Msa0277590:intron 60.0%
GGGGAACAGATTGAGGCACG+GGG + chr2_3:10193281-10193300 Msa0277590:intron 60.0%
GAACAGATTGAGGCACGGGG+TGG + chr2_3:10193284-10193303 Msa0277590:intron 60.0%
ACAGATTGAGGCACGGGGTG+GGG + chr2_3:10193286-10193305 Msa0277590:intron 60.0%
AGGTGGACACCCACGTTGGG+TGG + chr2_3:10189773-10189792 Msa0277590:five_prime_UTR 65.0%
GATGGGGATCTGTGGGGACG+GGG + chr2_3:10193234-10193253 Msa0277590:intron 65.0%
GATCTGTGGGGACGGGGATG+AGG + chr2_3:10193240-10193259 Msa0277590:intron 65.0%
TTGAGGCACGGGGTGGGGAA+CGG + chr2_3:10193291-10193310 Msa0277590:intron 65.0%
ATCGCCGCCTCCATTTGCGC+AGG + chr2_3:10193775-10193794 Msa0277590:CDS 65.0%
TGAGGCACGGGGTGGGGAAC+GGG + chr2_3:10193292-10193311 Msa0277590:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 10187841 10194202 10187841 ID=Msa0277590;Name=Msa0277590
chr2_3 mRNA 10187841 10194202 10187841 ID=Msa0277590-mRNA-1;Parent=Msa0277590;Name=Msa0277590-mRNA-1;_AED=0.03;_eAED=0.03;_QI=1337|1|1|1|0.62|0.33|9|277|165
chr2_3 exon 10187841 10188100 10187841 ID=Msa0277590-mRNA-1:exon:4553;Parent=Msa0277590-mRNA-1
chr2_3 exon 10188199 10188270 10188199 ID=Msa0277590-mRNA-1:exon:4554;Parent=Msa0277590-mRNA-1
chr2_3 exon 10188854 10189065 10188854 ID=Msa0277590-mRNA-1:exon:4555;Parent=Msa0277590-mRNA-1
chr2_3 exon 10189529 10189979 10189529 ID=Msa0277590-mRNA-1:exon:4556;Parent=Msa0277590-mRNA-1
chr2_3 exon 10190170 10190276 10190170 ID=Msa0277590-mRNA-1:exon:4557;Parent=Msa0277590-mRNA-1
chr2_3 exon 10191056 10191396 10191056 ID=Msa0277590-mRNA-1:exon:4558;Parent=Msa0277590-mRNA-1
chr2_3 exon 10192010 10192218 10192010 ID=Msa0277590-mRNA-1:exon:4559;Parent=Msa0277590-mRNA-1
chr2_3 exon 10193705 10193918 10193705 ID=Msa0277590-mRNA-1:exon:4560;Parent=Msa0277590-mRNA-1
chr2_3 exon 10193957 10194202 10193957 ID=Msa0277590-mRNA-1:exon:4561;Parent=Msa0277590-mRNA-1
chr2_3 five_prime_UTR 10187841 10188100 10187841 ID=Msa0277590-mRNA-1:five_prime_utr;Parent=Msa0277590-mRNA-1
chr2_3 five_prime_UTR 10188199 10188270 10188199 ID=Msa0277590-mRNA-1:five_prime_utr;Parent=Msa0277590-mRNA-1
chr2_3 five_prime_UTR 10188854 10189065 10188854 ID=Msa0277590-mRNA-1:five_prime_utr;Parent=Msa0277590-mRNA-1
chr2_3 five_prime_UTR 10189529 10189979 10189529 ID=Msa0277590-mRNA-1:five_prime_utr;Parent=Msa0277590-mRNA-1
chr2_3 five_prime_UTR 10190170 10190276 10190170 ID=Msa0277590-mRNA-1:five_prime_utr;Parent=Msa0277590-mRNA-1
chr2_3 five_prime_UTR 10191056 10191290 10191056 ID=Msa0277590-mRNA-1:five_prime_utr;Parent=Msa0277590-mRNA-1
chr2_3 CDS 10191291 10191396 10191291 ID=Msa0277590-mRNA-1:cds;Parent=Msa0277590-mRNA-1
chr2_3 CDS 10192010 10192218 10192010 ID=Msa0277590-mRNA-1:cds;Parent=Msa0277590-mRNA-1
chr2_3 CDS 10193705 10193887 10193705 ID=Msa0277590-mRNA-1:cds;Parent=Msa0277590-mRNA-1
chr2_3 three_prime_UTR 10193888 10193918 10193888 ID=Msa0277590-mRNA-1:three_prime_utr;Parent=Msa0277590-mRNA-1
chr2_3 three_prime_UTR 10193957 10194202 10193957 ID=Msa0277590-mRNA-1:three_prime_utr;Parent=Msa0277590-mRNA-1
Gene Sequence

>Msa0277590

ATGGGACATGGTGTTAAATTAGCAGATGCTCTTGATGGACTCGCTGGAGGCATTGCTGCATTGGCTTTTATTGGAATGTCAATAGCTGTACTTCCAATATGTTCTGAGCTTGCTATATTTGGAGCTTCAATGGCGGGATCTTGTGTTGGATTTCTTCTACACAACAGATACAAAGCATCTGTTTTTATGGGTAAGACAGGATCTTTAGCCCTTGGTGGTGCATTAACTGCAATGGCTGCATGTACTGGAATGTTCTTCCCGCTACTAATTTCCTCTGGAATTTTCATAGTTGAGTCGTCATTAGTTATTCTTCAGGTATTGTACTTGAAGATAACAAGGGGTTTTCTGGGAGGAAGTTGGCACTTTTTGAGAATGCCACCTTTTTATCGCCGCCTCCATTTGCGCAGGTTCAGAGAACCAAATATTGTACTAGGTGCATATCTGATTTCATCTGTATTGGCTTTGCTTGGCGGATATGTTGGTCTTATTTCAGCATAA
Protein sequence

>Msa0277590

MGHGVKLADALDGLAGGIAALAFIGMSIAVLPICSELAIFGASMAGSCVGFLLHNRYKASVFMGKTGSLALGGALTAMAACTGMFFPLLISSGIFIVESSLVILQVLYLKITRGFLGGSWHFLRMPPFYRRLHLRRFREPNIVLGAYLISSVLALLGGYVGLISA*