Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278130 | AES64672.2 | 88.796 | 357 | 38 | 2 | 1 | 356 | 1 | 356 | 0.0 | 620 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278130 | sp|F4IW10|EFGM2_ARATH | 48.541 | 377 | 153 | 6 | 1 | 357 | 1 | 356 | 4.58e-117 | 359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278130 | G7IFS1 | 88.796 | 357 | 38 | 2 | 1 | 356 | 1 | 356 | 0.0 | 620 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0240420 | Msa0278130 | 0.871812 | 5.136018e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278130 | MtrunA17_Chr2g0291331 | 67.769 | 363 | 88 | 6 | 1 | 356 | 1 | 341 | 1.16e-165 | 472 |
| Msa0278130 | MtrunA17_Chr2g0291831 | 65.152 | 330 | 90 | 8 | 33 | 356 | 57 | 367 | 1.10e-139 | 406 |
| Msa0278130 | MtrunA17_Chr2g0291381 | 68.621 | 290 | 78 | 5 | 46 | 324 | 6 | 293 | 3.10e-134 | 385 |
| Msa0278130 | MtrunA17_Chr2g0291321 | 58.559 | 333 | 102 | 5 | 24 | 324 | 55 | 383 | 5.84e-133 | 385 |
| Msa0278130 | MtrunA17_Chr7g0231931 | 53.316 | 377 | 134 | 6 | 1 | 358 | 1 | 354 | 1.07e-127 | 384 |
| Msa0278130 | MtrunA17_Chr2g0291421 | 81.651 | 218 | 38 | 2 | 1 | 217 | 1 | 217 | 2.90e-122 | 352 |
| Msa0278130 | MtrunA17_Chr2g0291361 | 57.419 | 310 | 101 | 2 | 46 | 324 | 6 | 315 | 4.21e-122 | 355 |
| Msa0278130 | MtrunA17_Chr2g0286711 | 55.056 | 356 | 122 | 7 | 20 | 358 | 14 | 348 | 1.94e-121 | 367 |
| Msa0278130 | MtrunA17_Chr2g0291391 | 56.380 | 337 | 90 | 8 | 1 | 300 | 1 | 317 | 1.31e-115 | 339 |
| Msa0278130 | MtrunA17_Chr2g0291811 | 58.204 | 323 | 92 | 10 | 46 | 356 | 30 | 321 | 2.44e-103 | 312 |
| Msa0278130 | MtrunA17_Chr2g0310991 | 74.332 | 187 | 39 | 3 | 185 | 362 | 1 | 187 | 1.16e-93 | 278 |
| Msa0278130 | MtrunA17_Chr2g0291351 | 65.241 | 187 | 59 | 3 | 138 | 319 | 4 | 189 | 3.89e-75 | 231 |
| Msa0278130 | MtrunA17_Chr3g0082331 | 39.062 | 384 | 180 | 9 | 1 | 358 | 5 | 360 | 6.37e-74 | 237 |
| Msa0278130 | MtrunA17_Chr4g0025761 | 38.997 | 359 | 166 | 7 | 25 | 360 | 32 | 360 | 1.61e-72 | 231 |
| Msa0278130 | MtrunA17_Chr2g0311061 | 75.000 | 124 | 23 | 2 | 185 | 300 | 1 | 124 | 4.43e-59 | 187 |
| Msa0278130 | MtrunA17_Chr6g0459191 | 46.939 | 196 | 83 | 2 | 185 | 360 | 1 | 195 | 4.19e-57 | 189 |
| Msa0278130 | MtrunA17_Chr4g0056591 | 32.797 | 311 | 181 | 3 | 49 | 355 | 93 | 379 | 4.27e-50 | 179 |
| Msa0278130 | MtrunA17_Chr2g0310931 | 68.333 | 120 | 33 | 2 | 185 | 300 | 1 | 119 | 1.49e-47 | 157 |
| Msa0278130 | MtrunA17_Chr2g0291301 | 42.609 | 230 | 89 | 8 | 25 | 219 | 11 | 232 | 2.87e-47 | 160 |
| Msa0278130 | MtrunA17_Chr8g0391041 | 44.660 | 206 | 84 | 3 | 185 | 360 | 1 | 206 | 6.92e-47 | 162 |
| Msa0278130 | MtrunA17_Chr2g0310881 | 71.111 | 90 | 17 | 2 | 213 | 293 | 43 | 132 | 2.75e-34 | 124 |
| Msa0278130 | MtrunA17_Chr8g0391581 | 34.496 | 258 | 129 | 10 | 1 | 252 | 1 | 224 | 2.60e-30 | 116 |
| Msa0278130 | MtrunA17_Chr8g0391571 | 55.446 | 101 | 43 | 1 | 262 | 360 | 1 | 101 | 7.24e-29 | 111 |
| Msa0278130 | MtrunA17_Chr7g0215051 | 62.500 | 40 | 15 | 0 | 173 | 212 | 35 | 74 | 6.63e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278130 | AT2G45030.1 | 48.541 | 377 | 153 | 6 | 1 | 357 | 1 | 356 | 4.66e-118 | 359 |
| Msa0278130 | AT1G45332.1 | 48.541 | 377 | 153 | 7 | 1 | 357 | 1 | 356 | 1.36e-116 | 355 |
| Msa0278130 | AT1G45332.2 | 62.500 | 176 | 63 | 1 | 185 | 357 | 1 | 176 | 3.45e-77 | 248 |
| Msa0278130 | AT1G62750.1 | 35.048 | 311 | 174 | 3 | 49 | 355 | 97 | 383 | 9.13e-53 | 187 |
Find 83 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGATCTTGTGCAATTAA+AGG | 0.154768 | 2_3:-11054192 | Msa0278130:CDS |
| CTCAAGATCAGCTGCTGATA+TGG | 0.203048 | 2_3:+11053951 | None:intergenic |
| CTACGCAACATTTGGATTTC+GGG | 0.203256 | 2_3:-11055553 | Msa0278130:CDS |
| GCTACGCAACATTTGGATTT+CGG | 0.267195 | 2_3:-11055554 | Msa0278130:CDS |
| ACAGGGGTTACAACTACTTT+TGG | 0.293780 | 2_3:-11050819 | Msa0278130:intron |
| AAATCATCTTCCAAGCCTAT+TGG | 0.313238 | 2_3:+11054224 | None:intergenic |
| TCTGACAGGGGTGCTTTGGC+AGG | 0.331409 | 2_3:+11055520 | None:intergenic |
| GGGCAGTGCTTTCAAATATA+AGG | 0.335629 | 2_3:-11052141 | Msa0278130:intron |
| GAAATTTATACCTTTATTCA+TGG | 0.352287 | 2_3:-11052162 | Msa0278130:CDS |
| ACCAACAGCTACGCAACATT+TGG | 0.361301 | 2_3:-11055561 | Msa0278130:CDS |
| CATTTGCTTATCAACAGAAA+TGG | 0.372670 | 2_3:+11055043 | None:intergenic |
| CAGATGTCACTTTCTTCAAC+TGG | 0.373368 | 2_3:-11055315 | Msa0278130:CDS |
| CACCAAGGCTTCCATATCTT+CGG | 0.373823 | 2_3:+11054053 | None:intergenic |
| TATAAACAATCTTGATCAAA+AGG | 0.381990 | 2_3:-11054991 | Msa0278130:CDS |
| CCGCTCTGACAGGGGTGCTT+TGG | 0.396512 | 2_3:+11055516 | None:intergenic |
| AAAGCACTGCCCATGAATAA+AGG | 0.402220 | 2_3:+11052152 | None:intergenic |
| TATATACAAGTCTTGGAAGT+TGG | 0.404502 | 2_3:+11055012 | None:intergenic |
| TGAAGAAGTTCCCGAAGATA+TGG | 0.422884 | 2_3:-11054064 | Msa0278130:CDS |
| TCAAGATCAGCTGCTGATAT+GGG | 0.426594 | 2_3:+11053952 | None:intergenic |
| GCTGCAATCCAGGTTCCAAT+AGG | 0.434809 | 2_3:-11054239 | Msa0278130:CDS |
| CACTGGTCAGATTGAAAAGA+TGG | 0.449189 | 2_3:-11055482 | Msa0278130:CDS |
| ACATCATTGTGCTGCAATCC+AGG | 0.452060 | 2_3:-11054249 | Msa0278130:CDS |
| TTGTTCTGTCTAGTGTTGGT+GGG | 0.452705 | 2_3:-11055079 | Msa0278130:CDS |
| GTTGCGTAGCTGTTGGTCAT+TGG | 0.453587 | 2_3:+11055567 | None:intergenic |
| AGTTGCTTATTGCAGAGAAA+AGG | 0.460245 | 2_3:-11054094 | Msa0278130:intron |
| CGGCAGCGTCAAAGGCTCGC+AGG | 0.461072 | 2_3:+11055105 | None:intergenic |
| TGGTGTAGTGGTGGTAGAAG+AGG | 0.462251 | 2_3:+11055668 | None:intergenic |
| CTTCAACTGGAAACACCATA+AGG | 0.466513 | 2_3:-11055302 | Msa0278130:intron |
| GAAAGTGGAGGAGAGTAAGC+AGG | 0.468034 | 2_3:+11055627 | None:intergenic |
| CCAATCTAAGAATGAGGAAA+AGG | 0.476719 | 2_3:-11050741 | Msa0278130:CDS |
| CTTCCAAGCCTATTGGAACC+TGG | 0.481715 | 2_3:+11054231 | None:intergenic |
| TTGTTTATATATACAAGTCT+TGG | 0.488111 | 2_3:+11055005 | None:intergenic |
| ACAGTAAAATCAACACGATC+AGG | 0.496194 | 2_3:+11055143 | None:intergenic |
| TTGAAGAAAGTGACATCTGC+AGG | 0.498962 | 2_3:+11055319 | None:intergenic |
| AGGTATAAATTTCCGTGCTA+TGG | 0.502562 | 2_3:+11052172 | None:intergenic |
| GAGACTTCGGTGTGATATTG+AGG | 0.505839 | 2_3:-11055425 | Msa0278130:CDS |
| TCCCGAAGATATGGAAGCCT+TGG | 0.508940 | 2_3:-11054055 | Msa0278130:CDS |
| AACAGACCCATGAAAATAGT+AGG | 0.510799 | 2_3:+11054169 | None:intergenic |
| ATAACATGTACCGCTCTGAC+AGG | 0.511227 | 2_3:+11055506 | None:intergenic |
| CTGACAGGGGTGCTTTGGCA+GGG | 0.523786 | 2_3:+11055521 | None:intergenic |
| GGAAGATGAAGAATGAGAGA+TGG | 0.526800 | 2_3:+11055648 | None:intergenic |
| AAATTTATACCTTTATTCAT+GGG | 0.528674 | 2_3:-11052161 | Msa0278130:CDS |
| TTTGTTCTGTCTAGTGTTGG+TGG | 0.532287 | 2_3:-11055080 | Msa0278130:CDS |
| GAAGTGACGGAGGTGGAAAG+TGG | 0.536356 | 2_3:+11055612 | None:intergenic |
| GTTTGTAGGAATCTGTTCGC+AGG | 0.536514 | 2_3:-11052199 | Msa0278130:intron |
| GTGACGGAGGTGGAAAGTGG+AGG | 0.539232 | 2_3:+11055615 | None:intergenic |
| GCTTATCAACAGAAATGGAC+TGG | 0.542825 | 2_3:+11055048 | None:intergenic |
| GGCAGCGTCAAAGGCTCGCA+GGG | 0.543382 | 2_3:+11055106 | None:intergenic |
| ACCTGATTTAAAACTTGCCA+CGG | 0.543855 | 2_3:+11054960 | None:intergenic |
| GCATAATTACTAGCTTCAGT+TGG | 0.544021 | 2_3:+11050770 | None:intergenic |
| ATAAACAATCTTGATCAAAA+GGG | 0.548697 | 2_3:-11054990 | Msa0278130:CDS |
| ATAAAATCACATATCTGAGT+AGG | 0.553542 | 2_3:+11055343 | None:intergenic |
| CCGCAGAGAAGTGACGGAGG+TGG | 0.556507 | 2_3:+11055605 | None:intergenic |
| ACCAAGGCTTCCATATCTTC+GGG | 0.558360 | 2_3:+11054054 | None:intergenic |
| TGTTCTGTCTAGTGTTGGTG+GGG | 0.562114 | 2_3:-11055078 | Msa0278130:CDS |
| AGCACAATGATGTTGAAGCT+TGG | 0.563927 | 2_3:+11054259 | None:intergenic |
| AATGAGAGATGGTGTAGTGG+TGG | 0.566559 | 2_3:+11055659 | None:intergenic |
| TAACATGTACCGCTCTGACA+GGG | 0.568837 | 2_3:+11055507 | None:intergenic |
| CATATCAGCAGCTGATCTTG+AGG | 0.573243 | 2_3:-11053950 | Msa0278130:intron |
| TGCATGCCGCAGAGAAGTGA+CGG | 0.573645 | 2_3:+11055599 | None:intergenic |
| TATAAATTTCCGTGCTATGG+TGG | 0.577211 | 2_3:+11052175 | None:intergenic |
| TCCAAATGTTGCGTAGCTGT+TGG | 0.578270 | 2_3:+11055560 | None:intergenic |
| TCTCGTCCAATCTAAGAATG+AGG | 0.581147 | 2_3:-11050747 | Msa0278130:CDS |
| AATCCAGGTTCCAATAGGCT+TGG | 0.581211 | 2_3:-11054234 | Msa0278130:CDS |
| TTTGTAGGAATCTGTTCGCA+GGG | 0.584220 | 2_3:-11052198 | Msa0278130:intron |
| GTGATATTGAGGAAGAAGAA+TGG | 0.585002 | 2_3:-11055414 | Msa0278130:CDS |
| ATCTTCGGGAACTTCTTCAA+CGG | 0.596835 | 2_3:+11054068 | None:intergenic |
| AGGCTAGAAATAAAATTCAG+AGG | 0.605962 | 2_3:-11055456 | Msa0278130:CDS |
| TTCGCAGGGCCACCATAGCA+CGG | 0.608330 | 2_3:-11052184 | Msa0278130:CDS |
| AACATGTACCGCTCTGACAG+GGG | 0.612019 | 2_3:+11055508 | None:intergenic |
| TCAGATTGAAAAGATGGAGG+AGG | 0.612637 | 2_3:-11055476 | Msa0278130:CDS |
| AGAGGAGAGAAATGAGACTT+CGG | 0.615400 | 2_3:-11055438 | Msa0278130:CDS |
| TTACTAGCTTCAGTTGGACA+AGG | 0.639073 | 2_3:+11050776 | None:intergenic |
| ATCAAAAGGGAGCAAATCCG+TGG | 0.639394 | 2_3:-11054977 | Msa0278130:CDS |
| TGTAGTGGTGGTAGAAGAGG+AGG | 0.641945 | 2_3:+11055671 | None:intergenic |
| CGGCAAAGAGAAACGAGCCA+TGG | 0.647184 | 2_3:+11055696 | None:intergenic |
| TGGTGGTAGAAGAGGAGGCG+CGG | 0.653091 | 2_3:+11055676 | None:intergenic |
| GAGCGGTACATGTTATACAC+TGG | 0.663717 | 2_3:-11055499 | Msa0278130:CDS |
| AAGAATGAGAGATGGTGTAG+TGG | 0.665657 | 2_3:+11055656 | None:intergenic |
| CCAAAGCACCCCTGTCAGAG+CGG | 0.672418 | 2_3:-11055516 | Msa0278130:CDS |
| TGGTCAGATTGAAAAGATGG+AGG | 0.679900 | 2_3:-11055479 | Msa0278130:CDS |
| CCACCTCCGTCACTTCTCTG+CGG | 0.721572 | 2_3:-11055605 | Msa0278130:CDS |
| ATGCCGCAGAGAAGTGACGG+AGG | 0.729797 | 2_3:+11055602 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACATAATATATATTTGTT+AGG | - | chr2_3:11052723-11052742 | Msa0278130:intron | 10.0% |
| !!! | ATTATGATTTAATTTAGTTT+GGG | - | chr2_3:11054384-11054403 | Msa0278130:intron | 10.0% |
| !!! | ATATTTTTACAAATTACAAA+GGG | + | chr2_3:11054849-11054868 | None:intergenic | 10.0% |
| !! | AAATAAATAAATAATACTTG+TGG | + | chr2_3:11054941-11054960 | None:intergenic | 10.0% |
| !! | AAAAATAAAAAATATAAGAC+TGG | + | chr2_3:11055545-11055564 | None:intergenic | 10.0% |
| !! | GAAAAATACACAAAATTAAA+AGG | - | chr2_3:11051605-11051624 | Msa0278130:intron | 15.0% |
| !! | TATTTAATTATTATTGACCT+TGG | - | chr2_3:11052042-11052061 | Msa0278130:intron | 15.0% |
| !!! | AAATTGTTGTTTTATTTTTC+AGG | - | chr2_3:11052109-11052128 | Msa0278130:intron | 15.0% |
| !!! | AGTTTTGAATACTAATTATT+TGG | - | chr2_3:11052511-11052530 | Msa0278130:intron | 15.0% |
| !!! | ATGTTTTACATACTATATTA+TGG | + | chr2_3:11052709-11052728 | None:intergenic | 15.0% |
| !!! | ATCTTTATTTGTATATAAAG+AGG | - | chr2_3:11052866-11052885 | Msa0278130:intron | 15.0% |
| !! | AATAACAATTAAGGAAAATA+GGG | + | chr2_3:11053048-11053067 | None:intergenic | 15.0% |
| !! | AAATAACAATTAAGGAAAAT+AGG | + | chr2_3:11053049-11053068 | None:intergenic | 15.0% |
| !! | GAAGATATAAATAACAATTA+AGG | + | chr2_3:11053057-11053076 | None:intergenic | 15.0% |
| !!! | TTTTCATTCAATTAATTCTA+TGG | - | chr2_3:11053567-11053586 | Msa0278130:intron | 15.0% |
| !! | AAATTTATACCTTTATTCAT+GGG | - | chr2_3:11054236-11054255 | Msa0278130:CDS | 15.0% |
| !!! | GATTATGATTTAATTTAGTT+TGG | - | chr2_3:11054383-11054402 | Msa0278130:intron | 15.0% |
| !!! | TTCTAACTTTTCAAAAAAAT+GGG | + | chr2_3:11054728-11054747 | None:intergenic | 15.0% |
| !!! | TTTCTAACTTTTCAAAAAAA+TGG | + | chr2_3:11054729-11054748 | None:intergenic | 15.0% |
| !!! | GATATTTTTACAAATTACAA+AGG | + | chr2_3:11054850-11054869 | None:intergenic | 15.0% |
| !! | GTATATATCTAACATATAAT+AGG | + | chr2_3:11055095-11055114 | None:intergenic | 15.0% |
| !! | TAAAATACAATATTAAGAGT+TGG | + | chr2_3:11055522-11055541 | None:intergenic | 15.0% |
| !!! | TTTTTATTTTTTGTTGTTTC+TGG | - | chr2_3:11055554-11055573 | Msa0278130:CDS | 15.0% |
| !! | TTGTTTATATATACAAGTCT+TGG | + | chr2_3:11051395-11051414 | None:intergenic | 20.0% |
| !! | TATAAACAATCTTGATCAAA+AGG | - | chr2_3:11051406-11051425 | Msa0278130:intron | 20.0% |
| !! | ATAAACAATCTTGATCAAAA+GGG | - | chr2_3:11051407-11051426 | Msa0278130:intron | 20.0% |
| !! | CATAATCATAAAAATATCCA+AGG | + | chr2_3:11052062-11052081 | None:intergenic | 20.0% |
| !! | AATGTTATAGAAATGTTTCA+TGG | - | chr2_3:11052669-11052688 | Msa0278130:intron | 20.0% |
| !! | ATGTTATAGAAATGTTTCAT+GGG | - | chr2_3:11052670-11052689 | Msa0278130:intron | 20.0% |
| !! | TTAAGTAGATTATTAGTAAG+TGG | - | chr2_3:11052795-11052814 | Msa0278130:intron | 20.0% |
| !! | ATTAGGGGTTAAATAATAAA+AGG | - | chr2_3:11052821-11052840 | Msa0278130:intron | 20.0% |
| !! | TAACATTCTATTATTTAACC+CGG | + | chr2_3:11052847-11052866 | None:intergenic | 20.0% |
| !!! | CATAATAAGTGTTTTGTTTA+TGG | - | chr2_3:11052914-11052933 | Msa0278130:intron | 20.0% |
| !!! | AAAGAAAGTATTATTTGTTG+AGG | - | chr2_3:11053359-11053378 | Msa0278130:intron | 20.0% |
| !! | AATGAAAATATCATTTGTCT+CGG | + | chr2_3:11053555-11053574 | None:intergenic | 20.0% |
| !!! | TTTGTTATTATTGTGTTTGT+AGG | - | chr2_3:11054184-11054203 | Msa0278130:CDS | 20.0% |
| !! | GAAATTTATACCTTTATTCA+TGG | - | chr2_3:11054235-11054254 | Msa0278130:CDS | 20.0% |
| !!! | CTATTATAATTTGTTACAGA+AGG | - | chr2_3:11054756-11054775 | Msa0278130:intron | 20.0% |
| !! | AACATATAATAGGTTTCTTT+AGG | + | chr2_3:11055085-11055104 | None:intergenic | 20.0% |
| !! | TATGTTAGATATATACTAGA+TGG | - | chr2_3:11055099-11055118 | Msa0278130:CDS | 20.0% |
| !!! | ATCATATGAACTTTTTCTTG+TGG | + | chr2_3:11051034-11051053 | None:intergenic | 25.0% |
| ! | ATAAAATCACATATCTGAGT+AGG | + | chr2_3:11051057-11051076 | None:intergenic | 25.0% |
| !!! | ACTTTAGATTAATGGATTTG+AGG | - | chr2_3:11051462-11051481 | Msa0278130:intron | 25.0% |
| !! | ACTGTTATAGGATTTTATAC+AGG | + | chr2_3:11051498-11051517 | None:intergenic | 25.0% |
| ! | TGAGTATTTATGTATCTTGT+TGG | + | chr2_3:11051579-11051598 | None:intergenic | 25.0% |
| ! | AGAGAAAGAAAACTTAAACA+GGG | - | chr2_3:11051767-11051786 | Msa0278130:intron | 25.0% |
| ! | ACAAAAAAGACATTGTTAGT+CGG | + | chr2_3:11052484-11052503 | None:intergenic | 25.0% |
| !!! | ACAATGTCTTTTTTGTTCAT+TGG | - | chr2_3:11052488-11052507 | Msa0278130:intron | 25.0% |
| !!! | GAGTGTTTTAAGTAATTAAC+TGG | - | chr2_3:11052759-11052778 | Msa0278130:intron | 25.0% |
| !!! | TGTTTTAAGTAATTAACTGG+TGG | - | chr2_3:11052762-11052781 | Msa0278130:intron | 25.0% |
| ! | GTATATAAAGAGGAATTCTT+AGG | - | chr2_3:11052876-11052895 | Msa0278130:intron | 25.0% |
| ! | ATAATATTGAAAGGAACCAA+TGG | + | chr2_3:11053119-11053138 | None:intergenic | 25.0% |
| ! | CTTTCTTTCAATTAAGTCTA+TGG | + | chr2_3:11053347-11053366 | None:intergenic | 25.0% |
| ! | TCTTCAAAGTAATTAACAAG+TGG | + | chr2_3:11053399-11053418 | None:intergenic | 25.0% |
| ! | AACATGAAAGAGAAAATTGA+AGG | - | chr2_3:11053755-11053774 | Msa0278130:intron | 25.0% |
| ! | ACTATTTACAAGATAAGAGA+TGG | + | chr2_3:11054158-11054177 | None:intergenic | 25.0% |
| ! | AATTTCCAAATTGAAATCTC+TGG | + | chr2_3:11054414-11054433 | None:intergenic | 25.0% |
| ! | ATGACACTATGCAAAAAATT+TGG | - | chr2_3:11054481-11054500 | Msa0278130:intron | 25.0% |
| ! | TGACACTATGCAAAAAATTT+GGG | - | chr2_3:11054482-11054501 | Msa0278130:intron | 25.0% |
| ! | ATATATACTAGATGGAAGAA+GGG | - | chr2_3:11055107-11055126 | Msa0278130:CDS | 25.0% |
| AGGCTAGAAATAAAATTCAG+AGG | - | chr2_3:11050941-11050960 | Msa0278130:intron | 30.0% | |
| AAGTGAAAATTGAGACCTTA+TGG | + | chr2_3:11051113-11051132 | None:intergenic | 30.0% | |
| AACACTAGACAGAACAAAAA+CGG | + | chr2_3:11051315-11051334 | None:intergenic | 30.0% | |
| CATTTGCTTATCAACAGAAA+TGG | + | chr2_3:11051357-11051376 | None:intergenic | 30.0% | |
| TATATACAAGTCTTGGAAGT+TGG | + | chr2_3:11051388-11051407 | None:intergenic | 30.0% | |
| TCAGGTGAACTTTAGATTAA+TGG | - | chr2_3:11051454-11051473 | Msa0278130:intron | 30.0% | |
| AAAATCCTATAACAGTACAG+TGG | - | chr2_3:11051502-11051521 | Msa0278130:intron | 30.0% | |
| AAATCCTATAACAGTACAGT+GGG | - | chr2_3:11051503-11051522 | Msa0278130:intron | 30.0% | |
| ! | GTTTTCTTTCTCTGTACTTT+AGG | + | chr2_3:11051760-11051779 | None:intergenic | 30.0% |
| CAGAGAAAGAAAACTTAAAC+AGG | - | chr2_3:11051766-11051785 | Msa0278130:intron | 30.0% | |
| ! | TCAAACTGCTATTGATAACA+TGG | - | chr2_3:11051822-11051841 | Msa0278130:intron | 30.0% |
| TTTGTCTCTATTCTATACAC+AGG | - | chr2_3:11051984-11052003 | Msa0278130:intron | 30.0% | |
| TTGTCTCTATTCTATACACA+GGG | - | chr2_3:11051985-11052004 | Msa0278130:intron | 30.0% | |
| TGTTGATCTTGTGCAATTAA+AGG | - | chr2_3:11052205-11052224 | Msa0278130:intron | 30.0% | |
| ! | TTAAAGGCCTACTATTTTCA+TGG | - | chr2_3:11052221-11052240 | Msa0278130:intron | 30.0% |
| ! | TAAAGGCCTACTATTTTCAT+GGG | - | chr2_3:11052222-11052241 | Msa0278130:intron | 30.0% |
| AGTAATTTGAAGAATAACCG+CGG | + | chr2_3:11052279-11052298 | None:intergenic | 30.0% | |
| ACTCATAAAAACTGTATCAG+AGG | - | chr2_3:11052384-11052403 | Msa0278130:intron | 30.0% | |
| CTTAAAACACTCTCTCATAT+TGG | + | chr2_3:11052751-11052770 | None:intergenic | 30.0% | |
| TAATTAACTGGTGGTTAAGT+AGG | - | chr2_3:11052771-11052790 | Msa0278130:intron | 30.0% | |
| TTATTAGTAAGTGGCACATT+AGG | - | chr2_3:11052804-11052823 | Msa0278130:intron | 30.0% | |
| TATTAGTAAGTGGCACATTA+GGG | - | chr2_3:11052805-11052824 | Msa0278130:intron | 30.0% | |
| ACACTTATTATGTCATACTC+TGG | + | chr2_3:11052906-11052925 | None:intergenic | 30.0% | |
| ! | GACATATATTGATAGTCGTT+TGG | + | chr2_3:11053319-11053338 | None:intergenic | 30.0% |
| ! | AGTATTATTTGTTGAGGAAG+AGG | - | chr2_3:11053365-11053384 | Msa0278130:intron | 30.0% |
| ! | GTATTATTTGTTGAGGAAGA+GGG | - | chr2_3:11053366-11053385 | Msa0278130:intron | 30.0% |
| AAGTCTCGAGTTTGATATAA+GGG | - | chr2_3:11053503-11053522 | Msa0278130:intron | 30.0% | |
| TATCAAACAATGTTGCCAAA+AGG | - | chr2_3:11053730-11053749 | Msa0278130:intron | 30.0% | |
| ! | TCTCTTTCATGTTTTCCTTT+TGG | + | chr2_3:11053748-11053767 | None:intergenic | 30.0% |
| ATCCTCTCTATGAAAGAAAA+TGG | + | chr2_3:11053794-11053813 | None:intergenic | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | + | chr2_3:11054057-11054076 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr2_3:11054060-11054079 | None:intergenic | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr2_3:11054064-11054083 | Msa0278130:CDS | 30.0% | |
| TCATATATCACACTATGAGT+TGG | + | chr2_3:11054114-11054133 | None:intergenic | 30.0% | |
| TTTACAAGATAAGAGATGGA+GGG | + | chr2_3:11054154-11054173 | None:intergenic | 30.0% | |
| ATTTACAAGATAAGAGATGG+AGG | + | chr2_3:11054155-11054174 | None:intergenic | 30.0% | |
| ! | ACCTTGAATTTTCTGTTGTA+TGG | - | chr2_3:11054292-11054311 | Msa0278130:intron | 30.0% |
| ACCATACAACAGAAAATTCA+AGG | + | chr2_3:11054296-11054315 | None:intergenic | 30.0% | |
| CATAATCATAGTAAAGAGTC+AGG | + | chr2_3:11054370-11054389 | None:intergenic | 30.0% | |
| CTCATACATAACCATAGTAA+GGG | + | chr2_3:11054688-11054707 | None:intergenic | 30.0% | |
| GATATATACTAGATGGAAGA+AGG | - | chr2_3:11055106-11055125 | Msa0278130:CDS | 30.0% | |
| ! | AGTTATTTACACCTAGCTTT+GGG | - | chr2_3:11055174-11055193 | Msa0278130:intron | 30.0% |
| ! | GTTTGTTGACAAAGAATCAA+AGG | - | chr2_3:11055238-11055257 | Msa0278130:intron | 30.0% |
| !! | TGTAAGCGTTTATGCTATTT+TGG | - | chr2_3:11055292-11055311 | Msa0278130:intron | 30.0% |
| GAATCAACGTTATCAAATAG+TGG | + | chr2_3:11055475-11055494 | None:intergenic | 30.0% | |
| !! | CTATTTGATAACGTTGATTC+TGG | - | chr2_3:11055475-11055494 | Msa0278130:CDS | 30.0% |
| !!! | TTTTTTGTTGTTTCTGGTAC+AGG | - | chr2_3:11055560-11055579 | Msa0278130:CDS | 30.0% |
| !!! | TTTTTGTTGTTTCTGGTACA+GGG | - | chr2_3:11055561-11055580 | Msa0278130:CDS | 30.0% |
| GTGATATTGAGGAAGAAGAA+TGG | - | chr2_3:11050983-11051002 | Msa0278130:intron | 35.0% | |
| !!! | GGCTCAATTTTAGTTATCGT+CGG | - | chr2_3:11051004-11051023 | Msa0278130:intron | 35.0% |
| ACAGTAAAATCAACACGATC+AGG | + | chr2_3:11051257-11051276 | None:intergenic | 35.0% | |
| ! | GTTTTTGTTCTGTCTAGTGT+TGG | - | chr2_3:11051314-11051333 | Msa0278130:intron | 35.0% |
| ! | ACCTGATTTAAAACTTGCCA+CGG | + | chr2_3:11051440-11051459 | None:intergenic | 35.0% |
| CAAAAAATGACATCAAGACG+AGG | - | chr2_3:11051680-11051699 | Msa0278130:intron | 35.0% | |
| ! | TCTTTTTGCTCTGTTTGGTT+GGG | + | chr2_3:11051725-11051744 | None:intergenic | 35.0% |
| ! | TTCTTTTTGCTCTGTTTGGT+TGG | + | chr2_3:11051726-11051745 | None:intergenic | 35.0% |
| CAAACAGAGCAAAAAGAACA+CGG | - | chr2_3:11051728-11051747 | Msa0278130:intron | 35.0% | |
| AAATCATCTTCCAAGCCTAT+TGG | + | chr2_3:11052176-11052195 | None:intergenic | 35.0% | |
| ! | AGGCTTGGAAGATGATTTTA+AGG | - | chr2_3:11052178-11052197 | Msa0278130:CDS | 35.0% |
| ! | GGCTTGGAAGATGATTTTAA+GGG | - | chr2_3:11052179-11052198 | Msa0278130:CDS | 35.0% |
| AACAGACCCATGAAAATAGT+AGG | + | chr2_3:11052231-11052250 | None:intergenic | 35.0% | |
| ! | TGTTTCTGTAACTTCTGCAT+CGG | - | chr2_3:11052247-11052266 | Msa0278130:intron | 35.0% |
| GTAATTTGAAGAATAACCGC+GGG | + | chr2_3:11052278-11052297 | None:intergenic | 35.0% | |
| AGTTGCTTATTGCAGAGAAA+AGG | - | chr2_3:11052303-11052322 | Msa0278130:intron | 35.0% | |
| !! | CATATTGTCTTGAAGTGTTG+AGG | - | chr2_3:11052590-11052609 | Msa0278130:intron | 35.0% |
| TAGAAATGTTTCATGGGTCT+CGG | - | chr2_3:11052676-11052695 | Msa0278130:intron | 35.0% | |
| ATTAGTAAGTGGCACATTAG+GGG | - | chr2_3:11052806-11052825 | Msa0278130:intron | 35.0% | |
| GGGGTTAAATAATAAAAGGC+CGG | - | chr2_3:11052825-11052844 | Msa0278130:intron | 35.0% | |
| GGGTTAAATAATAAAAGGCC+GGG | - | chr2_3:11052826-11052845 | Msa0278130:intron | 35.0% | |
| !!! | GTTTTGTTTATGGCTAGAGT+AGG | - | chr2_3:11052924-11052943 | Msa0278130:intron | 35.0% |
| AACTTCAACACAACTCAAAG+AGG | + | chr2_3:11052953-11052972 | None:intergenic | 35.0% | |
| ! | TTGTGTTGAAGTTTTGCTCT+GGG | - | chr2_3:11052960-11052979 | Msa0278130:intron | 35.0% |
| !! | AGCTCTAAGGATAACAATTG+TGG | + | chr2_3:11053161-11053180 | None:intergenic | 35.0% |
| ATCCTTAGAGCTGTCAATTA+TGG | - | chr2_3:11053169-11053188 | Msa0278130:intron | 35.0% | |
| ATCCATAATTGACAGCTCTA+AGG | + | chr2_3:11053174-11053193 | None:intergenic | 35.0% | |
| ! | GAGCTGTCAATTATGGATTA+TGG | - | chr2_3:11053176-11053195 | Msa0278130:intron | 35.0% |
| ! | CTGTCAATTATGGATTATGG+TGG | - | chr2_3:11053179-11053198 | Msa0278130:intron | 35.0% |
| !! | ATATGTTTACGGCGGATTTT+GGG | + | chr2_3:11053209-11053228 | None:intergenic | 35.0% |
| CACCGATCATCATATGTTTA+CGG | + | chr2_3:11053220-11053239 | None:intergenic | 35.0% | |
| ATGATCGGTGTAACAACATA+TGG | - | chr2_3:11053230-11053249 | Msa0278130:intron | 35.0% | |
| TAACAACATATGGAGAAGCA+TGG | - | chr2_3:11053240-11053259 | Msa0278130:intron | 35.0% | |
| ! | CTTTGAAGATGATTGTGTTG+AGG | - | chr2_3:11053410-11053429 | Msa0278130:intron | 35.0% |
| GAAGTCTCGAGTTTGATATA+AGG | - | chr2_3:11053502-11053521 | Msa0278130:intron | 35.0% | |
| AGTCTCGAGTTTGATATAAG+GGG | - | chr2_3:11053504-11053523 | Msa0278130:intron | 35.0% | |
| AGTTTGATATAAGGGGTTGT+TGG | - | chr2_3:11053511-11053530 | Msa0278130:intron | 35.0% | |
| ! | CACATGTTTTTCCACTTGTT+AGG | + | chr2_3:11053700-11053719 | None:intergenic | 35.0% |
| ACATTGTTTGATACGATACG+AGG | + | chr2_3:11053723-11053742 | None:intergenic | 35.0% | |
| !!! | TGCCATTTTCTTTCATAGAG+AGG | - | chr2_3:11053789-11053808 | Msa0278130:intron | 35.0% |
| ATATAGCCTGTATTATCCCT+TGG | - | chr2_3:11053812-11053831 | Msa0278130:intron | 35.0% | |
| TATAGCCTGTATTATCCCTT+GGG | - | chr2_3:11053813-11053832 | Msa0278130:intron | 35.0% | |
| AACTTCATCTCAAAACCCAA+GGG | + | chr2_3:11053831-11053850 | None:intergenic | 35.0% | |
| GCGCAAAATGAATTTGAATC+AGG | + | chr2_3:11053866-11053885 | None:intergenic | 35.0% | |
| ! | TTGCGCATGTATTGCATTTT+TGG | - | chr2_3:11053880-11053899 | Msa0278130:intron | 35.0% |
| ! | TGCGCATGTATTGCATTTTT+GGG | - | chr2_3:11053881-11053900 | Msa0278130:intron | 35.0% |
| !!! | CATGTATTGCATTTTTGGGT+TGG | - | chr2_3:11053885-11053904 | Msa0278130:intron | 35.0% |
| !! | ACAAAAAGTGGGTTTTCCAA+AGG | + | chr2_3:11053913-11053932 | None:intergenic | 35.0% |
| GAGGTACATGAACAAAAAGT+GGG | + | chr2_3:11053924-11053943 | None:intergenic | 35.0% | |
| ! | AGAGGTACATGAACAAAAAG+TGG | + | chr2_3:11053925-11053944 | None:intergenic | 35.0% |
| ! | TTTTGTTCATGTACCTCTGA+AGG | - | chr2_3:11053927-11053946 | Msa0278130:intron | 35.0% |
| ! | CTATGAGTTGGATCCAAATA+TGG | + | chr2_3:11054080-11054099 | None:intergenic | 35.0% |
| TTACAAGATAAGAGATGGAG+GGG | + | chr2_3:11054153-11054172 | None:intergenic | 35.0% | |
| TATAAATTTCCGTGCTATGG+TGG | + | chr2_3:11054225-11054244 | None:intergenic | 35.0% | |
| AGGTATAAATTTCCGTGCTA+TGG | + | chr2_3:11054228-11054247 | None:intergenic | 35.0% | |
| GAAAGAAAGGGAATGAATGA+AGG | + | chr2_3:11054324-11054343 | None:intergenic | 35.0% | |
| AGAGTCTACTGAGAAAGAAA+GGG | + | chr2_3:11054336-11054355 | None:intergenic | 35.0% | |
| AAGAGTCTACTGAGAAAGAA+AGG | + | chr2_3:11054337-11054356 | None:intergenic | 35.0% | |
| GTCTTCCAGAGATTTCAATT+TGG | - | chr2_3:11054406-11054425 | Msa0278130:intron | 35.0% | |
| TAGCATTCTTAGCACGATAA+TGG | - | chr2_3:11054445-11054464 | Msa0278130:intron | 35.0% | |
| !!! | AGCTAGCTTTTAAAACAGCA+GGG | + | chr2_3:11054639-11054658 | None:intergenic | 35.0% |
| !!! | TAGCTAGCTTTTAAAACAGC+AGG | + | chr2_3:11054640-11054659 | None:intergenic | 35.0% |
| ACATAACCATAGTAAGGGAA+TGG | + | chr2_3:11054683-11054702 | None:intergenic | 35.0% | |
| CCTCATACATAACCATAGTA+AGG | + | chr2_3:11054689-11054708 | None:intergenic | 35.0% | |
| CCTTACTATGGTTATGTATG+AGG | - | chr2_3:11054686-11054705 | Msa0278130:intron | 35.0% | |
| TAATGAGGTTGAACATGACT+TGG | - | chr2_3:11055040-11055059 | Msa0278130:CDS | 35.0% | |
| ! | ACATGACTTGGATCATATGT+TGG | - | chr2_3:11055052-11055071 | Msa0278130:CDS | 35.0% |
| AGGAGAATTAGTTGTTAGGT+TGG | - | chr2_3:11055140-11055159 | Msa0278130:CDS | 35.0% | |
| GGAGAATTAGTTGTTAGGTT+GGG | - | chr2_3:11055141-11055160 | Msa0278130:CDS | 35.0% | |
| CAAAGCTAGGTGTAAATAAC+TGG | + | chr2_3:11055175-11055194 | None:intergenic | 35.0% | |
| CAGTTATTTACACCTAGCTT+TGG | - | chr2_3:11055173-11055192 | Msa0278130:intron | 35.0% | |
| ACAAAGAATCAAAGGAGCTT+TGG | - | chr2_3:11055246-11055265 | Msa0278130:intron | 35.0% | |
| CAAAGAATCAAAGGAGCTTT+GGG | - | chr2_3:11055247-11055266 | Msa0278130:intron | 35.0% | |
| AAAGAATCAAAGGAGCTTTG+GGG | - | chr2_3:11055248-11055267 | Msa0278130:intron | 35.0% | |
| GATTACAGAGAGTGAAACTA+TGG | - | chr2_3:11055326-11055345 | Msa0278130:CDS | 35.0% | |
| GAAATAGCAGATAAACATGG+AGG | + | chr2_3:11055368-11055387 | None:intergenic | 35.0% | |
| GTGGAAATAGCAGATAAACA+TGG | + | chr2_3:11055371-11055390 | None:intergenic | 35.0% | |
| !!! | TTTTGTTGTTTCTGGTACAG+GGG | - | chr2_3:11055562-11055581 | Msa0278130:CDS | 35.0% |
| ! | GCATAATTACTAGCTTCAGT+TGG | + | chr2_3:11055630-11055649 | None:intergenic | 35.0% |
| ! | CCTTTTCCTCATTCTTAGAT+TGG | + | chr2_3:11055659-11055678 | None:intergenic | 35.0% |
| CCAATCTAAGAATGAGGAAA+AGG | - | chr2_3:11055656-11055675 | Msa0278130:CDS | 35.0% | |
| AAGAATGAGAGATGGTGTAG+TGG | + | chr2_3:11050744-11050763 | None:intergenic | 40.0% | |
| GGAAGATGAAGAATGAGAGA+TGG | + | chr2_3:11050752-11050771 | None:intergenic | 40.0% | |
| GCTACGCAACATTTGGATTT+CGG | - | chr2_3:11050843-11050862 | Msa0278130:intron | 40.0% | |
| CTACGCAACATTTGGATTTC+GGG | - | chr2_3:11050844-11050863 | Msa0278130:intron | 40.0% | |
| CACTGGTCAGATTGAAAAGA+TGG | - | chr2_3:11050915-11050934 | Msa0278130:intron | 40.0% | |
| TGGTCAGATTGAAAAGATGG+AGG | - | chr2_3:11050918-11050937 | Msa0278130:intron | 40.0% | |
| TCAGATTGAAAAGATGGAGG+AGG | - | chr2_3:11050921-11050940 | Msa0278130:intron | 40.0% | |
| AGAGGAGAGAAATGAGACTT+CGG | - | chr2_3:11050959-11050978 | Msa0278130:intron | 40.0% | |
| TTGAAGAAAGTGACATCTGC+AGG | + | chr2_3:11051081-11051100 | None:intergenic | 40.0% | |
| !! | CAGATGTCACTTTCTTCAAC+TGG | - | chr2_3:11051082-11051101 | Msa0278130:intron | 40.0% |
| CTTCAACTGGAAACACCATA+AGG | - | chr2_3:11051095-11051114 | Msa0278130:intron | 40.0% | |
| TATCAATTACGCTCATCTGC+AGG | + | chr2_3:11051232-11051251 | None:intergenic | 40.0% | |
| ! | TTTGTTCTGTCTAGTGTTGG+TGG | - | chr2_3:11051317-11051336 | Msa0278130:intron | 40.0% |
| !! | TTGTTCTGTCTAGTGTTGGT+GGG | - | chr2_3:11051318-11051337 | Msa0278130:intron | 40.0% |
| GCTTATCAACAGAAATGGAC+TGG | + | chr2_3:11051352-11051371 | None:intergenic | 40.0% | |
| !!! | TCCGTGGCAAGTTTTAAATC+AGG | - | chr2_3:11051436-11051455 | Msa0278130:intron | 40.0% |
| CTATCCCACTGTACTGTTAT+AGG | + | chr2_3:11051510-11051529 | None:intergenic | 40.0% | |
| ! | CGTGTTCTTTTTGCTCTGTT+TGG | + | chr2_3:11051730-11051749 | None:intergenic | 40.0% |
| AGCACAATGATGTTGAAGCT+TGG | + | chr2_3:11052141-11052160 | None:intergenic | 40.0% | |
| ATCTTCGGGAACTTCTTCAA+CGG | + | chr2_3:11052332-11052351 | None:intergenic | 40.0% | |
| TGAAGAAGTTCCCGAAGATA+TGG | - | chr2_3:11052333-11052352 | Msa0278130:intron | 40.0% | |
| !! | AAGCCTTGGTGTCAGAAAAA+AGG | - | chr2_3:11052356-11052375 | Msa0278130:intron | 40.0% |
| !!! | ATGCCTTTTTTCTGACACCA+AGG | + | chr2_3:11052362-11052381 | None:intergenic | 40.0% |
| TCAAGATCAGCTGCTGATAT+GGG | + | chr2_3:11052448-11052467 | None:intergenic | 40.0% | |
| ! | GTTGTGTTGAAGTTTTGCTC+TGG | - | chr2_3:11052959-11052978 | Msa0278130:intron | 40.0% |
| TTGCTTGTGTTGTGTTCGAT+TGG | - | chr2_3:11053080-11053099 | Msa0278130:intron | 40.0% | |
| ! | GTGTTCGATTGGTTGATTGT+AGG | - | chr2_3:11053091-11053110 | Msa0278130:intron | 40.0% |
| TGGTTGATTGTAGGATCCAT+TGG | - | chr2_3:11053100-11053119 | Msa0278130:intron | 40.0% | |
| !! | CATATGTTTACGGCGGATTT+TGG | + | chr2_3:11053210-11053229 | None:intergenic | 40.0% |
| CGATCATCATATGTTTACGG+CGG | + | chr2_3:11053217-11053236 | None:intergenic | 40.0% | |
| CGCCGTAAACATATGATGAT+CGG | - | chr2_3:11053215-11053234 | Msa0278130:intron | 40.0% | |
| AAGTAGTGAACAACACTGTG+AGG | - | chr2_3:11053618-11053637 | Msa0278130:intron | 40.0% | |
| CAAAACCCAAGGGATAATAC+AGG | + | chr2_3:11053821-11053840 | None:intergenic | 40.0% | |
| CAACTTCATCTCAAAACCCA+AGG | + | chr2_3:11053832-11053851 | None:intergenic | 40.0% | |
| !!! | CATTTTTGGGTTGGATCCTT+TGG | - | chr2_3:11053894-11053913 | Msa0278130:intron | 40.0% |
| TACAAGATAAGAGATGGAGG+GGG | + | chr2_3:11054152-11054171 | None:intergenic | 40.0% | |
| TTTGTAGGAATCTGTTCGCA+GGG | - | chr2_3:11054199-11054218 | Msa0278130:CDS | 40.0% | |
| !! | AAAGCACTGCCCATGAATAA+AGG | + | chr2_3:11054248-11054267 | None:intergenic | 40.0% |
| GGGCAGTGCTTTCAAATATA+AGG | - | chr2_3:11054256-11054275 | Msa0278130:CDS | 40.0% | |
| CTATGCAAAAAATTTGGGCC+TGG | - | chr2_3:11054487-11054506 | Msa0278130:intron | 40.0% | |
| GTGTGACATAAGATTAGACC+AGG | + | chr2_3:11054508-11054527 | None:intergenic | 40.0% | |
| ! | GCTTTTCCATTCCCTTACTA+TGG | - | chr2_3:11054674-11054693 | Msa0278130:intron | 40.0% |
| TTAAGAGACAAAGCTCCAAG+AGG | - | chr2_3:11054791-11054810 | Msa0278130:intron | 40.0% | |
| TTAGGACAGTGTATCGCATT+AGG | + | chr2_3:11055001-11055020 | None:intergenic | 40.0% | |
| GATACACTGTCCTAAGTTCT+AGG | - | chr2_3:11055006-11055025 | Msa0278130:CDS | 40.0% | |
| TCAACCTCATTATCGCTCTT+AGG | + | chr2_3:11055032-11055051 | None:intergenic | 40.0% | |
| TAACAACTAATTCTCCTCCC+TGG | + | chr2_3:11055137-11055156 | None:intergenic | 40.0% | |
| AGGGAGGAGAATTAGTTGTT+AGG | - | chr2_3:11055136-11055155 | Msa0278130:CDS | 40.0% | |
| !! | AGTTGTTAGGTTGGGTTAGT+TGG | - | chr2_3:11055149-11055168 | Msa0278130:CDS | 40.0% |
| !!! | AGCGTTTATGCTATTTTGGC+TGG | - | chr2_3:11055296-11055315 | Msa0278130:intron | 40.0% |
| GAGAGTGAAACTATGGAAGA+AGG | - | chr2_3:11055333-11055352 | Msa0278130:CDS | 40.0% | |
| ATTTCCACCATGAAATGCCA+TGG | - | chr2_3:11055383-11055402 | Msa0278130:CDS | 40.0% | |
| TATGGCCAATTTGTGAAGCA+TGG | + | chr2_3:11055414-11055433 | None:intergenic | 40.0% | |
| ACGTTATCAAATAGTGGCCA+TGG | + | chr2_3:11055469-11055488 | None:intergenic | 40.0% | |
| ! | ACAGGGGTTACAACTACTTT+TGG | - | chr2_3:11055578-11055597 | Msa0278130:CDS | 40.0% |
| !! | GGGTTACAACTACTTTTGGA+TGG | - | chr2_3:11055582-11055601 | Msa0278130:CDS | 40.0% |
| ! | TTACTAGCTTCAGTTGGACA+AGG | + | chr2_3:11055624-11055643 | None:intergenic | 40.0% |
| TCTCGTCCAATCTAAGAATG+AGG | - | chr2_3:11055650-11055669 | Msa0278130:CDS | 40.0% | |
| AATGAGAGATGGTGTAGTGG+TGG | + | chr2_3:11050741-11050760 | None:intergenic | 45.0% | |
| ACCAACAGCTACGCAACATT+TGG | - | chr2_3:11050836-11050855 | Msa0278130:intron | 45.0% | |
| TCCAAATGTTGCGTAGCTGT+TGG | + | chr2_3:11050840-11050859 | None:intergenic | 45.0% | |
| TAACATGTACCGCTCTGACA+GGG | + | chr2_3:11050893-11050912 | None:intergenic | 45.0% | |
| ATAACATGTACCGCTCTGAC+AGG | + | chr2_3:11050894-11050913 | None:intergenic | 45.0% | |
| GAGCGGTACATGTTATACAC+TGG | - | chr2_3:11050898-11050917 | Msa0278130:intron | 45.0% | |
| ! | GAGACTTCGGTGTGATATTG+AGG | - | chr2_3:11050972-11050991 | Msa0278130:intron | 45.0% |
| ATTACGCTCATCTGCAGGAA+CGG | + | chr2_3:11051227-11051246 | None:intergenic | 45.0% | |
| AACAAAAACGGCAGCGTCAA+AGG | + | chr2_3:11051303-11051322 | None:intergenic | 45.0% | |
| !! | TGTTCTGTCTAGTGTTGGTG+GGG | - | chr2_3:11051319-11051338 | Msa0278130:intron | 45.0% |
| ATCAAAAGGGAGCAAATCCG+TGG | - | chr2_3:11051420-11051439 | Msa0278130:intron | 45.0% | |
| ACATCATTGTGCTGCAATCC+AGG | - | chr2_3:11052148-11052167 | Msa0278130:CDS | 45.0% | |
| AATCCAGGTTCCAATAGGCT+TGG | - | chr2_3:11052163-11052182 | Msa0278130:CDS | 45.0% | |
| ACCAAGGCTTCCATATCTTC+GGG | + | chr2_3:11052346-11052365 | None:intergenic | 45.0% | |
| CACCAAGGCTTCCATATCTT+CGG | + | chr2_3:11052347-11052366 | None:intergenic | 45.0% | |
| CTCAAGATCAGCTGCTGATA+TGG | + | chr2_3:11052449-11052468 | None:intergenic | 45.0% | |
| CATATCAGCAGCTGATCTTG+AGG | - | chr2_3:11052447-11052466 | Msa0278130:intron | 45.0% | |
| ! | CAACATATGGAGAAGCATGG+CGG | - | chr2_3:11053243-11053262 | Msa0278130:intron | 45.0% |
| TACTGACCAGTACTATCCCT+TGG | - | chr2_3:11053655-11053674 | Msa0278130:intron | 45.0% | |
| TTCTCTCCAAGGGATAGTAC+TGG | + | chr2_3:11053664-11053683 | None:intergenic | 45.0% | |
| CACTAGAAGCTTCTCTCCAA+GGG | + | chr2_3:11053674-11053693 | None:intergenic | 45.0% | |
| CTTGGAGAGAAGCTTCTAGT+GGG | - | chr2_3:11053673-11053692 | Msa0278130:intron | 45.0% | |
| TTCTAGTGGGACCTAACAAG+TGG | - | chr2_3:11053686-11053705 | Msa0278130:intron | 45.0% | |
| ACAAATGCATCTGCCTTCAG+AGG | + | chr2_3:11053943-11053962 | None:intergenic | 45.0% | |
| AACGCCTTATCCCACTAAGT+GGG | - | chr2_3:11054010-11054029 | Msa0278130:CDS | 45.0% | |
| GATCCAACTCATAGACCTCA+TGG | - | chr2_3:11054086-11054105 | Msa0278130:intron | 45.0% | |
| GATCCATGAGGTCTATGAGT+TGG | + | chr2_3:11054092-11054111 | None:intergenic | 45.0% | |
| ! | CACTATGAGTTGGATCCATG+AGG | + | chr2_3:11054104-11054123 | None:intergenic | 45.0% |
| GTTTGTAGGAATCTGTTCGC+AGG | - | chr2_3:11054198-11054217 | Msa0278130:CDS | 45.0% | |
| TAGGCCTAAGAGCGATAATG+AGG | - | chr2_3:11055025-11055044 | Msa0278130:CDS | 45.0% | |
| TGCCACCATGCTTCACAAAT+TGG | - | chr2_3:11055406-11055425 | Msa0278130:CDS | 45.0% | |
| GCTTCACAAATTGGCCATAG+CGG | - | chr2_3:11055415-11055434 | Msa0278130:CDS | 45.0% | |
| ! | GGATTTTTCGTGAACCGCTA+TGG | + | chr2_3:11055432-11055451 | None:intergenic | 45.0% |
| !!! | TTATATTTTATAATATTGAA+AGG | + | chr2_3:11053128-11053147 | None:intergenic | 5.0% |
| !! | TTCAATATTATAAAATATAA+TGG | - | chr2_3:11053128-11053147 | Msa0278130:intron | 5.0% |
| TGTAGTGGTGGTAGAAGAGG+AGG | + | chr2_3:11050729-11050748 | None:intergenic | 50.0% | |
| TGGTGTAGTGGTGGTAGAAG+AGG | + | chr2_3:11050732-11050751 | None:intergenic | 50.0% | |
| GAAAGTGGAGGAGAGTAAGC+AGG | + | chr2_3:11050773-11050792 | None:intergenic | 50.0% | |
| GTTGCGTAGCTGTTGGTCAT+TGG | + | chr2_3:11050833-11050852 | None:intergenic | 50.0% | |
| AACATGTACCGCTCTGACAG+GGG | + | chr2_3:11050892-11050911 | None:intergenic | 50.0% | |
| CAGTGGGATAGCTGCTATTG+CGG | - | chr2_3:11051519-11051538 | Msa0278130:intron | 50.0% | |
| GCTGCAATCCAGGTTCCAAT+AGG | - | chr2_3:11052158-11052177 | Msa0278130:CDS | 50.0% | |
| CTTCCAAGCCTATTGGAACC+TGG | + | chr2_3:11052169-11052188 | None:intergenic | 50.0% | |
| !! | TTCTGCATCGGTTATACCCG+CGG | - | chr2_3:11052259-11052278 | Msa0278130:intron | 50.0% |
| TCCCGAAGATATGGAAGCCT+TGG | - | chr2_3:11052342-11052361 | Msa0278130:intron | 50.0% | |
| CAGCTGATCTTGAGGTGTGT+GGG | - | chr2_3:11052455-11052474 | Msa0278130:intron | 50.0% | |
| CCACTAGAAGCTTCTCTCCA+AGG | + | chr2_3:11053675-11053694 | None:intergenic | 50.0% | |
| CCTTGGAGAGAAGCTTCTAG+TGG | - | chr2_3:11053672-11053691 | Msa0278130:intron | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | - | chr2_3:11054009-11054028 | Msa0278130:CDS | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | - | chr2_3:11054011-11054030 | Msa0278130:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr2_3:11054015-11054034 | Msa0278130:CDS | 50.0% | |
| GATGGAGGGGGAATAACAAC+TGG | + | chr2_3:11054140-11054159 | None:intergenic | 50.0% | |
| CTCCAAGAGGTTTGCACTTC+TGG | - | chr2_3:11054804-11054823 | Msa0278130:intron | 50.0% | |
| ! | CTCCAGAAGTGCAAACCTCT+TGG | + | chr2_3:11054809-11054828 | None:intergenic | 50.0% |
| CGCTCTTAGGCCTAGAACTT+AGG | + | chr2_3:11055019-11055038 | None:intergenic | 50.0% | |
| GGCCAATTTGTGAAGCATGG+TGG | + | chr2_3:11055411-11055430 | None:intergenic | 50.0% | |
| TCCTTCTCTGCAATCTGCCA+TGG | - | chr2_3:11055449-11055468 | Msa0278130:CDS | 50.0% | |
| ! | GAAGTGACGGAGGTGGAAAG+TGG | + | chr2_3:11050788-11050807 | None:intergenic | 55.0% |
| TGCATGCCGCAGAGAAGTGA+CGG | + | chr2_3:11050801-11050820 | None:intergenic | 55.0% | |
| GCAGCTGATCTTGAGGTGTG+TGG | - | chr2_3:11052454-11052473 | Msa0278130:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr2_3:11054017-11054036 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr2_3:11054023-11054042 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr2_3:11054024-11054043 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr2_3:11054023-11054042 | Msa0278130:CDS | 55.0% | |
| AGATGGAAGAAGGGTGAGCC+AGG | - | chr2_3:11055116-11055135 | Msa0278130:CDS | 55.0% | |
| GATGGAAGAAGGGTGAGCCA+GGG | - | chr2_3:11055117-11055136 | Msa0278130:CDS | 55.0% | |
| !! | GAGCTTTGGGGCTCTACTGA+AGG | - | chr2_3:11055260-11055279 | Msa0278130:intron | 55.0% |
| GGCACCATGGCATTTCATGG+TGG | + | chr2_3:11055390-11055409 | None:intergenic | 55.0% | |
| GGTGGCACCATGGCATTTCA+TGG | + | chr2_3:11055393-11055412 | None:intergenic | 55.0% | |
| TGTGAAGCATGGTGGCACCA+TGG | + | chr2_3:11055403-11055422 | None:intergenic | 55.0% | |
| GCCATGGCAGATTGCAGAGA+AGG | + | chr2_3:11055453-11055472 | None:intergenic | 55.0% | |
| TGGTGGTAGAAGAGGAGGCG+CGG | + | chr2_3:11050724-11050743 | None:intergenic | 60.0% | |
| ! | GTGACGGAGGTGGAAAGTGG+AGG | + | chr2_3:11050785-11050804 | None:intergenic | 60.0% |
| CCACCTCCGTCACTTCTCTG+CGG | - | chr2_3:11050792-11050811 | Msa0278130:CDS | 60.0% | |
| ATGCCGCAGAGAAGTGACGG+AGG | + | chr2_3:11050798-11050817 | None:intergenic | 60.0% | |
| !! | CTGACAGGGGTGCTTTGGCA+GGG | + | chr2_3:11050879-11050898 | None:intergenic | 60.0% |
| !! | TCTGACAGGGGTGCTTTGGC+AGG | + | chr2_3:11050880-11050899 | None:intergenic | 60.0% |
| ! | CCAAAGCACCCCTGTCAGAG+CGG | - | chr2_3:11050881-11050900 | Msa0278130:intron | 60.0% |
| TTCGCAGGGCCACCATAGCA+CGG | - | chr2_3:11054213-11054232 | Msa0278130:CDS | 60.0% | |
| ! | CCGCAGAGAAGTGACGGAGG+TGG | + | chr2_3:11050795-11050814 | None:intergenic | 65.0% |
| !! | CCGCTCTGACAGGGGTGCTT+TGG | + | chr2_3:11050884-11050903 | None:intergenic | 65.0% |
| GGCAGCGTCAAAGGCTCGCA+GGG | + | chr2_3:11051294-11051313 | None:intergenic | 65.0% | |
| GGAAGAAGGGTGAGCCAGGG+AGG | - | chr2_3:11055120-11055139 | Msa0278130:CDS | 65.0% | |
| CGGCAGCGTCAAAGGCTCGC+AGG | + | chr2_3:11051295-11051314 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 11050703 | 11055716 | 11050703 | ID=Msa0278130;Name=Msa0278130 |
| chr2_3 | mRNA | 11050703 | 11055716 | 11050703 | ID=Msa0278130-mRNA-1;Parent=Msa0278130;Name=Msa0278130-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|6|0|368 |
| chr2_3 | exon | 11055303 | 11055716 | 11055303 | ID=Msa0278130-mRNA-1:exon:4905;Parent=Msa0278130-mRNA-1 |
| chr2_3 | exon | 11054962 | 11055183 | 11054962 | ID=Msa0278130-mRNA-1:exon:4904;Parent=Msa0278130-mRNA-1 |
| chr2_3 | exon | 11054176 | 11054288 | 11054176 | ID=Msa0278130-mRNA-1:exon:4903;Parent=Msa0278130-mRNA-1 |
| chr2_3 | exon | 11053951 | 11054101 | 11053951 | ID=Msa0278130-mRNA-1:exon:4902;Parent=Msa0278130-mRNA-1 |
| chr2_3 | exon | 11052142 | 11052213 | 11052142 | ID=Msa0278130-mRNA-1:exon:4901;Parent=Msa0278130-mRNA-1 |
| chr2_3 | exon | 11050703 | 11050837 | 11050703 | ID=Msa0278130-mRNA-1:exon:4900;Parent=Msa0278130-mRNA-1 |
| chr2_3 | CDS | 11055303 | 11055716 | 11055303 | ID=Msa0278130-mRNA-1:cds;Parent=Msa0278130-mRNA-1 |
| chr2_3 | CDS | 11054962 | 11055183 | 11054962 | ID=Msa0278130-mRNA-1:cds;Parent=Msa0278130-mRNA-1 |
| chr2_3 | CDS | 11054176 | 11054288 | 11054176 | ID=Msa0278130-mRNA-1:cds;Parent=Msa0278130-mRNA-1 |
| chr2_3 | CDS | 11053951 | 11054101 | 11053951 | ID=Msa0278130-mRNA-1:cds;Parent=Msa0278130-mRNA-1 |
| chr2_3 | CDS | 11052142 | 11052213 | 11052142 | ID=Msa0278130-mRNA-1:cds;Parent=Msa0278130-mRNA-1 |
| chr2_3 | CDS | 11050703 | 11050837 | 11050703 | ID=Msa0278130-mRNA-1:cds;Parent=Msa0278130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
