AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0280800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0280800 MtrunA17_Chr2g0294841 98.686 761 10 0 1 761 1 761 0.0 1585
Msa0280800 MtrunA17_Chr2g0276841 58.434 664 256 5 22 675 42 695 0.0 816
Msa0280800 MtrunA17_Chr1g0198761 41.888 752 408 10 2 745 3 733 0.0 590
Msa0280800 MtrunA17_Chr2g0290391 39.939 651 370 4 21 661 27 666 5.59e-167 498
Msa0280800 MtrunA17_Chr5g0431001 49.537 432 210 3 44 470 60 488 1.26e-145 436
Msa0280800 MtrunA17_Chr5g0448761 28.281 640 437 12 42 666 57 689 1.33e-79 271
Msa0280800 MtrunA17_Chr1g0202341 27.303 597 408 11 14 603 27 604 5.38e-67 234
Msa0280800 MtrunA17_Chr2g0329031 28.076 577 367 13 51 611 20 564 9.63e-66 232
Msa0280800 MtrunA17_Chr3g0080351 27.888 606 380 13 14 603 54 618 5.94e-65 232
Msa0280800 MtrunA17_Chr3g0082121 28.571 581 389 11 38 613 36 595 2.11e-62 222
Msa0280800 MtrunA17_Chr8g0363841 25.645 659 416 13 46 662 18 644 7.69e-61 217
Msa0280800 MtrunA17_Chr1g0207551 27.428 587 404 10 24 603 13 584 1.56e-59 216
Msa0280800 MtrunA17_Chr5g0441581 26.797 612 399 15 9 604 1 579 5.24e-59 213
Msa0280800 MtrunA17_Chr2g0287651 27.513 567 377 11 51 603 81 627 6.75e-59 215
Msa0280800 MtrunA17_Chr5g0440451 25.901 583 382 10 45 603 43 599 3.32e-55 204
Msa0280800 MtrunA17_Chr6g0458391 27.931 580 367 17 38 603 218 760 1.98e-54 201
Msa0280800 MtrunA17_Chr6g0458391 31.579 133 82 3 33 165 79 202 8.98e-12 68.9
Msa0280800 MtrunA17_Chr3g0118611 29.710 414 249 8 219 610 110 503 2.46e-53 197
Msa0280800 MtrunA17_Chr2g0324011 25.796 597 415 13 39 623 4 584 1.88e-52 192
Msa0280800 MtrunA17_Chr2g0296781 26.370 584 366 16 51 604 3 552 1.27e-51 192
Msa0280800 MtrunA17_Chr5g0448511 29.491 373 257 4 236 603 21 392 4.94e-51 187
Msa0280800 MtrunA17_Chr2g0287061 26.003 573 365 12 38 603 176 696 4.92e-50 188
Msa0280800 MtrunA17_Chr1g0203051 24.382 607 408 15 10 595 45 621 1.01e-48 182
Msa0280800 MtrunA17_Chr1g0203721 25.729 583 390 13 41 603 59 618 1.43e-48 184
Msa0280800 MtrunA17_Chr6g0477261 27.540 443 306 9 174 604 2 441 3.03e-47 178
Msa0280800 MtrunA17_Chr1g0196541 23.171 656 429 15 51 680 3 609 2.93e-43 167
Msa0280800 MtrunA17_Chr2g0291581 23.826 575 393 10 45 603 71 616 3.01e-38 152
Msa0280800 MtrunA17_Chr2g0291591 24.908 546 353 15 36 557 55 567 1.44e-34 139
Msa0280800 MtrunA17_Chr1g0164591 27.628 333 200 5 130 446 1 308 6.98e-33 129
Msa0280800 MtrunA17_Chr3g0081281 54.839 93 42 0 191 283 1 93 7.76e-30 113
Msa0280800 MtrunA17_Chr7g0258861 27.119 295 201 7 39 329 4 288 1.46e-22 99.4
Msa0280800 MtrunA17_Chr1g0171741 31.638 177 99 8 11 173 86 254 8.92e-13 69.3
Msa0280800 MtrunA17_Chr7g0233911 36.364 110 63 3 45 154 34 136 2.33e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0280800 AT1G10240.2 57.727 660 274 3 18 677 21 675 0.0 816
Msa0280800 AT1G10240.1 57.727 660 274 3 18 677 21 675 0.0 816
Msa0280800 AT5G28530.3 40.491 652 353 9 26 662 39 670 6.45e-164 490
Msa0280800 AT5G28530.2 40.491 652 353 9 26 662 39 670 6.45e-164 490
Msa0280800 AT5G28530.1 40.031 652 360 8 26 662 39 674 8.50e-164 489
Msa0280800 AT5G28530.5 37.072 642 326 10 26 662 39 607 8.86e-130 399
Msa0280800 AT5G28530.4 36.604 642 333 9 26 662 39 611 1.68e-129 399
Msa0280800 AT4G38180.1 30.729 576 385 9 41 610 69 636 1.15e-82 280
Msa0280800 AT4G15090.1 26.791 642 446 12 19 650 25 652 2.58e-63 227
Msa0280800 AT4G15090.5 26.791 642 446 12 19 650 25 652 2.58e-63 227
Msa0280800 AT4G15090.3 26.791 642 446 12 19 650 25 652 2.58e-63 227
Msa0280800 AT4G15090.2 26.791 642 446 12 19 650 25 652 2.58e-63 227
Msa0280800 AT4G15090.4 26.791 642 446 12 19 650 25 652 2.58e-63 227
Msa0280800 AT3G22170.2 25.509 639 409 17 22 628 33 636 1.53e-60 219
Msa0280800 AT3G22170.1 25.509 639 409 17 22 628 33 636 1.53e-60 219
Msa0280800 AT1G76320.3 27.353 563 373 10 51 603 3 539 2.22e-56 205
Msa0280800 AT1G76320.2 27.353 563 373 10 51 603 3 539 3.62e-56 205
Msa0280800 AT1G76320.1 27.353 563 373 10 51 603 3 539 4.30e-56 205
Msa0280800 AT1G76320.4 27.353 563 373 10 51 603 3 539 4.30e-56 205
Msa0280800 AT2G27110.2 26.403 606 373 17 11 603 29 574 1.44e-51 194
Msa0280800 AT2G27110.1 26.403 606 373 17 11 603 29 574 1.44e-51 194
Msa0280800 AT4G19990.7 25.958 574 364 11 48 603 38 568 1.89e-48 183
Msa0280800 AT4G19990.3 25.958 574 364 11 48 603 24 554 2.02e-48 183
Msa0280800 AT4G19990.4 25.958 574 364 11 48 603 24 554 2.02e-48 183
Msa0280800 AT4G19990.5 25.958 574 364 11 48 603 24 554 2.14e-48 183
Msa0280800 AT4G19990.6 25.958 574 364 11 48 603 24 554 3.91e-48 182
Msa0280800 AT4G19990.2 25.958 574 364 11 48 603 24 554 3.91e-48 182
Msa0280800 AT2G27110.3 29.765 383 259 7 227 603 51 429 6.42e-47 178
Msa0280800 AT1G52520.1 26.019 638 395 19 45 648 85 679 2.87e-46 176
Msa0280800 AT3G06250.2 26.990 578 335 18 45 603 190 699 5.65e-46 176
Msa0280800 AT3G06250.1 26.990 578 335 18 45 603 190 699 5.65e-46 176
Msa0280800 AT3G06250.3 26.990 578 335 18 45 603 190 699 5.65e-46 176
Msa0280800 AT1G80010.1 25.763 590 381 16 45 604 95 657 3.27e-43 167
Msa0280800 AT5G18960.2 25.220 567 362 15 45 603 211 723 7.52e-43 167
Msa0280800 AT5G18960.1 25.220 567 362 15 45 603 211 723 7.52e-43 167
Msa0280800 AT2G32250.5 23.768 568 369 13 48 607 41 552 1.76e-42 166
Msa0280800 AT4G19990.1 25.660 530 334 10 92 603 10 497 1.89e-42 165
Msa0280800 AT2G32250.2 23.768 568 369 13 48 607 41 552 2.29e-42 166
Msa0280800 AT2G32250.4 23.768 568 369 13 48 607 41 552 2.29e-42 166
Msa0280800 AT2G32250.6 23.768 568 369 13 48 607 41 552 2.38e-42 166
Msa0280800 AT2G32250.1 23.768 568 369 13 48 607 41 552 2.38e-42 166
Msa0280800 AT2G32250.3 23.768 568 369 13 48 607 41 552 2.38e-42 166
Msa0280800 AT2G32250.7 23.717 565 367 13 51 607 3 511 6.69e-42 164
Msa0280800 AT2G32250.8 23.717 565 367 13 51 607 3 511 7.18e-42 164
Msa0280800 AT4G38170.1 27.822 381 260 7 231 603 21 394 1.74e-41 160
Msa0280800 AT3G07500.1 26.484 219 142 7 15 225 3 210 1.26e-11 65.5

Find 181 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAAGCAAATGCATTATT+TGG 0.110665 2_3:+15813043 Msa0280800:three_prime_UTR
CATCTTCAGAAGGTTTATTT+TGG 0.139353 2_3:-15809142 None:intergenic
TCCAAATATTGTATCCTTTC+AGG 0.144098 2_3:-15812603 None:intergenic
ATGACATGCTGTTGGGAATT+TGG 0.166402 2_3:+15809708 Msa0280800:CDS
ATTCAATCATATGAGGTATT+TGG 0.211487 2_3:+15809644 Msa0280800:CDS
GTTCCATCGGCTCTACAATT+TGG 0.214855 2_3:+15811797 Msa0280800:CDS
ACCTCAATATGCATCCTTTC+TGG 0.234586 2_3:+15812323 Msa0280800:CDS
GATACAATATTTGGAATCTT+TGG 0.243804 2_3:+15812611 Msa0280800:CDS
GCCTGAAAGGATACAATATT+TGG 0.244750 2_3:+15812602 Msa0280800:CDS
TCACTTCAACTGTATGAAAT+TGG 0.252951 2_3:+15807798 Msa0280800:five_prime_UTR
TATACTCATTAAGGACATTC+TGG 0.255249 2_3:+15811901 Msa0280800:CDS
TCACATTATGCAGGCTTTCT+TGG 0.257492 2_3:+15811593 Msa0280800:intron
TTTGGTTTCAACACTTCTAA+TGG 0.258812 2_3:+15812629 Msa0280800:CDS
CAAAAGGCATGTTTACTTTC+GGG 0.259449 2_3:-15811696 None:intergenic
GTGTTAGAATCATCCGAAAA+TGG 0.272557 2_3:+15808864 Msa0280800:CDS
CTTGACAGAATTGTTTCTTC+TGG 0.282713 2_3:-15808930 None:intergenic
GTCCCTGAATGGCGTGTTAC+TGG 0.284993 2_3:+15809254 Msa0280800:CDS
AAGGCAAATGTTAAGATTAA+TGG 0.285271 2_3:+15809403 Msa0280800:CDS
TGCTAGTTGCGCCATGAAAA+TGG 0.292848 2_3:-15812572 None:intergenic
TTGAGGCGATATTTCTTTGC+AGG 0.296991 2_3:+15811936 Msa0280800:CDS
ACAAATCTTTGACCAATAAA+AGG 0.311831 2_3:-15808975 None:intergenic
CACATTATGCAGGCTTTCTT+GGG 0.312370 2_3:+15811594 Msa0280800:intron
CCGTTGGATGAAAACGTTAA+TGG 0.319103 2_3:-15811985 None:intergenic
GTACATGCGTATTGTGAAAA+AGG 0.319270 2_3:+15809220 Msa0280800:CDS
TGGCTTGGATTGGACAATAA+TGG 0.319336 2_3:+15809728 Msa0280800:CDS
ACAAAAGGCATGTTTACTTT+CGG 0.321090 2_3:-15811697 None:intergenic
ATGGAGGTTGCAAAGTGTTT+TGG 0.321516 2_3:+15812388 Msa0280800:CDS
TTATTAGCCTATACTCATTA+AGG 0.323374 2_3:+15811892 Msa0280800:CDS
CCTCATGATTCCATGGCTTT+AGG 0.327738 2_3:+15812843 Msa0280800:CDS
AACGATTCCGACGCGATTTA+CGG 0.329179 2_3:+15807725 Msa0280800:five_prime_UTR
CAACTTATGTATCGTTGAAT+TGG 0.338021 2_3:-15813109 None:intergenic
ACAAAGCAAATGCATTATTT+GGG 0.339023 2_3:+15813044 Msa0280800:three_prime_UTR
CTCACATCTATCTCTGTAAA+AGG 0.340205 2_3:-15809458 None:intergenic
AGGCAAATGGTGGATAAATA+TGG 0.340475 2_3:+15811849 Msa0280800:CDS
AACCACAGCGAGATGATTTA+CGG 0.342181 2_3:-15809190 None:intergenic
AAACCAGTAACACGCCATTC+AGG 0.361653 2_3:-15809257 None:intergenic
GGATGATTCTAACACAAAAC+TGG 0.371625 2_3:-15808856 None:intergenic
TCACCATTATGTGCACAATA+TGG 0.372426 2_3:+15812930 Msa0280800:CDS
CTTTAGCAAACATGCATATA+CGG 0.380754 2_3:-15809367 None:intergenic
GATACTGATGAAATGATTCA+TGG 0.382834 2_3:+15812804 Msa0280800:CDS
TTCTCTCCAAGTTCTCTGAT+TGG 0.385450 2_3:+15811730 Msa0280800:CDS
CTTTAGTTGCGCCCTTCTGC+GGG 0.388321 2_3:+15809763 Msa0280800:CDS
GTGCTGCAACTAGCTCTTCC+TGG 0.388829 2_3:-15812302 None:intergenic
GGCCAACCCCATCTTTCCCT+CGG 0.389341 2_3:-15809073 None:intergenic
GTCAGTACTAAAAGCAAAGT+TGG 0.401556 2_3:-15808814 None:intergenic
ATAACAAAATTAATTCAAAT+AGG 0.408107 2_3:-15813160 None:intergenic
CTCTTATCATCAGGAGATAT+CGG 0.409413 2_3:-15809344 None:intergenic
CACCGCACCCGAGGGAAAGA+TGG 0.410004 2_3:+15809065 Msa0280800:CDS
CAAAATAAACCTTCTGAAGA+TGG 0.410862 2_3:+15809143 Msa0280800:CDS
GTTGGGAATTTGGCTTGGAT+TGG 0.415439 2_3:+15809718 Msa0280800:CDS
TCAAGATAGATAATAATAAC+AGG 0.416672 2_3:+15809588 Msa0280800:CDS
CAGAAAGTCTGCTTGAAAAC+AGG 0.419908 2_3:+15812222 Msa0280800:CDS
TGATCAGTCAGTATTGTTTG+TGG 0.423171 2_3:-15811636 None:intergenic
TGGATCTGATTGCTCAATAA+TGG 0.423232 2_3:+15812959 Msa0280800:CDS
AGATTAATGGAGCTAGAAAA+AGG 0.423796 2_3:+15809416 Msa0280800:CDS
TTGAATAAGACGCACCTCAT+TGG 0.427145 2_3:-15809312 None:intergenic
AATATGAGTGAAGATGCATT+AGG 0.432322 2_3:+15812990 Msa0280800:CDS
AATTCCCAACAGCATGTCAT+AGG 0.437999 2_3:-15809705 None:intergenic
TGGAGTTTGCTCAAGGCATA+AGG 0.440065 2_3:-15812282 None:intergenic
ATGCTGTTGGGAATTTGGCT+TGG 0.440367 2_3:+15809713 Msa0280800:CDS
AGATCTGCTGCAAGACAATT+CGG 0.450376 2_3:-15807771 None:intergenic
ATATGCATGTTTGCTAAAGC+TGG 0.454030 2_3:+15809371 Msa0280800:CDS
TCATCAGTATCTTCTACCTC+TGG 0.460431 2_3:-15812792 None:intergenic
AAGAAATATCGCCTCAAGAA+TGG 0.462464 2_3:-15811930 None:intergenic
GGGAAAGATGGGGTTGGCCG+AGG 0.467224 2_3:+15809077 Msa0280800:CDS
CTTATGTATCGTTGAATTGG+AGG 0.467458 2_3:-15813106 None:intergenic
CCGATCCGATGGCGAAGCAT+TGG 0.468854 2_3:+15812534 Msa0280800:CDS
ACACGCAGCAGTGAACTTCC+CGG 0.472012 2_3:+15807700 Msa0280800:five_prime_UTR
CATATACGGCTCTTATCATC+AGG 0.473122 2_3:-15809353 None:intergenic
ATATGAGTGAAGATGCATTA+GGG 0.474188 2_3:+15812991 Msa0280800:CDS
GAGAATATGCCATATACAAA+AGG 0.474322 2_3:-15811712 None:intergenic
GCTTTAGTTGCGCCCTTCTG+CGG 0.475590 2_3:+15809762 Msa0280800:CDS
AAAATAAACCTTCTGAAGAT+GGG 0.478175 2_3:+15809144 Msa0280800:CDS
CGGATCGGTAAATATTGATC+CGG 0.479172 2_3:-15812519 None:intergenic
CTCATCAATTCAATCATATG+AGG 0.479395 2_3:+15809637 Msa0280800:CDS
ACCGCACCCGAGGGAAAGAT+GGG 0.481862 2_3:+15809066 Msa0280800:CDS
TGTCCATATTGTGCACATAA+TGG 0.485930 2_3:-15812933 None:intergenic
GTGGCAGCATGGGATTCTAT+AGG 0.487656 2_3:-15812249 None:intergenic
ATAAAACCAATCAGAGAACT+TGG 0.489580 2_3:-15811736 None:intergenic
CTTGGGCTTCATGAAAGGAA+AGG 0.491097 2_3:+15811611 Msa0280800:CDS
ATACTCATTAAGGACATTCT+GGG 0.491639 2_3:+15811902 Msa0280800:CDS
ACTGAGCATCATCGTCAAGC+TGG 0.496896 2_3:+15807673 Msa0280800:five_prime_UTR
GCCAACCCCATCTTTCCCTC+GGG 0.498859 2_3:-15809072 None:intergenic
CCCCATCTTTCCCTCGGGTG+CGG 0.504235 2_3:-15809067 None:intergenic
TTATGCCTTGAGCAAACTCC+AGG 0.504552 2_3:+15812284 Msa0280800:CDS
TCGGCTCTACAATTTGGAAA+TGG 0.504763 2_3:+15811803 Msa0280800:CDS
TGCTTGTGACCAAGTTTCAA+TGG 0.504988 2_3:+15812683 Msa0280800:CDS
GCTTTCTTGGGCTTCATGAA+AGG 0.511793 2_3:+15811606 Msa0280800:CDS
GAGGCCTATGACATGCTGTT+GGG 0.513583 2_3:+15809701 Msa0280800:CDS
CATGGCTTTAGGCAAGCTAA+AGG 0.513686 2_3:+15812854 Msa0280800:CDS
TGAAGAAAGCTGGAGGCAAA+TGG 0.514494 2_3:+15811836 Msa0280800:CDS
AAGGCGTTCCTCGGTTTCAA+CGG 0.516469 2_3:-15812655 None:intergenic
CTCTTCCTGGAGTTTGCTCA+AGG 0.516928 2_3:-15812289 None:intergenic
AACCAGTAACACGCCATTCA+GGG 0.519550 2_3:-15809256 None:intergenic
TGCAAATCCTCATGATTCCA+TGG 0.519849 2_3:+15812836 Msa0280800:CDS
CTTTAGCTTGCCTAAAGCCA+TGG 0.519923 2_3:-15812853 None:intergenic
AGAATGTCCTTAATGAGTAT+AGG 0.523345 2_3:-15811899 None:intergenic
GAGTACATTGCATGGTCCTA+CGG 0.523416 2_3:+15809614 Msa0280800:CDS
AGCAACATCAAGGCGTTCCT+CGG 0.524644 2_3:-15812664 None:intergenic
AAGGAGAGAAGGGCAAGAGA+TGG 0.526646 2_3:+15812873 Msa0280800:CDS
GCATCCTTTCTGGTTGATGA+AGG 0.529559 2_3:+15812333 Msa0280800:CDS
TCAGTACTAAAAGCAAAGTT+GGG 0.536260 2_3:-15808813 None:intergenic
CTAGCAGGGATCAGCCTGAA+AGG 0.537919 2_3:+15812589 Msa0280800:CDS
AAATGGCACAGATTTGTCTC+AGG 0.538047 2_3:+15808881 Msa0280800:CDS
ATTTACGCCATGTGATGACC+TGG 0.539389 2_3:-15812730 None:intergenic
AACCTCCATCGGTCTGAGAA+TGG 0.539487 2_3:-15812374 None:intergenic
AAACACTTTGCAACCTCCAT+CGG 0.539933 2_3:-15812385 None:intergenic
GGACTCGGTCTGACATGTAC+TGG 0.541636 2_3:-15811964 None:intergenic
GGCATAAGGAGTAAGTATAG+TGG 0.542397 2_3:-15812268 None:intergenic
AGAGGCCTATGACATGCTGT+TGG 0.543489 2_3:+15809700 Msa0280800:CDS
CAAAGCAAATGCATTATTTG+GGG 0.544923 2_3:+15813045 Msa0280800:three_prime_UTR
CAGTATCTTCTACCTCTGGC+AGG 0.547423 2_3:-15812788 None:intergenic
TAGGCAAGCTAAAGGAGAGA+AGG 0.550540 2_3:+15812862 Msa0280800:CDS
TCTTGCATTTAGTTATGCAT+CGG 0.553812 2_3:+15812755 Msa0280800:CDS
ATCAATATTTACCGATCCGA+TGG 0.556315 2_3:+15812523 Msa0280800:CDS
ACCAGAAAGGATGCATATTG+AGG 0.558654 2_3:-15812324 None:intergenic
AGTAAGTATAGTGGCAGCAT+GGG 0.558789 2_3:-15812259 None:intergenic
GCATACTTTCATCCCGCAGA+AGG 0.560022 2_3:-15809775 None:intergenic
CTAAAGCTGGAATGTCGGTA+AGG 0.564431 2_3:+15809384 Msa0280800:CDS
GAGTAAGTATAGTGGCAGCA+TGG 0.565564 2_3:-15812260 None:intergenic
GTGATAGCACCATTGAAACT+TGG 0.565620 2_3:-15812692 None:intergenic
AGTGGAAAGCTGAGTTCCAT+CGG 0.569331 2_3:+15811784 Msa0280800:CDS
CTTGGTCACAAGCAACATCA+AGG 0.570174 2_3:-15812674 None:intergenic
TGTGCACAATATGGACATGA+TGG 0.571985 2_3:+15812939 Msa0280800:CDS
CCAATGCTTCGCCATCGGAT+CGG 0.572305 2_3:-15812534 None:intergenic
TGAGGTATTTGGTGATGCTG+TGG 0.573633 2_3:+15809655 Msa0280800:CDS
AGGCAAGCTAAAGGAGAGAA+GGG 0.573940 2_3:+15812863 Msa0280800:CDS
TGGATATGATTCTATGAACA+AGG 0.575281 2_3:+15807818 Msa0280800:five_prime_UTR
GCTCTACAATTTGGAAATGG+TGG 0.580387 2_3:+15811806 Msa0280800:CDS
TGTAGTGAATAGAAGTAACT+AGG 0.580877 2_3:+15813018 Msa0280800:exon
ACAACCTTCATCAACCAGAA+AGG 0.583485 2_3:-15812337 None:intergenic
TTGGGTCGCAATACGATGAG+TGG 0.584461 2_3:+15811766 Msa0280800:CDS
TCTGGGCTTTACCATTCTTG+AGG 0.584691 2_3:+15811919 Msa0280800:CDS
TTTCCAAATTGTAGAGCCGA+TGG 0.585557 2_3:-15811800 None:intergenic
GAGCAAAGCAAAAGATGCAA+AGG 0.586020 2_3:+15812193 Msa0280800:CDS
CAGCTGATGTGCTCTTGACA+AGG 0.588190 2_3:-15812414 None:intergenic
AATCCCTCCTCGTTACTCCT+CGG 0.588500 2_3:-15809094 None:intergenic
ACAGACCAATGCTTCGCCAT+CGG 0.588693 2_3:-15812539 None:intergenic
CATACTTTCATCCCGCAGAA+GGG 0.593580 2_3:-15809774 None:intergenic
AAATAAACCTTCTGAAGATG+GGG 0.596801 2_3:+15809145 Msa0280800:CDS
GTCATAGGCCTCTACTCGGT+AGG 0.599446 2_3:-15809690 None:intergenic
CACGTGTTAAAACTCTTCCC+AGG 0.602561 2_3:+15812712 Msa0280800:CDS
GCATGTCATAGGCCTCTACT+CGG 0.603797 2_3:-15809694 None:intergenic
ACCCGAGGGAAAGATGGGGT+TGG 0.604145 2_3:+15809071 Msa0280800:CDS
ATTGTGCACTCAAGAACCGT+TGG 0.604864 2_3:-15812001 None:intergenic
TGATACAACCTACCGAGTAG+AGG 0.608589 2_3:+15809682 Msa0280800:CDS
GGGGAGGAGGAAAAGCGCAA+AGG 0.609723 2_3:+15809165 Msa0280800:CDS
GTTTGCTAAAGCTGGAATGT+CGG 0.610570 2_3:+15809379 Msa0280800:CDS
TTTCATACAGTTGAAGTGAG+AGG 0.611594 2_3:-15807794 None:intergenic
TGCCTGAAAACTCAAATAGA+CGG 0.614950 2_3:-15812443 None:intergenic
GGATCGGTAAATATTGATCC+GGG 0.615359 2_3:-15812518 None:intergenic
CACCATTCTCAGACCGATGG+AGG 0.619807 2_3:+15812372 Msa0280800:CDS
GGATGACATTGGCACTGTCG+AGG 0.620402 2_3:+15808902 Msa0280800:CDS
TGATTGAATTGATGAGCCGT+AGG 0.623124 2_3:-15809630 None:intergenic
TAAGTTGTCTACCACTCTTG+TGG 0.623469 2_3:+15813125 Msa0280800:three_prime_UTR
AAAGCAAATGCATTATTTGG+GGG 0.625057 2_3:+15813046 Msa0280800:three_prime_UTR
TGGCCGAGGAGTAACGAGGA+GGG 0.628175 2_3:+15809091 Msa0280800:CDS
AATGGAATCCGTTGAAACCG+AGG 0.632410 2_3:+15812647 Msa0280800:CDS
GATGAAAACGTTAATGGACT+CGG 0.633126 2_3:-15811979 None:intergenic
ATTAGACGACACCGCACCCG+AGG 0.637401 2_3:+15809056 Msa0280800:CDS
AGACACCATTCTCAGACCGA+TGG 0.638459 2_3:+15812369 Msa0280800:CDS
TTGGCCGAGGAGTAACGAGG+AGG 0.640151 2_3:+15809090 Msa0280800:CDS
CCTAAAGCCATGGAATCATG+AGG 0.642544 2_3:-15812843 None:intergenic
ACTGACAGCAGAATGTCAGA+AGG 0.645913 2_3:+15808831 Msa0280800:exon
GATTTGTCTCAGGATGACAT+TGG 0.649568 2_3:+15808891 Msa0280800:CDS
AGAAAGCTGGAGGCAAATGG+TGG 0.650737 2_3:+15811839 Msa0280800:CDS
ACAGGCTCGAGTACATTGCA+TGG 0.652102 2_3:+15809606 Msa0280800:CDS
TACTGACTGATCATAACACA+TGG 0.653234 2_3:+15811646 Msa0280800:CDS
TGAGTTGTTAAAATCCAATG+AGG 0.655034 2_3:+15809298 Msa0280800:CDS
TTTGACCAATAAAAGGAACA+AGG 0.658851 2_3:-15808968 None:intergenic
TTGATATTAGTAGAAAACGT+AGG 0.664945 2_3:+15812898 Msa0280800:CDS
ATGGCGGCCGTAAATCGCGT+CGG 0.672590 2_3:-15807732 None:intergenic
ACTCTTCCCAGGTCATCACA+TGG 0.672595 2_3:+15812723 Msa0280800:CDS
TTTACGCCATGTGATGACCT+GGG 0.676760 2_3:-15812729 None:intergenic
AATAAACCTTCTGAAGATGG+GGG 0.678235 2_3:+15809146 Msa0280800:CDS
TTAGACGACACCGCACCCGA+GGG 0.686513 2_3:+15809057 Msa0280800:CDS
TTTGGGGAAATCCTCCGCGG+TGG 0.687568 2_3:-15809124 None:intergenic
AACCGTAAATCATCTCGCTG+TGG 0.688131 2_3:+15809188 Msa0280800:CDS
GGATTCATTGATCCTGCCAG+AGG 0.692463 2_3:+15812776 Msa0280800:CDS
GGGTTGGCCGAGGAGTAACG+AGG 0.708315 2_3:+15809087 Msa0280800:CDS
CCGCACCCGAGGGAAAGATG+GGG 0.712775 2_3:+15809067 Msa0280800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATCTTATTTTTAAATTTT+AGG + chr2_3:15810495-15810514 Msa0280800:intron 10.0%
!!! GATCTTATTTTTAAATTTTA+GGG + chr2_3:15810496-15810515 Msa0280800:intron 10.0%
!!! ATCTTATTTTTAAATTTTAG+GGG + chr2_3:15810497-15810516 Msa0280800:intron 10.0%
!! TAGTAAATTATAGTTAATTA+TGG - chr2_3:15812136-15812155 None:intergenic 10.0%
!! ATAACAAAATTAATTCAAAT+AGG - chr2_3:15813163-15813182 None:intergenic 10.0%
!! TAAGATGAAATTAATAAAGT+GGG - chr2_3:15807857-15807876 None:intergenic 15.0%
!! TTAAGATGAAATTAATAAAG+TGG - chr2_3:15807858-15807877 None:intergenic 15.0%
!!! CATTTTTTTTTTAGTATTCA+GGG + chr2_3:15807905-15807924 Msa0280800:intron 15.0%
!!! GTGTATGTTATTTAATAATT+GGG + chr2_3:15808038-15808057 Msa0280800:intron 15.0%
!!! TGTATGTTATTTAATAATTG+GGG + chr2_3:15808039-15808058 Msa0280800:intron 15.0%
!! AAGTAATTTGATTCTTTATT+TGG + chr2_3:15808621-15808640 Msa0280800:intron 15.0%
!!! GATATGGATTAAATTTTAAA+CGG + chr2_3:15810085-15810104 Msa0280800:intron 15.0%
!!! TCTTTTAATATATAGATGAA+GGG - chr2_3:15810199-15810218 None:intergenic 15.0%
!!! ATCTATTTACTAAATTTTCA+TGG + chr2_3:15810413-15810432 Msa0280800:intron 15.0%
!! TAAAGTTTAATCTTGAATAA+TGG + chr2_3:15810623-15810642 Msa0280800:intron 15.0%
!!! TGAATAATGGATTTTTTTTT+TGG + chr2_3:15810636-15810655 Msa0280800:intron 15.0%
!!! AATTTTGCCTAATAAATATT+TGG + chr2_3:15811024-15811043 Msa0280800:intron 15.0%
!!! ATTTTGCCTAATAAATATTT+GGG + chr2_3:15811025-15811044 Msa0280800:intron 15.0%
!!! AAAATTTGCTATACAAATAT+TGG - chr2_3:15811519-15811538 None:intergenic 15.0%
!! AATTAACTATAATTTACTAC+AGG + chr2_3:15812137-15812156 Msa0280800:intron 15.0%
!! AAATTAATAAAGTGGGAAAT+GGG - chr2_3:15807850-15807869 None:intergenic 20.0%
!!! GCATTTTTTTTTTAGTATTC+AGG + chr2_3:15807904-15807923 Msa0280800:intron 20.0%
!!! CGTGTATGTTATTTAATAAT+TGG + chr2_3:15808037-15808056 Msa0280800:intron 20.0%
!! AATGTGATATAAGACTTAAA+AGG - chr2_3:15808743-15808762 None:intergenic 20.0%
!! TCAAGATAGATAATAATAAC+AGG + chr2_3:15809588-15809607 Msa0280800:CDS 20.0%
!! ATGCTATCATTAAAAAAGTA+AGG - chr2_3:15809994-15810013 None:intergenic 20.0%
!!! CTCTTTTAATATATAGATGA+AGG - chr2_3:15810200-15810219 None:intergenic 20.0%
!! AATAGATAACTAATTAGACA+AGG - chr2_3:15810400-15810419 None:intergenic 20.0%
!! AGGGGAAAAAAAATTAAAAA+AGG + chr2_3:15810515-15810534 Msa0280800:intron 20.0%
!! CTTAAACCCAAATATTTATT+AGG - chr2_3:15811034-15811053 None:intergenic 20.0%
!!! AAGAAACATATGAACTTTTA+TGG - chr2_3:15811164-15811183 None:intergenic 20.0%
!! TTAAAAAGTTCACATGTTTA+AGG - chr2_3:15811217-15811236 None:intergenic 20.0%
!! AACCAAGACATTTAAAAAAA+AGG - chr2_3:15811259-15811278 None:intergenic 20.0%
!!! ATTGGTTTTATTTACTTCTT+GGG + chr2_3:15811748-15811767 Msa0280800:CDS 20.0%
!! ATTTGCTCAAAAAAAAACAA+AGG - chr2_3:15812075-15812094 None:intergenic 20.0%
! AATTAATAAAGTGGGAAATG+GGG - chr2_3:15807849-15807868 None:intergenic 25.0%
! GAAATTAATAAAGTGGGAAA+TGG - chr2_3:15807851-15807870 None:intergenic 25.0%
!!! TTTTTTTTAGTATTCAGGGT+AGG + chr2_3:15807909-15807928 Msa0280800:intron 25.0%
!!! ATTTTCAATCGATTCAATGT+GGG - chr2_3:15808077-15808096 None:intergenic 25.0%
! TTGAATCGATTGAAAATGTT+CGG + chr2_3:15808080-15808099 Msa0280800:intron 25.0%
!!! TGGTCTAGTTTTTAAAACAT+TGG + chr2_3:15808469-15808488 Msa0280800:intron 25.0%
! AAATCTCAAAGTAGTTAGTT+AGG - chr2_3:15808543-15808562 None:intergenic 25.0%
!!! AACTAACTACTTTGAGATTT+TGG + chr2_3:15808543-15808562 Msa0280800:intron 25.0%
!!! ACTAACTACTTTGAGATTTT+GGG + chr2_3:15808544-15808563 Msa0280800:intron 25.0%
! GACTTAAAAGGTGAATTAAT+AGG - chr2_3:15808731-15808750 None:intergenic 25.0%
! ACAAATCTTTGACCAATAAA+AGG - chr2_3:15808978-15808997 None:intergenic 25.0%
!!! ATCTTCAGAAGGTTTATTTT+GGG - chr2_3:15809144-15809163 None:intergenic 25.0%
!! AAAATAAACCTTCTGAAGAT+GGG + chr2_3:15809144-15809163 Msa0280800:CDS 25.0%
!!! ATTTTAACAACTCATGATTG+TGG - chr2_3:15809292-15809311 None:intergenic 25.0%
! AAGGCAAATGTTAAGATTAA+TGG + chr2_3:15809403-15809422 Msa0280800:CDS 25.0%
!! ATTCAATCATATGAGGTATT+TGG + chr2_3:15809644-15809663 Msa0280800:CDS 25.0%
! ACAATACCATCATATCTTAT+CGG - chr2_3:15809954-15809973 None:intergenic 25.0%
! TATGTGGAAAAACCAAAAAT+GGG - chr2_3:15810143-15810162 None:intergenic 25.0%
! ATATGTGGAAAAACCAAAAA+TGG - chr2_3:15810144-15810163 None:intergenic 25.0%
! TTTGATCATATAAGCTATGA+TGG + chr2_3:15810718-15810737 Msa0280800:intron 25.0%
! TAGGAAGATAAAAACTACAA+TGG - chr2_3:15810808-15810827 None:intergenic 25.0%
!! TTTATCTTCCTATGATTTTC+AGG + chr2_3:15810816-15810835 Msa0280800:intron 25.0%
!! TTATCTTCCTATGATTTTCA+GGG + chr2_3:15810817-15810836 Msa0280800:intron 25.0%
! ACTTGAACAAAAAGACATAA+AGG + chr2_3:15810959-15810978 Msa0280800:intron 25.0%
! AAAGACATAAAGGACTAATA+CGG + chr2_3:15810969-15810988 Msa0280800:intron 25.0%
! GAAATAACTTAAAGGATGAT+AGG + chr2_3:15810998-15811017 Msa0280800:intron 25.0%
!! CATATGAACTTTTATGGTTT+TGG - chr2_3:15811158-15811177 None:intergenic 25.0%
!!! AAAAGGTCACATGTTTTTTT+TGG - chr2_3:15811242-15811261 None:intergenic 25.0%
!!! GACCTTTTTTTTAAATGTCT+TGG + chr2_3:15811254-15811273 Msa0280800:intron 25.0%
! TTACATGCATATGAAATTCA+AGG - chr2_3:15811330-15811349 None:intergenic 25.0%
!!! GATTGGTTTTATTTACTTCT+TGG + chr2_3:15811747-15811766 Msa0280800:CDS 25.0%
!! TTATTAGCCTATACTCATTA+AGG + chr2_3:15811892-15811911 Msa0280800:CDS 25.0%
! TAACTATAATTTACTACAGG+TGG + chr2_3:15812140-15812159 Msa0280800:intron 25.0%
!! TCTTCTTTTAACCATTTTCA+TGG + chr2_3:15812561-15812580 Msa0280800:CDS 25.0%
!! GATACAATATTTGGAATCTT+TGG + chr2_3:15812611-15812630 Msa0280800:CDS 25.0%
! TTGATATTAGTAGAAAACGT+AGG + chr2_3:15812898-15812917 Msa0280800:CDS 25.0%
! TACAAAGCAAATGCATTATT+TGG + chr2_3:15813043-15813062 Msa0280800:three_prime_UTR 25.0%
! ACAAAGCAAATGCATTATTT+GGG + chr2_3:15813044-15813063 Msa0280800:three_prime_UTR 25.0%
TCACTTCAACTGTATGAAAT+TGG + chr2_3:15807798-15807817 Msa0280800:five_prime_UTR 30.0%
TGGATATGATTCTATGAACA+AGG + chr2_3:15807818-15807837 Msa0280800:five_prime_UTR 30.0%
TAGTGATGAATTTCATCTCA+AGG + chr2_3:15807942-15807961 Msa0280800:intron 30.0%
AGTGATGAATTTCATCTCAA+GGG + chr2_3:15807943-15807962 Msa0280800:intron 30.0%
!! CATTTTCAATCGATTCAATG+TGG - chr2_3:15808078-15808097 None:intergenic 30.0%
!!! CAATGTTTTGAAAACCGAAT+TGG + chr2_3:15808169-15808188 Msa0280800:intron 30.0%
ATGATTCAACTGCATTAAAC+TGG + chr2_3:15808219-15808238 Msa0280800:intron 30.0%
TGATTCAACTGCATTAAACT+GGG + chr2_3:15808220-15808239 Msa0280800:intron 30.0%
!!! GTTTAGCTTTTTTCTTGGTA+TGG + chr2_3:15808327-15808346 Msa0280800:intron 30.0%
!!! TTTTTTCTTGGTATGGAGTT+TGG + chr2_3:15808334-15808353 Msa0280800:intron 30.0%
ATCTTGGATAAAACAATCCT+TGG - chr2_3:15808381-15808400 None:intergenic 30.0%
! TTTTATCCAAGATTCGAACT+CGG + chr2_3:15808388-15808407 Msa0280800:intron 30.0%
TCAGTACTAAAAGCAAAGTT+GGG - chr2_3:15808816-15808835 None:intergenic 30.0%
! GTTAACCTTGTTCCTTTTAT+TGG + chr2_3:15808963-15808982 Msa0280800:CDS 30.0%
TTTGACCAATAAAAGGAACA+AGG - chr2_3:15808971-15808990 None:intergenic 30.0%
! TGCAGTTTTGCTAAACAATT+TGG + chr2_3:15809026-15809045 Msa0280800:CDS 30.0%
!!! TCTTCAGAAGGTTTATTTTG+GGG - chr2_3:15809143-15809162 None:intergenic 30.0%
! CATCTTCAGAAGGTTTATTT+TGG - chr2_3:15809145-15809164 None:intergenic 30.0%
! CAAAATAAACCTTCTGAAGA+TGG + chr2_3:15809143-15809162 Msa0280800:CDS 30.0%
! AAATAAACCTTCTGAAGATG+GGG + chr2_3:15809145-15809164 Msa0280800:CDS 30.0%
TGAGTTGTTAAAATCCAATG+AGG + chr2_3:15809298-15809317 Msa0280800:CDS 30.0%
CTTTAGCAAACATGCATATA+CGG - chr2_3:15809370-15809389 None:intergenic 30.0%
AGATTAATGGAGCTAGAAAA+AGG + chr2_3:15809416-15809435 Msa0280800:CDS 30.0%
CTCATCAATTCAATCATATG+AGG + chr2_3:15809637-15809656 Msa0280800:CDS 30.0%
! TTTAAAGCCCATGAAAAAGA+CGG - chr2_3:15809800-15809819 None:intergenic 30.0%
TCAAATACAAGATTGTCAAG+TGG - chr2_3:15809855-15809874 None:intergenic 30.0%
CTTCTTGATTGCTTGATATT+TGG + chr2_3:15809875-15809894 Msa0280800:intron 30.0%
! TTTTGTCCGATAAGATATGA+TGG + chr2_3:15809945-15809964 Msa0280800:intron 30.0%
AGAATTGTAGAAAAGGTCAA+CGG - chr2_3:15810030-15810049 None:intergenic 30.0%
TGTAACGAGAATTGTAGAAA+AGG - chr2_3:15810037-15810056 None:intergenic 30.0%
TCGTTACAAAAACATCTACA+TGG + chr2_3:15810049-15810068 Msa0280800:intron 30.0%
AAAACCAAAAATGGGAAAGA+AGG - chr2_3:15810135-15810154 None:intergenic 30.0%
AAATCGAGTGAATTTAGTGA+GGG - chr2_3:15810336-15810355 None:intergenic 30.0%
AAAATCGAGTGAATTTAGTG+AGG - chr2_3:15810337-15810356 None:intergenic 30.0%
! TTTTTGTGTTGCAGATCATA+TGG + chr2_3:15810353-15810372 Msa0280800:intron 30.0%
!! AGATCATATGGTTCTGTTTT+AGG + chr2_3:15810365-15810384 Msa0280800:intron 30.0%
ACTTGATGTTGAAATCCTTT+GGG - chr2_3:15810474-15810493 None:intergenic 30.0%
GAAATTGGAACTACAACTAT+GGG - chr2_3:15810566-15810585 None:intergenic 30.0%
TGAAATTGGAACTACAACTA+TGG - chr2_3:15810567-15810586 None:intergenic 30.0%
!!! CCAAGAATGTGTTTTGAAAT+TGG - chr2_3:15810581-15810600 None:intergenic 30.0%
CCAATTTCAAAACACATTCT+TGG + chr2_3:15810578-15810597 Msa0280800:intron 30.0%
! GTGAAATTTTGTGACATGTA+TGG + chr2_3:15810600-15810619 Msa0280800:intron 30.0%
TTAGACTTATACTGAGAAGT+TGG + chr2_3:15810661-15810680 Msa0280800:intron 30.0%
TATGAAACCCTGAAAATCAT+AGG - chr2_3:15810827-15810846 None:intergenic 30.0%
!! ATGATTTTCAGGGTTTCATA+AGG + chr2_3:15810827-15810846 Msa0280800:intron 30.0%
CTGTTACTAAAATGTCTATG+TGG - chr2_3:15810906-15810925 None:intergenic 30.0%
!! CACATAGACATTTTAGTAAC+AGG + chr2_3:15810904-15810923 Msa0280800:intron 30.0%
GATCCACATATTATGAGTTA+GGG + chr2_3:15810932-15810951 Msa0280800:intron 30.0%
GGCACAATGAAATAACTTAA+AGG + chr2_3:15810990-15811009 Msa0280800:intron 30.0%
!! TTTAAATGTCTTGGTTTGTG+TGG + chr2_3:15811263-15811282 Msa0280800:intron 30.0%
ATTAGTGCCATAAAATACAC+CGG + chr2_3:15811373-15811392 Msa0280800:intron 30.0%
! TATTCTTCCGGTGTATTTTA+TGG - chr2_3:15811383-15811402 None:intergenic 30.0%
TCTTGTCTATTGAATCTAGT+AGG + chr2_3:15811413-15811432 Msa0280800:intron 30.0%
TCATCTTATTCACATTATGC+AGG + chr2_3:15811584-15811603 Msa0280800:intron 30.0%
! ACAAAAGGCATGTTTACTTT+CGG - chr2_3:15811700-15811719 None:intergenic 30.0%
! GTAAACATGCCTTTTGTATA+TGG + chr2_3:15811703-15811722 Msa0280800:CDS 30.0%
GAGAATATGCCATATACAAA+AGG - chr2_3:15811715-15811734 None:intergenic 30.0%
ATAAAACCAATCAGAGAACT+TGG - chr2_3:15811739-15811758 None:intergenic 30.0%
AGAATGTCCTTAATGAGTAT+AGG - chr2_3:15811902-15811921 None:intergenic 30.0%
TATACTCATTAAGGACATTC+TGG + chr2_3:15811901-15811920 Msa0280800:CDS 30.0%
ATACTCATTAAGGACATTCT+GGG + chr2_3:15811902-15811921 Msa0280800:CDS 30.0%
! TAATAACTGTTTTCACATCC+CGG + chr2_3:15812500-15812519 Msa0280800:CDS 30.0%
TCCAAATATTGTATCCTTTC+AGG - chr2_3:15812606-15812625 None:intergenic 30.0%
! TTTGGTTTCAACACTTCTAA+TGG + chr2_3:15812629-15812648 Msa0280800:CDS 30.0%
TCTTGCATTTAGTTATGCAT+CGG + chr2_3:15812755-15812774 Msa0280800:CDS 30.0%
GATACTGATGAAATGATTCA+TGG + chr2_3:15812804-15812823 Msa0280800:CDS 30.0%
AATATGAGTGAAGATGCATT+AGG + chr2_3:15812990-15813009 Msa0280800:CDS 30.0%
ATATGAGTGAAGATGCATTA+GGG + chr2_3:15812991-15813010 Msa0280800:CDS 30.0%
TGTAGTGAATAGAAGTAACT+AGG + chr2_3:15813018-15813037 Msa0280800:exon 30.0%
CAAAGCAAATGCATTATTTG+GGG + chr2_3:15813045-15813064 Msa0280800:three_prime_UTR 30.0%
AAAGCAAATGCATTATTTGG+GGG + chr2_3:15813046-15813065 Msa0280800:three_prime_UTR 30.0%
CAACTTATGTATCGTTGAAT+TGG - chr2_3:15813112-15813131 None:intergenic 30.0%
!!! AAGACAATTCGGTTTTGAAG+AGG - chr2_3:15807763-15807782 None:intergenic 35.0%
TTTCATACAGTTGAAGTGAG+AGG - chr2_3:15807797-15807816 None:intergenic 35.0%
! ATCGATTCAATGTGGGATTT+GGG - chr2_3:15808070-15808089 None:intergenic 35.0%
! AATCGATTCAATGTGGGATT+TGG - chr2_3:15808071-15808090 None:intergenic 35.0%
!!! GTTCGGTTTAGCTTTTTTCT+TGG + chr2_3:15808322-15808341 Msa0280800:intron 35.0%
TTTATCCAAGATTCGAACTC+GGG + chr2_3:15808389-15808408 Msa0280800:intron 35.0%
ACTGAGATAGTTACAGTACT+CGG - chr2_3:15808511-15808530 None:intergenic 35.0%
AAGTAGTTAGTTAGGACTAG+CGG - chr2_3:15808535-15808554 None:intergenic 35.0%
AGATGTTCAAACCTGAAAGA+CGG - chr2_3:15808789-15808808 None:intergenic 35.0%
GTCAGTACTAAAAGCAAAGT+TGG - chr2_3:15808817-15808836 None:intergenic 35.0%
GGATGATTCTAACACAAAAC+TGG - chr2_3:15808859-15808878 None:intergenic 35.0%
GTGTTAGAATCATCCGAAAA+TGG + chr2_3:15808864-15808883 Msa0280800:CDS 35.0%
!!! AGACAAATCTGTGCCATTTT+CGG - chr2_3:15808880-15808899 None:intergenic 35.0%
! CTTGACAGAATTGTTTCTTC+TGG - chr2_3:15808933-15808952 None:intergenic 35.0%
! AATAAACCTTCTGAAGATGG+GGG + chr2_3:15809146-15809165 Msa0280800:CDS 35.0%
GTACATGCGTATTGTGAAAA+AGG + chr2_3:15809220-15809239 Msa0280800:CDS 35.0%
CTCTTATCATCAGGAGATAT+CGG - chr2_3:15809347-15809366 None:intergenic 35.0%
! ATATGCATGTTTGCTAAAGC+TGG + chr2_3:15809371-15809390 Msa0280800:CDS 35.0%
!! CTAGAAAAAGGCATCAAACT+TGG + chr2_3:15809428-15809447 Msa0280800:CDS 35.0%
CTCACATCTATCTCTGTAAA+AGG - chr2_3:15809461-15809480 None:intergenic 35.0%
!! AAAGTATGCCGTCTTTTTCA+TGG + chr2_3:15809789-15809808 Msa0280800:CDS 35.0%
!! AAGTATGCCGTCTTTTTCAT+GGG + chr2_3:15809790-15809809 Msa0280800:CDS 35.0%
!! GTCTTTTTCATGGGCTTTAA+AGG + chr2_3:15809799-15809818 Msa0280800:CDS 35.0%
GTGGAAGTTGTAACAACATA+TGG - chr2_3:15809836-15809855 None:intergenic 35.0%
! TGATTGCTTGATATTTGGTG+TGG + chr2_3:15809880-15809899 Msa0280800:intron 35.0%
!! GATTGCTTGATATTTGGTGT+GGG + chr2_3:15809881-15809900 Msa0280800:intron 35.0%
GCAATAGCTAGTACTATTGT+GGG - chr2_3:15809922-15809941 None:intergenic 35.0%
AGCAATAGCTAGTACTATTG+TGG - chr2_3:15809923-15809942 None:intergenic 35.0%
! AATTTTAAACGGCGTTAACG+TGG + chr2_3:15810096-15810115 Msa0280800:intron 35.0%
AATGGGAAAGAAGGTGAAAT+GGG - chr2_3:15810126-15810145 None:intergenic 35.0%
AAATGGGAAAGAAGGTGAAA+TGG - chr2_3:15810127-15810146 None:intergenic 35.0%
! TTCACCTTCTTTCCCATTTT+TGG + chr2_3:15810128-15810147 Msa0280800:intron 35.0%
GGAAGATAGAAGAGAATATG+TGG - chr2_3:15810159-15810178 None:intergenic 35.0%
! AATCCTTTGGGTTTGAAGTT+GGG - chr2_3:15810462-15810481 None:intergenic 35.0%
! AAATCCTTTGGGTTTGAAGT+TGG - chr2_3:15810463-15810482 None:intergenic 35.0%
CACTTGATGTTGAAATCCTT+TGG - chr2_3:15810475-15810494 None:intergenic 35.0%
ATATAAGCTATGATGGCTTG+TGG + chr2_3:15810725-15810744 Msa0280800:intron 35.0%
AGGGTTTCATAAGGTGAAAT+GGG + chr2_3:15810836-15810855 Msa0280800:intron 35.0%
CGATCCACATATTATGAGTT+AGG + chr2_3:15810931-15810950 Msa0280800:intron 35.0%
GATCCCTAACTCATAATATG+TGG - chr2_3:15810938-15810957 None:intergenic 35.0%
TTCACATGTTTAAGGAGCAA+AGG - chr2_3:15811209-15811228 None:intergenic 35.0%
!! ATGCATGTAAAAAGCACTGT+TGG + chr2_3:15811340-15811359 Msa0280800:intron 35.0%
!! TGCATGTAAAAAGCACTGTT+GGG + chr2_3:15811341-15811360 Msa0280800:intron 35.0%
! GGTGTATTTTATGGCACTAA+TGG - chr2_3:15811374-15811393 None:intergenic 35.0%
!!! CGCACATTTTTTGTTTCCTA+GGG - chr2_3:15811443-15811462 None:intergenic 35.0%
!!! ACGCACATTTTTTGTTTCCT+AGG - chr2_3:15811444-15811463 None:intergenic 35.0%
TGATCAGTCAGTATTGTTTG+TGG - chr2_3:15811639-15811658 None:intergenic 35.0%
! TACTGACTGATCATAACACA+TGG + chr2_3:15811646-15811665 Msa0280800:CDS 35.0%
! CAAAAGGCATGTTTACTTTC+GGG - chr2_3:15811699-15811718 None:intergenic 35.0%
!! TGGAAGATTTTGAAGAAAGC+TGG + chr2_3:15811826-15811845 Msa0280800:CDS 35.0%
!! AAGATTTTGAAGAAAGCTGG+AGG + chr2_3:15811829-15811848 Msa0280800:CDS 35.0%
!! AGGCAAATGGTGGATAAATA+TGG + chr2_3:15811849-15811868 Msa0280800:CDS 35.0%
AAGAAATATCGCCTCAAGAA+TGG - chr2_3:15811933-15811952 None:intergenic 35.0%
!! GATGAAAACGTTAATGGACT+CGG - chr2_3:15811982-15812001 None:intergenic 35.0%
! CCATTAACGTTTTCATCCAA+CGG + chr2_3:15811985-15812004 Msa0280800:CDS 35.0%
!! ACTTGCTCTAAAAAACGTTC+TGG - chr2_3:15812032-15812051 None:intergenic 35.0%
!! TTTCCTGCAGCTTTGTTTAT+GGG + chr2_3:15812101-15812120 Msa0280800:intron 35.0%
TGCCTGAAAACTCAAATAGA+CGG - chr2_3:15812446-15812465 None:intergenic 35.0%
ATCAATATTTACCGATCCGA+TGG + chr2_3:15812523-15812542 Msa0280800:CDS 35.0%
GCCTGAAAGGATACAATATT+TGG + chr2_3:15812602-15812621 Msa0280800:CDS 35.0%
TCACCATTATGTGCACAATA+TGG + chr2_3:15812930-15812949 Msa0280800:CDS 35.0%
TGTCCATATTGTGCACATAA+TGG - chr2_3:15812936-15812955 None:intergenic 35.0%
TGGATCTGATTGCTCAATAA+TGG + chr2_3:15812959-15812978 Msa0280800:CDS 35.0%
CTTATGTATCGTTGAATTGG+AGG - chr2_3:15813109-15813128 None:intergenic 35.0%
! CTGAAATTTTTCCACAAGAG+TGG - chr2_3:15813139-15813158 None:intergenic 35.0%
CACTCTTGTGGAAAAATTTC+AGG + chr2_3:15813137-15813156 Msa0280800:three_prime_UTR 35.0%
!!! ACAATTCGGTTTTGAAGAGG+TGG - chr2_3:15807760-15807779 None:intergenic 40.0%
AGATCTGCTGCAAGACAATT+CGG - chr2_3:15807774-15807793 None:intergenic 40.0%
AACCGAATTGGACATTGAAC+TGG + chr2_3:15808181-15808200 Msa0280800:intron 40.0%
CACCAGTTCAATGTCCAATT+CGG - chr2_3:15808186-15808205 None:intergenic 40.0%
AATTGGACATTGAACTGGTG+AGG + chr2_3:15808186-15808205 Msa0280800:intron 40.0%
ATTGGACATTGAACTGGTGA+GGG + chr2_3:15808187-15808206 Msa0280800:intron 40.0%
ATTAAACTGGGACGAAACTG+CGG + chr2_3:15808232-15808251 Msa0280800:intron 40.0%
AACCGAATAGTAGATAGTGC+CGG + chr2_3:15808271-15808290 Msa0280800:intron 40.0%
AACCGGCACTATCTACTATT+CGG - chr2_3:15808276-15808295 None:intergenic 40.0%
CAACCAGTTAAACCATGAAC+CGG - chr2_3:15808293-15808312 None:intergenic 40.0%
GTTTAACTGGTTGAACCATC+TGG + chr2_3:15808300-15808319 Msa0280800:intron 40.0%
AAAAGCTAAACCGAACCAGA+TGG - chr2_3:15808318-15808337 None:intergenic 40.0%
CACTTAAGTAGAACTCGTTG+AGG - chr2_3:15808419-15808438 None:intergenic 40.0%
CTCAACGAGTTCTACTTAAG+TGG + chr2_3:15808417-15808436 Msa0280800:intron 40.0%
ATCACGTGAGCTTAATCACT+TGG + chr2_3:15808449-15808468 Msa0280800:intron 40.0%
! CTAGACTTGCTTTGTCTCTT+TGG + chr2_3:15808593-15808612 Msa0280800:intron 40.0%
GATGTTCAAACCTGAAAGAC+GGG - chr2_3:15808788-15808807 None:intergenic 40.0%
AAATGGCACAGATTTGTCTC+AGG + chr2_3:15808881-15808900 Msa0280800:CDS 40.0%
GATTTGTCTCAGGATGACAT+TGG + chr2_3:15808891-15808910 Msa0280800:CDS 40.0%
AACCACAGCGAGATGATTTA+CGG - chr2_3:15809193-15809212 None:intergenic 40.0%
!! CAGATTTTGATGTCCCTGAA+TGG + chr2_3:15809243-15809262 Msa0280800:CDS 40.0%
TTGAATAAGACGCACCTCAT+TGG - chr2_3:15809315-15809334 None:intergenic 40.0%
CATATACGGCTCTTATCATC+AGG - chr2_3:15809356-15809375 None:intergenic 40.0%
! GTTTGCTAAAGCTGGAATGT+CGG + chr2_3:15809379-15809398 Msa0280800:CDS 40.0%
!! GTTGCAGTCTTTTAGAAACG+TGG + chr2_3:15809487-15809506 Msa0280800:CDS 40.0%
TGATTGAATTGATGAGCCGT+AGG - chr2_3:15809633-15809652 None:intergenic 40.0%
AATTCCCAACAGCATGTCAT+AGG - chr2_3:15809708-15809727 None:intergenic 40.0%
ATGACATGCTGTTGGGAATT+TGG + chr2_3:15809708-15809727 Msa0280800:CDS 40.0%
! TGGCTTGGATTGGACAATAA+TGG + chr2_3:15809728-15809747 Msa0280800:CDS 40.0%
ATGGGAAAGAAGGTGAAATG+GGG - chr2_3:15810125-15810144 None:intergenic 40.0%
TATAGATGAAGGGCCTAATG+TGG - chr2_3:15810189-15810208 None:intergenic 40.0%
!! CAGCTGAAACCTTTGAAATC+CGG - chr2_3:15810769-15810788 None:intergenic 40.0%
CAGGGTTTCATAAGGTGAAA+TGG + chr2_3:15810835-15810854 Msa0280800:intron 40.0%
GGGTTTCATAAGGTGAAATG+GGG + chr2_3:15810837-15810856 Msa0280800:intron 40.0%
!! ATGCTACAGTAGAAGTGTCT+AGG + chr2_3:15811066-15811085 Msa0280800:intron 40.0%
!! ATGTCTTGGTTTGTGTGGAA+AGG + chr2_3:15811268-15811287 Msa0280800:intron 40.0%
!! GCATGTAAAAAGCACTGTTG+GGG + chr2_3:15811342-15811361 Msa0280800:intron 40.0%
!! AAAAAGCACTGTTGGGGTAT+CGG + chr2_3:15811348-15811367 Msa0280800:intron 40.0%
GAGTGAAGAGACTATTCTTC+CGG - chr2_3:15811395-15811414 None:intergenic 40.0%
TCACATTATGCAGGCTTTCT+TGG + chr2_3:15811593-15811612 Msa0280800:intron 40.0%
CACATTATGCAGGCTTTCTT+GGG + chr2_3:15811594-15811613 Msa0280800:intron 40.0%
TTCTCTCCAAGTTCTCTGAT+TGG + chr2_3:15811730-15811749 Msa0280800:CDS 40.0%
TTTCCAAATTGTAGAGCCGA+TGG - chr2_3:15811803-15811822 None:intergenic 40.0%
TCGGCTCTACAATTTGGAAA+TGG + chr2_3:15811803-15811822 Msa0280800:CDS 40.0%
GCTCTACAATTTGGAAATGG+TGG + chr2_3:15811806-15811825 Msa0280800:CDS 40.0%
TTGAGGCGATATTTCTTTGC+AGG + chr2_3:15811936-15811955 Msa0280800:CDS 40.0%
CCGTTGGATGAAAACGTTAA+TGG - chr2_3:15811988-15812007 None:intergenic 40.0%
!! CTTTCCTGCAGCTTTGTTTA+TGG + chr2_3:15812100-15812119 Msa0280800:intron 40.0%
ATACCCATAAACAAAGCTGC+AGG - chr2_3:15812107-15812126 None:intergenic 40.0%
!! GTTGATTTTAATGACCGAGC+CGG + chr2_3:15812171-15812190 Msa0280800:CDS 40.0%
! TTGCATCTTTTGCTTTGCTC+CGG - chr2_3:15812193-15812212 None:intergenic 40.0%
GAGCAAAGCAAAAGATGCAA+AGG + chr2_3:15812193-15812212 Msa0280800:CDS 40.0%
CAGAAAGTCTGCTTGAAAAC+AGG + chr2_3:15812222-15812241 Msa0280800:CDS 40.0%
AGTAAGTATAGTGGCAGCAT+GGG - chr2_3:15812262-15812281 None:intergenic 40.0%
GGCATAAGGAGTAAGTATAG+TGG - chr2_3:15812271-15812290 None:intergenic 40.0%
ACCTCAATATGCATCCTTTC+TGG + chr2_3:15812323-15812342 Msa0280800:CDS 40.0%
ACCAGAAAGGATGCATATTG+AGG - chr2_3:15812327-15812346 None:intergenic 40.0%
ACAACCTTCATCAACCAGAA+AGG - chr2_3:15812340-15812359 None:intergenic 40.0%
!!! GGTTGATGAAGGTTGTTTTC+AGG + chr2_3:15812344-15812363 Msa0280800:CDS 40.0%
AAACACTTTGCAACCTCCAT+CGG - chr2_3:15812388-15812407 None:intergenic 40.0%
!! ATGGAGGTTGCAAAGTGTTT+TGG + chr2_3:15812388-15812407 Msa0280800:CDS 40.0%
!! TGCCGTCTATTTGAGTTTTC+AGG + chr2_3:15812441-15812460 Msa0280800:CDS 40.0%
GGATCGGTAAATATTGATCC+GGG - chr2_3:15812521-15812540 None:intergenic 40.0%
CGGATCGGTAAATATTGATC+CGG - chr2_3:15812522-15812541 None:intergenic 40.0%
TGCTTGTGACCAAGTTTCAA+TGG + chr2_3:15812683-15812702 Msa0280800:CDS 40.0%
GTGATAGCACCATTGAAACT+TGG - chr2_3:15812695-15812714 None:intergenic 40.0%
TCATCAGTATCTTCTACCTC+TGG - chr2_3:15812795-15812814 None:intergenic 40.0%
TGCAAATCCTCATGATTCCA+TGG + chr2_3:15812836-15812855 Msa0280800:CDS 40.0%
TGTGCACAATATGGACATGA+TGG + chr2_3:15812939-15812958 Msa0280800:CDS 40.0%
TAAGTTGTCTACCACTCTTG+TGG + chr2_3:15813125-15813144 Msa0280800:three_prime_UTR 40.0%
AACGATTCCGACGCGATTTA+CGG + chr2_3:15807725-15807744 Msa0280800:five_prime_UTR 45.0%
!! TTTTGAAGAGGTGGCTATGG+CGG - chr2_3:15807751-15807770 None:intergenic 45.0%
TTAAACTGGGACGAAACTGC+GGG + chr2_3:15808233-15808252 Msa0280800:intron 45.0%
!! TAGTAGATAGTGCCGGTTCA+TGG + chr2_3:15808278-15808297 Msa0280800:intron 45.0%
ACTGGTTGAACCATCTGGTT+CGG + chr2_3:15808305-15808324 Msa0280800:intron 45.0%
GAGCTAAGTAAAGTTGGCCA+AGG + chr2_3:15808361-15808380 Msa0280800:intron 45.0%
TGAAAGACGGGCAATGAGAA+AGG - chr2_3:15808776-15808795 None:intergenic 45.0%
TTTCTCATTGCCCGTCTTTC+AGG + chr2_3:15808775-15808794 Msa0280800:intron 45.0%
ACTGACAGCAGAATGTCAGA+AGG + chr2_3:15808831-15808850 Msa0280800:exon 45.0%
!! TATTTTGGGGAAATCCTCCG+CGG - chr2_3:15809130-15809149 None:intergenic 45.0%
AACCGTAAATCATCTCGCTG+TGG + chr2_3:15809188-15809207 Msa0280800:CDS 45.0%
AACCAGTAACACGCCATTCA+GGG - chr2_3:15809259-15809278 None:intergenic 45.0%
AAACCAGTAACACGCCATTC+AGG - chr2_3:15809260-15809279 None:intergenic 45.0%
CTAAAGCTGGAATGTCGGTA+AGG + chr2_3:15809384-15809403 Msa0280800:CDS 45.0%
GAGTACATTGCATGGTCCTA+CGG + chr2_3:15809614-15809633 Msa0280800:CDS 45.0%
!! TGAGGTATTTGGTGATGCTG+TGG + chr2_3:15809655-15809674 Msa0280800:CDS 45.0%
TGATACAACCTACCGAGTAG+AGG + chr2_3:15809682-15809701 Msa0280800:CDS 45.0%
ATGCTGTTGGGAATTTGGCT+TGG + chr2_3:15809713-15809732 Msa0280800:CDS 45.0%
!! GTTGGGAATTTGGCTTGGAT+TGG + chr2_3:15809718-15809737 Msa0280800:CDS 45.0%
CATACTTTCATCCCGCAGAA+GGG - chr2_3:15809777-15809796 None:intergenic 45.0%
TGGCTGTTACGTGTCTGATA+TGG + chr2_3:15810069-15810088 Msa0280800:intron 45.0%
TCTTCCTCTACCACCACATT+AGG + chr2_3:15810173-15810192 Msa0280800:intron 45.0%
CAGTAGCATGCAATCAACCA+TGG + chr2_3:15810223-15810242 Msa0280800:intron 45.0%
CGAAGGAGAAGAACTCTTTG+GGG - chr2_3:15810251-15810270 None:intergenic 45.0%
GCGAAGGAGAAGAACTCTTT+GGG - chr2_3:15810252-15810271 None:intergenic 45.0%
CAAAGAGTTCTTCTCCTTCG+CGG + chr2_3:15810251-15810270 Msa0280800:intron 45.0%
! TTAGTGAGGGTGTGAGTGAA+GGG - chr2_3:15810323-15810342 None:intergenic 45.0%
! TTTAGTGAGGGTGTGAGTGA+AGG - chr2_3:15810324-15810343 None:intergenic 45.0%
GTACCCAACTTCAAACCCAA+AGG + chr2_3:15810456-15810475 Msa0280800:intron 45.0%
! TATGATGGCTTGTGGTTGCT+AGG + chr2_3:15810733-15810752 Msa0280800:intron 45.0%
! TGATGTGGACTAAACCGTGT+CGG - chr2_3:15810871-15810890 None:intergenic 45.0%
TGGCTGTTACAGATCTGATG+TGG - chr2_3:15810886-15810905 None:intergenic 45.0%
GAATCTAGTAGGCATTCCCT+AGG + chr2_3:15811424-15811443 Msa0280800:intron 45.0%
GCTTTCTTGGGCTTCATGAA+AGG + chr2_3:15811606-15811625 Msa0280800:CDS 45.0%
CTTGGGCTTCATGAAAGGAA+AGG + chr2_3:15811611-15811630 Msa0280800:CDS 45.0%
AGTGGAAAGCTGAGTTCCAT+CGG + chr2_3:15811784-15811803 Msa0280800:CDS 45.0%
!! GTTCCATCGGCTCTACAATT+TGG + chr2_3:15811797-15811816 Msa0280800:CDS 45.0%
TGAAGAAAGCTGGAGGCAAA+TGG + chr2_3:15811836-15811855 Msa0280800:CDS 45.0%
TCTGGGCTTTACCATTCTTG+AGG + chr2_3:15811919-15811938 Msa0280800:CDS 45.0%
ATTGTGCACTCAAGAACCGT+TGG - chr2_3:15812004-15812023 None:intergenic 45.0%
GAGTAAGTATAGTGGCAGCA+TGG - chr2_3:15812263-15812282 None:intergenic 45.0%
! TGGAGTTTGCTCAAGGCATA+AGG - chr2_3:15812285-15812304 None:intergenic 45.0%
TTATGCCTTGAGCAAACTCC+AGG + chr2_3:15812284-15812303 Msa0280800:CDS 45.0%
!! GCATCCTTTCTGGTTGATGA+AGG + chr2_3:15812333-15812352 Msa0280800:CDS 45.0%
TGCTAGTTGCGCCATGAAAA+TGG - chr2_3:15812575-15812594 None:intergenic 45.0%
! ATTTTCATGGCGCAACTAGC+AGG + chr2_3:15812574-15812593 Msa0280800:CDS 45.0%
! TTTTCATGGCGCAACTAGCA+GGG + chr2_3:15812575-15812594 Msa0280800:CDS 45.0%
CTTGGTCACAAGCAACATCA+AGG - chr2_3:15812677-15812696 None:intergenic 45.0%
CACGTGTTAAAACTCTTCCC+AGG + chr2_3:15812712-15812731 Msa0280800:CDS 45.0%
TTTACGCCATGTGATGACCT+GGG - chr2_3:15812732-15812751 None:intergenic 45.0%
ATTTACGCCATGTGATGACC+TGG - chr2_3:15812733-15812752 None:intergenic 45.0%
CCTAAAGCCATGGAATCATG+AGG - chr2_3:15812846-15812865 None:intergenic 45.0%
CCTCATGATTCCATGGCTTT+AGG + chr2_3:15812843-15812862 Msa0280800:CDS 45.0%
!! CTTTAGCTTGCCTAAAGCCA+TGG - chr2_3:15812856-15812875 None:intergenic 45.0%
!! CATGGCTTTAGGCAAGCTAA+AGG + chr2_3:15812854-15812873 Msa0280800:CDS 45.0%
TAGGCAAGCTAAAGGAGAGA+AGG + chr2_3:15812862-15812881 Msa0280800:CDS 45.0%
AGGCAAGCTAAAGGAGAGAA+GGG + chr2_3:15812863-15812882 Msa0280800:CDS 45.0%
ACTGAGCATCATCGTCAAGC+TGG + chr2_3:15807673-15807692 Msa0280800:five_prime_UTR 50.0%
! ATCGCGTCGGAATCGTTTTC+CGG - chr2_3:15807722-15807741 None:intergenic 50.0%
!!! CGGTTTTGAAGAGGTGGCTA+TGG - chr2_3:15807754-15807773 None:intergenic 50.0%
!! GTGCCGGTTCATGGTTTAAC+TGG + chr2_3:15808287-15808306 Msa0280800:intron 50.0%
TCTTGGTATGGAGTTTGGCC+AGG + chr2_3:15808339-15808358 Msa0280800:intron 50.0%
GGCCAGGAGCTAAGTAAAGT+TGG + chr2_3:15808355-15808374 Msa0280800:intron 50.0%
GGCCAACTTTACTTAGCTCC+TGG - chr2_3:15808360-15808379 None:intergenic 50.0%
GAGAACCCGAGTTCGAATCT+TGG - chr2_3:15808397-15808416 None:intergenic 50.0%
AATCCCTCCTCGTTACTCCT+CGG - chr2_3:15809097-15809116 None:intergenic 50.0%
! AGGGATTTTACTTGCCACCG+CGG + chr2_3:15809110-15809129 Msa0280800:CDS 50.0%
! AAACCTTCTGAAGATGGGGG+AGG + chr2_3:15809149-15809168 Msa0280800:CDS 50.0%
ACAGGCTCGAGTACATTGCA+TGG + chr2_3:15809606-15809625 Msa0280800:CDS 50.0%
GCATGTCATAGGCCTCTACT+CGG - chr2_3:15809697-15809716 None:intergenic 50.0%
AGAGGCCTATGACATGCTGT+TGG + chr2_3:15809700-15809719 Msa0280800:CDS 50.0%
GAGGCCTATGACATGCTGTT+GGG + chr2_3:15809701-15809720 Msa0280800:CDS 50.0%
GCATACTTTCATCCCGCAGA+AGG - chr2_3:15809778-15809797 None:intergenic 50.0%
AGATGAAGGGCCTAATGTGG+TGG - chr2_3:15810186-15810205 None:intergenic 50.0%
! AAGAACTCTTTGGGGAGCCA+TGG - chr2_3:15810243-15810262 None:intergenic 50.0%
CGCGAAGGAGAAGAACTCTT+TGG - chr2_3:15810253-15810272 None:intergenic 50.0%
CTTGTGGTTGCTAGGAGGAA+TGG + chr2_3:15810741-15810760 Msa0280800:intron 50.0%
! GGAATGGTGCCGGATTTCAA+AGG + chr2_3:15810757-15810776 Msa0280800:intron 50.0%
TTGGGTCGCAATACGATGAG+TGG + chr2_3:15811766-15811785 Msa0280800:CDS 50.0%
AGAAAGCTGGAGGCAAATGG+TGG + chr2_3:15811839-15811858 Msa0280800:CDS 50.0%
! TCTTTTGCTTTGCTCCGGCT+CGG - chr2_3:15812188-15812207 None:intergenic 50.0%
GTGGCAGCATGGGATTCTAT+AGG - chr2_3:15812252-15812271 None:intergenic 50.0%
! CTCTTCCTGGAGTTTGCTCA+AGG - chr2_3:15812292-15812311 None:intergenic 50.0%
AGACACCATTCTCAGACCGA+TGG + chr2_3:15812369-15812388 Msa0280800:CDS 50.0%
AACCTCCATCGGTCTGAGAA+TGG - chr2_3:15812377-15812396 None:intergenic 50.0%
CAGCTGATGTGCTCTTGACA+AGG - chr2_3:15812417-15812436 None:intergenic 50.0%
ACAGACCAATGCTTCGCCAT+CGG - chr2_3:15812542-15812561 None:intergenic 50.0%
ACTCTTCCCAGGTCATCACA+TGG + chr2_3:15812723-15812742 Msa0280800:CDS 50.0%
GGATTCATTGATCCTGCCAG+AGG + chr2_3:15812776-15812795 Msa0280800:CDS 50.0%
CAGTATCTTCTACCTCTGGC+AGG - chr2_3:15812791-15812810 None:intergenic 50.0%
AAGGAGAGAAGGGCAAGAGA+TGG + chr2_3:15812873-15812892 Msa0280800:CDS 50.0%
ACACGCAGCAGTGAACTTCC+CGG + chr2_3:15807700-15807719 Msa0280800:five_prime_UTR 55.0%
! TCGCGTCGGAATCGTTTTCC+GGG - chr2_3:15807721-15807740 None:intergenic 55.0%
GGATGACATTGGCACTGTCG+AGG + chr2_3:15808902-15808921 Msa0280800:CDS 55.0%
! GATTTTACTTGCCACCGCGG+AGG + chr2_3:15809113-15809132 Msa0280800:CDS 55.0%
GTCCCTGAATGGCGTGTTAC+TGG + chr2_3:15809254-15809273 Msa0280800:CDS 55.0%
GTCATAGGCCTCTACTCGGT+AGG - chr2_3:15809693-15809712 None:intergenic 55.0%
GCTTTAGTTGCGCCCTTCTG+CGG + chr2_3:15809762-15809781 Msa0280800:CDS 55.0%
CTTTAGTTGCGCCCTTCTGC+GGG + chr2_3:15809763-15809782 Msa0280800:CDS 55.0%
AGGGCCTAATGTGGTGGTAG+AGG - chr2_3:15810180-15810199 None:intergenic 55.0%
TCTCCTTCGCGGTGACAACA+TGG + chr2_3:15810262-15810281 Msa0280800:intron 55.0%
CTTCCATGTTGTCACCGCGA+AGG - chr2_3:15810268-15810287 None:intergenic 55.0%
CTTCGCGGTGACAACATGGA+AGG + chr2_3:15810266-15810285 Msa0280800:intron 55.0%
! AGGGTGTGAGTGAAGGGTGT+TGG - chr2_3:15810317-15810336 None:intergenic 55.0%
! GATGGCTTGTGGTTGCTAGG+AGG + chr2_3:15810736-15810755 Msa0280800:intron 55.0%
GTTGCTAGGAGGAATGGTGC+CGG + chr2_3:15810747-15810766 Msa0280800:intron 55.0%
GTGGAAAGGACCCGAGTCAT+CGG + chr2_3:15811282-15811301 Msa0280800:intron 55.0%
TGGAAAGGACCCGAGTCATC+GGG + chr2_3:15811283-15811302 Msa0280800:intron 55.0%
! GGACTCGGTCTGACATGTAC+TGG - chr2_3:15811967-15811986 None:intergenic 55.0%
! GTGCTGCAACTAGCTCTTCC+TGG - chr2_3:15812305-15812324 None:intergenic 55.0%
CACCATTCTCAGACCGATGG+AGG + chr2_3:15812372-15812391 Msa0280800:CDS 55.0%
CCAATGCTTCGCCATCGGAT+CGG - chr2_3:15812537-15812556 None:intergenic 55.0%
CTAGCAGGGATCAGCCTGAA+AGG + chr2_3:15812589-15812608 Msa0280800:CDS 55.0%
ATGGCGGCCGTAAATCGCGT+CGG - chr2_3:15807735-15807754 None:intergenic 60.0%
ATTAGACGACACCGCACCCG+AGG + chr2_3:15809056-15809075 Msa0280800:CDS 60.0%
TTAGACGACACCGCACCCGA+GGG + chr2_3:15809057-15809076 Msa0280800:CDS 60.0%
ACCGCACCCGAGGGAAAGAT+GGG + chr2_3:15809066-15809085 Msa0280800:CDS 60.0%
ACCCGAGGGAAAGATGGGGT+TGG + chr2_3:15809071-15809090 Msa0280800:CDS 60.0%
GCCAACCCCATCTTTCCCTC+GGG - chr2_3:15809075-15809094 None:intergenic 60.0%
GGCCAACCCCATCTTTCCCT+CGG - chr2_3:15809076-15809095 None:intergenic 60.0%
TTGGCCGAGGAGTAACGAGG+AGG + chr2_3:15809090-15809109 Msa0280800:CDS 60.0%
TGGCCGAGGAGTAACGAGGA+GGG + chr2_3:15809091-15809110 Msa0280800:CDS 60.0%
TTTGGGGAAATCCTCCGCGG+TGG - chr2_3:15809127-15809146 None:intergenic 60.0%
CCTCCTCCCCCATCTTCAGA+AGG - chr2_3:15809155-15809174 None:intergenic 60.0%
! CCTTCTGAAGATGGGGGAGG+AGG + chr2_3:15809152-15809171 Msa0280800:CDS 60.0%
! GGGGAGGAGGAAAAGCGCAA+AGG + chr2_3:15809165-15809184 Msa0280800:CDS 60.0%
! TGGACTAAACCGTGTCGGCG+TGG - chr2_3:15810866-15810885 None:intergenic 60.0%
GGAAAGGACCCGAGTCATCG+GGG + chr2_3:15811284-15811303 Msa0280800:intron 60.0%
ACCACATGCCCCGATGACTC+GGG - chr2_3:15811295-15811314 None:intergenic 60.0%
GACCACATGCCCCGATGACT+CGG - chr2_3:15811296-15811315 None:intergenic 60.0%
CCGATCCGATGGCGAAGCAT+TGG + chr2_3:15812534-15812553 Msa0280800:CDS 60.0%
CACCGCACCCGAGGGAAAGA+TGG + chr2_3:15809065-15809084 Msa0280800:CDS 65.0%
CCCCATCTTTCCCTCGGGTG+CGG - chr2_3:15809070-15809089 None:intergenic 65.0%
CCGCACCCGAGGGAAAGATG+GGG + chr2_3:15809067-15809086 Msa0280800:CDS 65.0%
!! GGGAAAGATGGGGTTGGCCG+AGG + chr2_3:15809077-15809096 Msa0280800:CDS 65.0%
!! GGGTTGGCCGAGGAGTAACG+AGG + chr2_3:15809087-15809106 Msa0280800:CDS 65.0%
ATGGGGAAGCCACGCCGACA+CGG + chr2_3:15810854-15810873 Msa0280800:intron 65.0%
ACCCGAGTCATCGGGGCATG+TGG + chr2_3:15811291-15811310 Msa0280800:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 15807668 15813208 15807668 ID=Msa0280800;Name=Msa0280800
chr2_3 mRNA 15807668 15813208 15807668 ID=Msa0280800-mRNA-1;Parent=Msa0280800;Name=Msa0280800-mRNA-1;_AED=0.00;_eAED=0.00;_QI=218|1|1|1|0.66|0.5|4|186|761
chr2_3 exon 15807668 15807839 15807668 ID=Msa0280800-mRNA-1:exon:6570;Parent=Msa0280800-mRNA-1
chr2_3 exon 15808797 15809820 15808797 ID=Msa0280800-mRNA-1:exon:6571;Parent=Msa0280800-mRNA-1
chr2_3 exon 15811606 15812049 15811606 ID=Msa0280800-mRNA-1:exon:6572;Parent=Msa0280800-mRNA-1
chr2_3 exon 15812159 15813208 15812159 ID=Msa0280800-mRNA-1:exon:6573;Parent=Msa0280800-mRNA-1
chr2_3 five_prime_UTR 15807668 15807839 15807668 ID=Msa0280800-mRNA-1:five_prime_utr;Parent=Msa0280800-mRNA-1
chr2_3 five_prime_UTR 15808797 15808842 15808797 ID=Msa0280800-mRNA-1:five_prime_utr;Parent=Msa0280800-mRNA-1
chr2_3 CDS 15808843 15809820 15808843 ID=Msa0280800-mRNA-1:cds;Parent=Msa0280800-mRNA-1
chr2_3 CDS 15811606 15812049 15811606 ID=Msa0280800-mRNA-1:cds;Parent=Msa0280800-mRNA-1
chr2_3 CDS 15812159 15813022 15812159 ID=Msa0280800-mRNA-1:cds;Parent=Msa0280800-mRNA-1
chr2_3 three_prime_UTR 15813023 15813208 15813023 ID=Msa0280800-mRNA-1:three_prime_utr;Parent=Msa0280800-mRNA-1
Gene Sequence

>Msa0280800

ATGTCAGAAGGAGCCAGTTTTGTGTTAGAATCATCCGAAAATGGCACAGATTTGTCTCAGGATGACATTGGCACTGTCGAGGAAACACCAGAAGAAACAATTCTGTCAAGACAAACTTCTGTTAACCTTGTTCCTTTTATTGGTCAAAGATTTGTCTCTCAAGAAGCTGCTTATGAATTTTATTGCAGTTTTGCTAAACAATTTGGCTTTTCAATTAGACGACACCGCACCCGAGGGAAAGATGGGGTTGGCCGAGGAGTAACGAGGAGGGATTTTACTTGCCACCGCGGAGGATTTCCCCAAAATAAACCTTCTGAAGATGGGGGAGGAGGAAAAGCGCAAAGGAACCGTAAATCATCTCGCTGTGGTTGTCAAGCGTACATGCGTATTGTGAAAAAGGCAGATTTTGATGTCCCTGAATGGCGTGTTACTGGTTTTAGAAACATCCACAATCATGAGTTGTTAAAATCCAATGAGGTGCGTCTTATTCAATCACACTGTCCGATATCTCCTGATGATAAGAGCCGTATATGCATGTTTGCTAAAGCTGGAATGTCGGTAAGGCAAATGTTAAGATTAATGGAGCTAGAAAAAGGCATCAAACTTGGTTGTCTTCCTTTTACAGAGATAGATGTGAGAAACTTGTTGCAGTCTTTTAGAAACGTGGATAAAGATAATGATGCTATTGATCTGATTGCAATGTGTAAGAGATTAAAAGATGAAAATCACAACTTCAAGTATGAATTCAAGATAGATAATAATAACAGGCTCGAGTACATTGCATGGTCCTACGGCTCATCAATTCAATCATATGAGGTATTTGGTGATGCTGTGGTTTTTGATACAACCTACCGAGTAGAGGCCTATGACATGCTGTTGGGAATTTGGCTTGGATTGGACAATAATGGAGTGATATGTTGCTTTAGTTGCGCCCTTCTGCGGGATGAAAGTATGCCGTCTTTTTCATGGGCTTTAAAGGCTTTCTTGGGCTTCATGAAAGGAAAGGCTCCACAAACAATACTGACTGATCATAACACATGGCTGAAAGAAGCTATTGCTGTTGAAATGCCCGAAAGTAAACATGCCTTTTGTATATGGCATATTCTCTCCAAGTTCTCTGATTGGTTTTATTTACTTCTTGGGTCGCAATACGATGAGTGGAAAGCTGAGTTCCATCGGCTCTACAATTTGGAAATGGTGGAAGATTTTGAAGAAAGCTGGAGGCAAATGGTGGATAAATATGGACTTCATGCAAATAAACATATTATTAGCCTATACTCATTAAGGACATTCTGGGCTTTACCATTCTTGAGGCGATATTTCTTTGCAGGATTAACCAGTACATGTCAGACCGAGTCCATTAACGTTTTCATCCAACGGTTCTTGAGTGCACAATCTCAACCAGAACGTTTTTTAGAGCAAGTGGCTGATATTGTTGATTTTAATGACCGAGCCGGAGCAAAGCAAAAGATGCAAAGGAAAATGCAGAAAGTCTGCTTGAAAACAGGTTCACCTATAGAATCCCATGCTGCCACTATACTTACTCCTTATGCCTTGAGCAAACTCCAGGAAGAGCTAGTTGCAGCACCTCAATATGCATCCTTTCTGGTTGATGAAGGTTGTTTTCAGGTTAGACACCATTCTCAGACCGATGGAGGTTGCAAAGTGTTTTGGCTTCCTTGTCAAGAGCACATCAGCTGCAGCTGCCGTCTATTTGAGTTTTCAGGCATCTTATGTAAACATGTGCTACGCGTCATGTCAACTAATAACTGTTTTCACATCCCGGATCAATATTTACCGATCCGATGGCGAAGCATTGGTCTGTCTTCTTTTAACCATTTTCATGGCGCAACTAGCAGGGATCAGCCTGAAAGGATACAATATTTGGAATCTTTGGTTTCAACACTTCTAATGGAATCCGTTGAAACCGAGGAACGCCTTGATGTTGCTTGTGACCAAGTTTCAATGGTGCTATCACGTGTTAAAACTCTTCCCAGGTCATCACATGGCGTAAATGATCTTGCATTTAGTTATGCATCGGATTCATTGATCCTGCCAGAGGTAGAAGATACTGATGAAATGATTCATGGTTTTACAATTGCAAATCCTCATGATTCCATGGCTTTAGGCAAGCTAAAGGAGAGAAGGGCAAGAGATGGAGTTGATATTAGTAGAAAACGTAGGCAGTTCTCATCACCATTATGTGCACAATATGGACATGATGGATCTGATTGCTCAATAATGGCTGATGATAATATGAGTGAAGATGCATTAGGGTATATGTAG
Protein sequence

>Msa0280800

MSEGASFVLESSENGTDLSQDDIGTVEETPEETILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQFGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGFPQNKPSEDGGGGKAQRNRKSSRCGCQAYMRIVKKADFDVPEWRVTGFRNIHNHELLKSNEVRLIQSHCPISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEIDVRNLLQSFRNVDKDNDAIDLIAMCKRLKDENHNFKYEFKIDNNNRLEYIAWSYGSSIQSYEVFGDAVVFDTTYRVEAYDMLLGIWLGLDNNGVICCFSCALLRDESMPSFSWALKAFLGFMKGKAPQTILTDHNTWLKEAIAVEMPESKHAFCIWHILSKFSDWFYLLLGSQYDEWKAEFHRLYNLEMVEDFEESWRQMVDKYGLHANKHIISLYSLRTFWALPFLRRYFFAGLTSTCQTESINVFIQRFLSAQSQPERFLEQVADIVDFNDRAGAKQKMQRKMQKVCLKTGSPIESHAATILTPYALSKLQEELVAAPQYASFLVDEGCFQVRHHSQTDGGCKVFWLPCQEHISCSCRLFEFSGILCKHVLRVMSTNNCFHIPDQYLPIRWRSIGLSSFNHFHGATSRDQPERIQYLESLVSTLLMESVETEERLDVACDQVSMVLSRVKTLPRSSHGVNDLAFSYASDSLILPEVEDTDEMIHGFTIANPHDSMALGKLKERRARDGVDISRKRRQFSSPLCAQYGHDGSDCSIMADDNMSEDALGYM*