AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0281990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0281990 MtrunA17_Chr2g0296641 97.471 514 13 0 1 514 1 514 0.0 1038
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0281990 AT5G17370.1 46.019 515 243 15 6 511 23 511 6.69e-133 395
Msa0281990 AT5G17370.2 44.177 541 247 16 6 511 23 543 4.28e-128 384

Find 170 sgRNAs with CRISPR-Local

Find 509 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTGAATGGCAGCATAAA+TGG 0.226371 2_3:+17612400 Msa0281990:CDS
ACATACATGCACACAATAAA+AGG 0.250475 2_3:+17617710 Msa0281990:three_prime_UTR
ATTTGATGATCAGTACTTCT+TGG 0.260374 2_3:+17616219 Msa0281990:CDS
CACCGAGCTGTATTTGAGTA+TGG 0.279417 2_3:-17617038 None:intergenic
CCTATCAAAGGTCCCATTCC+TGG 0.279793 2_3:+17610770 Msa0281990:CDS
AACAGACATCGGGCTATAAT+TGG 0.293999 2_3:+17614446 Msa0281990:CDS
CAGAATATCTTGTATAAGAT+TGG 0.297140 2_3:+17613954 Msa0281990:CDS
CTCCATGTGTTCAATATTCC+TGG 0.306596 2_3:-17614365 None:intergenic
CAAGTCTGGTGAATTGCTTT+TGG 0.312894 2_3:+17617197 Msa0281990:CDS
TTTAGTTACAGGAGAAGAAT+AGG 0.313421 2_3:+17612043 Msa0281990:intron
TACAATATATTTCCAACAAT+TGG 0.314673 2_3:-17614012 None:intergenic
CAATCTTATACAAGATATTC+TGG 0.316404 2_3:-17613953 None:intergenic
AGGCTTTGGAGTAATGGTTT+TGG 0.318482 2_3:-17610810 None:intergenic
CTTGTTGATCCTATAGATCT+TGG 0.319419 2_3:+17614341 Msa0281990:CDS
CGTCCAAGCTGCTTCAGATT+AGG 0.324732 2_3:+17612094 Msa0281990:CDS
ATGTTTGTTGCAGAGCTTCC+AGG 0.328468 2_3:+17610713 Msa0281990:intron
AACTTGTAGATATGCTGATT+TGG 0.330995 2_3:+17617577 Msa0281990:three_prime_UTR
GGGAAATATCTGTTCTTCTC+TGG 0.339737 2_3:-17610749 None:intergenic
CCTCTCACTTTGCAGCTTCA+AGG 0.341502 2_3:+17616019 Msa0281990:intron
TTTGCAGGTATGGAAGTATC+AGG 0.341931 2_3:+17612294 Msa0281990:intron
ATCTTTCTCAGGTACTAATC+AGG 0.343100 2_3:+17615186 Msa0281990:intron
GAAGAAGGTTGGGAAGGCTT+TGG 0.353945 2_3:-17610824 None:intergenic
TACACACATGACTCTTCTTT+AGG 0.357061 2_3:+17617425 Msa0281990:CDS
GACATAACATATCTCTCATA+TGG 0.360364 2_3:-17617066 None:intergenic
AGGATTGCAAGCTACGGATA+TGG 0.368902 2_3:+17617169 Msa0281990:CDS
GTAACTTCACTGAGGAATTC+CGG 0.372959 2_3:+17612160 Msa0281990:CDS
ATATGACTCTTCACACAATC+TGG 0.380808 2_3:-17613853 None:intergenic
CCAGGAATGGGACCTTTGAT+AGG 0.382366 2_3:-17610770 None:intergenic
TAGGATAGGTATTAGTGCTT+TGG 0.386261 2_3:+17612324 Msa0281990:CDS
GTCCAAGCTGCTTCAGATTA+GGG 0.392192 2_3:+17612095 Msa0281990:CDS
ATTCCTGGTCCAAGATCTAT+AGG 0.402696 2_3:-17614350 None:intergenic
CGTCTTTCAATAGTACCCTT+TGG 0.408833 2_3:+17614405 Msa0281990:CDS
CGCATAACCACAAACCTCTT+AGG 0.411181 2_3:+17610537 Msa0281990:five_prime_UTR
TTCCCAACCTTCTTCCTCTC+AGG 0.412434 2_3:+17610832 Msa0281990:CDS
TTGGGAAGGCTTTGGAGTAA+TGG 0.412836 2_3:-17610816 None:intergenic
TGTGTGAAGAGTCATATTAA+AGG 0.421492 2_3:+17613859 Msa0281990:CDS
AATGCCGGGGATTGAACGTT+TGG 0.426757 2_3:+17617955 Msa0281990:three_prime_UTR
ATAATCAGTGTAGCTCCATT+AGG 0.433622 2_3:-17613925 None:intergenic
GCAGCAGGAGGGGATACGTT+TGG 0.440364 2_3:-17613979 None:intergenic
TAAATATCACTACTTCTAGA+AGG 0.441475 2_3:-17617675 None:intergenic
AGAATATCTTGTATAAGATT+GGG 0.442302 2_3:+17613955 Msa0281990:CDS
AAGAAGAGTCATGTGTGTAT+TGG 0.449571 2_3:-17617421 None:intergenic
AACAAGACTGATGGTATAAA+CGG 0.456407 2_3:-17614324 None:intergenic
ATTGGGCAAAATTTCGATGA+TGG 0.457114 2_3:+17613817 Msa0281990:CDS
CGGCTGACCGTGTGAATGCC+GGG 0.457839 2_3:+17617941 Msa0281990:three_prime_UTR
TCTTCTTTAGGTGCATGGCT+TGG 0.457974 2_3:+17617437 Msa0281990:CDS
GTGTGAAGAGTCATATTAAA+GGG 0.462496 2_3:+17613860 Msa0281990:CDS
GGAAGTATCAGGGAACTAAT+AGG 0.463165 2_3:+17612305 Msa0281990:CDS
GCGAATGACAATCCAATTGT+TGG 0.465510 2_3:+17614000 Msa0281990:CDS
TAGCTCCTGTAGGTCTATCC+TGG 0.465572 2_3:+17617532 Msa0281990:three_prime_UTR
TACCTGAGAGGAAGAAGGTT+GGG 0.466648 2_3:-17610834 None:intergenic
GAAGAAGAAGAGCCAGGAAT+GGG 0.466901 2_3:-17610782 None:intergenic
AAGATTGAACCGCACCCCTC+TGG 0.472547 2_3:-17616996 None:intergenic
TATAGATGAAGGCATCTTGA+TGG 0.480924 2_3:-17616062 None:intergenic
CTCCCTAATCTGAAGCAGCT+TGG 0.481635 2_3:-17612097 None:intergenic
TTTCTGAAGTTGGAAGGATT+GGG 0.482085 2_3:+17613800 Msa0281990:CDS
CGGATATGGAGTATCAAGTC+TGG 0.485089 2_3:+17617183 Msa0281990:CDS
GTATCTTCAGATAAGAAAGT+TGG 0.487088 2_3:+17615638 Msa0281990:CDS
GGAAATATCTGTTCTTCTCT+GGG 0.494012 2_3:-17610748 None:intergenic
TGTTTGTTGCAGAGCTTCCA+GGG 0.495725 2_3:+17610714 Msa0281990:intron
ATTGGATTGTCATTCGCAGC+AGG 0.495815 2_3:-17613994 None:intergenic
TTGGGCAAAATTTCGATGAT+GGG 0.496841 2_3:+17613818 Msa0281990:CDS
CGAACGACCTAAGAGGTTTG+TGG 0.497472 2_3:-17610544 None:intergenic
TATGAGAGATATGTTATGTC+AGG 0.497524 2_3:+17617069 Msa0281990:CDS
CAAAATAGATTTACTACGCT+GGG 0.498719 2_3:+17614281 Msa0281990:intron
TTAGGTCTGAAAAGCGGCCC+TGG 0.503201 2_3:-17613907 None:intergenic
TGGGGCCAACCATGGTTCAA+TGG 0.503896 2_3:+17617831 Msa0281990:three_prime_UTR
CATATTAAAGGGAAAACAGA+TGG 0.507771 2_3:+17613871 Msa0281990:CDS
CTTCAGATTAGGGAGTTAGA+TGG 0.511387 2_3:+17612105 Msa0281990:CDS
GTCAGCCGTTCATTAAAGAT+AGG 0.512482 2_3:-17617926 None:intergenic
GATGGGCATAACGAAGTGCC+AGG 0.519800 2_3:+17613889 Msa0281990:CDS
CAACCGTGAGATTGACTCAT+GGG 0.521496 2_3:+17617812 Msa0281990:three_prime_UTR
ATTTCGATGATGGGGTAAAG+TGG 0.521687 2_3:+17613827 Msa0281990:CDS
CCATGGTTCAATGGTTGTAG+TGG 0.524340 2_3:+17617840 Msa0281990:three_prime_UTR
ATGACTCTTCTTTAGGTGCA+TGG 0.524798 2_3:+17617432 Msa0281990:CDS
GTACTTCTTGGCAAGCTCCA+TGG 0.525715 2_3:+17616231 Msa0281990:CDS
AGATGCCTTCATCTATATCC+AGG 0.526185 2_3:+17616068 Msa0281990:CDS
ACATAACATATCTCTCATAT+GGG 0.526630 2_3:-17617065 None:intergenic
AAAACCAAACGTTCAATCCC+CGG 0.532839 2_3:-17617959 None:intergenic
CAGAAATGGGGCAGTTGTCT+CGG 0.533756 2_3:+17615556 Msa0281990:CDS
AACAGATATTTCCCTATCAA+AGG 0.535588 2_3:+17610758 Msa0281990:CDS
ATCGTATTCAGCTGTCCAAA+GGG 0.535812 2_3:-17614420 None:intergenic
TTCAAAGTGGGACAAGGTCA+TGG 0.536156 2_3:+17615227 Msa0281990:CDS
CTGTAGGCTGTAGCTCCTGT+AGG 0.538578 2_3:+17617522 Msa0281990:three_prime_UTR
GCAAAATAGATTTACTACGC+TGG 0.538663 2_3:+17614280 Msa0281990:intron
GGTGCGGTTCAATCTTATGA+AGG 0.540556 2_3:+17617003 Msa0281990:CDS
ACGGCTGACCGTGTGAATGC+CGG 0.540919 2_3:+17617940 Msa0281990:three_prime_UTR
AAGGTCTATTCTATATGCAC+TGG 0.545031 2_3:+17617468 Msa0281990:CDS
TACAACCATTGAACCATGGT+TGG 0.546553 2_3:-17617836 None:intergenic
TCTTTCTCAGGTACTAATCA+GGG 0.549036 2_3:+17615187 Msa0281990:intron
TGAAGAAGAAGAGCCAGGAA+TGG 0.550380 2_3:-17610783 None:intergenic
ATTGTCCTATCTTTAATGAA+CGG 0.552499 2_3:+17617921 Msa0281990:three_prime_UTR
ACCAACCTGGATATAGATGA+AGG 0.554851 2_3:-17616073 None:intergenic
CTACAGGAGCTACAGCCTAC+AGG 0.557455 2_3:-17617521 None:intergenic
GGATTGTCATTCGCAGCAGG+AGG 0.558967 2_3:-17613991 None:intergenic
GGCAAGCTCCATGGATGGAT+CGG 0.562424 2_3:+17616240 Msa0281990:CDS
AGAAGAATAGGAGTTCTTGT+AGG 0.564178 2_3:+17612055 Msa0281990:CDS
TTCTTGGCAAGCTCCATGGA+TGG 0.567228 2_3:+17616235 Msa0281990:CDS
GTGCCCAGAATTTCAAGCAA+AGG 0.568857 2_3:+17617391 Msa0281990:intron
ACCGAGCTGTATTTGAGTAT+GGG 0.569912 2_3:-17617037 None:intergenic
TACTAATCAGGGAGGTGCGT+CGG 0.575778 2_3:+17615198 Msa0281990:CDS
AATCGTATTCAGCTGTCCAA+AGG 0.578631 2_3:-17614421 None:intergenic
TATCAGGGAACTAATAGGAT+AGG 0.578771 2_3:+17612310 Msa0281990:CDS
TAAGACCAGGATAGACCTAC+AGG 0.579342 2_3:-17617537 None:intergenic
AATACGATTATAACAGACAT+CGG 0.583167 2_3:+17614435 Msa0281990:CDS
CAGGAATGGGACCTTTGATA+GGG 0.583299 2_3:-17610769 None:intergenic
TAAACTAACCGATCCATCCA+TGG 0.584820 2_3:-17616248 None:intergenic
ATACGATTATAACAGACATC+GGG 0.585857 2_3:+17614436 Msa0281990:CDS
TGCACTGGTTATGAGTGTAA+AGG 0.586056 2_3:+17617483 Msa0281990:exon
TAATCAGGGAGGTGCGTCGG+TGG 0.587027 2_3:+17615201 Msa0281990:CDS
CTAGTAGACTTACTGAGCAT+AGG 0.587248 2_3:+17615606 Msa0281990:CDS
TCGCATGGTCCAGAGGGGTG+CGG 0.588186 2_3:+17616987 Msa0281990:CDS
TTGACTCATGGGGCCAACCA+TGG 0.593000 2_3:+17617823 Msa0281990:three_prime_UTR
GATCCTATAGATCTTGGACC+AGG 0.593540 2_3:+17614347 Msa0281990:CDS
AAGGCTATACGACCGTCGCA+TGG 0.595513 2_3:+17616972 Msa0281990:CDS
ATACCTGAGAGGAAGAAGGT+TGG 0.596249 2_3:-17610835 None:intergenic
GCATGGCTTGGATCACATGA+AGG 0.596303 2_3:+17617449 Msa0281990:CDS
CGACCGTCGCATGGTCCAGA+GGG 0.596343 2_3:+17616981 Msa0281990:CDS
TTAACATACAGCAGGTTGAG+AGG 0.597554 2_3:-17612193 None:intergenic
GAGCTACAGCCTACAGGCCA+TGG 0.599765 2_3:-17617515 None:intergenic
GATTGTCATTCGCAGCAGGA+GGG 0.601292 2_3:-17613990 None:intergenic
TAATATACCTGAGAGGAAGA+AGG 0.602342 2_3:-17610839 None:intergenic
CTAAGAGGTTTGTGGTTATG+CGG 0.602955 2_3:-17610536 None:intergenic
TTCAATCCCCGGCATTCACA+CGG 0.603680 2_3:-17617948 None:intergenic
CCACTACAACCATTGAACCA+TGG 0.605806 2_3:-17617840 None:intergenic
ATTGGTTCACCTCGTGCTGG+TGG 0.606026 2_3:-17610599 None:intergenic
AAAATTGGTTCACCTCGTGC+TGG 0.606468 2_3:-17610602 None:intergenic
GTGCGGTTCAATCTTATGAA+GGG 0.606644 2_3:+17617004 Msa0281990:CDS
TGGATCTTCAAAGTGGGACA+AGG 0.607375 2_3:+17615221 Msa0281990:CDS
TATAGGATCAACAAGACTGA+TGG 0.609256 2_3:-17614333 None:intergenic
CTCACGGTTGATGAACAAGA+TGG 0.610776 2_3:-17617799 None:intergenic
CTTAGTCATCTCAGGTGGAG+AGG 0.610805 2_3:+17617149 Msa0281990:intron
CGTCGGTGGATCTTCAAAGT+GGG 0.612256 2_3:+17615215 Msa0281990:CDS
GACCAGGAATATTGAACACA+TGG 0.613967 2_3:+17614363 Msa0281990:CDS
ACGACCGTCGCATGGTCCAG+AGG 0.614914 2_3:+17616980 Msa0281990:CDS
GTTGATGTGCAGACAGCAGA+GGG 0.617118 2_3:+17612358 Msa0281990:CDS
TCCCATACTCAAATACAGCT+CGG 0.619703 2_3:+17617036 Msa0281990:CDS
TCTGGGTCAAAGTAGAACCC+TGG 0.620805 2_3:-17610731 None:intergenic
ATTGTCATTCGCAGCAGGAG+GGG 0.621401 2_3:-17613989 None:intergenic
GTGGAGAGGATTGCAAGCTA+CGG 0.621530 2_3:+17617163 Msa0281990:CDS
TGAGAGGAAGAAGGTTGGGA+AGG 0.622156 2_3:-17610830 None:intergenic
TGTAAAGGATCTTGATACCA+TGG 0.622170 2_3:+17617498 Msa0281990:three_prime_UTR
TGGGCAAAATTTCGATGATG+GGG 0.622565 2_3:+17613819 Msa0281990:CDS
CACCCCTCTGGACCATGCGA+CGG 0.628411 2_3:-17616984 None:intergenic
TCAACCGTGAGATTGACTCA+TGG 0.630192 2_3:+17617811 Msa0281990:three_prime_UTR
ATATTAAAGGGAAAACAGAT+GGG 0.630283 2_3:+17613872 Msa0281990:CDS
GGCCCCATGAGTCAATCTCA+CGG 0.631238 2_3:-17617815 None:intergenic
AATCTCATCATGCTAAGACC+AGG 0.633162 2_3:-17617550 None:intergenic
AGAGGTTTGTGGTTATGCGG+CGG 0.634122 2_3:-17610533 None:intergenic
ATCTTGATACCATGGCCTGT+AGG 0.637805 2_3:+17617506 Msa0281990:three_prime_UTR
ACGCTGGGATCAGAAACAGC+TGG 0.640481 2_3:+17614296 Msa0281990:CDS
GCGTCGGTGGATCTTCAAAG+TGG 0.643269 2_3:+17615214 Msa0281990:CDS
TTGCAGGTATGGAAGTATCA+GGG 0.646599 2_3:+17612295 Msa0281990:intron
GGCTGACCGTGTGAATGCCG+GGG 0.648235 2_3:+17617942 Msa0281990:three_prime_UTR
TGTTGATGTGCAGACAGCAG+AGG 0.649292 2_3:+17612357 Msa0281990:CDS
ATGGGCATAACGAAGTGCCA+GGG 0.649366 2_3:+17613890 Msa0281990:CDS
GAACACATGGAGCAGACTAG+AGG 0.656571 2_3:+17614376 Msa0281990:CDS
CTGGGATCAGAAACAGCTGG+TGG 0.660024 2_3:+17614299 Msa0281990:CDS
AACCGTGAGATTGACTCATG+GGG 0.676480 2_3:+17617813 Msa0281990:three_prime_UTR
GTTACACTTGCAATAGTGTG+AGG 0.676923 2_3:-17612142 None:intergenic
TTTATGTGGACTCAGAAATG+GGG 0.684458 2_3:+17615544 Msa0281990:CDS
GGCATCTTGATGGTATGTGA+AGG 0.697520 2_3:-17616052 None:intergenic
GCAGCATAAATGGCTCGCTG+AGG 0.699205 2_3:+17612410 Msa0281990:CDS
ATAATGATAATATACCTGAG+AGG 0.715301 2_3:-17610846 None:intergenic
GACCGTCGCATGGTCCAGAG+GGG 0.718666 2_3:+17616982 Msa0281990:CDS
GCTCCATTAGGTCTGAAAAG+CGG 0.719096 2_3:-17613913 None:intergenic
AAGAACATGCCACCAGCACG+AGG 0.722812 2_3:+17610590 Msa0281990:exon
TTCTCAGGTACTAATCAGGG+AGG 0.740969 2_3:+17615190 Msa0281990:intron
TTGCAAGTGTAACTTCACTG+AGG 0.773591 2_3:+17612152 Msa0281990:CDS
AAATGTTTGATAGCACACAG+TGG 0.780801 2_3:-17617247 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTTAATTAAACATTATT+AGG - chr2_3:17610671-17610690 None:intergenic 10.0%
!!! ATTTTTTCTTAATTTCTTAT+TGG - chr2_3:17611027-17611046 None:intergenic 10.0%
!! AATAAGAAATTAAGAAAAAA+TGG + chr2_3:17611026-17611045 Msa0281990:intron 10.0%
!! ATAAGAAATTAAGAAAAAAT+GGG + chr2_3:17611027-17611046 Msa0281990:intron 10.0%
!!! AAATTTTTTGAATAAAGATA+AGG - chr2_3:17611647-17611666 None:intergenic 10.0%
!! AATCAAATTATCAAAATAAA+TGG - chr2_3:17612239-17612258 None:intergenic 10.0%
!! AAAATAAAAAATGTATATTG+GGG - chr2_3:17615888-17615907 None:intergenic 10.0%
!! CAAAATAAAAAATGTATATT+GGG - chr2_3:17615889-17615908 None:intergenic 10.0%
!! ACTTAATATATAATAAACAG+AGG + chr2_3:17612994-17613013 Msa0281990:intron 15.0%
!! TTGTTATCAAAAAAAAGTTT+AGG - chr2_3:17613150-17613169 None:intergenic 15.0%
!! ATGAATGACAAATTAATTAA+AGG - chr2_3:17614039-17614058 None:intergenic 15.0%
!! AATTTGTCATTCATTTATTT+AGG + chr2_3:17614045-17614064 Msa0281990:intron 15.0%
!! ATTTGTCATTCATTTATTTA+GGG + chr2_3:17614046-17614065 Msa0281990:intron 15.0%
!! TCTCTGAATTAAATATAATT+TGG - chr2_3:17614560-17614579 None:intergenic 15.0%
!!! GATTAAGAAATATTCATTTT+AGG + chr2_3:17614720-17614739 Msa0281990:intron 15.0%
!! GTTATTAAATCAAATTCTAA+CGG - chr2_3:17615050-17615069 None:intergenic 15.0%
!! ATTAGATATAAAATTAACAG+GGG - chr2_3:17615134-17615153 None:intergenic 15.0%
!! GATTAGATATAAAATTAACA+GGG - chr2_3:17615135-17615154 None:intergenic 15.0%
!! AGATTAGATATAAAATTAAC+AGG - chr2_3:17615136-17615155 None:intergenic 15.0%
!! GTACATTTAATAACAATAAT+AGG - chr2_3:17615346-17615365 None:intergenic 15.0%
!! AATTTACCATAATAGAATAT+TGG + chr2_3:17615756-17615775 Msa0281990:intron 15.0%
!! ATTTACCATAATAGAATATT+GGG + chr2_3:17615757-17615776 Msa0281990:intron 15.0%
!! AAATAAAAAATGTATATTGG+GGG - chr2_3:17615887-17615906 None:intergenic 15.0%
!! CCAAAATAAAAAATGTATAT+TGG - chr2_3:17615890-17615909 None:intergenic 15.0%
!!! CCAATATACATTTTTTATTT+TGG + chr2_3:17615887-17615906 Msa0281990:intron 15.0%
!!! ATATACATTTTTTATTTTGG+TGG + chr2_3:17615890-17615909 Msa0281990:intron 15.0%
!! ACAAAATAAAAAACAGAAAT+TGG - chr2_3:17616170-17616189 None:intergenic 15.0%
!!! AATTTCTGTTTTTTATTTTG+TGG + chr2_3:17616169-17616188 Msa0281990:intron 15.0%
!!! ATTTCTGTTTTTTATTTTGT+GGG + chr2_3:17616170-17616189 Msa0281990:intron 15.0%
!! TTCATTTCAATGTAAATATA+AGG - chr2_3:17616391-17616410 None:intergenic 15.0%
!! TCAAATAAAAATCTTTAACA+AGG - chr2_3:17617610-17617629 None:intergenic 15.0%
!!! AAAAAAAACATAATTTTGCT+TGG + chr2_3:17617744-17617763 Msa0281990:three_prime_UTR 15.0%
!! AAAATTTAATAGGCATACAA+TGG + chr2_3:17610897-17610916 Msa0281990:intron 20.0%
!!! TTAAATTTTTGTTGCAAAAG+TGG + chr2_3:17611115-17611134 Msa0281990:intron 20.0%
!!! TAAATTTTTGTTGCAAAAGT+GGG + chr2_3:17611116-17611135 Msa0281990:intron 20.0%
!! ACTATGAATTTCTAATTTGA+CGG - chr2_3:17611298-17611317 None:intergenic 20.0%
!! TATAAAATCGTATAACTGTT+CGG + chr2_3:17611502-17611521 Msa0281990:intron 20.0%
!! ATGATATGCCATAAATTATA+AGG - chr2_3:17611600-17611619 None:intergenic 20.0%
!!! TTTTTGAATAAAGATAAGGA+GGG - chr2_3:17611643-17611662 None:intergenic 20.0%
!!! TTTTTTGAATAAAGATAAGG+AGG - chr2_3:17611644-17611663 None:intergenic 20.0%
!! CAGATTAAATTTGAATTGTT+CGG - chr2_3:17611727-17611746 None:intergenic 20.0%
!!! AACTTTAGAATTCAATTCAA+CGG - chr2_3:17612015-17612034 None:intergenic 20.0%
!!! TTAGTAATGCTATAAGTTTT+TGG + chr2_3:17612849-17612868 Msa0281990:intron 20.0%
!!! GACAAGTATATATTTAACTT+GGG - chr2_3:17613338-17613357 None:intergenic 20.0%
!! AGACAAGTATATATTTAACT+TGG - chr2_3:17613339-17613358 None:intergenic 20.0%
!! ATATTCTTTATGCAATGAAA+GGG - chr2_3:17613441-17613460 None:intergenic 20.0%
!! TACTAACTGAATGATTAATA+CGG - chr2_3:17613535-17613554 None:intergenic 20.0%
!!! TTATACTTTTTGATTGATTC+TGG + chr2_3:17613709-17613728 Msa0281990:intron 20.0%
!! AGAATATCTTGTATAAGATT+GGG + chr2_3:17613955-17613974 Msa0281990:CDS 20.0%
!! TACAATATATTTCCAACAAT+TGG - chr2_3:17614015-17614034 None:intergenic 20.0%
!! TTATATTTAAGTAGTGCTTA+CGG - chr2_3:17614091-17614110 None:intergenic 20.0%
!! ATTATGAACAAAATGACATT+TGG - chr2_3:17614586-17614605 None:intergenic 20.0%
!! TTGATTTAATAACATAGACT+TGG + chr2_3:17615057-17615076 Msa0281990:intron 20.0%
!! TTAATGAATATGAAGTGAAA+CGG + chr2_3:17615406-17615425 Msa0281990:intron 20.0%
!!! AACCTGTTTTGATAAATATT+TGG + chr2_3:17615460-17615479 Msa0281990:intron 20.0%
!!! TAATTATTTATTGTTGTTGC+AGG + chr2_3:17615511-17615530 Msa0281990:intron 20.0%
!!! AATTATTTATTGTTGTTGCA+GGG + chr2_3:17615512-17615531 Msa0281990:intron 20.0%
!! AAGAATGAAAAAGATTAGAA+AGG + chr2_3:17615709-17615728 Msa0281990:intron 20.0%
!! AGAATGAAAAAGATTAGAAA+GGG + chr2_3:17615710-17615729 Msa0281990:intron 20.0%
!!! GTTCTTTTCATTTTTAGATA+AGG + chr2_3:17616953-17616972 Msa0281990:intron 20.0%
! ATAATGATAATATACCTGAG+AGG - chr2_3:17610849-17610868 None:intergenic 25.0%
! AAAACTAATTTACACTGTCA+GGG - chr2_3:17611057-17611076 None:intergenic 25.0%
! TAAAACTAATTTACACTGTC+AGG - chr2_3:17611058-17611077 None:intergenic 25.0%
!!! GACAGTGTAAATTAGTTTTA+TGG + chr2_3:17611058-17611077 Msa0281990:intron 25.0%
!! AAATTTTTGTTGCAAAAGTG+GGG + chr2_3:17611117-17611136 Msa0281990:intron 25.0%
! TGAAATTTCATGAAAACTCA+GGG - chr2_3:17611334-17611353 None:intergenic 25.0%
! TTGAAATTTCATGAAAACTC+AGG - chr2_3:17611335-17611354 None:intergenic 25.0%
!!! GTAATGTTTTTTCTGAAGTT+CGG + chr2_3:17611807-17611826 Msa0281990:intron 25.0%
!!! GTTTGTTTGATTTTAGTTAC+AGG + chr2_3:17612032-17612051 Msa0281990:intron 25.0%
!! TGCATTCATTGACAAATTTT+AGG + chr2_3:17612472-17612491 Msa0281990:intron 25.0%
!!! ATTGACAAATTTTAGGACAT+TGG + chr2_3:17612479-17612498 Msa0281990:intron 25.0%
! TGTTGTATATGAACAATTCT+TGG + chr2_3:17612531-17612550 Msa0281990:intron 25.0%
!! AATTGTGATTTTGTTAGTGA+TGG + chr2_3:17612575-17612594 Msa0281990:intron 25.0%
!!! GTCATTTTTAGATTCTGAAA+TGG + chr2_3:17612641-17612660 Msa0281990:intron 25.0%
! AAAAAAAAGTTTAGGTGAGT+TGG - chr2_3:17613142-17613161 None:intergenic 25.0%
! TAAATATAGAAACTGACACT+AGG + chr2_3:17613174-17613193 Msa0281990:intron 25.0%
!!! AGTATATATTTAACTTGGGA+GGG - chr2_3:17613334-17613353 None:intergenic 25.0%
!!! AAGTATATATTTAACTTGGG+AGG - chr2_3:17613335-17613354 None:intergenic 25.0%
! CATAGAAACTCAATACAATA+AGG + chr2_3:17613369-17613388 Msa0281990:intron 25.0%
! GATATTCTTTATGCAATGAA+AGG - chr2_3:17613442-17613461 None:intergenic 25.0%
! AATAGCATCATTATTAAGGT+AGG - chr2_3:17613497-17613516 None:intergenic 25.0%
! TGTCAATAGCATCATTATTA+AGG - chr2_3:17613501-17613520 None:intergenic 25.0%
!! TAAGAGTTCAATGATAATGT+TGG - chr2_3:17613616-17613635 None:intergenic 25.0%
! ATATTAAAGGGAAAACAGAT+GGG + chr2_3:17613872-17613891 Msa0281990:CDS 25.0%
! CAATCTTATACAAGATATTC+TGG - chr2_3:17613956-17613975 None:intergenic 25.0%
! CAGAATATCTTGTATAAGAT+TGG + chr2_3:17613954-17613973 Msa0281990:CDS 25.0%
! TATATTTAAGTAGTGCTTAC+GGG - chr2_3:17614090-17614109 None:intergenic 25.0%
! TCAACTTTATCCAAAATATG+CGG - chr2_3:17614236-17614255 None:intergenic 25.0%
! AATACGATTATAACAGACAT+CGG + chr2_3:17614435-17614454 Msa0281990:CDS 25.0%
! TGAGAAATACTATATTAGCA+TGG - chr2_3:17614637-17614656 None:intergenic 25.0%
! TTCTTAATCAAAACTCAACT+GGG - chr2_3:17614709-17614728 None:intergenic 25.0%
! TTTCTTAATCAAAACTCAAC+TGG - chr2_3:17614710-17614729 None:intergenic 25.0%
!! AATATGCATACTTTTCTGAA+TGG + chr2_3:17614747-17614766 Msa0281990:intron 25.0%
! ATTCACAACCTTATTGATAA+AGG - chr2_3:17614962-17614981 None:intergenic 25.0%
! CTCCAAATATTTATCAAAAC+AGG - chr2_3:17615465-17615484 None:intergenic 25.0%
!!! CTGTTTTGATAAATATTTGG+AGG + chr2_3:17615463-17615482 Msa0281990:intron 25.0%
!!! TTGGAAGTTCTAAAAAAGAT+TGG + chr2_3:17615657-17615676 Msa0281990:CDS 25.0%
!! TTCTAAAAAAGATTGGTTCA+AGG + chr2_3:17615664-17615683 Msa0281990:CDS 25.0%
! GAATGAAAAAGATTAGAAAG+GGG + chr2_3:17615711-17615730 Msa0281990:intron 25.0%
! AATGAAAAAGATTAGAAAGG+GGG + chr2_3:17615712-17615731 Msa0281990:intron 25.0%
!! TTATTATTTTCCGTTCTATG+CGG + chr2_3:17615916-17615935 Msa0281990:intron 25.0%
!! TTTTTAATACCACTTCTACA+TGG + chr2_3:17616299-17616318 Msa0281990:intron 25.0%
! AGGCTTGAAAATATGTTTAT+CGG - chr2_3:17616552-17616571 None:intergenic 25.0%
! AGATATAAGAAAGAGTGATT+TGG - chr2_3:17616727-17616746 None:intergenic 25.0%
! AGATATAAGAAAGAGTGATT+TGG - chr2_3:17616727-17616746 None:intergenic 25.0%
! ACATAACATATCTCTCATAT+GGG - chr2_3:17617068-17617087 None:intergenic 25.0%
! TAAATATCACTACTTCTAGA+AGG - chr2_3:17617678-17617697 None:intergenic 25.0%
! ATTGTCCTATCTTTAATGAA+CGG + chr2_3:17617921-17617940 Msa0281990:three_prime_UTR 25.0%
!!! ACGTTTGGTTTTATACATTT+TGG + chr2_3:17617970-17617989 Msa0281990:three_prime_UTR 25.0%
!! TATACATTTTGGATAACGAA+TGG + chr2_3:17617981-17618000 Msa0281990:three_prime_UTR 25.0%
AACAGATATTTCCCTATCAA+AGG + chr2_3:17610758-17610777 Msa0281990:CDS 30.0%
ACATACTCAAATAAACACAC+CGG - chr2_3:17610991-17611010 None:intergenic 30.0%
GTGTTTATTTGAGTATGTGT+TGG + chr2_3:17610993-17611012 Msa0281990:intron 30.0%
! TTAATTTCTTATTGGCCTAG+TGG - chr2_3:17611019-17611038 None:intergenic 30.0%
AGAGTTACTCATAGAGTAAA+CGG - chr2_3:17611220-17611239 None:intergenic 30.0%
TGAATTTCTAATTTGACGGT+TGG - chr2_3:17611294-17611313 None:intergenic 30.0%
GATAAGATTAGTGCTTTATC+TGG + chr2_3:17611439-17611458 Msa0281990:intron 30.0%
! ATCACCAAAAAGTAGCATTT+TGG - chr2_3:17611470-17611489 None:intergenic 30.0%
GCGTATTGTGATTTATTTAG+AGG + chr2_3:17611889-17611908 Msa0281990:intron 30.0%
ACGTATAATACACAATGAGT+GGG - chr2_3:17611954-17611973 None:intergenic 30.0%
GGCTTATGTAAAAATCGAAA+AGG - chr2_3:17611994-17612013 None:intergenic 30.0%
TTTAGTTACAGGAGAAGAAT+AGG + chr2_3:17612043-17612062 Msa0281990:intron 30.0%
! GTTAATTTCTTCGACGATTT+TGG + chr2_3:17612211-17612230 Msa0281990:intron 30.0%
!! CGAACTGATGTTTTATTGAA+TGG + chr2_3:17612388-17612407 Msa0281990:CDS 30.0%
TTATTGAATGGCAGCATAAA+TGG + chr2_3:17612400-17612419 Msa0281990:CDS 30.0%
TATTATGACCATCTTAGAAC+CGG + chr2_3:17612617-17612636 Msa0281990:intron 30.0%
TCAGAATCTAAAAATGACAC+CGG - chr2_3:17612639-17612658 None:intergenic 30.0%
!! ACAAAAAAAGTAAAGCGTTG+AGG - chr2_3:17612706-17612725 None:intergenic 30.0%
AGTATTTCTTCAACACAAGA+TGG - chr2_3:17612882-17612901 None:intergenic 30.0%
!! TGCATAAAATTAGCCTTGTA+TGG + chr2_3:17612912-17612931 Msa0281990:intron 30.0%
AATAAGGAATACACGAACTT+CGG + chr2_3:17613385-17613404 Msa0281990:intron 30.0%
GCATAAAGAATATCAAGAGA+TGG + chr2_3:17613448-17613467 Msa0281990:intron 30.0%
! TGATCTAATTGGAGGTATAT+TGG - chr2_3:17613653-17613672 None:intergenic 30.0%
TGTGTGAAGAGTCATATTAA+AGG + chr2_3:17613859-17613878 Msa0281990:CDS 30.0%
GTGTGAAGAGTCATATTAAA+GGG + chr2_3:17613860-17613879 Msa0281990:CDS 30.0%
CATATTAAAGGGAAAACAGA+TGG + chr2_3:17613871-17613890 Msa0281990:CDS 30.0%
ATATTTAAGTAGTGCTTACG+GGG - chr2_3:17614089-17614108 None:intergenic 30.0%
TTGTATAATCCTCTCTACTA+TGG + chr2_3:17614192-17614211 Msa0281990:intron 30.0%
CAAAATAGATTTACTACGCT+GGG + chr2_3:17614281-17614300 Msa0281990:intron 30.0%
AACAAGACTGATGGTATAAA+CGG - chr2_3:17614327-17614346 None:intergenic 30.0%
ATACGATTATAACAGACATC+GGG + chr2_3:17614436-17614455 Msa0281990:CDS 30.0%
GTGTATGTAAATGAGAGATA+GGG - chr2_3:17614512-17614531 None:intergenic 30.0%
TGTGTATGTAAATGAGAGAT+AGG - chr2_3:17614513-17614532 None:intergenic 30.0%
! CATTTTTCACCTTATTCATC+TGG + chr2_3:17614850-17614869 Msa0281990:intron 30.0%
! CAGTATTTTCCAGATGAATA+AGG - chr2_3:17614862-17614881 None:intergenic 30.0%
CCAACCATTAAATCTCTTTA+CGG + chr2_3:17614892-17614911 Msa0281990:intron 30.0%
GGGAAATTTCTTAAGGAAAA+GGG - chr2_3:17615114-17615133 None:intergenic 30.0%
TTAACAGGGGAAATTTCTTA+AGG - chr2_3:17615121-17615140 None:intergenic 30.0%
TGTTTCTCTATATCTTTCTC+AGG + chr2_3:17615175-17615194 Msa0281990:intron 30.0%
!! ACCAGGCAATATTTTTACTA+GGG - chr2_3:17615310-17615329 None:intergenic 30.0%
!! TACCAGGCAATATTTTTACT+AGG - chr2_3:17615311-17615330 None:intergenic 30.0%
! ATTTTATGTGGACTCAGAAA+TGG + chr2_3:17615542-17615561 Msa0281990:CDS 30.0%
! TTTTATGTGGACTCAGAAAT+GGG + chr2_3:17615543-17615562 Msa0281990:CDS 30.0%
GTATCTTCAGATAAGAAAGT+TGG + chr2_3:17615638-17615657 Msa0281990:CDS 30.0%
CTCTTCCCAATATTCTATTA+TGG - chr2_3:17615765-17615784 None:intergenic 30.0%
!! CAGAAGTAAAAAGGTACTTA+AGG - chr2_3:17615841-17615860 None:intergenic 30.0%
CACAAAATGCAGAAGTAAAA+AGG - chr2_3:17615850-17615869 None:intergenic 30.0%
GTATATTGGGGGTTTAAATT+TGG - chr2_3:17615876-17615895 None:intergenic 30.0%
! TATTATTTTCCGTTCTATGC+GGG + chr2_3:17615917-17615936 Msa0281990:intron 30.0%
!! TTGTGGGTTTTATACTAGTT+TGG + chr2_3:17616186-17616205 Msa0281990:intron 30.0%
! ATTTGATGATCAGTACTTCT+TGG + chr2_3:17616219-17616238 Msa0281990:CDS 30.0%
!! GATCGGTTAGTTTATTCTTT+GGG + chr2_3:17616257-17616276 Msa0281990:intron 30.0%
!!! GGATCTTAGAATTTTGGTTT+CGG + chr2_3:17616479-17616498 Msa0281990:intron 30.0%
!!! GATCTTAGAATTTTGGTTTC+GGG + chr2_3:17616480-17616499 Msa0281990:intron 30.0%
CTTGAAAATATGTTTATCGG+TGG - chr2_3:17616549-17616568 None:intergenic 30.0%
! TAACATCATTTTGTCAGTTC+AGG - chr2_3:17616863-17616882 None:intergenic 30.0%
GACATAACATATCTCTCATA+TGG - chr2_3:17617069-17617088 None:intergenic 30.0%
TATGAGAGATATGTTATGTC+AGG + chr2_3:17617069-17617088 Msa0281990:CDS 30.0%
!!! TACGTTAGACTGTGTTATTT+TGG + chr2_3:17617369-17617388 Msa0281990:intron 30.0%
! AACTTGTAGATATGCTGATT+TGG + chr2_3:17617577-17617596 Msa0281990:three_prime_UTR 30.0%
ACATACATGCACACAATAAA+AGG + chr2_3:17617710-17617729 Msa0281990:three_prime_UTR 30.0%
!! CATAATTTTGCTTGGCTTTT+TGG + chr2_3:17617752-17617771 Msa0281990:three_prime_UTR 30.0%
!! AGTTTTGTAGATGTGTGTCT+GGG - chr2_3:17610628-17610647 None:intergenic 35.0%
!! AAGTTTTGTAGATGTGTGTC+TGG - chr2_3:17610629-17610648 None:intergenic 35.0%
GGAAATATCTGTTCTTCTCT+GGG - chr2_3:17610751-17610770 None:intergenic 35.0%
TAATATACCTGAGAGGAAGA+AGG - chr2_3:17610842-17610861 None:intergenic 35.0%
GTTGTTACAACGTGATGATT+TGG + chr2_3:17610925-17610944 Msa0281990:intron 35.0%
CATACTCAAATAAACACACC+GGG - chr2_3:17610990-17611009 None:intergenic 35.0%
! GAATAATGACGAGTTTTCGT+TGG + chr2_3:17611148-17611167 Msa0281990:intron 35.0%
!!! AAGGCCAAAATGCTACTTTT+TGG + chr2_3:17611463-17611482 Msa0281990:intron 35.0%
!! TAGTTGATGCTACTTTAAGC+AGG + chr2_3:17611568-17611587 Msa0281990:intron 35.0%
!! AGTTGATGCTACTTTAAGCA+GGG + chr2_3:17611569-17611588 Msa0281990:intron 35.0%
GGGCTTGACCTTATAATTTA+TGG + chr2_3:17611589-17611608 Msa0281990:intron 35.0%
!! TAGCTCTTTTTGGCAAACAA+TGG - chr2_3:17611783-17611802 None:intergenic 35.0%
!!! CATTACAGTCTAGCTCTTTT+TGG - chr2_3:17611793-17611812 None:intergenic 35.0%
!! CTTACTCTAGGAGTAACTTT+TGG - chr2_3:17611925-17611944 None:intergenic 35.0%
CGTATAATACACAATGAGTG+GGG - chr2_3:17611953-17611972 None:intergenic 35.0%
CACGTATAATACACAATGAG+TGG - chr2_3:17611955-17611974 None:intergenic 35.0%
AGAAGAATAGGAGTTCTTGT+AGG + chr2_3:17612055-17612074 Msa0281990:CDS 35.0%
! GTTGAGAGGTTTGTATTTTC+CGG - chr2_3:17612182-17612201 None:intergenic 35.0%
CGAAGAAATTAACATACAGC+AGG - chr2_3:17612204-17612223 None:intergenic 35.0%
AGTTGCGTCTAATGTAAGAT+TGG + chr2_3:17612270-17612289 Msa0281990:intron 35.0%
GTTGCGTCTAATGTAAGATT+GGG + chr2_3:17612271-17612290 Msa0281990:intron 35.0%
TAATGTAAGATTGGGTTTGC+AGG + chr2_3:17612279-17612298 Msa0281990:intron 35.0%
TATCAGGGAACTAATAGGAT+AGG + chr2_3:17612310-17612329 Msa0281990:CDS 35.0%
TAGGATAGGTATTAGTGCTT+TGG + chr2_3:17612324-17612343 Msa0281990:CDS 35.0%
TATTGTGTTCTGTAGAGCTT+CGG + chr2_3:17612664-17612683 Msa0281990:intron 35.0%
ATTCACAGTTTAACATGGCA+GGG - chr2_3:17612731-17612750 None:intergenic 35.0%
! AGCTGATTCACAGTTTAACA+TGG - chr2_3:17612736-17612755 None:intergenic 35.0%
!! TCTTGAAAGAAGACTAGCTT+TGG + chr2_3:17612779-17612798 Msa0281990:intron 35.0%
GCATTACTAACTTCTTATGC+TGG - chr2_3:17612839-17612858 None:intergenic 35.0%
AGTAGAAGCTAATCCATACA+AGG - chr2_3:17612928-17612947 None:intergenic 35.0%
TGACACTAGGAGATAAACTT+AGG + chr2_3:17613187-17613206 Msa0281990:intron 35.0%
ATCTAATTCCTCTTTCCCTA+GGG - chr2_3:17613417-17613436 None:intergenic 35.0%
TATCTAATTCCTCTTTCCCT+AGG - chr2_3:17613418-17613437 None:intergenic 35.0%
TACCTCCAATTAGATCACAT+TGG + chr2_3:17613656-17613675 Msa0281990:intron 35.0%
AACCAATGTGATCTAATTGG+AGG - chr2_3:17613661-17613680 None:intergenic 35.0%
TCCAATTAGATCACATTGGT+TGG + chr2_3:17613660-17613679 Msa0281990:intron 35.0%
TCCAACCAATGTGATCTAAT+TGG - chr2_3:17613664-17613683 None:intergenic 35.0%
TAGTTGTTCCTTGTGAAGTT+TGG + chr2_3:17613766-17613785 Msa0281990:intron 35.0%
!!! ACACACAGTTTTTCTGAAGT+TGG + chr2_3:17613790-17613809 Msa0281990:intron 35.0%
!!! ACAGTTTTTCTGAAGTTGGA+AGG + chr2_3:17613794-17613813 Msa0281990:intron 35.0%
!!! TTTTCTGAAGTTGGAAGGAT+TGG + chr2_3:17613799-17613818 Msa0281990:CDS 35.0%
!! TTTCTGAAGTTGGAAGGATT+GGG + chr2_3:17613800-17613819 Msa0281990:CDS 35.0%
ATTGGGCAAAATTTCGATGA+TGG + chr2_3:17613817-17613836 Msa0281990:CDS 35.0%
TTGGGCAAAATTTCGATGAT+GGG + chr2_3:17613818-17613837 Msa0281990:CDS 35.0%
ATATGACTCTTCACACAATC+TGG - chr2_3:17613856-17613875 None:intergenic 35.0%
ATAATCAGTGTAGCTCCATT+AGG - chr2_3:17613928-17613947 None:intergenic 35.0%
ATCCTCTCTACTATGGATAT+TGG + chr2_3:17614199-17614218 Msa0281990:intron 35.0%
TCCTCTCTACTATGGATATT+GGG + chr2_3:17614200-17614219 Msa0281990:intron 35.0%
! ACATGCAATTCCGCATATTT+TGG + chr2_3:17614223-17614242 Msa0281990:intron 35.0%
GCAAAATAGATTTACTACGC+TGG + chr2_3:17614280-17614299 Msa0281990:intron 35.0%
TATAGGATCAACAAGACTGA+TGG - chr2_3:17614336-17614355 None:intergenic 35.0%
CTTGTTGATCCTATAGATCT+TGG + chr2_3:17614341-17614360 Msa0281990:CDS 35.0%
AAATGAGAGATAGGGAAAGA+GGG - chr2_3:17614504-17614523 None:intergenic 35.0%
TAAATGAGAGATAGGGAAAG+AGG - chr2_3:17614505-17614524 None:intergenic 35.0%
! GGAAATTTGGAACCTATACA+GGG - chr2_3:17614684-17614703 None:intergenic 35.0%
! TGGAAATTTGGAACCTATAC+AGG - chr2_3:17614685-17614704 None:intergenic 35.0%
TAATCAAAACTCAACTGGGT+TGG - chr2_3:17614705-17614724 None:intergenic 35.0%
AGATTTAATGGTTGGAGAAC+TGG - chr2_3:17614887-17614906 None:intergenic 35.0%
CCGTAAAGAGATTTAATGGT+TGG - chr2_3:17614895-17614914 None:intergenic 35.0%
TCAGCCGTAAAGAGATTTAA+TGG - chr2_3:17614899-17614918 None:intergenic 35.0%
AAGTTCTACATAGAGTGATC+TGG + chr2_3:17614933-17614952 Msa0281990:intron 35.0%
TCTGGTAGCCTTTATCAATA+AGG + chr2_3:17614951-17614970 Msa0281990:intron 35.0%
ATATCGCAGTTGTCATCTTT+AGG - chr2_3:17615088-17615107 None:intergenic 35.0%
GGGGAAATTTCTTAAGGAAA+AGG - chr2_3:17615115-17615134 None:intergenic 35.0%
ATCTTTCTCAGGTACTAATC+AGG + chr2_3:17615186-17615205 Msa0281990:intron 35.0%
TCTTTCTCAGGTACTAATCA+GGG + chr2_3:17615187-17615206 Msa0281990:intron 35.0%
!! CCAGGCAATATTTTTACTAG+GGG - chr2_3:17615309-17615328 None:intergenic 35.0%
TAGGTTAATGAAGATGTACC+AGG - chr2_3:17615327-17615346 None:intergenic 35.0%
!! ACATTTTGATCGTGTCTTCA+TGG + chr2_3:17615364-17615383 Msa0281990:intron 35.0%
TGAATATGAAGTGAAACGGA+TGG + chr2_3:17615410-17615429 Msa0281990:intron 35.0%
TTTATGTGGACTCAGAAATG+GGG + chr2_3:17615544-17615563 Msa0281990:CDS 35.0%
ACTTTCACAAAGTGAAGCAT+CGG - chr2_3:17615960-17615979 None:intergenic 35.0%
!! TATAGATGAAGGCATCTTGA+TGG - chr2_3:17616065-17616084 None:intergenic 35.0%
!! GGATCGGTTAGTTTATTCTT+TGG + chr2_3:17616256-17616275 Msa0281990:intron 35.0%
AATTTGATGCCATGTAGAAG+TGG - chr2_3:17616311-17616330 None:intergenic 35.0%
TACATGGGATCTATTAGACT+TGG - chr2_3:17616439-17616458 None:intergenic 35.0%
TCTAATAGATCCCATGTAGT+TGG + chr2_3:17616441-17616460 Msa0281990:intron 35.0%
CTAATAGATCCCATGTAGTT+GGG + chr2_3:17616442-17616461 Msa0281990:intron 35.0%
TTTCGGCTTAACTCAATTAC+CGG + chr2_3:17616504-17616523 Msa0281990:intron 35.0%
TCTGATGCCATCTTAGAATT+TGG + chr2_3:17616667-17616686 Msa0281990:intron 35.0%
CTGATGCCATCTTAGAATTT+GGG + chr2_3:17616668-17616687 Msa0281990:intron 35.0%
! AGAGAACCCAAATTCTAAGA+TGG - chr2_3:17616677-17616696 None:intergenic 35.0%
! TTGGGTTCTCTTTTTGATGA+AGG + chr2_3:17616686-17616705 Msa0281990:intron 35.0%
TATCTGATCCTGTCTTAGAT+AGG + chr2_3:17616742-17616761 Msa0281990:intron 35.0%
TCTGATGCCATCTTAGAATT+TGG + chr2_3:17616667-17616686 Msa0281990:intron 35.0%
CTGATGCCATCTTAGAATTT+GGG + chr2_3:17616668-17616687 Msa0281990:intron 35.0%
CCTTCATCAAAAAGAGAGTA+AGG - chr2_3:17616798-17616817 None:intergenic 35.0%
! CCTTACTCTCTTTTTGATGA+AGG + chr2_3:17616795-17616814 Msa0281990:intron 35.0%
!!! TCGTAGAAGCTATTTTTTCG+TGG + chr2_3:17616893-17616912 Msa0281990:intron 35.0%
!!! CGTAGAAGCTATTTTTTCGT+GGG + chr2_3:17616894-17616913 Msa0281990:intron 35.0%
AGAGATATGTTATGTCAGGT+GGG + chr2_3:17617073-17617092 Msa0281990:intron 35.0%
AATTCTGACTTAGTCATCTC+AGG + chr2_3:17617141-17617160 Msa0281990:intron 35.0%
! AAATGTTTGATAGCACACAG+TGG - chr2_3:17617250-17617269 None:intergenic 35.0%
! AAAGTGCTTCTGACAACAAA+GGG - chr2_3:17617327-17617346 None:intergenic 35.0%
!! AAAAGTGCTTCTGACAACAA+AGG - chr2_3:17617328-17617347 None:intergenic 35.0%
!!! TTGTTGTCAGAAGCACTTTT+AGG + chr2_3:17617328-17617347 Msa0281990:intron 35.0%
!!! TGTTGTCAGAAGCACTTTTA+GGG + chr2_3:17617329-17617348 Msa0281990:intron 35.0%
CTTCCTTTGCTTGAAATTCT+GGG - chr2_3:17617397-17617416 None:intergenic 35.0%
TCTTCCTTTGCTTGAAATTC+TGG - chr2_3:17617398-17617417 None:intergenic 35.0%
AAGAAGAGTCATGTGTGTAT+TGG - chr2_3:17617424-17617443 None:intergenic 35.0%
TACACACATGACTCTTCTTT+AGG + chr2_3:17617425-17617444 Msa0281990:CDS 35.0%
AAGGTCTATTCTATATGCAC+TGG + chr2_3:17617468-17617487 Msa0281990:CDS 35.0%
TGTAAAGGATCTTGATACCA+TGG + chr2_3:17617498-17617517 Msa0281990:three_prime_UTR 35.0%
CTAAGAGGTTTGTGGTTATG+CGG - chr2_3:17610539-17610558 None:intergenic 40.0%
AGAAAAACGAACGACCTAAG+AGG - chr2_3:17610554-17610573 None:intergenic 40.0%
!! TTAGGTCGTTCGTTTTTCTC+TGG + chr2_3:17610555-17610574 Msa0281990:five_prime_UTR 40.0%
!! TCGTTCGTTTTTCTCTGGTT+TGG + chr2_3:17610560-17610579 Msa0281990:five_prime_UTR 40.0%
AGATGTGTGTCTGGGAAAAT+TGG - chr2_3:17610620-17610639 None:intergenic 40.0%
GGGAAATATCTGTTCTTCTC+TGG - chr2_3:17610752-17610771 None:intergenic 40.0%
!! GTTTTTGAAGAAGAAGAGCC+AGG - chr2_3:17610791-17610810 None:intergenic 40.0%
!!! AGGCTTTGGAGTAATGGTTT+TGG - chr2_3:17610813-17610832 None:intergenic 40.0%
!! AACGTGATGATTTGGTTGTG+AGG + chr2_3:17610933-17610952 Msa0281990:intron 40.0%
! GGTTGTGAGGACATTTTATG+TGG + chr2_3:17610946-17610965 Msa0281990:intron 40.0%
! GGACATTTTATGTGGAATCC+CGG + chr2_3:17610954-17610973 Msa0281990:intron 40.0%
! GACATTTTATGTGGAATCCC+GGG + chr2_3:17610955-17610974 Msa0281990:intron 40.0%
GATTAGTGCTTTATCTGGCA+AGG + chr2_3:17611444-17611463 Msa0281990:intron 40.0%
! TTTTGGCAAACAATGGAGGA+TGG - chr2_3:17611776-17611795 None:intergenic 40.0%
!! CTCTTTTTGGCAAACAATGG+AGG - chr2_3:17611780-17611799 None:intergenic 40.0%
! ATACGTGAATGTTTCTGCGT+TGG + chr2_3:17611968-17611987 Msa0281990:intron 40.0%
CTTCAGATTAGGGAGTTAGA+TGG + chr2_3:17612105-17612124 Msa0281990:CDS 40.0%
GTTACACTTGCAATAGTGTG+AGG - chr2_3:17612145-17612164 None:intergenic 40.0%
TTGCAAGTGTAACTTCACTG+AGG + chr2_3:17612152-17612171 Msa0281990:CDS 40.0%
GTAACTTCACTGAGGAATTC+CGG + chr2_3:17612160-17612179 Msa0281990:CDS 40.0%
! TTAACATACAGCAGGTTGAG+AGG - chr2_3:17612196-17612215 None:intergenic 40.0%
TAAGATTGGGTTTGCAGGTA+TGG + chr2_3:17612284-17612303 Msa0281990:intron 40.0%
!! TTTGCAGGTATGGAAGTATC+AGG + chr2_3:17612294-17612313 Msa0281990:intron 40.0%
!! TTGCAGGTATGGAAGTATCA+GGG + chr2_3:17612295-17612314 Msa0281990:intron 40.0%
!! GGAAGTATCAGGGAACTAAT+AGG + chr2_3:17612305-17612324 Msa0281990:CDS 40.0%
!! AAATGACACCGGTTCTAAGA+TGG - chr2_3:17612628-17612647 None:intergenic 40.0%
TTCACAGTTTAACATGGCAG+GGG - chr2_3:17612730-17612749 None:intergenic 40.0%
GATTCACAGTTTAACATGGC+AGG - chr2_3:17612732-17612751 None:intergenic 40.0%
AGATCAAGACGCATAAAGCA+GGG - chr2_3:17612762-17612781 None:intergenic 40.0%
AAGATCAAGACGCATAAAGC+AGG - chr2_3:17612763-17612782 None:intergenic 40.0%
! TCTAACCCTGATTAGTTCCT+GGG + chr2_3:17613114-17613133 Msa0281990:intron 40.0%
! GCACAGATGCTTTTATGCAA+TGG - chr2_3:17613291-17613310 None:intergenic 40.0%
GAACTTCGGTTATTACCCTA+GGG + chr2_3:17613399-17613418 Msa0281990:intron 40.0%
TGGGCAAAATTTCGATGATG+GGG + chr2_3:17613819-17613838 Msa0281990:CDS 40.0%
!! ATTTCGATGATGGGGTAAAG+TGG + chr2_3:17613827-17613846 Msa0281990:CDS 40.0%
GCGAATGACAATCCAATTGT+TGG + chr2_3:17614000-17614019 Msa0281990:CDS 40.0%
TCCCAATATCCATAGTAGAG+AGG - chr2_3:17614204-17614223 None:intergenic 40.0%
ATTCCTGGTCCAAGATCTAT+AGG - chr2_3:17614353-17614372 None:intergenic 40.0%
GACCAGGAATATTGAACACA+TGG + chr2_3:17614363-17614382 Msa0281990:CDS 40.0%
CTCCATGTGTTCAATATTCC+TGG - chr2_3:17614368-17614387 None:intergenic 40.0%
CGTCTTTCAATAGTACCCTT+TGG + chr2_3:17614405-17614424 Msa0281990:CDS 40.0%
ATCGTATTCAGCTGTCCAAA+GGG - chr2_3:17614423-17614442 None:intergenic 40.0%
AATCGTATTCAGCTGTCCAA+AGG - chr2_3:17614424-17614443 None:intergenic 40.0%
AACAGACATCGGGCTATAAT+TGG + chr2_3:17614446-17614465 Msa0281990:CDS 40.0%
GAAAGAGGGAAGAAAGAGAA+AGG - chr2_3:17614490-17614509 None:intergenic 40.0%
! TTTGGAACCTATACAGGGAA+GGG - chr2_3:17614679-17614698 None:intergenic 40.0%
! ATTTGGAACCTATACAGGGA+AGG - chr2_3:17614680-17614699 None:intergenic 40.0%
! ACTCAACTGGGTTGGAAATT+TGG - chr2_3:17614697-17614716 None:intergenic 40.0%
CCCCTAGTAAAAATATTGCC+TGG + chr2_3:17615306-17615325 Msa0281990:intron 40.0%
CTAGTAGACTTACTGAGCAT+AGG + chr2_3:17615606-17615625 Msa0281990:CDS 40.0%
AGATGCCTTCATCTATATCC+AGG + chr2_3:17616068-17616087 Msa0281990:CDS 40.0%
ACCAACCTGGATATAGATGA+AGG - chr2_3:17616076-17616095 None:intergenic 40.0%
AGTCAAGTAGACAACTTAGC+AGG - chr2_3:17616108-17616127 None:intergenic 40.0%
TAAACTAACCGATCCATCCA+TGG - chr2_3:17616251-17616270 None:intergenic 40.0%
TGCTGCAGAATCTCATGTTT+AGG + chr2_3:17616340-17616359 Msa0281990:intron 40.0%
GAAATCTCACCCAACTACAT+GGG - chr2_3:17616454-17616473 None:intergenic 40.0%
!!! GAATTTTGGTTTCGGGCTTT+CGG + chr2_3:17616487-17616506 Msa0281990:intron 40.0%
TGAGTAGTTCACTTACAAGC+CGG - chr2_3:17616526-17616545 None:intergenic 40.0%
! AGCCTTTTCTCATCCAATGT+CGG + chr2_3:17616567-17616586 Msa0281990:intron 40.0%
ATATGTCCAGCTCTTAGCAT+GGG - chr2_3:17616610-17616629 None:intergenic 40.0%
TATATGTCCAGCTCTTAGCA+TGG - chr2_3:17616611-17616630 None:intergenic 40.0%
ATGCTAAGAGCTGGACATAT+AGG + chr2_3:17616610-17616629 Msa0281990:intron 40.0%
TGCTAAGAGCTGGACATATA+GGG + chr2_3:17616611-17616630 Msa0281990:intron 40.0%
CAATCGATCCTGTCTTAGAT+AGG + chr2_3:17616643-17616662 Msa0281990:intron 40.0%
! CATCAGAACCTATCTAAGAC+AGG - chr2_3:17616654-17616673 None:intergenic 40.0%
! CATCAGAACCTATCTAAGAC+AGG - chr2_3:17616654-17616673 None:intergenic 40.0%
TGCCATCTTAGAATTTGGGT+TGG + chr2_3:17616672-17616691 Msa0281990:intron 40.0%
! GCCATCTTAGAATTTGGGTT+GGG + chr2_3:17616673-17616692 Msa0281990:intron 40.0%
GTGCGGTTCAATCTTATGAA+GGG + chr2_3:17617004-17617023 Msa0281990:CDS 40.0%
TCCCATACTCAAATACAGCT+CGG + chr2_3:17617036-17617055 Msa0281990:CDS 40.0%
ACCGAGCTGTATTTGAGTAT+GGG - chr2_3:17617040-17617059 None:intergenic 40.0%
GAGAGATATGTTATGTCAGG+TGG + chr2_3:17617072-17617091 Msa0281990:intron 40.0%
! CAAGTCTGGTGAATTGCTTT+TGG + chr2_3:17617197-17617216 Msa0281990:CDS 40.0%
AAGTGCTTCTGACAACAAAG+GGG - chr2_3:17617326-17617345 None:intergenic 40.0%
ATGACTCTTCTTTAGGTGCA+TGG + chr2_3:17617432-17617451 Msa0281990:CDS 40.0%
!! TGCACTGGTTATGAGTGTAA+AGG + chr2_3:17617483-17617502 Msa0281990:exon 40.0%
AATCTCATCATGCTAAGACC+AGG - chr2_3:17617553-17617572 None:intergenic 40.0%
TACAACCATTGAACCATGGT+TGG - chr2_3:17617839-17617858 None:intergenic 40.0%
GTCAGCCGTTCATTAAAGAT+AGG - chr2_3:17617929-17617948 None:intergenic 40.0%
AAAACCAAACGTTCAATCCC+CGG - chr2_3:17617962-17617981 None:intergenic 40.0%
CGCATAACCACAAACCTCTT+AGG + chr2_3:17610537-17610556 Msa0281990:five_prime_UTR 45.0%
! AAAATTGGTTCACCTCGTGC+TGG - chr2_3:17610605-17610624 None:intergenic 45.0%
! ATGTTTGTTGCAGAGCTTCC+AGG + chr2_3:17610713-17610732 Msa0281990:intron 45.0%
! TGTTTGTTGCAGAGCTTCCA+GGG + chr2_3:17610714-17610733 Msa0281990:intron 45.0%
CAGGAATGGGACCTTTGATA+GGG - chr2_3:17610772-17610791 None:intergenic 45.0%
GAAGAAGAAGAGCCAGGAAT+GGG - chr2_3:17610785-17610804 None:intergenic 45.0%
TGAAGAAGAAGAGCCAGGAA+TGG - chr2_3:17610786-17610805 None:intergenic 45.0%
!! TTGGGAAGGCTTTGGAGTAA+TGG - chr2_3:17610819-17610838 None:intergenic 45.0%
TACCTGAGAGGAAGAAGGTT+GGG - chr2_3:17610837-17610856 None:intergenic 45.0%
ATACCTGAGAGGAAGAAGGT+TGG - chr2_3:17610838-17610857 None:intergenic 45.0%
ACTCAAATAAACACACCGGG+AGG - chr2_3:17610987-17611006 None:intergenic 45.0%
! TTGAGTATGTGTTGGCCACT+AGG + chr2_3:17611001-17611020 Msa0281990:intron 45.0%
TTGCAAAAGTGGGGTGATGT+GGG + chr2_3:17611126-17611145 Msa0281990:intron 45.0%
AGTGGGGATCAACTTACTCT+AGG - chr2_3:17611937-17611956 None:intergenic 45.0%
GTCCAAGCTGCTTCAGATTA+GGG + chr2_3:17612095-17612114 Msa0281990:CDS 45.0%
GATCAAGACGCATAAAGCAG+GGG - chr2_3:17612761-17612780 None:intergenic 45.0%
TAAACAGAGGTTGACCCAGT+TGG + chr2_3:17613007-17613026 Msa0281990:intron 45.0%
GAACTAATCAGGGTTAGAGC+AGG - chr2_3:17613112-17613131 None:intergenic 45.0%
! CTCTAACCCTGATTAGTTCC+TGG + chr2_3:17613113-17613132 Msa0281990:intron 45.0%
TGGATCCCAGGAACTAATCA+GGG - chr2_3:17613122-17613141 None:intergenic 45.0%
TTGGATCCCAGGAACTAATC+AGG - chr2_3:17613123-17613142 None:intergenic 45.0%
CGAACTTCGGTTATTACCCT+AGG + chr2_3:17613398-17613417 Msa0281990:intron 45.0%
GGTTATTACCCTAGGGAAAG+AGG + chr2_3:17613406-17613425 Msa0281990:intron 45.0%
TGTGTGTGCCAAACTTCACA+AGG - chr2_3:17613777-17613796 None:intergenic 45.0%
GCTCCATTAGGTCTGAAAAG+CGG - chr2_3:17613916-17613935 None:intergenic 45.0%
ATTGGATTGTCATTCGCAGC+AGG - chr2_3:17613997-17614016 None:intergenic 45.0%
GATCCTATAGATCTTGGACC+AGG + chr2_3:17614347-17614366 Msa0281990:CDS 45.0%
ATCTCTTTACGGCTGAGCTT+CGG + chr2_3:17614903-17614922 Msa0281990:intron 45.0%
TTCTCAGGTACTAATCAGGG+AGG + chr2_3:17615190-17615209 Msa0281990:intron 45.0%
TGGATCTTCAAAGTGGGACA+AGG + chr2_3:17615221-17615240 Msa0281990:CDS 45.0%
TTCAAAGTGGGACAAGGTCA+TGG + chr2_3:17615227-17615246 Msa0281990:CDS 45.0%
GATTGCATACCCGCATAGAA+CGG - chr2_3:17615929-17615948 None:intergenic 45.0%
CTTGAAGCTGCAAAGTGAGA+GGG - chr2_3:17616021-17616040 None:intergenic 45.0%
! GGCATCTTGATGGTATGTGA+AGG - chr2_3:17616055-17616074 None:intergenic 45.0%
GCCTTCATCTATATCCAGGT+TGG + chr2_3:17616072-17616091 Msa0281990:intron 45.0%
CAGGAAAAAGCTTACCAACC+TGG - chr2_3:17616089-17616108 None:intergenic 45.0%
GGAAATCTCACCCAACTACA+TGG - chr2_3:17616455-17616474 None:intergenic 45.0%
GTAGTTGGGTGAGATTTCCA+CGG + chr2_3:17616456-17616475 Msa0281990:intron 45.0%
TAGTTGGGTGAGATTTCCAC+GGG + chr2_3:17616457-17616476 Msa0281990:intron 45.0%
!! CCAAAATTCTAAGATCCCCG+TGG - chr2_3:17616476-17616495 None:intergenic 45.0%
! CCACGGGGATCTTAGAATTT+TGG + chr2_3:17616473-17616492 Msa0281990:intron 45.0%
GTCCGACATTGGATGAGAAA+AGG - chr2_3:17616572-17616591 None:intergenic 45.0%
GAGTATCAAGAGTCCGACAT+TGG - chr2_3:17616583-17616602 None:intergenic 45.0%
TATGTCCAGCTCTTAGCATG+GGG - chr2_3:17616609-17616628 None:intergenic 45.0%
TAAGAGCTGGACATATAGGG+TGG + chr2_3:17616614-17616633 Msa0281990:intron 45.0%
AAGAGCTGGACATATAGGGT+GGG + chr2_3:17616615-17616634 Msa0281990:intron 45.0%
! GCCCAACCCAAATTCTAAGA+TGG - chr2_3:17616776-17616795 None:intergenic 45.0%
GGTGCGGTTCAATCTTATGA+AGG + chr2_3:17617003-17617022 Msa0281990:CDS 45.0%
CACCGAGCTGTATTTGAGTA+TGG - chr2_3:17617041-17617060 None:intergenic 45.0%
TCTGACTTAGTCATCTCAGG+TGG + chr2_3:17617144-17617163 Msa0281990:intron 45.0%
AGGATTGCAAGCTACGGATA+TGG + chr2_3:17617169-17617188 Msa0281990:CDS 45.0%
! CGGATATGGAGTATCAAGTC+TGG + chr2_3:17617183-17617202 Msa0281990:CDS 45.0%
!! GTCTGGTGAATTGCTTTTGG+AGG + chr2_3:17617200-17617219 Msa0281990:CDS 45.0%
!!! TGTCAGAAGCACTTTTAGGG+TGG + chr2_3:17617332-17617351 Msa0281990:intron 45.0%
!!! GTCAGAAGCACTTTTAGGGT+GGG + chr2_3:17617333-17617352 Msa0281990:intron 45.0%
GTGCCCAGAATTTCAAGCAA+AGG + chr2_3:17617391-17617410 Msa0281990:intron 45.0%
TCTTCTTTAGGTGCATGGCT+TGG + chr2_3:17617437-17617456 Msa0281990:CDS 45.0%
ATCTTGATACCATGGCCTGT+AGG + chr2_3:17617506-17617525 Msa0281990:three_prime_UTR 45.0%
TAAGACCAGGATAGACCTAC+AGG - chr2_3:17617540-17617559 None:intergenic 45.0%
!! TGCTTGGCTTTTTGGCATCA+AGG + chr2_3:17617760-17617779 Msa0281990:three_prime_UTR 45.0%
!! CTCACGGTTGATGAACAAGA+TGG - chr2_3:17617802-17617821 None:intergenic 45.0%
! TCAACCGTGAGATTGACTCA+TGG + chr2_3:17617811-17617830 Msa0281990:three_prime_UTR 45.0%
! CAACCGTGAGATTGACTCAT+GGG + chr2_3:17617812-17617831 Msa0281990:three_prime_UTR 45.0%
! AACCGTGAGATTGACTCATG+GGG + chr2_3:17617813-17617832 Msa0281990:three_prime_UTR 45.0%
CCACTACAACCATTGAACCA+TGG - chr2_3:17617843-17617862 None:intergenic 45.0%
CCATGGTTCAATGGTTGTAG+TGG + chr2_3:17617840-17617859 Msa0281990:three_prime_UTR 45.0%
!! TATTATGTATAAAATTTAAT+AGG + chr2_3:17610887-17610906 Msa0281990:intron 5.0%
CGAACGACCTAAGAGGTTTG+TGG - chr2_3:17610547-17610566 None:intergenic 50.0%
TCTGGGTCAAAGTAGAACCC+TGG - chr2_3:17610734-17610753 None:intergenic 50.0%
CCAGGAATGGGACCTTTGAT+AGG - chr2_3:17610773-17610792 None:intergenic 50.0%
CCTATCAAAGGTCCCATTCC+TGG + chr2_3:17610770-17610789 Msa0281990:CDS 50.0%
GAAGAAGGTTGGGAAGGCTT+TGG - chr2_3:17610827-17610846 None:intergenic 50.0%
TGAGAGGAAGAAGGTTGGGA+AGG - chr2_3:17610833-17610852 None:intergenic 50.0%
TTCCCAACCTTCTTCCTCTC+AGG + chr2_3:17610832-17610851 Msa0281990:CDS 50.0%
CAAATAAACACACCGGGAGG+TGG - chr2_3:17610984-17611003 None:intergenic 50.0%
GTTGCAAAAGTGGGGTGATG+TGG + chr2_3:17611125-17611144 Msa0281990:intron 50.0%
TGGCAAACAATGGAGGATGG+TGG - chr2_3:17611773-17611792 None:intergenic 50.0%
CGTCCAAGCTGCTTCAGATT+AGG + chr2_3:17612094-17612113 Msa0281990:CDS 50.0%
! CTCCCTAATCTGAAGCAGCT+TGG - chr2_3:17612100-17612119 None:intergenic 50.0%
TGTTGATGTGCAGACAGCAG+AGG + chr2_3:17612357-17612376 Msa0281990:CDS 50.0%
GTTGATGTGCAGACAGCAGA+GGG + chr2_3:17612358-17612377 Msa0281990:CDS 50.0%
GTTCTGTAGAGCTTCGGAGA+TGG + chr2_3:17612670-17612689 Msa0281990:intron 50.0%
TGACCCAGTTGGCAAGAAGT+TGG + chr2_3:17613018-17613037 Msa0281990:intron 50.0%
GAGCCAACTTCTTGCCAACT+GGG - chr2_3:17613024-17613043 None:intergenic 50.0%
TGAGCCAACTTCTTGCCAAC+TGG - chr2_3:17613025-17613044 None:intergenic 50.0%
! CAACTCCCACCACCATTTTG+AGG + chr2_3:17613066-17613085 Msa0281990:intron 50.0%
GAGGTCCTCAAAATGGTGGT+GGG - chr2_3:17613074-17613093 None:intergenic 50.0%
CAACGAGGTCCTCAAAATGG+TGG - chr2_3:17613078-17613097 None:intergenic 50.0%
! GTTTAGGTGAGTTGGATCCC+AGG - chr2_3:17613134-17613153 None:intergenic 50.0%
! ATGGGCATAACGAAGTGCCA+GGG + chr2_3:17613890-17613909 Msa0281990:CDS 50.0%
ATTGTCATTCGCAGCAGGAG+GGG - chr2_3:17613992-17614011 None:intergenic 50.0%
GATTGTCATTCGCAGCAGGA+GGG - chr2_3:17613993-17614012 None:intergenic 50.0%
GAACACATGGAGCAGACTAG+AGG + chr2_3:17614376-17614395 Msa0281990:CDS 50.0%
ACCTATACAGGGAAGGGAAG+TGG - chr2_3:17614673-17614692 None:intergenic 50.0%
! TACTAATCAGGGAGGTGCGT+CGG + chr2_3:17615198-17615217 Msa0281990:CDS 50.0%
CGTCGGTGGATCTTCAAAGT+GGG + chr2_3:17615215-17615234 Msa0281990:CDS 50.0%
CAGAAATGGGGCAGTTGTCT+CGG + chr2_3:17615556-17615575 Msa0281990:CDS 50.0%
CCTTGAAGCTGCAAAGTGAG+AGG - chr2_3:17616022-17616041 None:intergenic 50.0%
CCTCTCACTTTGCAGCTTCA+AGG + chr2_3:17616019-17616038 Msa0281990:intron 50.0%
GTACTTCTTGGCAAGCTCCA+TGG + chr2_3:17616231-17616250 Msa0281990:CDS 50.0%
TTCTTGGCAAGCTCCATGGA+TGG + chr2_3:17616235-17616254 Msa0281990:CDS 50.0%
AGTTGGGTGAGATTTCCACG+GGG + chr2_3:17616458-17616477 Msa0281990:intron 50.0%
ATGTCCAGCTCTTAGCATGG+GGG - chr2_3:17616608-17616627 None:intergenic 50.0%
CTTAGTCATCTCAGGTGGAG+AGG + chr2_3:17617149-17617168 Msa0281990:intron 50.0%
GTGGAGAGGATTGCAAGCTA+CGG + chr2_3:17617163-17617182 Msa0281990:CDS 50.0%
! GCATGGCTTGGATCACATGA+AGG + chr2_3:17617449-17617468 Msa0281990:CDS 50.0%
TAGCTCCTGTAGGTCTATCC+TGG + chr2_3:17617532-17617551 Msa0281990:three_prime_UTR 50.0%
TTCAATCCCCGGCATTCACA+CGG - chr2_3:17617951-17617970 None:intergenic 50.0%
AATGCCGGGGATTGAACGTT+TGG + chr2_3:17617955-17617974 Msa0281990:three_prime_UTR 50.0%
AAGAACATGCCACCAGCACG+AGG + chr2_3:17610590-17610609 Msa0281990:exon 55.0%
! ATTGGTTCACCTCGTGCTGG+TGG - chr2_3:17610602-17610621 None:intergenic 55.0%
GCAGCATAAATGGCTCGCTG+AGG + chr2_3:17612410-17612429 Msa0281990:CDS 55.0%
CGAGGTCCTCAAAATGGTGG+TGG - chr2_3:17613075-17613094 None:intergenic 55.0%
GCGCAACGAGGTCCTCAAAA+TGG - chr2_3:17613081-17613100 None:intergenic 55.0%
! GATGGGCATAACGAAGTGCC+AGG + chr2_3:17613889-17613908 Msa0281990:CDS 55.0%
TTAGGTCTGAAAAGCGGCCC+TGG - chr2_3:17613910-17613929 None:intergenic 55.0%
!!! GGGCCGCTTTTCAGACCTAA+TGG + chr2_3:17613910-17613929 Msa0281990:CDS 55.0%
GGATTGTCATTCGCAGCAGG+AGG - chr2_3:17613994-17614013 None:intergenic 55.0%
ACGCTGGGATCAGAAACAGC+TGG + chr2_3:17614296-17614315 Msa0281990:CDS 55.0%
CTGGGATCAGAAACAGCTGG+TGG + chr2_3:17614299-17614318 Msa0281990:CDS 55.0%
GCCACTTCCCTTCCCTGTAT+AGG + chr2_3:17614669-17614688 Msa0281990:intron 55.0%
! GCGTCGGTGGATCTTCAAAG+TGG + chr2_3:17615214-17615233 Msa0281990:CDS 55.0%
GGCAAGCTCCATGGATGGAT+CGG + chr2_3:17616240-17616259 Msa0281990:CDS 55.0%
TGTCCAGCTCTTAGCATGGG+GGG - chr2_3:17616607-17616626 None:intergenic 55.0%
AAGGCTATACGACCGTCGCA+TGG + chr2_3:17616972-17616991 Msa0281990:CDS 55.0%
AAGATTGAACCGCACCCCTC+TGG - chr2_3:17616999-17617018 None:intergenic 55.0%
CTACAGGAGCTACAGCCTAC+AGG - chr2_3:17617524-17617543 None:intergenic 55.0%
CTGTAGGCTGTAGCTCCTGT+AGG + chr2_3:17617522-17617541 Msa0281990:three_prime_UTR 55.0%
GGCCCCATGAGTCAATCTCA+CGG - chr2_3:17617818-17617837 None:intergenic 55.0%
TTGACTCATGGGGCCAACCA+TGG + chr2_3:17617823-17617842 Msa0281990:three_prime_UTR 55.0%
TGGGGCCAACCATGGTTCAA+TGG + chr2_3:17617831-17617850 Msa0281990:three_prime_UTR 55.0%
! AAGTTGGCTCATGCCCCGCA+AGG + chr2_3:17613034-17613053 Msa0281990:intron 60.0%
! AGTTGGCTCATGCCCCGCAA+GGG + chr2_3:17613035-17613054 Msa0281990:intron 60.0%
AGTTGAACCCACGCCCTTGC+GGG - chr2_3:17613051-17613070 None:intergenic 60.0%
GAGTTGAACCCACGCCCTTG+CGG - chr2_3:17613052-17613071 None:intergenic 60.0%
! CAGGCTCAAAGAGCGCAACG+AGG - chr2_3:17613093-17613112 None:intergenic 60.0%
GCAGCAGGAGGGGATACGTT+TGG - chr2_3:17613982-17614001 None:intergenic 60.0%
! TAATCAGGGAGGTGCGTCGG+TGG + chr2_3:17615201-17615220 Msa0281990:CDS 60.0%
TCACCCCCCATGCTAAGAGC+TGG + chr2_3:17616601-17616620 Msa0281990:intron 60.0%
GAGCTACAGCCTACAGGCCA+TGG - chr2_3:17617518-17617537 None:intergenic 60.0%
ACGGCTGACCGTGTGAATGC+CGG + chr2_3:17617940-17617959 Msa0281990:three_prime_UTR 60.0%
AATCCCGGGTCACCACCTCC+CGG + chr2_3:17610969-17610988 Msa0281990:intron 65.0%
GTTGAACCCACGCCCTTGCG+GGG - chr2_3:17613050-17613069 None:intergenic 65.0%
ACGACCGTCGCATGGTCCAG+AGG + chr2_3:17616980-17616999 Msa0281990:CDS 65.0%
CGACCGTCGCATGGTCCAGA+GGG + chr2_3:17616981-17617000 Msa0281990:CDS 65.0%
GACCGTCGCATGGTCCAGAG+GGG + chr2_3:17616982-17617001 Msa0281990:CDS 65.0%
CACCCCTCTGGACCATGCGA+CGG - chr2_3:17616987-17617006 None:intergenic 65.0%
TCGCATGGTCCAGAGGGGTG+CGG + chr2_3:17616987-17617006 Msa0281990:CDS 65.0%
CGGCTGACCGTGTGAATGCC+GGG + chr2_3:17617941-17617960 Msa0281990:three_prime_UTR 65.0%
GGCTGACCGTGTGAATGCCG+GGG + chr2_3:17617942-17617961 Msa0281990:three_prime_UTR 65.0%
ACACCGGGAGGTGGTGACCC+GGG - chr2_3:17610975-17610994 None:intergenic 70.0%
CACACCGGGAGGTGGTGACC+CGG - chr2_3:17610976-17610995 None:intergenic 70.0%
! CTCATGCCCCGCAAGGGCGT+GGG + chr2_3:17613041-17613060 Msa0281990:intron 70.0%
GCTCATGCCCCGCAAGGGCG+TGG + chr2_3:17613040-17613059 Msa0281990:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 17610536 17618012 17610536 ID=Msa0281990;Name=Msa0281990
chr2_3 mRNA 17610536 17618012 17610536 ID=Msa0281990-mRNA-1;Parent=Msa0281990;Name=Msa0281990-mRNA-1;_AED=0.10;_eAED=0.10;_QI=60|1|1|1|0.91|0.92|13|516|514
chr2_3 exon 17610536 17610611 17610536 ID=Msa0281990-mRNA-1:exon:7245;Parent=Msa0281990-mRNA-1
chr2_3 exon 17610726 17610853 17610726 ID=Msa0281990-mRNA-1:exon:7246;Parent=Msa0281990-mRNA-1
chr2_3 exon 17612048 17612206 17612048 ID=Msa0281990-mRNA-1:exon:7247;Parent=Msa0281990-mRNA-1
chr2_3 exon 17612301 17612431 17612301 ID=Msa0281990-mRNA-1:exon:7248;Parent=Msa0281990-mRNA-1
chr2_3 exon 17613798 17614031 17613798 ID=Msa0281990-mRNA-1:exon:7249;Parent=Msa0281990-mRNA-1
chr2_3 exon 17614289 17614467 17614289 ID=Msa0281990-mRNA-1:exon:7250;Parent=Msa0281990-mRNA-1
chr2_3 exon 17615197 17615297 17615197 ID=Msa0281990-mRNA-1:exon:7251;Parent=Msa0281990-mRNA-1
chr2_3 exon 17615533 17615685 17615533 ID=Msa0281990-mRNA-1:exon:7252;Parent=Msa0281990-mRNA-1
chr2_3 exon 17616034 17616089 17616034 ID=Msa0281990-mRNA-1:exon:7253;Parent=Msa0281990-mRNA-1
chr2_3 exon 17616204 17616261 17616204 ID=Msa0281990-mRNA-1:exon:7254;Parent=Msa0281990-mRNA-1
chr2_3 exon 17616970 17617090 17616970 ID=Msa0281990-mRNA-1:exon:7255;Parent=Msa0281990-mRNA-1
chr2_3 exon 17617163 17617273 17617163 ID=Msa0281990-mRNA-1:exon:7256;Parent=Msa0281990-mRNA-1
chr2_3 exon 17617399 17618012 17617399 ID=Msa0281990-mRNA-1:exon:7257;Parent=Msa0281990-mRNA-1
chr2_3 five_prime_UTR 17610536 17610595 17610536 ID=Msa0281990-mRNA-1:five_prime_utr;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17610596 17610611 17610596 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17610726 17610853 17610726 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17612048 17612206 17612048 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17612301 17612431 17612301 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17613798 17614031 17613798 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17614289 17614467 17614289 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17615197 17615297 17615197 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17615533 17615685 17615533 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17616034 17616089 17616034 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17616204 17616261 17616204 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17616970 17617090 17616970 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17617163 17617273 17617163 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 CDS 17617399 17617496 17617399 ID=Msa0281990-mRNA-1:cds;Parent=Msa0281990-mRNA-1
chr2_3 three_prime_UTR 17617497 17618012 17617497 ID=Msa0281990-mRNA-1:three_prime_utr;Parent=Msa0281990-mRNA-1
Gene Sequence

>Msa0281990

ATGCCACCAGCACGAGAGCTTCCAGGGTTCTACTTTGACCCAGAGAAGAACAGATATTTCCCTATCAAAGGTCCCATTCCTGGCTCTTCTTCTTCAAAAACCAAAACCATTACTCCAAAGCCTTCCCAACCTTCTTCCTCTCAGTTACAGGAGAAGAATAGGAGTTCTTGTAGGAAGCTTAGAAACAGAACGTCCAAGCTGCTTCAGATTAGGGAGTTAGATGGTCGTCATGTTAATGCCTCACACTATTGCAAGTGTAACTTCACTGAGGAATTCCGGAAAATACAAACCTCTCAACCTGCTGTATGGAAGTATCAGGGAACTAATAGGATAGGTATTAGTGCTTTGGAACACTTAAATGTTGATGTGCAGACAGCAGAGGGTAGATTTCGAACTGATGTTTTATTGAATGGCAGCATAAATGGCTCGCTGAGTTTTTCTGAAGTTGGAAGGATTGGGCAAAATTTCGATGATGGGGTAAAGTGGATGCCAGATTGTGTGAAGAGTCATATTAAAGGGAAAACAGATGGGCATAACGAAGTGCCAGGGCCGCTTTTCAGACCTAATGGAGCTACACTGATTATGTCTTCCAGAATATCTTGTATAAGATTGGGTCCAAACGTATCCCCTCCTGCTGCGAATGACAATCCAATTGTTGGAAATATATTATTTACTACGCTGGGATCAGAAACAGCTGGTGGATCCGTTTATACCATCAGTCTTGTTGATCCTATAGATCTTGGACCAGGAATATTGAACACATGGAGCAGACTAGAGGAAATAACGTCTTTCAATAGTACCCTTTGGACAGCTGAATACGATTATAACAGACATCGGGCTATAATTGGTACTAATCAGGGAGGTGCGTCGGTGGATCTTCAAAGTGGGACAAGGTCATGGTTTTTACGTTGTAAAAGTGATGTTTTTGCACAACAGATTGTTGATTCAGGAAATGTGATTTTATGTGGACTCAGAAATGGGGCAGTTGTCTCGGTAGATTTTCGAGAGAAAAGATTGCTTTCTAGTAGACTTACTGAGCATAGGATATCATATGTATCTTCAGATAAGAAAGTTGGAAGTTCTAAAAAAGATTGGTTCAAGCTTCAAGGAAGCATATATCCTTCACATACCATCAAGATGCCTTCATCTATATCCAGTTTGGCATCACTTCAATTTGATGATCAGTACTTCTTGGCAAGCTCCATGGATGGATCGATAAGGCTATACGACCGTCGCATGGTCCAGAGGGGTGCGGTTCAATCTTATGAAGGGCACGTGAATTCCCATACTCAAATACAGCTCGGTGTTGACCCATATGAGAGATATGTTATGTCAGGTGGAGAGGATTGCAAGCTACGGATATGGAGTATCAAGTCTGGTGAATTGCTTTTGGAGGATAAGTTCTCTAATTCAGTTCTCTCCACTGTGTGCTATCAAACATTTAATAAATTTCAAGCAAAGGAAGAAAACCAATACACACATGACTCTTCTTTAGGTGCATGGCTTGGATCACATGAAGGTCTATTCTATATGCACTGGTTATGA

Protein sequence

>Msa0281990

MPPARELPGFYFDPEKNRYFPIKGPIPGSSSSKTKTITPKPSQPSSSQLQEKNRSSCRKLRNRTSKLLQIRELDGRHVNASHYCKCNFTEEFRKIQTSQPAVWKYQGTNRIGISALEHLNVDVQTAEGRFRTDVLLNGSINGSLSFSEVGRIGQNFDDGVKWMPDCVKSHIKGKTDGHNEVPGPLFRPNGATLIMSSRISCIRLGPNVSPPAANDNPIVGNILFTTLGSETAGGSVYTISLVDPIDLGPGILNTWSRLEEITSFNSTLWTAEYDYNRHRAIIGTNQGGASVDLQSGTRSWFLRCKSDVFAQQIVDSGNVILCGLRNGAVVSVDFREKRLLSSRLTEHRISYVSSDKKVGSSKKDWFKLQGSIYPSHTIKMPSSISSLASLQFDDQYFLASSMDGSIRLYDRRMVQRGAVQSYEGHVNSHTQIQLGVDPYERYVMSGGEDCKLRIWSIKSGELLLEDKFSNSVLSTVCYQTFNKFQAKEENQYTHDSSLGAWLGSHEGLFYMHWL*