Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404010 | GAU20710.1 | 73.016 | 126 | 32 | 1 | 1 | 126 | 15 | 138 | 6.62e-59 | 192 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404010 | sp|Q84W04|CNIH4_ARATH | 59.184 | 98 | 38 | 1 | 1 | 96 | 1 | 98 | 2.02e-34 | 122 |
| Msa1404010 | sp|Q84W04|CNIH4_ARATH | 51.190 | 84 | 34 | 3 | 144 | 220 | 54 | 137 | 1.41e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404010 | B7FJU3 | 81.818 | 66 | 11 | 1 | 156 | 220 | 72 | 137 | 7.24e-26 | 107 |
| Msa1404010 | B7FJU3 | 89.362 | 94 | 10 | 0 | 1 | 94 | 1 | 94 | 6.41e-52 | 174 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa1404010 | 0.801384 | 9.235718e-49 | -8.615850e-47 |
| Msa0004860 | Msa1404010 | 0.827341 | 1.650757e-54 | -8.615850e-47 |
| Msa0004980 | Msa1404010 | 0.822459 | 2.342128e-53 | -8.615850e-47 |
| Msa0008090 | Msa1404010 | 0.806456 | 8.153022e-50 | -8.615850e-47 |
| Msa0014800 | Msa1404010 | 0.814526 | 1.472886e-51 | -8.615850e-47 |
| Msa0015300 | Msa1404010 | 0.808189 | 3.500525e-50 | -8.615850e-47 |
| Msa0020300 | Msa1404010 | 0.803599 | 3.228110e-49 | -8.615850e-47 |
| Msa0032260 | Msa1404010 | 0.821573 | 3.757744e-53 | -8.615850e-47 |
| Msa0047980 | Msa1404010 | 0.866685 | 2.379428e-65 | -8.615850e-47 |
| Msa0057140 | Msa1404010 | 0.806256 | 8.985264e-50 | -8.615850e-47 |
| Msa0064350 | Msa1404010 | 0.832245 | 1.055018e-55 | -8.615850e-47 |
| Msa0073480 | Msa1404010 | 0.802026 | 6.821214e-49 | -8.615850e-47 |
| Msa0073670 | Msa1404010 | 0.811539 | 6.656056e-51 | -8.615850e-47 |
| Msa0076000 | Msa1404010 | 0.813018 | 3.165505e-51 | -8.615850e-47 |
| Msa0082280 | Msa1404010 | 0.816392 | 5.661392e-52 | -8.615850e-47 |
| Msa0084940 | Msa1404010 | 0.808165 | 3.540818e-50 | -8.615850e-47 |
| Msa0087290 | Msa1404010 | 0.800924 | 1.147003e-48 | -8.615850e-47 |
| Msa0091570 | Msa1404010 | 0.805762 | 1.141277e-49 | -8.615850e-47 |
| Msa0094470 | Msa1404010 | 0.804085 | 2.558063e-49 | -8.615850e-47 |
| Msa0094920 | Msa1404010 | 0.823699 | 1.203279e-53 | -8.615850e-47 |
| Msa0095010 | Msa1404010 | 0.805605 | 1.231569e-49 | -8.615850e-47 |
| Msa0113750 | Msa1404010 | 0.803275 | 3.766968e-49 | -8.615850e-47 |
| Msa0115390 | Msa1404010 | 0.824023 | 1.010382e-53 | -8.615850e-47 |
| Msa1344850 | Msa1404010 | 0.804247 | 2.366945e-49 | -8.615850e-47 |
| Msa1345450 | Msa1404010 | 0.803027 | 4.240664e-49 | -8.615850e-47 |
| Msa1361520 | Msa1404010 | 0.832550 | 8.865519e-56 | -8.615850e-47 |
| Msa1364910 | Msa1404010 | 0.803596 | 3.232976e-49 | -8.615850e-47 |
| Msa1367880 | Msa1404010 | 0.802495 | 5.460155e-49 | -8.615850e-47 |
| Msa1370860 | Msa1404010 | 0.818241 | 2.172375e-52 | -8.615850e-47 |
| Msa1372580 | Msa1404010 | 0.802643 | 5.089940e-49 | -8.615850e-47 |
| Msa1375990 | Msa1404010 | 0.821551 | 3.802705e-53 | -8.615850e-47 |
| Msa1385770 | Msa1404010 | 0.825667 | 4.136323e-54 | -8.615850e-47 |
| Msa1392200 | Msa1404010 | 0.838168 | 3.375652e-57 | -8.615850e-47 |
| Msa1393740 | Msa1404010 | 0.831172 | 1.941058e-55 | -8.615850e-47 |
| Msa1397810 | Msa1404010 | 0.822981 | 1.770553e-53 | -8.615850e-47 |
| Msa1403580 | Msa1404010 | -0.802124 | 6.510414e-49 | -8.615850e-47 |
| Msa1404010 | Msa1404190 | 0.849001 | 4.277290e-60 | -8.615850e-47 |
| Msa1404010 | Msa1409240 | 0.821518 | 3.868881e-53 | -8.615850e-47 |
| Msa1404010 | Msa1423910 | 0.804466 | 2.131777e-49 | -8.615850e-47 |
| Msa1404010 | Msa1431040 | 0.835992 | 1.214787e-56 | -8.615850e-47 |
| Msa1404010 | Msa1434140 | 0.825570 | 4.362683e-54 | -8.615850e-47 |
| Msa1404010 | Msa1435750 | 0.805134 | 1.545859e-49 | -8.615850e-47 |
| Msa1404010 | Msa1440000 | 0.812413 | 4.292163e-51 | -8.615850e-47 |
| Msa1404010 | Msa1442850 | 0.812812 | 3.510994e-51 | -8.615850e-47 |
| Msa1404010 | Msa1448630 | 0.810811 | 9.572360e-51 | -8.615850e-47 |
| Msa1404010 | Msa1448690 | 0.803605 | 3.218622e-49 | -8.615850e-47 |
| Msa1404010 | Msa1450280 | 0.818666 | 1.740128e-52 | -8.615850e-47 |
| Msa1404010 | Msa1453080 | 0.844240 | 8.547249e-59 | -8.615850e-47 |
| Msa1404010 | Msa1460470 | 0.806460 | 8.139561e-50 | -8.615850e-47 |
| Msa1404010 | Msa1461280 | 0.825978 | 3.491186e-54 | -8.615850e-47 |
| Msa1404010 | Msa1465080 | 0.832458 | 9.347669e-56 | -8.615850e-47 |
| Msa0610390 | Msa1404010 | 0.801105 | 1.053383e-48 | -8.615850e-47 |
| Msa0615870 | Msa1404010 | 0.805309 | 1.420642e-49 | -8.615850e-47 |
| Msa0619070 | Msa1404010 | 0.815546 | 8.747284e-52 | -8.615850e-47 |
| Msa0623700 | Msa1404010 | 0.819665 | 1.030939e-52 | -8.615850e-47 |
| Msa0625280 | Msa1404010 | 0.809203 | 2.124497e-50 | -8.615850e-47 |
| Msa0641190 | Msa1404010 | 0.808073 | 3.704490e-50 | -8.615850e-47 |
| Msa0647490 | Msa1404010 | 0.849233 | 3.688908e-60 | -8.615850e-47 |
| Msa0650190 | Msa1404010 | 0.803996 | 2.669454e-49 | -8.615850e-47 |
| Msa0650920 | Msa1404010 | 0.817221 | 3.690744e-52 | -8.615850e-47 |
| Msa0654760 | Msa1404010 | -0.802887 | 4.531770e-49 | -8.615850e-47 |
| Msa0661300 | Msa1404010 | 0.805043 | 1.615189e-49 | -8.615850e-47 |
| Msa0661620 | Msa1404010 | 0.815063 | 1.120037e-51 | -8.615850e-47 |
| Msa0663900 | Msa1404010 | 0.836125 | 1.123990e-56 | -8.615850e-47 |
| Msa0673470 | Msa1404010 | 0.815476 | 9.067463e-52 | -8.615850e-47 |
| Msa0680240 | Msa1404010 | 0.805415 | 1.349604e-49 | -8.615850e-47 |
| Msa0682780 | Msa1404010 | 0.835888 | 1.291067e-56 | -8.615850e-47 |
| Msa0687630 | Msa1404010 | 0.857146 | 1.990324e-62 | -8.615850e-47 |
| Msa0689500 | Msa1404010 | 0.800111 | 1.680199e-48 | -8.615850e-47 |
| Msa0690160 | Msa1404010 | 0.865665 | 5.008418e-65 | -8.615850e-47 |
| Msa0692840 | Msa1404010 | 0.832566 | 8.787204e-56 | -8.615850e-47 |
| Msa0692940 | Msa1404010 | 0.847950 | 8.357971e-60 | -8.615850e-47 |
| Msa0697940 | Msa1404010 | 0.804320 | 2.285902e-49 | -8.615850e-47 |
| Msa0703230 | Msa1404010 | 0.823630 | 1.248804e-53 | -8.615850e-47 |
| Msa0706960 | Msa1404010 | 0.810675 | 1.024335e-50 | -8.615850e-47 |
| Msa0709500 | Msa1404010 | 0.800362 | 1.493364e-48 | -8.615850e-47 |
| Msa0713820 | Msa1404010 | 0.833313 | 5.730171e-56 | -8.615850e-47 |
| Msa0718740 | Msa1404010 | 0.817319 | 3.507657e-52 | -8.615850e-47 |
| Msa0724830 | Msa1404010 | 0.805072 | 1.592559e-49 | -8.615850e-47 |
| Msa0747700 | Msa1404010 | 0.814080 | 1.848547e-51 | -8.615850e-47 |
| Msa0750430 | Msa1404010 | 0.807306 | 5.392349e-50 | -8.615850e-47 |
| Msa0751480 | Msa1404010 | 0.811843 | 5.716327e-51 | -8.615850e-47 |
| Msa0756060 | Msa1404010 | 0.810002 | 1.431228e-50 | -8.615850e-47 |
| Msa0763070 | Msa1404010 | 0.809840 | 1.551054e-50 | -8.615850e-47 |
| Msa0771720 | Msa1404010 | 0.801391 | 9.206104e-49 | -8.615850e-47 |
| Msa0774540 | Msa1404010 | 0.808226 | 3.437542e-50 | -8.615850e-47 |
| Msa0776220 | Msa1404010 | 0.809999 | 1.433418e-50 | -8.615850e-47 |
| Msa0787750 | Msa1404010 | 0.819969 | 8.785424e-53 | -8.615850e-47 |
| Msa0790850 | Msa1404010 | 0.802667 | 5.033135e-49 | -8.615850e-47 |
| Msa0797750 | Msa1404010 | 0.839058 | 1.987774e-57 | -8.615850e-47 |
| Msa0801110 | Msa1404010 | 0.806872 | 6.662341e-50 | -8.615850e-47 |
| Msa0805500 | Msa1404010 | 0.803060 | 4.173971e-49 | -8.615850e-47 |
| Msa0806920 | Msa1404010 | 0.807519 | 4.857578e-50 | -8.615850e-47 |
| Msa0813720 | Msa1404010 | 0.802494 | 5.463251e-49 | -8.615850e-47 |
| Msa0820990 | Msa1404010 | 0.800918 | 1.150311e-48 | -8.615850e-47 |
| Msa0831870 | Msa1404010 | 0.806866 | 6.681625e-50 | -8.615850e-47 |
| Msa0833310 | Msa1404010 | 0.887137 | 1.858449e-72 | -8.615850e-47 |
| Msa0835280 | Msa1404010 | 0.829585 | 4.742246e-55 | -8.615850e-47 |
| Msa0837660 | Msa1404010 | 0.815198 | 1.045113e-51 | -8.615850e-47 |
| Msa0121590 | Msa1404010 | 0.812256 | 4.645624e-51 | -8.615850e-47 |
| Msa0127310 | Msa1404010 | 0.802875 | 4.557570e-49 | -8.615850e-47 |
| Msa0129060 | Msa1404010 | 0.805223 | 1.480639e-49 | -8.615850e-47 |
| Msa0137820 | Msa1404010 | 0.835522 | 1.597765e-56 | -8.615850e-47 |
| Msa0140110 | Msa1404010 | 0.834137 | 3.567085e-56 | -8.615850e-47 |
| Msa0140650 | Msa1404010 | 0.848944 | 4.436729e-60 | -8.615850e-47 |
| Msa0149390 | Msa1404010 | 0.805140 | 1.541175e-49 | -8.615850e-47 |
| Msa0159180 | Msa1404010 | 0.825041 | 5.819103e-54 | -8.615850e-47 |
| Msa0165950 | Msa1404010 | 0.812911 | 3.340723e-51 | -8.615850e-47 |
| Msa0174770 | Msa1404010 | 0.820211 | 7.733001e-53 | -8.615850e-47 |
| Msa0183460 | Msa1404010 | 0.823897 | 1.081508e-53 | -8.615850e-47 |
| Msa0184020 | Msa1404010 | 0.822765 | 1.988065e-53 | -8.615850e-47 |
| Msa0186890 | Msa1404010 | 0.824246 | 8.957922e-54 | -8.615850e-47 |
| Msa0187930 | Msa1404010 | 0.807429 | 5.076351e-50 | -8.615850e-47 |
| Msa0191050 | Msa1404010 | 0.819984 | 8.714748e-53 | -8.615850e-47 |
| Msa0194480 | Msa1404010 | 0.848366 | 6.416773e-60 | -8.615850e-47 |
| Msa0194540 | Msa1404010 | 0.810949 | 8.937567e-51 | -8.615850e-47 |
| Msa0199690 | Msa1404010 | 0.857831 | 1.248118e-62 | -8.615850e-47 |
| Msa0199880 | Msa1404010 | 0.843402 | 1.432596e-58 | -8.615850e-47 |
| Msa0231880 | Msa1404010 | 0.803071 | 4.153246e-49 | -8.615850e-47 |
| Msa0233350 | Msa1404010 | 0.820946 | 5.241246e-53 | -8.615850e-47 |
| Msa0236270 | Msa1404010 | 0.839613 | 1.426791e-57 | -8.615850e-47 |
| Msa0236980 | Msa1404010 | 0.806955 | 6.396137e-50 | -8.615850e-47 |
| Msa1227690 | Msa1404010 | 0.833259 | 5.911027e-56 | -8.615850e-47 |
| Msa1249870 | Msa1404010 | 0.805807 | 1.117037e-49 | -8.615850e-47 |
| Msa1254710 | Msa1404010 | 0.801861 | 7.371757e-49 | -8.615850e-47 |
| Msa1255040 | Msa1404010 | -0.815794 | 7.701335e-52 | -8.615850e-47 |
| Msa1257510 | Msa1404010 | 0.803847 | 2.866565e-49 | -8.615850e-47 |
| Msa1269300 | Msa1404010 | 0.825609 | 4.269238e-54 | -8.615850e-47 |
| Msa1270620 | Msa1404010 | 0.805690 | 1.181954e-49 | -8.615850e-47 |
| Msa1270690 | Msa1404010 | 0.812311 | 4.519591e-51 | -8.615850e-47 |
| Msa1275360 | Msa1404010 | 0.816316 | 5.889815e-52 | -8.615850e-47 |
| Msa1290190 | Msa1404010 | 0.827910 | 1.205062e-54 | -8.615850e-47 |
| Msa1295110 | Msa1404010 | 0.805039 | 1.618358e-49 | -8.615850e-47 |
| Msa1304820 | Msa1404010 | 0.847824 | 9.053492e-60 | -8.615850e-47 |
| Msa1306430 | Msa1404010 | 0.802169 | 6.372053e-49 | -8.615850e-47 |
| Msa1306990 | Msa1404010 | 0.823195 | 1.578727e-53 | -8.615850e-47 |
| Msa1307950 | Msa1404010 | 0.838075 | 3.567381e-57 | -8.615850e-47 |
| Msa1316830 | Msa1404010 | 0.800195 | 1.615282e-48 | -8.615850e-47 |
| Msa1321630 | Msa1404010 | 0.817467 | 3.247660e-52 | -8.615850e-47 |
| Msa1333110 | Msa1404010 | 0.829263 | 5.675567e-55 | -8.615850e-47 |
| Msa1335940 | Msa1404010 | 0.819312 | 1.240637e-52 | -8.615850e-47 |
| Msa1340020 | Msa1404010 | 0.830416 | 2.972505e-55 | -8.615850e-47 |
| Msa0366890 | Msa1404010 | 0.810971 | 8.838719e-51 | -8.615850e-47 |
| Msa0372660 | Msa1404010 | 0.809374 | 1.953124e-50 | -8.615850e-47 |
| Msa0372670 | Msa1404010 | 0.823370 | 1.436672e-53 | -8.615850e-47 |
| Msa0376300 | Msa1404010 | 0.817830 | 2.690886e-52 | -8.615850e-47 |
| Msa0376310 | Msa1404010 | 0.808356 | 3.224762e-50 | -8.615850e-47 |
| Msa0376690 | Msa1404010 | 0.852157 | 5.550950e-61 | -8.615850e-47 |
| Msa0378490 | Msa1404010 | 0.834571 | 2.775760e-56 | -8.615850e-47 |
| Msa0388050 | Msa1404010 | 0.805275 | 1.443938e-49 | -8.615850e-47 |
| Msa0394400 | Msa1404010 | 0.818947 | 1.502616e-52 | -8.615850e-47 |
| Msa0402330 | Msa1404010 | 0.829817 | 4.163214e-55 | -8.615850e-47 |
| Msa0413450 | Msa1404010 | 0.803738 | 3.020216e-49 | -8.615850e-47 |
| Msa0414800 | Msa1404010 | 0.823549 | 1.304958e-53 | -8.615850e-47 |
| Msa0415430 | Msa1404010 | 0.836287 | 1.022082e-56 | -8.615850e-47 |
| Msa0425220 | Msa1404010 | 0.817008 | 4.119369e-52 | -8.615850e-47 |
| Msa0426330 | Msa1404010 | 0.809281 | 2.044637e-50 | -8.615850e-47 |
| Msa0450490 | Msa1404010 | 0.807100 | 5.962113e-50 | -8.615850e-47 |
| Msa0458060 | Msa1404010 | 0.831934 | 1.259865e-55 | -8.615850e-47 |
| Msa0471590 | Msa1404010 | 0.866170 | 3.467494e-65 | -8.615850e-47 |
| Msa0481480 | Msa1404010 | 0.830451 | 2.915094e-55 | -8.615850e-47 |
| Msa1000690 | Msa1404010 | 0.814631 | 1.396682e-51 | -8.615850e-47 |
| Msa1012370 | Msa1404010 | 0.828991 | 6.608859e-55 | -8.615850e-47 |
| Msa1013040 | Msa1404010 | 0.809278 | 2.047738e-50 | -8.615850e-47 |
| Msa1019240 | Msa1404010 | 0.804199 | 2.423076e-49 | -8.615850e-47 |
| Msa1019260 | Msa1404010 | 0.813883 | 2.042400e-51 | -8.615850e-47 |
| Msa1023180 | Msa1404010 | 0.811822 | 5.776191e-51 | -8.615850e-47 |
| Msa1040890 | Msa1404010 | 0.802069 | 6.681537e-49 | -8.615850e-47 |
| Msa1043050 | Msa1404010 | 0.813509 | 2.469653e-51 | -8.615850e-47 |
| Msa1046020 | Msa1404010 | 0.807198 | 5.682201e-50 | -8.615850e-47 |
| Msa1081150 | Msa1404010 | 0.814546 | 1.458406e-51 | -8.615850e-47 |
| Msa1089840 | Msa1404010 | 0.817595 | 3.040115e-52 | -8.615850e-47 |
| Msa1091530 | Msa1404010 | 0.820076 | 8.302019e-53 | -8.615850e-47 |
| Msa1094230 | Msa1404010 | 0.812249 | 4.661719e-51 | -8.615850e-47 |
| Msa1096230 | Msa1404010 | 0.803392 | 3.563719e-49 | -8.615850e-47 |
| Msa1104210 | Msa1404010 | 0.805417 | 1.348783e-49 | -8.615850e-47 |
| Msa0241780 | Msa1404010 | 0.800357 | 1.496675e-48 | -8.615850e-47 |
| Msa0242230 | Msa1404010 | 0.834546 | 2.816162e-56 | -8.615850e-47 |
| Msa0242410 | Msa1404010 | 0.819844 | 9.384044e-53 | -8.615850e-47 |
| Msa0244270 | Msa1404010 | 0.809571 | 1.771560e-50 | -8.615850e-47 |
| Msa0244780 | Msa1404010 | 0.803108 | 4.080703e-49 | -8.615850e-47 |
| Msa0260210 | Msa1404010 | 0.820286 | 7.433168e-53 | -8.615850e-47 |
| Msa0260240 | Msa1404010 | 0.801075 | 1.068484e-48 | -8.615850e-47 |
| Msa0260280 | Msa1404010 | 0.801318 | 9.528663e-49 | -8.615850e-47 |
| Msa0260830 | Msa1404010 | 0.848441 | 6.117642e-60 | -8.615850e-47 |
| Msa0262310 | Msa1404010 | 0.807287 | 5.441431e-50 | -8.615850e-47 |
| Msa0267970 | Msa1404010 | 0.834001 | 3.856807e-56 | -8.615850e-47 |
| Msa0268130 | Msa1404010 | 0.815363 | 9.607603e-52 | -8.615850e-47 |
| Msa0280430 | Msa1404010 | 0.836448 | 9.303294e-57 | -8.615850e-47 |
| Msa0280610 | Msa1404010 | 0.815387 | 9.487329e-52 | -8.615850e-47 |
| Msa0281990 | Msa1404010 | 0.808033 | 3.778608e-50 | -8.615850e-47 |
| Msa0284820 | Msa1404010 | 0.810523 | 1.104695e-50 | -8.615850e-47 |
| Msa0291520 | Msa1404010 | 0.810112 | 1.355089e-50 | -8.615850e-47 |
| Msa0298700 | Msa1404010 | 0.810422 | 1.162144e-50 | -8.615850e-47 |
| Msa0298990 | Msa1404010 | 0.809838 | 1.552070e-50 | -8.615850e-47 |
| Msa0300120 | Msa1404010 | 0.810711 | 1.006505e-50 | -8.615850e-47 |
| Msa0304260 | Msa1404010 | 0.808311 | 3.296342e-50 | -8.615850e-47 |
| Msa0304290 | Msa1404010 | 0.816921 | 4.308714e-52 | -8.615850e-47 |
| Msa0304330 | Msa1404010 | 0.822811 | 1.939664e-53 | -8.615850e-47 |
| Msa0304590 | Msa1404010 | 0.827406 | 1.592233e-54 | -8.615850e-47 |
| Msa0304660 | Msa1404010 | 0.818844 | 1.585882e-52 | -8.615850e-47 |
| Msa0310410 | Msa1404010 | 0.802766 | 4.799976e-49 | -8.615850e-47 |
| Msa0311700 | Msa1404010 | 0.816956 | 4.232241e-52 | -8.615850e-47 |
| Msa0314720 | Msa1404010 | 0.838050 | 3.619671e-57 | -8.615850e-47 |
| Msa0323560 | Msa1404010 | 0.810271 | 1.252430e-50 | -8.615850e-47 |
| Msa0328210 | Msa1404010 | 0.811650 | 6.294976e-51 | -8.615850e-47 |
| Msa0331700 | Msa1404010 | 0.818640 | 1.763817e-52 | -8.615850e-47 |
| Msa0337650 | Msa1404010 | 0.812368 | 4.390720e-51 | -8.615850e-47 |
| Msa0343810 | Msa1404010 | 0.817302 | 3.538788e-52 | -8.615850e-47 |
| Msa0355270 | Msa1404010 | 0.832584 | 8.699164e-56 | -8.615850e-47 |
| Msa1126510 | Msa1404010 | 0.845025 | 5.250709e-59 | -8.615850e-47 |
| Msa1126770 | Msa1404010 | 0.848316 | 6.623497e-60 | -8.615850e-47 |
| Msa1127890 | Msa1404010 | 0.813793 | 2.137980e-51 | -8.615850e-47 |
| Msa1134110 | Msa1404010 | 0.826262 | 2.987977e-54 | -8.615850e-47 |
| Msa1143840 | Msa1404010 | 0.843507 | 1.343011e-58 | -8.615850e-47 |
| Msa1150710 | Msa1404010 | 0.819669 | 1.028553e-52 | -8.615850e-47 |
| Msa1165870 | Msa1404010 | 0.824682 | 7.069702e-54 | -8.615850e-47 |
| Msa1166330 | Msa1404010 | 0.828606 | 8.186013e-55 | -8.615850e-47 |
| Msa1166340 | Msa1404010 | 0.824397 | 8.252796e-54 | -8.615850e-47 |
| Msa1166860 | Msa1404010 | 0.847557 | 1.072821e-59 | -8.615850e-47 |
| Msa1166870 | Msa1404010 | 0.805579 | 1.247144e-49 | -8.615850e-47 |
| Msa1171360 | Msa1404010 | 0.800510 | 1.393210e-48 | -8.615850e-47 |
| Msa1171870 | Msa1404010 | 0.800464 | 1.423579e-48 | -8.615850e-47 |
| Msa1179950 | Msa1404010 | 0.819582 | 1.076839e-52 | -8.615850e-47 |
| Msa1179980 | Msa1404010 | 0.813101 | 3.035370e-51 | -8.615850e-47 |
| Msa1184370 | Msa1404010 | 0.829119 | 6.152910e-55 | -8.615850e-47 |
| Msa1199990 | Msa1404010 | 0.801483 | 8.815373e-49 | -8.615850e-47 |
| Msa1204250 | Msa1404010 | 0.828491 | 8.729718e-55 | -8.615850e-47 |
| Msa1210810 | Msa1404010 | 0.825482 | 4.576063e-54 | -8.615850e-47 |
| Msa1217830 | Msa1404010 | 0.806073 | 9.817103e-50 | -8.615850e-47 |
| Msa1218960 | Msa1404010 | 0.817614 | 3.009407e-52 | -8.615850e-47 |
| Msa0485120 | Msa1404010 | 0.807469 | 4.978015e-50 | -8.615850e-47 |
| Msa0485850 | Msa1404010 | 0.849590 | 2.932338e-60 | -8.615850e-47 |
| Msa0508630 | Msa1404010 | 0.810170 | 1.317093e-50 | -8.615850e-47 |
| Msa0541860 | Msa1404010 | 0.824723 | 6.915158e-54 | -8.615850e-47 |
| Msa0552810 | Msa1404010 | 0.840081 | 1.077493e-57 | -8.615850e-47 |
| Msa0568820 | Msa1404010 | 0.802639 | 5.099889e-49 | -8.615850e-47 |
| Msa0581070 | Msa1404010 | 0.841339 | 5.044302e-58 | -8.615850e-47 |
| Msa0585900 | Msa1404010 | 0.800804 | 1.213648e-48 | -8.615850e-47 |
| Msa0585960 | Msa1404010 | 0.803246 | 3.819532e-49 | -8.615850e-47 |
| Msa0594910 | Msa1404010 | 0.823568 | 1.291419e-53 | -8.615850e-47 |
| Msa0842830 | Msa1404010 | 0.842085 | 3.206016e-58 | -8.615850e-47 |
| Msa0847080 | Msa1404010 | 0.853154 | 2.881704e-61 | -8.615850e-47 |
| Msa0877410 | Msa1404010 | 0.825150 | 5.482489e-54 | -8.615850e-47 |
| Msa0900630 | Msa1404010 | 0.838171 | 3.369420e-57 | -8.615850e-47 |
| Msa0905260 | Msa1404010 | 0.806902 | 6.565782e-50 | -8.615850e-47 |
| Msa0926460 | Msa1404010 | 0.833200 | 6.114557e-56 | -8.615850e-47 |
| Msa0930140 | Msa1404010 | 0.814363 | 1.600365e-51 | -8.615850e-47 |
| Msa0933290 | Msa1404010 | 0.802953 | 4.393322e-49 | -8.615850e-47 |
| Msa0965860 | Msa1404010 | 0.829364 | 5.363820e-55 | -8.615850e-47 |
| Msa0968590 | Msa1404010 | 0.808986 | 2.364866e-50 | -8.615850e-47 |
| Msa0970520 | Msa1404010 | 0.819344 | 1.219984e-52 | -8.615850e-47 |
| Msa0974530 | Msa1404010 | 0.810586 | 1.070741e-50 | -8.615850e-47 |
| Msa0974810 | Msa1404010 | 0.842557 | 2.404826e-58 | -8.615850e-47 |
| Msa0976310 | Msa1404010 | 0.812531 | 4.045011e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404010 | MtrunA17_Chr5g0398631 | 89.362 | 94 | 10 | 0 | 1 | 94 | 1 | 94 | 1.23e-55 | 174 |
| Msa1404010 | MtrunA17_Chr5g0398631 | 81.818 | 66 | 11 | 1 | 156 | 220 | 72 | 137 | 1.39e-29 | 107 |
| Msa1404010 | MtrunA17_Chr4g0056781 | 63.529 | 85 | 31 | 0 | 1 | 85 | 1 | 85 | 2.08e-35 | 122 |
| Msa1404010 | MtrunA17_Chr4g0056781 | 74.000 | 50 | 13 | 0 | 168 | 217 | 85 | 134 | 2.35e-19 | 80.9 |
| Msa1404010 | MtrunA17_Chr7g0245821 | 46.512 | 86 | 46 | 0 | 1 | 86 | 1 | 86 | 5.60e-17 | 73.6 |
| Msa1404010 | MtrunA17_Chr7g0258171 | 44.444 | 99 | 52 | 2 | 3 | 98 | 4 | 102 | 1.88e-16 | 73.2 |
| Msa1404010 | MtrunA17_Chr1g0174201 | 43.434 | 99 | 53 | 2 | 3 | 98 | 4 | 102 | 1.50e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404010 | AT1G12390.1 | 59.184 | 98 | 38 | 1 | 1 | 96 | 1 | 98 | 2.05e-35 | 122 |
| Msa1404010 | AT1G12390.1 | 51.190 | 84 | 34 | 3 | 144 | 220 | 54 | 137 | 1.44e-18 | 79.0 |
| Msa1404010 | AT4G12090.1 | 49.524 | 105 | 48 | 2 | 1 | 100 | 1 | 105 | 5.94e-30 | 108 |
| Msa1404010 | AT1G12340.1 | 57.895 | 76 | 30 | 1 | 23 | 96 | 15 | 90 | 4.35e-26 | 98.6 |
| Msa1404010 | AT1G12340.1 | 51.190 | 84 | 34 | 3 | 144 | 220 | 46 | 129 | 2.22e-18 | 78.2 |
| Msa1404010 | AT1G62880.1 | 52.041 | 98 | 45 | 1 | 1 | 96 | 1 | 98 | 3.10e-25 | 96.3 |
| Msa1404010 | AT1G62880.1 | 50.000 | 84 | 35 | 3 | 144 | 220 | 54 | 137 | 7.47e-19 | 79.7 |
| Msa1404010 | AT3G12180.1 | 42.857 | 98 | 54 | 1 | 3 | 98 | 4 | 101 | 5.53e-18 | 77.8 |
Find 70 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTGTCGTGATTGTGAATT+TGG | 0.180840 | tig0022985:+59805 | Msa1404010:five_prime_UTR |
| GGTTATTTGCATAGTGTTAT+TGG | 0.232406 | tig0022985:+62295 | Msa1404010:three_prime_UTR |
| ACCCTCTTCTACCTTATTAC+TGG | 0.277363 | tig0022985:+60133 | Msa1404010:CDS |
| CAGTTGTTATGACAGAAAAT+TGG | 0.279923 | tig0022985:-61326 | None:intergenic |
| TTGTGGATCATGGCTGGTTT+GGG | 0.299828 | tig0022985:+61217 | Msa1404010:CDS |
| CTGGTGGCTGATGAGGGACT+TGG | 0.310468 | tig0022985:+62273 | Msa1404010:three_prime_UTR |
| TAATCCAATGGCCAGTAATA+AGG | 0.321866 | tig0022985:-60144 | None:intergenic |
| ATAGCTTGAGTATAAAATTC+AGG | 0.353657 | tig0022985:-60106 | None:intergenic |
| ACCAAAATACAGAGAAGAAA+AGG | 0.381895 | tig0022985:-61879 | None:intergenic |
| GGGAGCATGGTCGATCTCTT+TGG | 0.384720 | tig0022985:+59846 | Msa1404010:exon |
| TTTGTGGATCATGGCTGGTT+TGG | 0.388026 | tig0022985:+61216 | Msa1404010:CDS |
| ACACCAATTCTTCCTCTCAT+TGG | 0.393963 | tig0022985:-61074 | None:intergenic |
| CGGTAGATGGAAGGTGGGAG+TGG | 0.399660 | tig0022985:+61025 | Msa1404010:CDS |
| CCAGCCATGATCCACAAAAC+TGG | 0.405886 | tig0022985:-61211 | None:intergenic |
| TCTACCTTATTACTGGCCAT+TGG | 0.413737 | tig0022985:+60140 | Msa1404010:CDS |
| GAGTTGAGGAGGTCGGTAGA+TGG | 0.419737 | tig0022985:+61012 | Msa1404010:CDS |
| GGTGGGAGTGGGTGTTAAGA+TGG | 0.422238 | tig0022985:+61037 | Msa1404010:CDS |
| GAAAAGGATCTATCATATAA+TGG | 0.426984 | tig0022985:+62432 | Msa1404010:three_prime_UTR |
| AGGCGATAGCGTGCAGGTAT+TGG | 0.433595 | tig0022985:+61240 | Msa1404010:CDS |
| AAGGCATCAAAGGGAGGTGC+TGG | 0.460614 | tig0022985:+62254 | Msa1404010:intron |
| CTTTATTTATTACTGCGAAA+AGG | 0.467055 | tig0022985:+62416 | Msa1404010:three_prime_UTR |
| GGAGGTGCTGGTGGCTGATG+AGG | 0.470899 | tig0022985:+62266 | Msa1404010:three_prime_UTR |
| GTATGTGACGAGAACGAGTA+AGG | 0.471449 | tig0022985:-59898 | None:intergenic |
| GTTCCAATGAGAGGAAGAAT+TGG | 0.475347 | tig0022985:+61071 | Msa1404010:CDS |
| CTGAAATTGAAGTATAGATA+AGG | 0.478308 | tig0022985:-60184 | None:intergenic |
| ATCCATATGATTTCTCAAAA+CGG | 0.486012 | tig0022985:+60065 | Msa1404010:CDS |
| AGATATTCAACATGCTTGCA+TGG | 0.503543 | tig0022985:+61812 | Msa1404010:CDS |
| GAGGTGCTGGTGGCTGATGA+GGG | 0.504440 | tig0022985:+62267 | Msa1404010:three_prime_UTR |
| GGTAGATGGAAGGTGGGAGT+GGG | 0.506579 | tig0022985:+61026 | Msa1404010:CDS |
| TAGGATGATTTATACAACAT+TGG | 0.510697 | tig0022985:+61981 | Msa1404010:intron |
| ACTGTCGTGATTGTGAATTT+GGG | 0.513355 | tig0022985:+59806 | Msa1404010:five_prime_UTR |
| TGGTGGCTGATGAGGGACTT+GGG | 0.523099 | tig0022985:+62274 | Msa1404010:three_prime_UTR |
| TAAGGCGATGAGGAGGAAGA+AGG | 0.531347 | tig0022985:-59880 | None:intergenic |
| TGAGGAGGTCGGTAGATGGA+AGG | 0.532817 | tig0022985:+61016 | Msa1404010:CDS |
| GAGGTCGGTAGATGGAAGGT+GGG | 0.533238 | tig0022985:+61020 | Msa1404010:CDS |
| CCAAAATACAGAGAAGAAAA+GGG | 0.534935 | tig0022985:-61878 | None:intergenic |
| GGAGGTCGGTAGATGGAAGG+TGG | 0.536835 | tig0022985:+61019 | Msa1404010:CDS |
| TATTGGCCGATGTGTGCCTA+TGG | 0.539151 | tig0022985:+62312 | Msa1404010:three_prime_UTR |
| GAACGAGTAAGGCGATGAGG+AGG | 0.539215 | tig0022985:-59887 | None:intergenic |
| GTGGGTGTTAAGATGGAGAT+GGG | 0.542877 | tig0022985:+61044 | Msa1404010:CDS |
| GATGATTTATACAACATTGG+AGG | 0.543797 | tig0022985:+61984 | Msa1404010:CDS |
| TATATGGGTGAAGGCATCAA+AGG | 0.545129 | tig0022985:+62244 | Msa1404010:intron |
| GGCCAGTAATAAGGTAGAAG+AGG | 0.551310 | tig0022985:-60135 | None:intergenic |
| AGTGGGTGTTAAGATGGAGA+TGG | 0.554559 | tig0022985:+61043 | Msa1404010:CDS |
| TTTGGGAGGCGATAGCGTGC+AGG | 0.562149 | tig0022985:+61234 | Msa1404010:CDS |
| GCATGGTCGATCTCTTTGGA+TGG | 0.563006 | tig0022985:+59850 | Msa1404010:exon |
| TCACAATGAGTAATTGCAGT+TGG | 0.564711 | tig0022985:+62008 | Msa1404010:exon |
| AAGCGAGTGTGGCAGAGTTG+AGG | 0.573256 | tig0022985:+60998 | Msa1404010:CDS |
| TGGATCATGGCTGGTTTGGG+AGG | 0.575805 | tig0022985:+61220 | Msa1404010:CDS |
| GATATTCAACATGCTTGCAT+GGG | 0.580279 | tig0022985:+61813 | Msa1404010:CDS |
| GCCAGTAATAAGGTAGAAGA+GGG | 0.582613 | tig0022985:-60134 | None:intergenic |
| CGAGTGTGGCAGAGTTGAGG+AGG | 0.584522 | tig0022985:+61001 | Msa1404010:CDS |
| ACTCGTTCTCGTCACATACC+AGG | 0.584865 | tig0022985:+59902 | Msa1404010:CDS |
| AATCTGGAAATTTACTGCAG+TGG | 0.585822 | tig0022985:-62064 | None:intergenic |
| GCATCAAAGGGAGGTGCTGG+TGG | 0.587098 | tig0022985:+62257 | Msa1404010:three_prime_UTR |
| ATATGGGTGAAGGCATCAAA+GGG | 0.593483 | tig0022985:+62245 | Msa1404010:intron |
| TGTGGCAGAGTTGAGGAGGT+CGG | 0.602092 | tig0022985:+61005 | Msa1404010:CDS |
| GCAGCGACCAAACAGCATCT+CGG | 0.616324 | tig0022985:-61291 | None:intergenic |
| AAAGTTGCGGTCGTTGCACG+TGG | 0.626941 | tig0022985:+59772 | Msa1404010:five_prime_UTR |
| ATGGGCGTTGTTCCAATGAG+AGG | 0.628761 | tig0022985:+61062 | Msa1404010:CDS |
| AATCAAATTCTAGTTCTGCA+AGG | 0.631149 | tig0022985:-60036 | None:intergenic |
| AGAAGAAAGACATAATCCAA+TGG | 0.631877 | tig0022985:-60156 | None:intergenic |
| GTGCAGGTATTGGTGATGCA+AGG | 0.636482 | tig0022985:+61250 | Msa1404010:CDS |
| TGATTTGTAGAGCAAAGTTG+CGG | 0.636741 | tig0022985:+59759 | Msa1404010:five_prime_UTR |
| TTTCTCAAAACGGATAAATG+TGG | 0.639708 | tig0022985:+60075 | Msa1404010:CDS |
| CGAGAACGAGTAAGGCGATG+AGG | 0.647410 | tig0022985:-59890 | None:intergenic |
| TTGCATGGGAAAAGAAGCAA+CGG | 0.647653 | tig0022985:+61827 | Msa1404010:CDS |
| TTGGTCGCTGCAATATAACA+AGG | 0.667518 | tig0022985:+61303 | Msa1404010:CDS |
| TGGGTGAAGGCATCAAAGGG+AGG | 0.688017 | tig0022985:+62248 | Msa1404010:intron |
| GCGACCAAACAGCATCTCGG+AGG | 0.715586 | tig0022985:-61288 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTAAAAATTTAAAAGTTTA+AGG | + | tig0022985:60591-60610 | Msa1404010:intron | 10.0% |
| !!! | TTTATTTTTAAATGTTTGTT+TGG | + | tig0022985:61955-61974 | Msa1404010:intron | 10.0% |
| !!! | TGTTAATAAATCATTTGTTT+TGG | + | tig0022985:60270-60289 | Msa1404010:intron | 15.0% |
| !! | AAACAAATTTGAATTTAGAA+AGG | + | tig0022985:60620-60639 | Msa1404010:intron | 15.0% |
| !!! | TTCATGCTAATTTTTTTTAT+AGG | + | tig0022985:60651-60670 | Msa1404010:intron | 15.0% |
| !!! | TCATGCTAATTTTTTTTATA+GGG | + | tig0022985:60652-60671 | Msa1404010:intron | 15.0% |
| !! | CAAAATTTGATGTATTTATA+AGG | + | tig0022985:60715-60734 | Msa1404010:intron | 15.0% |
| !!! | ATTAACATTTTGTGAAGAAT+AGG | - | tig0022985:60257-60276 | None:intergenic | 20.0% |
| !!! | CCATTATGTCATTATTTTTT+GGG | - | tig0022985:60758-60777 | None:intergenic | 20.0% |
| !!! | TCCATTATGTCATTATTTTT+TGG | - | tig0022985:60759-60778 | None:intergenic | 20.0% |
| !!! | TTTAAAATTTGGGGTTTATT+TGG | + | tig0022985:60838-60857 | Msa1404010:intron | 20.0% |
| !!! | TTTACTTTGAGTTTGTTAAT+AGG | + | tig0022985:61183-61202 | Msa1404010:intron | 20.0% |
| !! | TTGAAACCTATTAAAAAGTT+CGG | + | tig0022985:61539-61558 | Msa1404010:intron | 20.0% |
| !! | CAGTAAGATATCTTTATATA+CGG | + | tig0022985:62185-62204 | Msa1404010:intron | 20.0% |
| !!! | ACATTATCTTTTTTATCCAT+AGG | - | tig0022985:62331-62350 | None:intergenic | 20.0% |
| !! | TTCTTTTCTTCTTCTTCTTA+AGG | + | tig0022985:59930-59949 | Msa1404010:intron | 25.0% |
| ! | ATCCATATGATTTCTCAAAA+CGG | + | tig0022985:60065-60084 | Msa1404010:CDS | 25.0% |
| ! | ATAGCTTGAGTATAAAATTC+AGG | - | tig0022985:60109-60128 | None:intergenic | 25.0% |
| ! | CTGAAATTGAAGTATAGATA+AGG | - | tig0022985:60187-60206 | None:intergenic | 25.0% |
| ! | TTGTGAAAGAACATCTTATA+AGG | - | tig0022985:60426-60445 | None:intergenic | 25.0% |
| !! | GAGCTGAAAATATGATTTTT+AGG | - | tig0022985:60518-60537 | None:intergenic | 25.0% |
| !!! | ATGTCACTTTTGTTGTTTAT+GGG | + | tig0022985:60683-60702 | Msa1404010:intron | 25.0% |
| ! | CCCAAAAAATAATGACATAA+TGG | + | tig0022985:60755-60774 | Msa1404010:intron | 25.0% |
| !!! | AAATAATGACATAATGGACT+CGG | + | tig0022985:60761-60780 | Msa1404010:intron | 25.0% |
| ! | ATCAATTTCAATCACAAAAC+TGG | - | tig0022985:61156-61175 | None:intergenic | 25.0% |
| ! | TGAAACCTATTAAAAAGTTC+GGG | + | tig0022985:61540-61559 | Msa1404010:intron | 25.0% |
| ! | TTAAATGTTTGTTTGGTTGT+AGG | + | tig0022985:61962-61981 | Msa1404010:intron | 25.0% |
| ! | TAGGATGATTTATACAACAT+TGG | + | tig0022985:61981-62000 | Msa1404010:intron | 25.0% |
| !! | AGTAAATTTCCAGATTTTTG+TGG | + | tig0022985:62071-62090 | Msa1404010:three_prime_UTR | 25.0% |
| ! | AACTTATGACTTCATGTATA+TGG | + | tig0022985:62228-62247 | Msa1404010:intron | 25.0% |
| ! | ACTTATGACTTCATGTATAT+GGG | + | tig0022985:62229-62248 | Msa1404010:intron | 25.0% |
| !! | CTTTATTTATTACTGCGAAA+AGG | + | tig0022985:62416-62435 | Msa1404010:three_prime_UTR | 25.0% |
| AAGAAGAAAAGAAGAATACC+TGG | - | tig0022985:59923-59942 | None:intergenic | 30.0% | |
| !! | AATCAAATTCTAGTTCTGCA+AGG | - | tig0022985:60039-60058 | None:intergenic | 30.0% |
| !!! | ATCCGTTTTGAGAAATCATA+TGG | - | tig0022985:60070-60089 | None:intergenic | 30.0% |
| TTTCTCAAAACGGATAAATG+TGG | + | tig0022985:60075-60094 | Msa1404010:CDS | 30.0% | |
| AGAAGAAAGACATAATCCAA+TGG | - | tig0022985:60159-60178 | None:intergenic | 30.0% | |
| !!! | CATGTCACTTTTGTTGTTTA+TGG | + | tig0022985:60682-60701 | Msa1404010:intron | 30.0% |
| !!! | TGTCACTTTTGTTGTTTATG+GGG | + | tig0022985:60684-60703 | Msa1404010:intron | 30.0% |
| !! | AATAATGACATAATGGACTC+GGG | + | tig0022985:60762-60781 | Msa1404010:intron | 30.0% |
| ! | TAAGCGGGGATTTAAAATTT+GGG | + | tig0022985:60828-60847 | Msa1404010:intron | 30.0% |
| ! | TTAATAGCAGTAGACTGTTT+TGG | + | tig0022985:60897-60916 | Msa1404010:intron | 30.0% |
| CAGTTGTTATGACAGAAAAT+TGG | - | tig0022985:61329-61348 | None:intergenic | 30.0% | |
| TCTGTCATAACAACTGAAAT+TGG | + | tig0022985:61333-61352 | Msa1404010:intron | 30.0% | |
| CTGTCATAACAACTGAAATT+GGG | + | tig0022985:61334-61353 | Msa1404010:intron | 30.0% | |
| ! | TGGGTAATAGTTATGTTTTC+TGG | + | tig0022985:61353-61372 | Msa1404010:intron | 30.0% |
| TTCTATACTCAAACGATCTT+AGG | - | tig0022985:61450-61469 | None:intergenic | 30.0% | |
| ! | CTAATCCCGAACTTTTTAAT+AGG | - | tig0022985:61548-61567 | None:intergenic | 30.0% |
| ATGCTTGACATCTTATGTAA+GGG | + | tig0022985:61704-61723 | Msa1404010:intron | 30.0% | |
| ! | CATATTTTATTCCTGTGATC+AGG | + | tig0022985:61755-61774 | Msa1404010:intron | 30.0% |
| CCAAAATACAGAGAAGAAAA+GGG | - | tig0022985:61881-61900 | None:intergenic | 30.0% | |
| ACCAAAATACAGAGAAGAAA+AGG | - | tig0022985:61882-61901 | None:intergenic | 30.0% | |
| CATAACATTGACAGATAATC+AGG | - | tig0022985:61914-61933 | None:intergenic | 30.0% | |
| GATGATTTATACAACATTGG+AGG | + | tig0022985:61984-62003 | Msa1404010:CDS | 30.0% | |
| ! | ACATGACTGACTGTATTTTT+GGG | + | tig0022985:62126-62145 | Msa1404010:three_prime_UTR | 30.0% |
| GGTTATTTGCATAGTGTTAT+TGG | + | tig0022985:62295-62314 | Msa1404010:three_prime_UTR | 30.0% | |
| ! | TGATTTGTAGAGCAAAGTTG+CGG | + | tig0022985:59759-59778 | Msa1404010:five_prime_UTR | 35.0% |
| TACTGTCGTGATTGTGAATT+TGG | + | tig0022985:59805-59824 | Msa1404010:five_prime_UTR | 35.0% | |
| ACTGTCGTGATTGTGAATTT+GGG | + | tig0022985:59806-59825 | Msa1404010:five_prime_UTR | 35.0% | |
| TAATCCAATGGCCAGTAATA+AGG | - | tig0022985:60147-60166 | None:intergenic | 35.0% | |
| ! | GTAAGCGGGGATTTAAAATT+TGG | + | tig0022985:60827-60846 | Msa1404010:intron | 35.0% |
| ! | AAGCGGGGATTTAAAATTTG+GGG | + | tig0022985:60829-60848 | Msa1404010:intron | 35.0% |
| TTTAGAAAAAGAAGCGAGTG+TGG | + | tig0022985:60987-61006 | Msa1404010:intron | 35.0% | |
| !! | AGAGGGTAGTTTTTCTAGTA+GGG | + | tig0022985:61118-61137 | Msa1404010:intron | 35.0% |
| !! | ATAGTTATGTTTTCTGGCAG+AGG | + | tig0022985:61359-61378 | Msa1404010:intron | 35.0% |
| !! | TAGTTATGTTTTCTGGCAGA+GGG | + | tig0022985:61360-61379 | Msa1404010:intron | 35.0% |
| ACAAGCATGGTTGTTAAACT+TGG | + | tig0022985:61406-61425 | Msa1404010:intron | 35.0% | |
| CAAGCATGGTTGTTAAACTT+GGG | + | tig0022985:61407-61426 | Msa1404010:intron | 35.0% | |
| ATACTCAAACGATCTTAGGT+AGG | - | tig0022985:61446-61465 | None:intergenic | 35.0% | |
| TAACTGGAACACCTATCATA+GGG | - | tig0022985:61620-61639 | None:intergenic | 35.0% | |
| GATGCTTGACATCTTATGTA+AGG | + | tig0022985:61703-61722 | Msa1404010:intron | 35.0% | |
| GTAAGGGAATGTGCTTAAAA+TGG | + | tig0022985:61720-61739 | Msa1404010:intron | 35.0% | |
| AGATATTCAACATGCTTGCA+TGG | + | tig0022985:61812-61831 | Msa1404010:CDS | 35.0% | |
| GATATTCAACATGCTTGCAT+GGG | + | tig0022985:61813-61832 | Msa1404010:CDS | 35.0% | |
| ! | CCCTTTTCTTCTCTGTATTT+TGG | + | tig0022985:61878-61897 | Msa1404010:CDS | 35.0% |
| !!! | CTCTGTATTTTGGTATGAGA+AGG | + | tig0022985:61888-61907 | Msa1404010:intron | 35.0% |
| TCACAATGAGTAATTGCAGT+TGG | + | tig0022985:62008-62027 | Msa1404010:exon | 35.0% | |
| AATCTGGAAATTTACTGCAG+TGG | - | tig0022985:62067-62086 | None:intergenic | 35.0% | |
| ! | CACATGACTGACTGTATTTT+TGG | + | tig0022985:62125-62144 | Msa1404010:three_prime_UTR | 35.0% |
| !! | CATGACTGACTGTATTTTTG+GGG | + | tig0022985:62127-62146 | Msa1404010:three_prime_UTR | 35.0% |
| !!! | TGCAAGCTTGTTTTGATAGT+TGG | + | tig0022985:62161-62180 | Msa1404010:intron | 35.0% |
| ! | TTTTATCCATAGGCACACAT+CGG | - | tig0022985:62321-62340 | None:intergenic | 35.0% |
| ACCCTCTTCTACCTTATTAC+TGG | + | tig0022985:60133-60152 | Msa1404010:CDS | 40.0% | |
| GCCAGTAATAAGGTAGAAGA+GGG | - | tig0022985:60137-60156 | None:intergenic | 40.0% | |
| TCTACCTTATTACTGGCCAT+TGG | + | tig0022985:60140-60159 | Msa1404010:CDS | 40.0% | |
| TCGAATAGAAGACCCATAAG+AGG | + | tig0022985:60800-60819 | Msa1404010:intron | 40.0% | |
| ! | TTTGGCAGCTCTAATACTGA+TGG | + | tig0022985:60856-60875 | Msa1404010:intron | 40.0% |
| GTTCCAATGAGAGGAAGAAT+TGG | + | tig0022985:61071-61090 | Msa1404010:CDS | 40.0% | |
| ACACCAATTCTTCCTCTCAT+TGG | - | tig0022985:61077-61096 | None:intergenic | 40.0% | |
| AAAACTACCCTCTCTACCTA+CGG | - | tig0022985:61111-61130 | None:intergenic | 40.0% | |
| !! | GAGAGGGTAGTTTTTCTAGT+AGG | + | tig0022985:61117-61136 | Msa1404010:intron | 40.0% |
| !! | GAGGGTAGTTTTTCTAGTAG+GGG | + | tig0022985:61119-61138 | Msa1404010:intron | 40.0% |
| ! | AATAGGCAAGTCCAGTTTTG+TGG | + | tig0022985:61200-61219 | Msa1404010:intron | 40.0% |
| !! | AAGTCCAGTTTTGTGGATCA+TGG | + | tig0022985:61207-61226 | Msa1404010:CDS | 40.0% |
| TTGGTCGCTGCAATATAACA+AGG | + | tig0022985:61303-61322 | Msa1404010:CDS | 40.0% | |
| TGGTTGTTAAACTTGGGAGT+CGG | + | tig0022985:61413-61432 | Msa1404010:intron | 40.0% | |
| TCAAACGATCTTAGGTAGGT+GGG | - | tig0022985:61442-61461 | None:intergenic | 40.0% | |
| TCTTGAAACCACCCTATGAT+AGG | + | tig0022985:61606-61625 | Msa1404010:intron | 40.0% | |
| CTAACTGGAACACCTATCAT+AGG | - | tig0022985:61621-61640 | None:intergenic | 40.0% | |
| ATGATAGGTGTTCCAGTTAG+AGG | + | tig0022985:61621-61640 | Msa1404010:intron | 40.0% | |
| GTGTTCCAGTTAGAGGATTT+GGG | + | tig0022985:61628-61647 | Msa1404010:intron | 40.0% | |
| TGTTCCAGTTAGAGGATTTG+GGG | + | tig0022985:61629-61648 | Msa1404010:intron | 40.0% | |
| ! | TTTTGTCTGTACCTGATCAC+AGG | - | tig0022985:61769-61788 | None:intergenic | 40.0% |
| TTGCATGGGAAAAGAAGCAA+CGG | + | tig0022985:61827-61846 | Msa1404010:CDS | 40.0% | |
| !!! | GCAGTTGGTTACTTGTTTTG+TGG | + | tig0022985:62023-62042 | Msa1404010:three_prime_UTR | 40.0% |
| TGCTCTCTACCACAAAAATC+TGG | - | tig0022985:62083-62102 | None:intergenic | 40.0% | |
| GACTTCATGTATATGGGTGA+AGG | + | tig0022985:62235-62254 | Msa1404010:intron | 40.0% | |
| !! | TATATGGGTGAAGGCATCAA+AGG | + | tig0022985:62244-62263 | Msa1404010:intron | 40.0% |
| !! | ATATGGGTGAAGGCATCAAA+GGG | + | tig0022985:62245-62264 | Msa1404010:intron | 40.0% |
| GTATGTGACGAGAACGAGTA+AGG | - | tig0022985:59901-59920 | None:intergenic | 45.0% | |
| GGCCAGTAATAAGGTAGAAG+AGG | - | tig0022985:60138-60157 | None:intergenic | 45.0% | |
| CCGCTTACTAAGCCTCTTAT+GGG | - | tig0022985:60815-60834 | None:intergenic | 45.0% | |
| CCCATAAGAGGCTTAGTAAG+CGG | + | tig0022985:60812-60831 | Msa1404010:intron | 45.0% | |
| CCATAAGAGGCTTAGTAAGC+GGG | + | tig0022985:60813-60832 | Msa1404010:intron | 45.0% | |
| CATAAGAGGCTTAGTAAGCG+GGG | + | tig0022985:60814-60833 | Msa1404010:intron | 45.0% | |
| AGTGGGTGTTAAGATGGAGA+TGG | + | tig0022985:61043-61062 | Msa1404010:CDS | 45.0% | |
| GTGGGTGTTAAGATGGAGAT+GGG | + | tig0022985:61044-61063 | Msa1404010:CDS | 45.0% | |
| AACAATTGCCGTAGGTAGAG+AGG | + | tig0022985:61100-61119 | Msa1404010:intron | 45.0% | |
| ACAATTGCCGTAGGTAGAGA+GGG | + | tig0022985:61101-61120 | Msa1404010:intron | 45.0% | |
| ! | TTTGTGGATCATGGCTGGTT+TGG | + | tig0022985:61216-61235 | Msa1404010:CDS | 45.0% |
| !! | TTGTGGATCATGGCTGGTTT+GGG | + | tig0022985:61217-61236 | Msa1404010:CDS | 45.0% |
| ! | TTTTCCTCCGAGATGCTGTT+TGG | + | tig0022985:61284-61303 | Msa1404010:CDS | 45.0% |
| !! | TTATGTTTTCTGGCAGAGGG+TGG | + | tig0022985:61363-61382 | Msa1404010:intron | 45.0% |
| GGTTGTTAAACTTGGGAGTC+GGG | + | tig0022985:61414-61433 | Msa1404010:intron | 45.0% | |
| CTCAAACGATCTTAGGTAGG+TGG | - | tig0022985:61443-61462 | None:intergenic | 45.0% | |
| GGTGTTCCAGTTAGAGGATT+TGG | + | tig0022985:61627-61646 | Msa1404010:intron | 45.0% | |
| ATCTCCCCAAATCCTCTAAC+TGG | - | tig0022985:61636-61655 | None:intergenic | 45.0% | |
| GCATGGTCGATCTCTTTGGA+TGG | + | tig0022985:59850-59869 | Msa1404010:exon | 50.0% | |
| TAAGGCGATGAGGAGGAAGA+AGG | - | tig0022985:59883-59902 | None:intergenic | 50.0% | |
| ACTCGTTCTCGTCACATACC+AGG | + | tig0022985:59902-59921 | Msa1404010:CDS | 50.0% | |
| CCCGCTTACTAAGCCTCTTA+TGG | - | tig0022985:60816-60835 | None:intergenic | 50.0% | |
| ! | GGCAGCTCTAATACTGATGG+TGG | + | tig0022985:60859-60878 | Msa1404010:intron | 50.0% |
| ! | ATGGGCGTTGTTCCAATGAG+AGG | + | tig0022985:61062-61081 | Msa1404010:CDS | 50.0% |
| CCAGCCATGATCCACAAAAC+TGG | - | tig0022985:61214-61233 | None:intergenic | 50.0% | |
| !! | CCAGTTTTGTGGATCATGGC+TGG | + | tig0022985:61211-61230 | Msa1404010:CDS | 50.0% |
| !! | GTGCAGGTATTGGTGATGCA+AGG | + | tig0022985:61250-61269 | Msa1404010:CDS | 50.0% |
| TTCTGGCAGAGGGTGGTTTA+AGG | + | tig0022985:61370-61389 | Msa1404010:intron | 50.0% | |
| AAGGCTGCGACAAACAAGCA+TGG | + | tig0022985:61393-61412 | Msa1404010:intron | 50.0% | |
| GGGTGGTTTCAAGAGATCGA+AGG | - | tig0022985:61600-61619 | None:intergenic | 50.0% | |
| CTGGAACACCTATCATAGGG+TGG | - | tig0022985:61617-61636 | None:intergenic | 50.0% | |
| TATTGGCCGATGTGTGCCTA+TGG | + | tig0022985:62312-62331 | Msa1404010:three_prime_UTR | 50.0% | |
| AAAGTTGCGGTCGTTGCACG+TGG | + | tig0022985:59772-59791 | Msa1404010:five_prime_UTR | 55.0% | |
| TGGGAGAGAGAGAGAGAGAG+AGG | + | tig0022985:59825-59844 | Msa1404010:five_prime_UTR | 55.0% | |
| GGGAGAGAGAGAGAGAGAGA+GGG | + | tig0022985:59826-59845 | Msa1404010:five_prime_UTR | 55.0% | |
| AGAGAGAGAGAGAGGGAGCA+TGG | + | tig0022985:59833-59852 | Msa1404010:exon | 55.0% | |
| ! | GGGAGCATGGTCGATCTCTT+TGG | + | tig0022985:59846-59865 | Msa1404010:exon | 55.0% |
| GAACGAGTAAGGCGATGAGG+AGG | - | tig0022985:59890-59909 | None:intergenic | 55.0% | |
| CGAGAACGAGTAAGGCGATG+AGG | - | tig0022985:59893-59912 | None:intergenic | 55.0% | |
| AAGCGAGTGTGGCAGAGTTG+AGG | + | tig0022985:60998-61017 | Msa1404010:CDS | 55.0% | |
| TGTGGCAGAGTTGAGGAGGT+CGG | + | tig0022985:61005-61024 | Msa1404010:CDS | 55.0% | |
| GAGTTGAGGAGGTCGGTAGA+TGG | + | tig0022985:61012-61031 | Msa1404010:CDS | 55.0% | |
| TGAGGAGGTCGGTAGATGGA+AGG | + | tig0022985:61016-61035 | Msa1404010:CDS | 55.0% | |
| GAGGTCGGTAGATGGAAGGT+GGG | + | tig0022985:61020-61039 | Msa1404010:CDS | 55.0% | |
| GGTAGATGGAAGGTGGGAGT+GGG | + | tig0022985:61026-61045 | Msa1404010:CDS | 55.0% | |
| GGTGGGAGTGGGTGTTAAGA+TGG | + | tig0022985:61037-61056 | Msa1404010:CDS | 55.0% | |
| ! | GGTGTCGCAACAATTGCCGT+AGG | + | tig0022985:61092-61111 | Msa1404010:intron | 55.0% |
| !! | TGGATCATGGCTGGTTTGGG+AGG | + | tig0022985:61220-61239 | Msa1404010:CDS | 55.0% |
| AGGCGATAGCGTGCAGGTAT+TGG | + | tig0022985:61240-61259 | Msa1404010:CDS | 55.0% | |
| GCAGCGACCAAACAGCATCT+CGG | - | tig0022985:61294-61313 | None:intergenic | 55.0% | |
| GGCAGAGGGTGGTTTAAGGA+AGG | + | tig0022985:61374-61393 | Msa1404010:intron | 55.0% | |
| !! | TGGGTGAAGGCATCAAAGGG+AGG | + | tig0022985:62248-62267 | Msa1404010:intron | 55.0% |
| ! | AAGGCATCAAAGGGAGGTGC+TGG | + | tig0022985:62254-62273 | Msa1404010:intron | 55.0% |
| TGGTGGCTGATGAGGGACTT+GGG | + | tig0022985:62274-62293 | Msa1404010:three_prime_UTR | 55.0% | |
| CGAGTGTGGCAGAGTTGAGG+AGG | + | tig0022985:61001-61020 | Msa1404010:CDS | 60.0% | |
| GGAGGTCGGTAGATGGAAGG+TGG | + | tig0022985:61019-61038 | Msa1404010:CDS | 60.0% | |
| CGGTAGATGGAAGGTGGGAG+TGG | + | tig0022985:61025-61044 | Msa1404010:CDS | 60.0% | |
| TTTGGGAGGCGATAGCGTGC+AGG | + | tig0022985:61234-61253 | Msa1404010:CDS | 60.0% | |
| GCGACCAAACAGCATCTCGG+AGG | - | tig0022985:61291-61310 | None:intergenic | 60.0% | |
| !! | GCATCAAAGGGAGGTGCTGG+TGG | + | tig0022985:62257-62276 | Msa1404010:three_prime_UTR | 60.0% |
| !! | GAGGTGCTGGTGGCTGATGA+GGG | + | tig0022985:62267-62286 | Msa1404010:three_prime_UTR | 60.0% |
| CTGGTGGCTGATGAGGGACT+TGG | + | tig0022985:62273-62292 | Msa1404010:three_prime_UTR | 60.0% | |
| !! | GGAGGTGCTGGTGGCTGATG+AGG | + | tig0022985:62266-62285 | Msa1404010:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022985 | gene | 59747 | 62451 | 59747 | ID=Msa1404010;Name=Msa1404010 |
| tig0022985 | mRNA | 59747 | 62451 | 59747 | ID=Msa1404010-mRNA-1;Parent=Msa1404010;Name=Msa1404010-mRNA-1;_AED=0.30;_eAED=0.30;_QI=105|0.5|0.71|0.71|0.83|0.71|7|323|220 |
| tig0022985 | exon | 59747 | 59923 | 59747 | ID=Msa1404010-mRNA-1:exon:19555;Parent=Msa1404010-mRNA-1 |
| tig0022985 | exon | 60028 | 60209 | 60028 | ID=Msa1404010-mRNA-1:exon:19556;Parent=Msa1404010-mRNA-1 |
| tig0022985 | exon | 60992 | 61109 | 60992 | ID=Msa1404010-mRNA-1:exon:19557;Parent=Msa1404010-mRNA-1 |
| tig0022985 | exon | 61205 | 61335 | 61205 | ID=Msa1404010-mRNA-1:exon:19558;Parent=Msa1404010-mRNA-1 |
| tig0022985 | exon | 61777 | 61899 | 61777 | ID=Msa1404010-mRNA-1:exon:19559;Parent=Msa1404010-mRNA-1 |
| tig0022985 | exon | 61984 | 62148 | 61984 | ID=Msa1404010-mRNA-1:exon:19560;Parent=Msa1404010-mRNA-1 |
| tig0022985 | exon | 62257 | 62451 | 62257 | ID=Msa1404010-mRNA-1:exon:19561;Parent=Msa1404010-mRNA-1 |
| tig0022985 | five_prime_UTR | 59747 | 59851 | 59747 | ID=Msa1404010-mRNA-1:five_prime_utr;Parent=Msa1404010-mRNA-1 |
| tig0022985 | CDS | 59852 | 59923 | 59852 | ID=Msa1404010-mRNA-1:cds;Parent=Msa1404010-mRNA-1 |
| tig0022985 | CDS | 60028 | 60209 | 60028 | ID=Msa1404010-mRNA-1:cds;Parent=Msa1404010-mRNA-1 |
| tig0022985 | CDS | 60992 | 61109 | 60992 | ID=Msa1404010-mRNA-1:cds;Parent=Msa1404010-mRNA-1 |
| tig0022985 | CDS | 61205 | 61335 | 61205 | ID=Msa1404010-mRNA-1:cds;Parent=Msa1404010-mRNA-1 |
| tig0022985 | CDS | 61777 | 61899 | 61777 | ID=Msa1404010-mRNA-1:cds;Parent=Msa1404010-mRNA-1 |
| tig0022985 | CDS | 61984 | 62020 | 61984 | ID=Msa1404010-mRNA-1:cds;Parent=Msa1404010-mRNA-1 |
| tig0022985 | three_prime_UTR | 62021 | 62148 | 62021 | ID=Msa1404010-mRNA-1:three_prime_utr;Parent=Msa1404010-mRNA-1 |
| tig0022985 | three_prime_UTR | 62257 | 62451 | 62257 | ID=Msa1404010-mRNA-1:three_prime_utr;Parent=Msa1404010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
