AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0282480


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0282480 MtrunA17_Chr2g0297251 97.674 258 3 2 1 255 1 258 0.0 516
Msa0282480 MtrunA17_Chr4g0065041 45.098 255 109 6 27 254 1 251 2.95e-62 196
Msa0282480 MtrunA17_Chr7g0230511 43.388 242 118 5 31 254 6 246 3.57e-58 185
Msa0282480 MtrunA17_Chr4g0040071 35.526 228 106 6 34 254 15 208 3.55e-39 135
Msa0282480 MtrunA17_Chr5g0395181 33.778 225 109 4 34 255 21 208 4.06e-38 132
Msa0282480 MtrunA17_Chr5g0411151 33.761 234 110 5 31 254 32 230 5.01e-37 130
Msa0282480 MtrunA17_Chr8g0366581 44.615 130 71 1 31 159 30 159 2.89e-36 128
Msa0282480 MtrunA17_Chr1g0179781 33.628 226 120 5 32 255 5 202 4.76e-36 127
Msa0282480 MtrunA17_Chr4g0052451 72.619 84 17 1 84 161 10 93 5.37e-36 123
Msa0282480 MtrunA17_Chr7g0265291 34.498 229 115 5 32 255 5 203 1.01e-34 124
Msa0282480 MtrunA17_Chr4g0052461 73.611 72 14 1 16 87 9 75 7.91e-34 117
Msa0282480 MtrunA17_Chr2g0320521 39.869 153 77 5 25 166 1 149 2.67e-26 102
Msa0282480 MtrunA17_Chr2g0320561 38.776 147 79 4 36 171 6 152 3.72e-25 99.8
Msa0282480 MtrunA17_Chr2g0320551 36.842 152 85 4 32 172 2 153 2.74e-23 92.8
Msa0282480 MtrunA17_Chr4g0020811 40.000 150 69 6 25 160 1 143 2.78e-23 92.4
Msa0282480 MtrunA17_Chr2g0308401 40.559 143 68 5 32 160 2 141 1.43e-22 90.5
Msa0282480 MtrunA17_Chr8g0392151 34.194 155 80 4 26 159 5 158 8.65e-21 88.2
Msa0282480 MtrunA17_Chr5g0434331 32.090 134 84 4 33 162 42 172 4.96e-15 71.6
Msa0282480 MtrunA17_Chr8g0386511 33.333 117 74 2 72 184 4 120 2.38e-14 68.6
Msa0282480 MtrunA17_Chr1g0161601 44.048 84 45 2 28 111 42 123 1.14e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0282480 AT1G31040.1 61.905 231 75 5 33 255 18 243 2.38e-96 282
Msa0282480 AT3G60670.1 42.437 238 120 3 34 254 7 244 2.65e-57 183
Msa0282480 AT2G12646.3 40.392 255 117 4 32 254 1 252 1.05e-55 179
Msa0282480 AT2G12646.1 39.922 258 120 4 29 254 1 255 7.45e-55 177
Msa0282480 AT2G12646.2 39.922 258 120 4 29 254 1 255 7.45e-55 177
Msa0282480 AT1G43000.2 35.242 227 126 5 32 254 14 223 5.68e-37 130
Msa0282480 AT1G43000.1 35.242 227 126 5 32 254 7 216 6.78e-37 130
Msa0282480 AT1G21000.2 34.298 242 127 6 34 254 13 243 2.90e-36 129
Msa0282480 AT1G21000.1 34.298 242 127 6 34 254 16 246 3.16e-36 129
Msa0282480 AT2G01818.1 48.148 135 60 3 35 159 12 146 7.30e-35 125
Msa0282480 AT1G32700.1 45.669 127 68 1 34 159 12 138 2.36e-34 123
Msa0282480 AT4G17900.1 45.038 131 70 2 31 159 31 161 3.54e-34 123
Msa0282480 AT4G17900.2 45.038 131 70 2 31 159 17 147 8.51e-34 122
Msa0282480 AT1G76590.1 44.615 130 71 1 34 162 18 147 1.01e-33 122
Msa0282480 AT2G27930.1 44.681 141 67 3 33 162 3 143 1.82e-33 120
Msa0282480 AT2G27930.4 44.681 141 67 3 33 162 3 143 1.82e-33 120
Msa0282480 AT2G27930.3 45.000 140 66 3 33 161 3 142 2.71e-33 119
Msa0282480 AT2G27930.2 45.000 140 66 3 33 161 3 142 2.71e-33 119
Msa0282480 AT5G46710.2 44.286 140 76 2 27 164 21 160 3.11e-33 119
Msa0282480 AT5G46710.1 45.185 135 72 2 27 159 21 155 9.37e-33 119
Msa0282480 AT5G46710.3 45.802 131 69 2 31 159 9 139 1.68e-32 118
Msa0282480 AT1G32700.2 46.465 99 52 1 62 159 1 99 4.35e-25 98.2
Msa0282480 AT2G27930.5 45.455 88 39 1 84 162 59 146 1.10e-18 81.6
Msa0282480 AT2G27930.6 45.455 88 39 1 84 162 59 146 1.10e-18 81.6
Msa0282480 AT2G01818.2 49.351 77 33 2 89 159 6 82 1.33e-16 75.1

Find 70 sgRNAs with CRISPR-Local

Find 627 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATATATTATTAATTATT+TGG 0.104291 2_3:+18482734 Msa0282480:three_prime_UTR
TCTGTTGGATTTGTTCTTCT+TGG 0.221070 2_3:-18482582 None:intergenic
TGTTGCTGGTGGCCTCTTCT+TGG 0.257102 2_3:-18482553 None:intergenic
AATAGTAATAGTAGTAATAA+TGG 0.299404 2_3:-18482678 None:intergenic
ATTTGGCATAAAAGTTACTA+TGG 0.306006 2_3:+18482751 Msa0282480:three_prime_UTR
TTTGCACTGTTAATAGTATA+GGG 0.310183 2_3:-18476301 None:intergenic
CCTGGCATTGTCCTCTCTCT+TGG 0.334179 2_3:+18482611 Msa0282480:CDS
AATAGTAGTAATAATGGTTT+AGG 0.344553 2_3:-18482672 None:intergenic
CACTTGTGACAGGATTCTTC+AGG 0.345103 2_3:+18476387 Msa0282480:CDS
CATTGATTGTTCTAATATAC+AGG 0.353712 2_3:+18475900 Msa0282480:CDS
TTGATGGATGAAACATTCTT+TGG 0.372131 2_3:+18471414 Msa0282480:CDS
TAGGATAGTGGGGCCCTTTG+AGG 0.381993 2_3:-18482653 None:intergenic
CGTAATTCGATTGGATGATC+TGG 0.385003 2_3:+18475870 Msa0282480:CDS
GTAATAATGGTTTAGGATAG+TGG 0.420638 2_3:-18482665 None:intergenic
CGTTCTTCCTTCGATTCTTG+TGG 0.423267 2_3:-18471449 None:intergenic
ATAAGTGCAGGTGGATTTCA+TGG 0.424549 2_3:+18482373 Msa0282480:intron
CGATTTGATGAATCTGACTT+AGG 0.432856 2_3:+18482431 Msa0282480:CDS
GGCCTCTTCTTGGTGAGTGA+TGG 0.433860 2_3:-18482543 None:intergenic
TGCATGAGAGAGAACAGAAA+TGG 0.450248 2_3:-18476417 None:intergenic
TGCTTCTCATCCTCTTCTCC+AGG 0.455215 2_3:+18471533 Msa0282480:CDS
GAAACATTCTTTGGTGATTG+TGG 0.465089 2_3:+18471423 Msa0282480:CDS
AAACATTCTTTGGTGATTGT+GGG 0.470651 2_3:+18471424 Msa0282480:CDS
TTACAACAACGTAATTCGAT+TGG 0.478043 2_3:+18475861 Msa0282480:CDS
CCAAGAGAGAGGACAATGCC+AGG 0.479103 2_3:-18482611 None:intergenic
ATGCTTGCTTCACTTGTGAC+AGG 0.483376 2_3:+18476377 Msa0282480:CDS
ATCAACCTCTCTAGCCATGC+AGG 0.486614 2_3:-18471396 None:intergenic
GCAATTCGAGGGACTAAGAA+TGG 0.489732 2_3:+18482460 Msa0282480:CDS
GAAGAAAAGGTGCTCCTCAA+AGG 0.491867 2_3:+18482639 Msa0282480:CDS
ATCAAATCGATGTAAAATGT+TGG 0.496431 2_3:-18482417 None:intergenic
TCTCTTGGAAGCAGAAGAAA+AGG 0.496815 2_3:+18482626 Msa0282480:CDS
ATGGAGTAATTAGAAGAACT+TGG 0.498349 2_3:-18482524 None:intergenic
TTTCTGTTCTCTCTCATGCA+AGG 0.498493 2_3:+18476420 Msa0282480:CDS
TAATAATGGTTTAGGATAGT+GGG 0.503746 2_3:-18482664 None:intergenic
GAGAGAGAACAGAAATGGAA+TGG 0.509323 2_3:-18476412 None:intergenic
AGAGAGAACAGAAATGGAAT+GGG 0.519403 2_3:-18476411 None:intergenic
AAGAAAAGGTGCTCCTCAAA+GGG 0.524805 2_3:+18482640 Msa0282480:CDS
ACTTTGCATGACTTTGATTG+TGG 0.529762 2_3:-18476346 None:intergenic
CTTAGGAATATCGCAATTCG+AGG 0.531509 2_3:+18482448 Msa0282480:CDS
TTCTTCTGCTTCCAAGAGAG+AGG 0.533226 2_3:-18482622 None:intergenic
TGAAACCTGCATGGCTAGAG+AGG 0.557873 2_3:+18471391 Msa0282480:CDS
TTCGAGGGACTAAGAATGGA+TGG 0.559888 2_3:+18482464 Msa0282480:CDS
AGCATGAGAAGATAAGCAGT+GGG 0.561028 2_3:-18471514 None:intergenic
ATCATCATCAAGAGGAGACA+TGG 0.562949 2_3:+18471344 Msa0282480:CDS
TGCATGGCTAGAGAGGTTGA+TGG 0.563271 2_3:+18471398 Msa0282480:CDS
AATGCCAGGGAGGAATCTGT+TGG 0.577735 2_3:-18482597 None:intergenic
CTCCATCACTCACCAAGAAG+AGG 0.578593 2_3:+18482541 Msa0282480:CDS
TAATATAATACCTGGAGAAG+AGG 0.580127 2_3:-18471543 None:intergenic
GTCACAAGTGAAGCAAGCAT+TGG 0.580435 2_3:-18476374 None:intergenic
TCATGATGCTGTAGGTGAGA+AGG 0.582777 2_3:+18475833 Msa0282480:intron
TATGGTGAGAGACATGATGA+TGG 0.586578 2_3:+18471296 Msa0282480:exon
TCAATTTCATCATCATCAAG+AGG 0.600549 2_3:+18471336 Msa0282480:CDS
ACTAAGAATGGATGGATCTG+AGG 0.607142 2_3:+18482472 Msa0282480:CDS
AAGCATGAGAAGATAAGCAG+TGG 0.608759 2_3:-18471515 None:intergenic
AACATTCTTTGGTGATTGTG+GGG 0.611739 2_3:+18471425 Msa0282480:CDS
TGGAGTAATTAGAAGAACTT+GGG 0.613997 2_3:-18482523 None:intergenic
GTGGGGTCCACAAGAATCGA+AGG 0.615814 2_3:+18471442 Msa0282480:CDS
GATGAAGATAACAACCACAT+TGG 0.616337 2_3:+18482500 Msa0282480:CDS
CATGAGAAGATAAGCAGTGG+GGG 0.623874 2_3:-18471512 None:intergenic
TAGAAGAACTTGGGCCAATG+TGG 0.628681 2_3:-18482514 None:intergenic
AAATCCAACAGATTCCTCCC+TGG 0.630961 2_3:+18482593 Msa0282480:CDS
CAAGAGAGAGGACAATGCCA+GGG 0.632298 2_3:-18482610 None:intergenic
TTAGGAATATCGCAATTCGA+GGG 0.644008 2_3:+18482449 Msa0282480:CDS
GAGAGAGGACAATGCCAGGG+AGG 0.651378 2_3:-18482607 None:intergenic
AATAATGGTTTAGGATAGTG+GGG 0.654932 2_3:-18482663 None:intergenic
ATGGTGAGAGACATGATGAT+GGG 0.662021 2_3:+18471297 Msa0282480:CDS
GGTGGATTTCATGGTATACG+AGG 0.668694 2_3:+18482382 Msa0282480:intron
ATCAAGAGGAGACATGGACA+TGG 0.680821 2_3:+18471350 Msa0282480:CDS
TGATGAATATGAAACCTGCA+TGG 0.699453 2_3:+18471382 Msa0282480:CDS
GTGGATTTCATGGTATACGA+GGG 0.708036 2_3:+18482383 Msa0282480:CDS
GCATGAGAAGATAAGCAGTG+GGG 0.713738 2_3:-18471513 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTATTAAAAAATAATA+TGG + chr2_3:18471278-18471297 Msa0282480:exon 0.0%
!! AAAAAAATTAAATTATAAAA+GGG - chr2_3:18473259-18473278 None:intergenic 0.0%
!! TAAAAAAATTAAATTATAAA+AGG - chr2_3:18473260-18473279 None:intergenic 0.0%
!! AAAAAAATATAAAATAAATA+GGG + chr2_3:18474688-18474707 Msa0282480:intron 0.0%
!! AAAATATATTATATATAATA+GGG + chr2_3:18475680-18475699 Msa0282480:intron 0.0%
!! AAAATATATTAAATAAAAAA+AGG - chr2_3:18481125-18481144 None:intergenic 0.0%
!! AATATATATTATTAATTATT+TGG + chr2_3:18482734-18482753 Msa0282480:three_prime_UTR 0.0%
!! TATAATATAACCAAAAATAA+GGG - chr2_3:18471674-18471693 None:intergenic 10.0%
!! ATATAATATAACCAAAAATA+AGG - chr2_3:18471675-18471694 None:intergenic 10.0%
!!! TTATTTTTGGTTATATTATA+TGG + chr2_3:18471674-18471693 Msa0282480:intron 10.0%
!!! AATTATTGTGAAATTATTTT+TGG + chr2_3:18472188-18472207 Msa0282480:intron 10.0%
!!! AATTTGTTTATAATTTATTC+TGG - chr2_3:18472509-18472528 None:intergenic 10.0%
!! TTTATATTGAAAATTGAAAA+AGG + chr2_3:18473047-18473066 Msa0282480:intron 10.0%
!! TATGTTGATATATATAAAAA+TGG + chr2_3:18475593-18475612 Msa0282480:intron 10.0%
!!! TTACTATTTTTTTTTTTGAA+TGG + chr2_3:18475656-18475675 Msa0282480:intron 10.0%
!!! AAACAAATAAATTTTTCAAT+GGG - chr2_3:18475757-18475776 None:intergenic 10.0%
!!! TAAACAAATAAATTTTTCAA+TGG - chr2_3:18475758-18475777 None:intergenic 10.0%
!! ACTAAATTATAGTTATTTAA+AGG + chr2_3:18476077-18476096 Msa0282480:intron 10.0%
!!! ATTTTTTTTTTTTTTTTGTG+AGG + chr2_3:18476225-18476244 Msa0282480:intron 10.0%
!! AAAAATTTATATTTGTATAG+TGG + chr2_3:18477636-18477655 Msa0282480:intron 10.0%
!! TAAATACATTTATCTATAAA+TGG - chr2_3:18478119-18478138 None:intergenic 10.0%
!! GTAAAAAAAAATTATCATAT+CGG + chr2_3:18478427-18478446 Msa0282480:intron 10.0%
!! TAGTAAAAAAAAAAACAATT+AGG + chr2_3:18478516-18478535 Msa0282480:intron 10.0%
!!! CAACAATTTTATTTTAATTA+AGG - chr2_3:18481148-18481167 None:intergenic 10.0%
!! TAAGTTTGATTATATTAAAA+TGG - chr2_3:18481182-18481201 None:intergenic 10.0%
!! AAAATTGTGTGAAATTAATA+GGG - chr2_3:18471576-18471595 None:intergenic 15.0%
!! AAAAATTGTGTGAAATTAAT+AGG - chr2_3:18471577-18471596 None:intergenic 15.0%
!! ACAAAAATTGTAGAAAAAAA+AGG - chr2_3:18471949-18471968 None:intergenic 15.0%
!! TTCAATTAAATATTCCAAAA+AGG - chr2_3:18472124-18472143 None:intergenic 15.0%
!!! TTATTTTTGGATGTTTTTAT+TGG + chr2_3:18472201-18472220 Msa0282480:intron 15.0%
!! GAAATTAAAGTATACTATAA+TGG + chr2_3:18472295-18472314 Msa0282480:intron 15.0%
!! TTAGTTATAGATGATAATTT+AGG + chr2_3:18472699-18472718 Msa0282480:intron 15.0%
!! CATAAAAATCTTATCATTAA+AGG - chr2_3:18472976-18472995 None:intergenic 15.0%
!! CATAAAAATCTTATCATTAA+AGG - chr2_3:18472976-18472995 None:intergenic 15.0%
!! TGTTTATGCATATTTATATA+TGG + chr2_3:18473405-18473424 Msa0282480:intron 15.0%
!! GTAAACTATTACTATAAAAA+AGG - chr2_3:18473895-18473914 None:intergenic 15.0%
!!! TTTTTGTTTATAATTTAGGA+CGG - chr2_3:18473923-18473942 None:intergenic 15.0%
!!! AATGTAAAAACAATTTTCAT+TGG - chr2_3:18474101-18474120 None:intergenic 15.0%
!!! ATCTTTGAAATAAGTTTTAT+AGG - chr2_3:18474126-18474145 None:intergenic 15.0%
!!! TGTTAATTTTTCATATTTCA+AGG + chr2_3:18474424-18474443 Msa0282480:intron 15.0%
!! AAATTAACTTTATCTCTTAA+AGG - chr2_3:18474634-18474653 None:intergenic 15.0%
!! ATCAACATTAAATACTATAT+TGG - chr2_3:18474663-18474682 None:intergenic 15.0%
!! GAAAAATTAAATAATGTACT+TGG + chr2_3:18474721-18474740 Msa0282480:intron 15.0%
!! TCAAAACAATCTTATATTTA+GGG + chr2_3:18474784-18474803 Msa0282480:intron 15.0%
!! TTGACAAATTATATATTCTT+AGG - chr2_3:18474905-18474924 None:intergenic 15.0%
!!! AGTCAAAAATTAATTTTTCT+CGG + chr2_3:18474939-18474958 Msa0282480:intron 15.0%
!! TGTCTTAAAAATACATATTA+AGG - chr2_3:18474988-18475007 None:intergenic 15.0%
!! TGTTTATAATAATGACTATA+TGG + chr2_3:18475317-18475336 Msa0282480:intron 15.0%
!! TTAAAAATAATCAACAATGT+TGG - chr2_3:18475562-18475581 None:intergenic 15.0%
!! ATATATATAAAAATGGAAAG+TGG + chr2_3:18475600-18475619 Msa0282480:intron 15.0%
!!! GTGTATTTTTATTTTCTTTT+TGG - chr2_3:18475727-18475746 None:intergenic 15.0%
!! TTTAGTAGCATATATTAAAT+TGG - chr2_3:18476063-18476082 None:intergenic 15.0%
!! ATCAATTCATTTATTCAAAT+CGG + chr2_3:18476513-18476532 Msa0282480:intron 15.0%
!!! TATTTCTTAAACCTTTTTTT+TGG + chr2_3:18477198-18477217 Msa0282480:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG - chr2_3:18477238-18477257 None:intergenic 15.0%
!!! ATTCCATAATTTTTTTTGAA+AGG + chr2_3:18477590-18477609 Msa0282480:intron 15.0%
!! AATCCTTTCAAAAAAAATTA+TGG - chr2_3:18477596-18477615 None:intergenic 15.0%
!!! TTATTTTTATTTAGGAGAAA+AGG + chr2_3:18478183-18478202 Msa0282480:intron 15.0%
!!! TATTTTTATTTAGGAGAAAA+GGG + chr2_3:18478184-18478203 Msa0282480:intron 15.0%
!!! AAATCATTTGTTAAAAATTG+TGG + chr2_3:18478291-18478310 Msa0282480:intron 15.0%
!!! AATCATTTGTTAAAAATTGT+GGG + chr2_3:18478292-18478311 Msa0282480:intron 15.0%
!!! TTTTTTTTAACTAAATCTAG+CGG + chr2_3:18478640-18478659 Msa0282480:intron 15.0%
!!! AAATTATACTTTTCTCTTTT+TGG + chr2_3:18478689-18478708 Msa0282480:intron 15.0%
!!! TATTTTAACATAATAGAGAA+GGG - chr2_3:18478807-18478826 None:intergenic 15.0%
!!! ATATTTTAACATAATAGAGA+AGG - chr2_3:18478808-18478827 None:intergenic 15.0%
!! TCTCTATTATGTTAAAATAT+AGG + chr2_3:18478808-18478827 Msa0282480:intron 15.0%
!!! AATTTAAAGATTTTTGAAGT+AGG + chr2_3:18479168-18479187 Msa0282480:intron 15.0%
!! AAAATAAAGAAACAAAATTG+AGG + chr2_3:18480172-18480191 Msa0282480:intron 15.0%
!!! TGTATATATTTTAATATGTG+AGG + chr2_3:18481307-18481326 Msa0282480:intron 15.0%
!! AATAGTAATAGTAGTAATAA+TGG - chr2_3:18482681-18482700 None:intergenic 15.0%
!! GTATGATATAATATAATACC+TGG - chr2_3:18471554-18471573 None:intergenic 20.0%
!!! TATATGTAAACCCTTATTTT+TGG + chr2_3:18471661-18471680 Msa0282480:intron 20.0%
!! AAAAGGACTAATTAGTAATT+AGG - chr2_3:18471932-18471951 None:intergenic 20.0%
!! AGAGAAATTATAATCAAAGA+AGG - chr2_3:18472043-18472062 None:intergenic 20.0%
!!! GGTTTTTTTTAAATCCTTTT+TGG + chr2_3:18472107-18472126 Msa0282480:intron 20.0%
!! TTGGAATATTTAATTGAACA+TGG + chr2_3:18472126-18472145 Msa0282480:intron 20.0%
!!! TATACTTTAATTTCCAGATT+GGG - chr2_3:18472289-18472308 None:intergenic 20.0%
!! TGTTTATAATTTATTCTGGA+AGG - chr2_3:18472505-18472524 None:intergenic 20.0%
!!! TATAAGTTTTTAAGTTCTTG+AGG + chr2_3:18473155-18473174 Msa0282480:intron 20.0%
!! TTTATTATCTTATGTCCTTA+GGG + chr2_3:18473218-18473237 Msa0282480:intron 20.0%
!! ATATGCATAAACATAGATAT+GGG - chr2_3:18473398-18473417 None:intergenic 20.0%
!! AATATGCATAAACATAGATA+TGG - chr2_3:18473399-18473418 None:intergenic 20.0%
!! ATTTATATATGGTTTCCATA+AGG + chr2_3:18473416-18473435 Msa0282480:intron 20.0%
!! TTTATATATGGTTTCCATAA+GGG + chr2_3:18473417-18473436 Msa0282480:intron 20.0%
!! AAAAGAGATCTTCTATTAAT+GGG - chr2_3:18473493-18473512 None:intergenic 20.0%
!! AAAAAGAGATCTTCTATTAA+TGG - chr2_3:18473494-18473513 None:intergenic 20.0%
!! TGTGCAAAAGATTAAATATA+GGG - chr2_3:18473605-18473624 None:intergenic 20.0%
!! ATAATTTAAATAGAAGTGGT+GGG - chr2_3:18473632-18473651 None:intergenic 20.0%
!! AATAATTTAAATAGAAGTGG+TGG - chr2_3:18473633-18473652 None:intergenic 20.0%
!! AGGAATAATTTAAATAGAAG+TGG - chr2_3:18473636-18473655 None:intergenic 20.0%
!!! TTTTTTTCCTCTTGAATTTA+TGG + chr2_3:18473676-18473695 Msa0282480:intron 20.0%
!!! AATGAAATGCAACATTTTTT+GGG - chr2_3:18473783-18473802 None:intergenic 20.0%
!!! TAATGAAATGCAACATTTTT+TGG - chr2_3:18473784-18473803 None:intergenic 20.0%
!!! CAAAAAATTATCTTTTCCAA+AGG + chr2_3:18474015-18474034 Msa0282480:intron 20.0%
!! TGATTATAGAGAAAATGAAA+AGG - chr2_3:18474074-18474093 None:intergenic 20.0%
!! CATTCAATTAATGATGTATA+TGG + chr2_3:18474204-18474223 Msa0282480:intron 20.0%
!!! TTTTTACTTATAATATGGGA+CGG + chr2_3:18474353-18474372 Msa0282480:intron 20.0%
!!! TAATTCCTATTTTTCCTAAA+GGG - chr2_3:18474553-18474572 None:intergenic 20.0%
!!! TTAATTCCTATTTTTCCTAA+AGG - chr2_3:18474554-18474573 None:intergenic 20.0%
!! CTCAAAACAATCTTATATTT+AGG + chr2_3:18474783-18474802 Msa0282480:intron 20.0%
!!! TGTAAAGTAGTCTTATAAAA+AGG + chr2_3:18474841-18474860 Msa0282480:intron 20.0%
!!! GTAAAGTAGTCTTATAAAAA+GGG + chr2_3:18474842-18474861 Msa0282480:intron 20.0%
!! TTAATGAAATCTTGTAAACT+TGG - chr2_3:18475458-18475477 None:intergenic 20.0%
!! ATGAAGAAAATAATAGAGAA+AGG + chr2_3:18475515-18475534 Msa0282480:intron 20.0%
!!! AAATTTTTCAATGGGTATTT+TGG - chr2_3:18475749-18475768 None:intergenic 20.0%
!! AAATCAAAATTGAGATCATT+AGG + chr2_3:18475964-18475983 Msa0282480:intron 20.0%
!!! CGTTTTTTATACATTGTTTT+TGG + chr2_3:18476155-18476174 Msa0282480:intron 20.0%
!!! AAGTGATATTTTTAAATCAG+AGG + chr2_3:18476323-18476342 Msa0282480:CDS 20.0%
!! AAACAAACATTACAATAAGA+CGG + chr2_3:18476715-18476734 Msa0282480:intron 20.0%
!! AATATAAACCTCATGATATT+AGG + chr2_3:18477073-18477092 Msa0282480:intron 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG - chr2_3:18477324-18477343 None:intergenic 20.0%
!! TTCAAAAAAAAAAATGCAAG+CGG - chr2_3:18477375-18477394 None:intergenic 20.0%
!! AAATAATATAACATAAGGTG+TGG + chr2_3:18477675-18477694 Msa0282480:intron 20.0%
!!! AAATGGTAATTTTAAGTAGT+TGG - chr2_3:18478102-18478121 None:intergenic 20.0%
!!! TATGATTTGTTACACTAAAA+TGG + chr2_3:18478376-18478395 Msa0282480:intron 20.0%
!!! TTTTTTTAACTAAATCTAGC+GGG + chr2_3:18478641-18478660 Msa0282480:intron 20.0%
!!! CTTTTTTTTACTAAATCTAG+CGG + chr2_3:18478714-18478733 Msa0282480:intron 20.0%
!!! TTTTTTTTACTAAATCTAGC+GGG + chr2_3:18478715-18478734 Msa0282480:intron 20.0%
!!! GAAACCTAGTATATATTTTA+GGG - chr2_3:18479235-18479254 None:intergenic 20.0%
!!! TGAAACCTAGTATATATTTT+AGG - chr2_3:18479236-18479255 None:intergenic 20.0%
!!! AAGGTGTTGTATATTTTTTA+TGG - chr2_3:18479296-18479315 None:intergenic 20.0%
!!! CTATTATATTTTGCGTAAAT+AGG - chr2_3:18479319-18479338 None:intergenic 20.0%
!! TGATTCATTGTTGAATTATA+TGG + chr2_3:18479369-18479388 Msa0282480:intron 20.0%
!!! TGTGTAGATTTTATCAAAAA+GGG - chr2_3:18479400-18479419 None:intergenic 20.0%
!!! TTAAGAGTATGTTTTACAAA+TGG - chr2_3:18481502-18481521 None:intergenic 20.0%
!! TAGTTAATTGTTAACATTTG+AGG + chr2_3:18481694-18481713 Msa0282480:intron 20.0%
!! ATTCATCATAGTAATACAAA+CGG - chr2_3:18482094-18482113 None:intergenic 20.0%
!! TTGTATTACTATGATGAATT+AGG + chr2_3:18482095-18482114 Msa0282480:intron 20.0%
!! ATAAATAAATACATAAGTGC+AGG + chr2_3:18482361-18482380 Msa0282480:intron 20.0%
!! AATAGTAGTAATAATGGTTT+AGG - chr2_3:18482675-18482694 None:intergenic 20.0%
! TAATCAATTGAAGTTGACAA+GGG - chr2_3:18471739-18471758 None:intergenic 25.0%
! TTAATCAATTGAAGTTGACA+AGG - chr2_3:18471740-18471759 None:intergenic 25.0%
! TGTCAACTTCAATTGATTAA+AGG + chr2_3:18471740-18471759 Msa0282480:intron 25.0%
! GTCAACTTCAATTGATTAAA+GGG + chr2_3:18471741-18471760 Msa0282480:intron 25.0%
!! TGATTATCTTTTCATGTTCT+TGG + chr2_3:18471826-18471845 Msa0282480:intron 25.0%
! GATATCCATCAAACAATAAA+AGG - chr2_3:18471871-18471890 None:intergenic 25.0%
!! TTTATTGTTTGATGGATATC+TGG + chr2_3:18471871-18471890 Msa0282480:intron 25.0%
! TAATTAGTAATTAGGTAGCT+AGG - chr2_3:18471924-18471943 None:intergenic 25.0%
! GTTTGCAGATAAAAAATATG+AGG - chr2_3:18472232-18472251 None:intergenic 25.0%
!! GTATACTTTAATTTCCAGAT+TGG - chr2_3:18472290-18472309 None:intergenic 25.0%
! TAATGGAAAGAAAAAAAGTG+AGG + chr2_3:18472312-18472331 Msa0282480:intron 25.0%
!! TTTTCTTAATTTCACTCATG+AGG + chr2_3:18472340-18472359 Msa0282480:intron 25.0%
! AGTTGTAAAGTTGAAATTGT+TGG + chr2_3:18472380-18472399 Msa0282480:intron 25.0%
! GTTGTAAAGTTGAAATTGTT+GGG + chr2_3:18472381-18472400 Msa0282480:intron 25.0%
! TTGTAAAGTTGAAATTGTTG+GGG + chr2_3:18472382-18472401 Msa0282480:intron 25.0%
! GTTTATTATCTTATGTCCTT+AGG + chr2_3:18473217-18473236 Msa0282480:intron 25.0%
! ATATAAACAAATTGTGCGTT+TGG - chr2_3:18473304-18473323 None:intergenic 25.0%
! TATGCATAAACATAGATATG+GGG - chr2_3:18473397-18473416 None:intergenic 25.0%
!!! TATACTTGGTTCTTACTTTT+TGG + chr2_3:18473454-18473473 Msa0282480:intron 25.0%
! CTGTGCAAAAGATTAAATAT+AGG - chr2_3:18473606-18473625 None:intergenic 25.0%
!! CTATATTTAATCTTTTGCAC+AGG + chr2_3:18473604-18473623 Msa0282480:intron 25.0%
! ATTAAATGAAGTGTGAAATG+AGG - chr2_3:18473656-18473675 None:intergenic 25.0%
! ATTGAGAGGATTTAAATGAA+GGG - chr2_3:18473746-18473765 None:intergenic 25.0%
! AATTGAGAGGATTTAAATGA+AGG - chr2_3:18473747-18473766 None:intergenic 25.0%
!!! CTTTGCATTTAATTTTCCTT+TGG - chr2_3:18474034-18474053 None:intergenic 25.0%
! CATTCATTAAATGATGTATG+TGG - chr2_3:18474243-18474262 None:intergenic 25.0%
!! ACATTGATAATATTGATGAG+AGG + chr2_3:18474450-18474469 Msa0282480:intron 25.0%
!! CTCTTTTTATAAGACTCATT+TGG - chr2_3:18474752-18474771 None:intergenic 25.0%
! GACTGAGGTAATAATATTTA+GGG + chr2_3:18474806-18474825 Msa0282480:intron 25.0%
!!! ATTGGTTTTCTAACATCATT+TGG + chr2_3:18475078-18475097 Msa0282480:intron 25.0%
!! TCTATTATTTTCTTCATGTG+GGG - chr2_3:18475512-18475531 None:intergenic 25.0%
!! CTCTATTATTTTCTTCATGT+GGG - chr2_3:18475513-18475532 None:intergenic 25.0%
!! TCTCTATTATTTTCTTCATG+TGG - chr2_3:18475514-18475533 None:intergenic 25.0%
! AAGAAAATAATAGAGAAAGG+AGG + chr2_3:18475518-18475537 Msa0282480:intron 25.0%
!!! TTCTTTTTGGTGTAATACTT+GGG - chr2_3:18475714-18475733 None:intergenic 25.0%
!!! TTTCTTTTTGGTGTAATACT+TGG - chr2_3:18475715-18475734 None:intergenic 25.0%
! CATTATTGGTAAGTCAAATA+AGG - chr2_3:18475792-18475811 None:intergenic 25.0%
! GAAATGAAAACTCTCATTAT+TGG - chr2_3:18475806-18475825 None:intergenic 25.0%
!! CATTGATTGTTCTAATATAC+AGG + chr2_3:18475900-18475919 Msa0282480:CDS 25.0%
! AACAAAGTGAGATTGTTTAT+TGG + chr2_3:18475929-18475948 Msa0282480:intron 25.0%
! TTAAAGGAAAATGCTTGTAT+CGG + chr2_3:18476093-18476112 Msa0282480:intron 25.0%
!!! AGTTTTTGATTGTGTTGTAT+TGG + chr2_3:18476271-18476290 Msa0282480:intron 25.0%
! TTTGCACTGTTAATAGTATA+GGG - chr2_3:18476304-18476323 None:intergenic 25.0%
!! TTTTGCACTGTTAATAGTAT+AGG - chr2_3:18476305-18476324 None:intergenic 25.0%
! AAGAAAGGAGAAAGAAAAAT+GGG - chr2_3:18476454-18476473 None:intergenic 25.0%
! AAAGAAAGGAGAAAGAAAAA+TGG - chr2_3:18476455-18476474 None:intergenic 25.0%
!!! TTCTTTCTCCTTTCTTTTTT+TGG + chr2_3:18476458-18476477 Msa0282480:intron 25.0%
! AATTGAGACCAAAAAAAGAA+AGG - chr2_3:18476469-18476488 None:intergenic 25.0%
! GAAACAAATACACAAAACAT+CGG + chr2_3:18476548-18476567 Msa0282480:intron 25.0%
!! GTCTTATTGTAATGTTTGTT+TGG - chr2_3:18476716-18476735 None:intergenic 25.0%
! TGAAGAAATTGTGTTAAAAC+CGG + chr2_3:18476787-18476806 Msa0282480:intron 25.0%
! ATTATCTTACATCTGCAAAA+TGG - chr2_3:18476860-18476879 None:intergenic 25.0%
! TGATCATGTTACTGAATAAT+TGG - chr2_3:18477027-18477046 None:intergenic 25.0%
!! GATCACATAGATAAAGTTTT+CGG + chr2_3:18477042-18477061 Msa0282480:intron 25.0%
!! ATCACATAGATAAAGTTTTC+GGG + chr2_3:18477043-18477062 Msa0282480:intron 25.0%
! AAAATTCACCTAATATCATG+AGG - chr2_3:18477084-18477103 None:intergenic 25.0%
! GATGATAAAAGAAGATAAAG+AGG + chr2_3:18477134-18477153 Msa0282480:intron 25.0%
!! TGTGAAGTTTTCCAAAAAAA+AGG - chr2_3:18477212-18477231 None:intergenic 25.0%
! AACTCGTAAGATCATTAATA+TGG - chr2_3:18477412-18477431 None:intergenic 25.0%
! TGATAATAATTCGTTTCACA+AGG + chr2_3:18477498-18477517 Msa0282480:intron 25.0%
! GGTAAAAAAAAATATAGCAG+TGG + chr2_3:18478014-18478033 Msa0282480:intron 25.0%
! TAGGCATATAAATGTTTACA+TGG + chr2_3:18478535-18478554 Msa0282480:intron 25.0%
! AGTATCTTACAAAAGAGAAA+AGG - chr2_3:18478773-18478792 None:intergenic 25.0%
! TAAAATATAGGCAGATTCTA+TGG + chr2_3:18478820-18478839 Msa0282480:intron 25.0%
!!! ATCTAAAATTTTGAGTGCAT+TGG + chr2_3:18478846-18478865 Msa0282480:intron 25.0%
!!! TATATTTTAGGGAACTTCTA+CGG - chr2_3:18479224-18479243 None:intergenic 25.0%
! AGTTCCCTAAAATATATACT+AGG + chr2_3:18479228-18479247 Msa0282480:intron 25.0%
!! TATATTTTGCGTAAATAGGA+AGG - chr2_3:18479315-18479334 None:intergenic 25.0%
!!! AATGAATCATTTTTCTTGTG+AGG - chr2_3:18479358-18479377 None:intergenic 25.0%
!! GTGTGTAGATTTTATCAAAA+AGG - chr2_3:18479401-18479420 None:intergenic 25.0%
! TGTTTGTGAGATATACAAAT+TGG + chr2_3:18479750-18479769 Msa0282480:intron 25.0%
!!! AAATCTACTTATTTTCTCCT+TGG + chr2_3:18480269-18480288 Msa0282480:intron 25.0%
!!! AATCTACTTATTTTCTCCTT+GGG + chr2_3:18480270-18480289 Msa0282480:intron 25.0%
! AGATTTAAATTTAGCCCAAA+GGG - chr2_3:18480363-18480382 None:intergenic 25.0%
!! AAAAAGTGATCAATTTTCGT+CGG - chr2_3:18480509-18480528 None:intergenic 25.0%
! TTCTTTCTATATTCTCTTTG+TGG - chr2_3:18480533-18480552 None:intergenic 25.0%
! AAAGAAAGAAGAGAAATAGA+GGG + chr2_3:18480561-18480580 Msa0282480:intron 25.0%
!!! ACGTTTTTTTACCACATTTA+TGG - chr2_3:18480683-18480702 None:intergenic 25.0%
!!! TAAAGTTTGTTAAAAACGTG+TGG + chr2_3:18480704-18480723 Msa0282480:intron 25.0%
! TTACTGGATTTATGTTCAAT+TGG + chr2_3:18481002-18481021 Msa0282480:intron 25.0%
!! AAAAAGGAAGTACAAAAAGT+TGG - chr2_3:18481109-18481128 None:intergenic 25.0%
! AGATGCTTGAATTCTATTAA+GGG - chr2_3:18481234-18481253 None:intergenic 25.0%
! GGAGAGAAAAATGTAATTTA+AGG + chr2_3:18481328-18481347 Msa0282480:intron 25.0%
! CATACAAACAAAGTACAATT+TGG + chr2_3:18481571-18481590 Msa0282480:intron 25.0%
!! ATACAAGACATTAACGTTTT+AGG - chr2_3:18482182-18482201 None:intergenic 25.0%
! TAACCTAACATGTATAATGT+TGG + chr2_3:18482217-18482236 Msa0282480:intron 25.0%
!!! TACTCATTTTTGTCTATACT+TGG + chr2_3:18482278-18482297 Msa0282480:intron 25.0%
! ATCAAATCGATGTAAAATGT+TGG - chr2_3:18482420-18482439 None:intergenic 25.0%
!! TAATAATGGTTTAGGATAGT+GGG - chr2_3:18482667-18482686 None:intergenic 25.0%
! ATTTGGCATAAAAGTTACTA+TGG + chr2_3:18482751-18482770 Msa0282480:three_prime_UTR 25.0%
TCAATTTCATCATCATCAAG+AGG + chr2_3:18471336-18471355 Msa0282480:CDS 30.0%
! TTGATGGATGAAACATTCTT+TGG + chr2_3:18471414-18471433 Msa0282480:CDS 30.0%
! AAACATTCTTTGGTGATTGT+GGG + chr2_3:18471424-18471443 Msa0282480:CDS 30.0%
TAATATAATACCTGGAGAAG+AGG - chr2_3:18471546-18471565 None:intergenic 30.0%
AATCAATTGAAGTTGACAAG+GGG - chr2_3:18471738-18471757 None:intergenic 30.0%
AATTGAAAAGTTTCACGTGA+TGG + chr2_3:18471765-18471784 Msa0282480:intron 30.0%
! TAGGTCCTTTTATTGTTTGA+TGG + chr2_3:18471863-18471882 Msa0282480:intron 30.0%
!! TTCTTCTTTTGAGAGTTTTC+TGG + chr2_3:18471968-18471987 Msa0282480:intron 30.0%
GAAATTGTTGGGGTTTAATT+TGG + chr2_3:18472392-18472411 Msa0282480:intron 30.0%
TTACAGAAGAGAAAATTGCA+TGG - chr2_3:18472419-18472438 None:intergenic 30.0%
TCCACAATTATGCCAATTAA+TGG + chr2_3:18472443-18472462 Msa0282480:intron 30.0%
CCACAATTATGCCAATTAAT+GGG + chr2_3:18472444-18472463 Msa0282480:intron 30.0%
CACAATTATGCCAATTAATG+GGG + chr2_3:18472445-18472464 Msa0282480:intron 30.0%
AGATGAAGATGTTAAACCTA+AGG - chr2_3:18472815-18472834 None:intergenic 30.0%
! TAACTTGTACTCACAAGATA+AGG + chr2_3:18473092-18473111 Msa0282480:intron 30.0%
CAAATACAATGAGACAATAC+TGG - chr2_3:18473368-18473387 None:intergenic 30.0%
CAGTATTGTCTCATTGTATT+TGG + chr2_3:18473366-18473385 Msa0282480:intron 30.0%
TTCACCAAATGTCTTATACT+TGG + chr2_3:18473440-18473459 Msa0282480:intron 30.0%
AGAACCAAGTATAAGACATT+TGG - chr2_3:18473447-18473466 None:intergenic 30.0%
!!! TGGTTCTTACTTTTTGGTTT+TGG + chr2_3:18473460-18473479 Msa0282480:intron 30.0%
AACATGAATTGGGAATCAAT+GGG - chr2_3:18473578-18473597 None:intergenic 30.0%
TTTCCTCTTGAATTTATGGA+AGG + chr2_3:18473680-18473699 Msa0282480:intron 30.0%
AAACCTTCCATAAATTCAAG+AGG - chr2_3:18473686-18473705 None:intergenic 30.0%
AGAAGCAAATGAAAATTGAG+AGG - chr2_3:18473760-18473779 None:intergenic 30.0%
! AGAAAGTATATGATCCATGT+TGG - chr2_3:18473868-18473887 None:intergenic 30.0%
ACATGGATCATATACTTTCT+CGG + chr2_3:18473868-18473887 Msa0282480:intron 30.0%
! TGTTTATAATTTAGGACGGA+GGG - chr2_3:18473919-18473938 None:intergenic 30.0%
! TTGTTTATAATTTAGGACGG+AGG - chr2_3:18473920-18473939 None:intergenic 30.0%
! GTTTTGCTTATAATAGTGAC+CGG - chr2_3:18474278-18474297 None:intergenic 30.0%
! GTTTTGCTTATAATAGTGAC+CGG + chr2_3:18474278-18474297 Msa0282480:intron 30.0%
TACATCCGTCCATAATTATA+GGG + chr2_3:18474527-18474546 Msa0282480:intron 30.0%
AATCTTATATTTAGGGACTG+AGG + chr2_3:18474791-18474810 Msa0282480:intron 30.0%
GGACTGAGGTAATAATATTT+AGG + chr2_3:18474805-18474824 Msa0282480:intron 30.0%
!! AGTAGTCTTATAAAAAGGGA+CGG + chr2_3:18474846-18474865 Msa0282480:intron 30.0%
AAAATCGATCGGTAAAAAGT+CGG - chr2_3:18475057-18475076 None:intergenic 30.0%
!! TTTTACCGATCGATTTTGAT+TGG + chr2_3:18475060-18475079 Msa0282480:intron 30.0%
GAAAACCAATCAAAATCGAT+CGG - chr2_3:18475068-18475087 None:intergenic 30.0%
TGTGTGTAGTTTCTCTTATT+CGG + chr2_3:18475105-18475124 Msa0282480:intron 30.0%
! CTATTATTTTCTTCATGTGG+GGG - chr2_3:18475511-18475530 None:intergenic 30.0%
ATTGGTAAGTCAAATAAGGA+AGG - chr2_3:18475788-18475807 None:intergenic 30.0%
CATATATATCATGATGCTGT+AGG + chr2_3:18475825-18475844 Msa0282480:intron 30.0%
TTACAACAACGTAATTCGAT+TGG + chr2_3:18475861-18475880 Msa0282480:CDS 30.0%
TTCAAATCGGTAGAATTCAT+CGG + chr2_3:18476526-18476545 Msa0282480:intron 30.0%
CAATTTCTTCATTATAGTGC+AGG - chr2_3:18476778-18476797 None:intergenic 30.0%
GGTAGTTGTATTGTAATAGT+TGG - chr2_3:18476834-18476853 None:intergenic 30.0%
AACCTAATAAAGCAAATGAG+CGG - chr2_3:18477288-18477307 None:intergenic 30.0%
!!! GTGCAATGCATTTTTTTAGA+TGG - chr2_3:18477335-18477354 None:intergenic 30.0%
AAAAAAAAATGCAAGCGGAT+AGG - chr2_3:18477370-18477389 None:intergenic 30.0%
GAATTATTATCACTGGACTT+TGG - chr2_3:18477490-18477509 None:intergenic 30.0%
GTGAAACGAATTATTATCAC+TGG - chr2_3:18477497-18477516 None:intergenic 30.0%
TGATATGATATGAGTATGAC+AGG + chr2_3:18478048-18478067 Msa0282480:intron 30.0%
!! TTTTATTTCGTCGACGTTTT+TGG - chr2_3:18478968-18478987 None:intergenic 30.0%
TTTCATGATGTAGATCATGT+TGG + chr2_3:18479464-18479483 Msa0282480:intron 30.0%
CAAACATCAACATACTCTTA+GGG - chr2_3:18479736-18479755 None:intergenic 30.0%
ACAAACATCAACATACTCTT+AGG - chr2_3:18479737-18479756 None:intergenic 30.0%
!! ATCTACTTATTTTCTCCTTG+GGG + chr2_3:18480271-18480290 Msa0282480:intron 30.0%
TAAAAAGTGAACAATCTTCG+TGG + chr2_3:18480294-18480313 Msa0282480:intron 30.0%
AAAAAGTGAACAATCTTCGT+GGG + chr2_3:18480295-18480314 Msa0282480:intron 30.0%
AAAATACATCATCAACCCTT+TGG + chr2_3:18480345-18480364 Msa0282480:intron 30.0%
AAATACATCATCAACCCTTT+GGG + chr2_3:18480346-18480365 Msa0282480:intron 30.0%
CAGATTTAAATTTAGCCCAA+AGG - chr2_3:18480364-18480383 None:intergenic 30.0%
! ACAGGTTTAAAATTATCCCA+AGG + chr2_3:18480444-18480463 Msa0282480:intron 30.0%
! CAGGTTTAAAATTATCCCAA+GGG + chr2_3:18480445-18480464 Msa0282480:intron 30.0%
! AAAAGTGATCAATTTTCGTC+GGG - chr2_3:18480508-18480527 None:intergenic 30.0%
GAAAGAAAGAAGAGAAATAG+AGG + chr2_3:18480560-18480579 Msa0282480:intron 30.0%
GGGTATTTATAGGTAGAAAT+GGG + chr2_3:18480640-18480659 Msa0282480:intron 30.0%
ATTTATGGTAGTTACAACCT+AGG - chr2_3:18480668-18480687 None:intergenic 30.0%
GAGCAAAATTCTTATGCTTA+TGG + chr2_3:18480948-18480967 Msa0282480:intron 30.0%
TATTTGTCTACGACACATTT+GGG + chr2_3:18480975-18480994 Msa0282480:intron 30.0%
GCAACAAAGATTAACATTAG+TGG - chr2_3:18481038-18481057 None:intergenic 30.0%
GATGCTTGAATTCTATTAAG+GGG - chr2_3:18481233-18481252 None:intergenic 30.0%
GAGATGCTTGAATTCTATTA+AGG - chr2_3:18481235-18481254 None:intergenic 30.0%
GAAACGTGAAAAAAAGCAAA+AGG + chr2_3:18481646-18481665 Msa0282480:intron 30.0%
CTAGAGAATGTTCATAACAT+TGG - chr2_3:18481744-18481763 None:intergenic 30.0%
!! TAGTGAAGAGTGTTAGAAAT+AGG - chr2_3:18481833-18481852 None:intergenic 30.0%
TGAATTTCACACACAATAAG+AGG + chr2_3:18481922-18481941 Msa0282480:intron 30.0%
ACACCAACATTATACATGTT+AGG - chr2_3:18482223-18482242 None:intergenic 30.0%
! GTTGACATATTTTGTCCATT+TGG - chr2_3:18482253-18482272 None:intergenic 30.0%
TTGTCTATACTTGGTTAAAG+AGG + chr2_3:18482287-18482306 Msa0282480:intron 30.0%
TGTCTATACTTGGTTAAAGA+GGG + chr2_3:18482288-18482307 Msa0282480:intron 30.0%
AATAAATACATAAGTGCAGG+TGG + chr2_3:18482364-18482383 Msa0282480:intron 30.0%
TGGAGTAATTAGAAGAACTT+GGG - chr2_3:18482526-18482545 None:intergenic 30.0%
ATGGAGTAATTAGAAGAACT+TGG - chr2_3:18482527-18482546 None:intergenic 30.0%
! AATAATGGTTTAGGATAGTG+GGG - chr2_3:18482666-18482685 None:intergenic 30.0%
! GTAATAATGGTTTAGGATAG+TGG - chr2_3:18482668-18482687 None:intergenic 30.0%
TGATGAATATGAAACCTGCA+TGG + chr2_3:18471382-18471401 Msa0282480:CDS 35.0%
! GAAACATTCTTTGGTGATTG+TGG + chr2_3:18471423-18471442 Msa0282480:CDS 35.0%
! AACATTCTTTGGTGATTGTG+GGG + chr2_3:18471425-18471444 Msa0282480:CDS 35.0%
CTTGGAACTTTGTCATCTTT+AGG + chr2_3:18471844-18471863 Msa0282480:intron 35.0%
GATGGATATCTGGAAATTCT+TGG + chr2_3:18471881-18471900 Msa0282480:intron 35.0%
TAGTAATTAGGTAGCTAGGT+AGG - chr2_3:18471920-18471939 None:intergenic 35.0%
! GAGAGTTTTCTGGATCTATT+TGG + chr2_3:18471978-18471997 Msa0282480:intron 35.0%
! TTCTCTCTGACATGCAATTT+TGG + chr2_3:18472057-18472076 Msa0282480:intron 35.0%
!! CAATTTTGGAGGATTTACCT+TGG + chr2_3:18472071-18472090 Msa0282480:intron 35.0%
CACTGAAATTATGTCTCTCA+TGG + chr2_3:18472258-18472277 Msa0282480:intron 35.0%
ATTTCACTCATGAGGAAATG+AGG + chr2_3:18472348-18472367 Msa0282480:intron 35.0%
CCCATTAATTGGCATAATTG+TGG - chr2_3:18472447-18472466 None:intergenic 35.0%
! TTTTGCTAACTTATGCCCTA+AGG - chr2_3:18473236-18473255 None:intergenic 35.0%
TAAACAAATTGTGCGTTTGG+AGG - chr2_3:18473301-18473320 None:intergenic 35.0%
CAACATGAATTGGGAATCAA+TGG - chr2_3:18473579-18473598 None:intergenic 35.0%
TTGATTCCCAATTCATGTTG+AGG + chr2_3:18473579-18473598 Msa0282480:intron 35.0%
! ACAAATGCTTTAAGCCAACA+TGG + chr2_3:18473851-18473870 Msa0282480:intron 35.0%
TTACTTATAATATGGGACGG+AGG + chr2_3:18474356-18474375 Msa0282480:intron 35.0%
TACTTATAATATGGGACGGA+GGG + chr2_3:18474357-18474376 Msa0282480:intron 35.0%
CTACATCCGTCCATAATTAT+AGG + chr2_3:18474526-18474545 Msa0282480:intron 35.0%
!! CGGTAATAGTTTGCTATCTA+TGG + chr2_3:18474959-18474978 Msa0282480:intron 35.0%
GCACATTAGTGTACAAAAGT+TGG + chr2_3:18475986-18476005 Msa0282480:intron 35.0%
AAACATTAACCAACCCACTT+AGG - chr2_3:18476027-18476046 None:intergenic 35.0%
! GCTTGTATCGGATTCTTTTT+AGG + chr2_3:18476105-18476124 Msa0282480:intron 35.0%
! AGGCACATTTTATGCTTGAT+TGG + chr2_3:18476125-18476144 Msa0282480:intron 35.0%
ACTTTGCATGACTTTGATTG+TGG - chr2_3:18476349-18476368 None:intergenic 35.0%
AGAGAGAACAGAAATGGAAT+GGG - chr2_3:18476414-18476433 None:intergenic 35.0%
! GTAATAGTTGGCTCATTGAT+TGG - chr2_3:18476822-18476841 None:intergenic 35.0%
CTTACATCTGCAAAATGGTA+CGG - chr2_3:18476855-18476874 None:intergenic 35.0%
!! TCCATTTTTGTCCTAAGTCT+TGG + chr2_3:18476879-18476898 Msa0282480:intron 35.0%
TCCAAGACTTAGGACAAAAA+TGG - chr2_3:18476883-18476902 None:intergenic 35.0%
AATCCTCAAATCCAAGACTT+AGG - chr2_3:18476893-18476912 None:intergenic 35.0%
!!! TGAGACAATCCTTTTTTCGA+TGG + chr2_3:18476976-18476995 Msa0282480:intron 35.0%
TGAGTTATGCCATCGAAAAA+AGG - chr2_3:18476988-18477007 None:intergenic 35.0%
!! TTTTTCGATGGCATAACTCA+TGG + chr2_3:18476988-18477007 Msa0282480:intron 35.0%
AGGTGTGATTATTGACAGTT+TGG + chr2_3:18477154-18477173 Msa0282480:intron 35.0%
ACCTAATAAAGCAAATGAGC+GGG - chr2_3:18477287-18477306 None:intergenic 35.0%
TAATACATGAAGCCTGTGTT+TGG + chr2_3:18477762-18477781 Msa0282480:intron 35.0%
TGACAGGTACAAATTGTATG+AGG + chr2_3:18478064-18478083 Msa0282480:intron 35.0%
!!! GATTTTTGAAGTAGGAGTAC+CGG + chr2_3:18479176-18479195 Msa0282480:intron 35.0%
AAAGAACGAGATTTGGACTA+GGG - chr2_3:18479447-18479466 None:intergenic 35.0%
CATCATGAAAGAACGAGATT+TGG - chr2_3:18479454-18479473 None:intergenic 35.0%
TTATGGTTCTTGACCTATCA+TGG + chr2_3:18479632-18479651 Msa0282480:intron 35.0%
TATGGTTCTTGACCTATCAT+GGG + chr2_3:18479633-18479652 Msa0282480:intron 35.0%
! TCCAAATGTTTTGTGGTCAT+TGG + chr2_3:18479661-18479680 Msa0282480:intron 35.0%
TCCAATGACCACAAAACATT+TGG - chr2_3:18479665-18479684 None:intergenic 35.0%
!!! ATTGTTCACTTTTTACCCCA+AGG - chr2_3:18480289-18480308 None:intergenic 35.0%
AAAAGTGAACAATCTTCGTG+GGG + chr2_3:18480296-18480315 Msa0282480:intron 35.0%
! ATGATGTATTTTCCCCAAGA+AGG - chr2_3:18480337-18480356 None:intergenic 35.0%
TGGGTAAAAAGAACTTCTTG+TGG - chr2_3:18480397-18480416 None:intergenic 35.0%
! CAAGAAGTTCTTTTTACCCA+CGG + chr2_3:18480397-18480416 Msa0282480:intron 35.0%
GTTTCTGCGGTTAAAAAAAC+AGG + chr2_3:18480426-18480445 Msa0282480:intron 35.0%
! AAATAGTGAGTAGCTGACTT+GGG - chr2_3:18480482-18480501 None:intergenic 35.0%
AAAATAGTGAGTAGCTGACT+TGG - chr2_3:18480483-18480502 None:intergenic 35.0%
! AAAGTGATCAATTTTCGTCG+GGG - chr2_3:18480507-18480526 None:intergenic 35.0%
TAGTATGGTGTGAGGAATTA+GGG + chr2_3:18480607-18480626 Msa0282480:intron 35.0%
!! AAGTATGGAGGGGTATTTAT+AGG + chr2_3:18480630-18480649 Msa0282480:intron 35.0%
! GGGGTATTTATAGGTAGAAA+TGG + chr2_3:18480639-18480658 Msa0282480:intron 35.0%
GGTTGTAACTACCATAAATG+TGG + chr2_3:18480669-18480688 Msa0282480:intron 35.0%
! GTTAAAAACGTGTGGATTGA+AGG + chr2_3:18480712-18480731 Msa0282480:intron 35.0%
! AACTAACGCAAGGGTATATT+TGG + chr2_3:18480888-18480907 Msa0282480:intron 35.0%
GTATTTGTCTACGACACATT+TGG + chr2_3:18480974-18480993 Msa0282480:intron 35.0%
! GACACATTTGGGTTTATTAC+TGG + chr2_3:18480986-18481005 Msa0282480:intron 35.0%
! AAGGAAGTACAAAAAGTTGG+TGG - chr2_3:18481106-18481125 None:intergenic 35.0%
AGAATTCAAGCATCTCACAA+AGG + chr2_3:18481239-18481258 Msa0282480:intron 35.0%
GAAGAGATAGAAACAAACTG+TGG + chr2_3:18481763-18481782 Msa0282480:intron 35.0%
AGATAGAAACAAACTGTGGA+AGG + chr2_3:18481767-18481786 Msa0282480:intron 35.0%
AACACTCTTCACTATCGTAT+TGG + chr2_3:18481839-18481858 Msa0282480:intron 35.0%
ACACTCTTCACTATCGTATT+GGG + chr2_3:18481840-18481859 Msa0282480:intron 35.0%
! TGGGTCTCACTATTTTATGT+GGG + chr2_3:18481872-18481891 Msa0282480:intron 35.0%
TATTGTGTGTGAAATTCACG+TGG - chr2_3:18481920-18481939 None:intergenic 35.0%
! TTACCAGTTGTTGTTCTAAC+AGG - chr2_3:18481966-18481985 None:intergenic 35.0%
TGTTAACGTAGTTTGACCAT+TGG + chr2_3:18482034-18482053 Msa0282480:intron 35.0%
TAATTGCTCTATAGTCGTAG+AGG - chr2_3:18482066-18482085 None:intergenic 35.0%
GTTGGTGTATTTAGTCCAAA+TGG + chr2_3:18482235-18482254 Msa0282480:intron 35.0%
CGATTTGATGAATCTGACTT+AGG + chr2_3:18482431-18482450 Msa0282480:CDS 35.0%
TTAGGAATATCGCAATTCGA+GGG + chr2_3:18482449-18482468 Msa0282480:CDS 35.0%
GATGAAGATAACAACCACAT+TGG + chr2_3:18482500-18482519 Msa0282480:CDS 35.0%
! TCTGTTGGATTTGTTCTTCT+TGG - chr2_3:18482585-18482604 None:intergenic 35.0%
TATGGTGAGAGACATGATGA+TGG + chr2_3:18471296-18471315 Msa0282480:exon 40.0%
ATGGTGAGAGACATGATGAT+GGG + chr2_3:18471297-18471316 Msa0282480:CDS 40.0%
ATCATCATCAAGAGGAGACA+TGG + chr2_3:18471344-18471363 Msa0282480:CDS 40.0%
AGCATGAGAAGATAAGCAGT+GGG - chr2_3:18471517-18471536 None:intergenic 40.0%
AAGCATGAGAAGATAAGCAG+TGG - chr2_3:18471518-18471537 None:intergenic 40.0%
! TCTCTGACATGCAATTTTGG+AGG + chr2_3:18472060-18472079 Msa0282480:intron 40.0%
!! TTTTGGAGGATTTACCTTGG+TGG + chr2_3:18472074-18472093 Msa0282480:intron 40.0%
ATGCCAATTAATGGGGTTAC+AGG + chr2_3:18472452-18472471 Msa0282480:intron 40.0%
TGCCAATTAATGGGGTTACA+GGG + chr2_3:18472453-18472472 Msa0282480:intron 40.0%
AACCCTGTAACCCCATTAAT+TGG - chr2_3:18472458-18472477 None:intergenic 40.0%
CTGACAATGTTGATGTCCTT+AGG + chr2_3:18472796-18472815 Msa0282480:intron 40.0%
! AGACATTTGGTGAACCCTTA+TGG - chr2_3:18473434-18473453 None:intergenic 40.0%
TTATCCATTTCTCCCTGCAA+AGG + chr2_3:18473513-18473532 Msa0282480:intron 40.0%
TAAACCTTTGCAGGGAGAAA+TGG - chr2_3:18473520-18473539 None:intergenic 40.0%
ACAGCTGATAAACCTTTGCA+GGG - chr2_3:18473528-18473547 None:intergenic 40.0%
AACAGCTGATAAACCTTTGC+AGG - chr2_3:18473529-18473548 None:intergenic 40.0%
ATAGGGCCTCAACATGAATT+GGG - chr2_3:18473588-18473607 None:intergenic 40.0%
TATAGGGCCTCAACATGAAT+TGG - chr2_3:18473589-18473608 None:intergenic 40.0%
ACACAAAAAACTACACCCTC+CGG + chr2_3:18474147-18474166 Msa0282480:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr2_3:18474282-18474301 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr2_3:18474281-18474300 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr2_3:18474281-18474300 Msa0282480:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr2_3:18474282-18474301 Msa0282480:intron 40.0%
AGTTTGTAACATACACCCTC+CGG - chr2_3:18474300-18474319 None:intergenic 40.0%
AAGGGCCCTATAATTATGGA+CGG - chr2_3:18474535-18474554 None:intergenic 40.0%
CCTAAAGGGCCCTATAATTA+TGG - chr2_3:18474539-18474558 None:intergenic 40.0%
CCATAATTATAGGGCCCTTT+AGG + chr2_3:18474536-18474555 Msa0282480:intron 40.0%
! TAGGGCCCTTTAGGAAAAAT+AGG + chr2_3:18474545-18474564 Msa0282480:intron 40.0%
! AGTCTTATAAAAAGGGACGG+AGG + chr2_3:18474849-18474868 Msa0282480:intron 40.0%
CGTAATTCGATTGGATGATC+TGG + chr2_3:18475870-18475889 Msa0282480:CDS 40.0%
GAGAGAGAACAGAAATGGAA+TGG - chr2_3:18476415-18476434 None:intergenic 40.0%
TGCATGAGAGAGAACAGAAA+TGG - chr2_3:18476420-18476439 None:intergenic 40.0%
TTTCTGTTCTCTCTCATGCA+AGG + chr2_3:18476420-18476439 Msa0282480:CDS 40.0%
! CATTGATTGGTACTTCTGTC+CGG - chr2_3:18476809-18476828 None:intergenic 40.0%
TGTCCTAAGTCTTGGATTTG+AGG + chr2_3:18476887-18476906 Msa0282480:intron 40.0%
! TCCCGCTCATTTGCTTTATT+AGG + chr2_3:18477283-18477302 Msa0282480:intron 40.0%
CAAGCGGATAGGAATGAAAT+TGG - chr2_3:18477359-18477378 None:intergenic 40.0%
!!! CTAGCATGTTTGTTTTAGCG+TGG - chr2_3:18477897-18477916 None:intergenic 40.0%
CGAAAACCTCACAAATCACA+AGG + chr2_3:18477944-18477963 Msa0282480:intron 40.0%
AAACCTCACAAATCACAAGG+AGG + chr2_3:18477947-18477966 Msa0282480:intron 40.0%
CACGAGGTAAAGAAATGATG+AGG + chr2_3:18477985-18478004 Msa0282480:intron 40.0%
GAGGTAAAGAAATGATGAGG+AGG + chr2_3:18477988-18478007 Msa0282480:intron 40.0%
AAAGAAATGATGAGGAGGAC+TGG + chr2_3:18477993-18478012 Msa0282480:intron 40.0%
! TACCGGTACACCTTAATTTG+CGG + chr2_3:18479193-18479212 Msa0282480:intron 40.0%
GAAAGAACGAGATTTGGACT+AGG - chr2_3:18479448-18479467 None:intergenic 40.0%
CATGATGTAGATCATGTTGG+CGG + chr2_3:18479467-18479486 Msa0282480:intron 40.0%
! ATTTGGAACTTGCCCATGAT+AGG - chr2_3:18479648-18479667 None:intergenic 40.0%
! GGCAAGTTCCAAATGTTTTG+TGG + chr2_3:18479654-18479673 Msa0282480:intron 40.0%
! TGTTTTGTGGTCATTGGATC+CGG + chr2_3:18479667-18479686 Msa0282480:intron 40.0%
CAGAACGAGCAAAATGAAAC+CGG - chr2_3:18479689-18479708 None:intergenic 40.0%
!! TCATTTTGCTCGTTCTGGTT+TGG + chr2_3:18479692-18479711 Msa0282480:intron 40.0%
TTACACTTGCGCAAGTTAAC+TGG - chr2_3:18479839-18479858 None:intergenic 40.0%
AAAATAGTGAGCAGCCTTCT+TGG + chr2_3:18480320-18480339 Msa0282480:intron 40.0%
AAATAGTGAGCAGCCTTCTT+GGG + chr2_3:18480321-18480340 Msa0282480:intron 40.0%
!! AATAGTGAGTAGCTGACTTG+GGG - chr2_3:18480481-18480500 None:intergenic 40.0%
GTAGTATGGTGTGAGGAATT+AGG + chr2_3:18480606-18480625 Msa0282480:intron 40.0%
TGTGAGGAATTAGGGAAGTA+TGG + chr2_3:18480615-18480634 Msa0282480:intron 40.0%
! AGGAATTAGGGAAGTATGGA+GGG + chr2_3:18480619-18480638 Msa0282480:intron 40.0%
! AGAACACACGTTTTTGTGGA+CGG - chr2_3:18480753-18480772 None:intergenic 40.0%
! CTCAAGAACACACGTTTTTG+TGG - chr2_3:18480757-18480776 None:intergenic 40.0%
CACAAAAACGTGTGTTCTTG+AGG + chr2_3:18480755-18480774 Msa0282480:intron 40.0%
GTATATTTGGAAGCAGTGCA+GGG + chr2_3:18480901-18480920 Msa0282480:intron 40.0%
TCTTTGTTGCATTAGCCCTT+AGG + chr2_3:18481048-18481067 Msa0282480:intron 40.0%
CTTTGTTGCATTAGCCCTTA+GGG + chr2_3:18481049-18481068 Msa0282480:intron 40.0%
CAACCACAAATCAACCCTAA+GGG - chr2_3:18481066-18481085 None:intergenic 40.0%
ACAACCACAAATCAACCCTA+AGG - chr2_3:18481067-18481086 None:intergenic 40.0%
!! TAGGGTTGATTTGTGGTTGT+TGG + chr2_3:18481067-18481086 Msa0282480:intron 40.0%
!! AGGGTTGATTTGTGGTTGTT+GGG + chr2_3:18481068-18481087 Msa0282480:intron 40.0%
! AGCAAAAGGTGCATGTATAC+CGG + chr2_3:18481660-18481679 Msa0282480:intron 40.0%
TAGAAACAAACTGTGGAAGG+AGG + chr2_3:18481770-18481789 Msa0282480:intron 40.0%
! GTGGGTCTCACTATTTTATG+TGG + chr2_3:18481871-18481890 Msa0282480:intron 40.0%
TGTCCTGTTAGAACAACAAC+TGG + chr2_3:18481960-18481979 Msa0282480:intron 40.0%
! ATAAGTGCAGGTGGATTTCA+TGG + chr2_3:18482373-18482392 Msa0282480:intron 40.0%
GTGGATTTCATGGTATACGA+GGG + chr2_3:18482383-18482402 Msa0282480:CDS 40.0%
CTTAGGAATATCGCAATTCG+AGG + chr2_3:18482448-18482467 Msa0282480:CDS 40.0%
ACTAAGAATGGATGGATCTG+AGG + chr2_3:18482472-18482491 Msa0282480:CDS 40.0%
!! CTTCTTGGTGATTTTGTTGC+TGG - chr2_3:18482570-18482589 None:intergenic 40.0%
TCTCTTGGAAGCAGAAGAAA+AGG + chr2_3:18482626-18482645 Msa0282480:CDS 40.0%
!! AAGAAAAGGTGCTCCTCAAA+GGG + chr2_3:18482640-18482659 Msa0282480:CDS 40.0%
ATCAAGAGGAGACATGGACA+TGG + chr2_3:18471350-18471369 Msa0282480:CDS 45.0%
CGTTCTTCCTTCGATTCTTG+TGG - chr2_3:18471452-18471471 None:intergenic 45.0%
CATGAGAAGATAAGCAGTGG+GGG - chr2_3:18471515-18471534 None:intergenic 45.0%
GCATGAGAAGATAAGCAGTG+GGG - chr2_3:18471516-18471535 None:intergenic 45.0%
! TTACCTTGGTGGCAGTTTCA+AGG + chr2_3:18472085-18472104 Msa0282480:intron 45.0%
! TACCTTGGTGGCAGTTTCAA+GGG + chr2_3:18472086-18472105 Msa0282480:intron 45.0%
TCTCATGGATTCACCCAATC+TGG + chr2_3:18472273-18472292 Msa0282480:intron 45.0%
GAAGGTTTCTACACCACCAT+GGG + chr2_3:18473698-18473717 Msa0282480:intron 45.0%
TCATGATGCTGTAGGTGAGA+AGG + chr2_3:18475833-18475852 Msa0282480:intron 45.0%
TTGCAACCAGTGACCTAAGT+GGG + chr2_3:18476011-18476030 Msa0282480:intron 45.0%
GTCACAAGTGAAGCAAGCAT+TGG - chr2_3:18476377-18476396 None:intergenic 45.0%
ATGCTTGCTTCACTTGTGAC+AGG + chr2_3:18476377-18476396 Msa0282480:CDS 45.0%
CACTTGTGACAGGATTCTTC+AGG + chr2_3:18476387-18476406 Msa0282480:CDS 45.0%
GAAGCCTGTGTTTGGATTCA+CGG + chr2_3:18477770-18477789 Msa0282480:intron 45.0%
! TGGATTTTTCACTTCAGCGG+TGG - chr2_3:18477877-18477896 None:intergenic 45.0%
! GCGTGGATTTTTCACTTCAG+CGG - chr2_3:18477880-18477899 None:intergenic 45.0%
! TGTCCTCCTTGTGATTTGTG+AGG - chr2_3:18477953-18477972 None:intergenic 45.0%
ACAAATCACAAGGAGGACAC+TGG + chr2_3:18477954-18477973 Msa0282480:intron 45.0%
!! ACCGGTACACCTTAATTTGC+GGG + chr2_3:18479194-18479213 Msa0282480:intron 45.0%
ACCCGCAAATTAAGGTGTAC+CGG - chr2_3:18479198-18479217 None:intergenic 45.0%
TACGGTACACCCGCAAATTA+AGG - chr2_3:18479206-18479225 None:intergenic 45.0%
! AACGAGATTTGGACTAGGGA+GGG - chr2_3:18479443-18479462 None:intergenic 45.0%
TGAAGCAAAGAGTGGAGATG+TGG - chr2_3:18479514-18479533 None:intergenic 45.0%
! GTTTGAGGTGAAGCAAAGAG+TGG - chr2_3:18479522-18479541 None:intergenic 45.0%
AGCGGAAACTAGAGACTCAT+CGG - chr2_3:18479582-18479601 None:intergenic 45.0%
! CGGTTTCATTTTGCTCGTTC+TGG + chr2_3:18479687-18479706 Msa0282480:intron 45.0%
AATAGTGAGCAGCCTTCTTG+GGG + chr2_3:18480322-18480341 Msa0282480:intron 45.0%
! CCGCAGAAACTTTTTACCGT+GGG - chr2_3:18480416-18480435 None:intergenic 45.0%
CCCACGGTAAAAAGTTTCTG+CGG + chr2_3:18480413-18480432 Msa0282480:intron 45.0%
! ACCGCAGAAACTTTTTACCG+TGG - chr2_3:18480417-18480436 None:intergenic 45.0%
AATAGAGGGAGAGAGTGAGA+AGG + chr2_3:18480575-18480594 Msa0282480:intron 45.0%
ATAGAGGGAGAGAGTGAGAA+GGG + chr2_3:18480576-18480595 Msa0282480:intron 45.0%
AGAAGGGGGAGAAAGTAGTA+TGG + chr2_3:18480592-18480611 Msa0282480:intron 45.0%
GGAGAAAGTAGTATGGTGTG+AGG + chr2_3:18480599-18480618 Msa0282480:intron 45.0%
! GAGGAATTAGGGAAGTATGG+AGG + chr2_3:18480618-18480637 Msa0282480:intron 45.0%
! GGAATTAGGGAAGTATGGAG+GGG + chr2_3:18480620-18480639 Msa0282480:intron 45.0%
ATAGGTAGAAATGGGAGCCT+AGG + chr2_3:18480648-18480667 Msa0282480:intron 45.0%
TGACTTAAGTCACGCACCAT+TGG - chr2_3:18480823-18480842 None:intergenic 45.0%
TGCGTGACTTAACTAACGCA+AGG + chr2_3:18480878-18480897 Msa0282480:intron 45.0%
GCGTGACTTAACTAACGCAA+GGG + chr2_3:18480879-18480898 Msa0282480:intron 45.0%
GGTATATTTGGAAGCAGTGC+AGG + chr2_3:18480900-18480919 Msa0282480:intron 45.0%
!! TAGCCCTTAGGGTTGATTTG+TGG + chr2_3:18481060-18481079 Msa0282480:intron 45.0%
! TGATTTGTGGTTGTTGGGTC+AGG + chr2_3:18481073-18481092 Msa0282480:intron 45.0%
! GCAAAAGGTGCATGTATACC+GGG + chr2_3:18481661-18481680 Msa0282480:intron 45.0%
ATTAACTACTCTCTCCGTCC+CGG - chr2_3:18481682-18481701 None:intergenic 45.0%
AGGAGGCTGAAGGAGAAAAT+TGG + chr2_3:18481787-18481806 Msa0282480:intron 45.0%
GGAGGCTGAAGGAGAAAATT+GGG + chr2_3:18481788-18481807 Msa0282480:intron 45.0%
GAGGCTGAAGGAGAAAATTG+GGG + chr2_3:18481789-18481808 Msa0282480:intron 45.0%
CTGAAGGAGAAAATTGGGGA+AGG + chr2_3:18481793-18481812 Msa0282480:intron 45.0%
ATCGTATTGGGTAACTCACG+TGG + chr2_3:18481852-18481871 Msa0282480:intron 45.0%
TCGTATTGGGTAACTCACGT+GGG + chr2_3:18481853-18481872 Msa0282480:intron 45.0%
! GGTGGATTTCATGGTATACG+AGG + chr2_3:18482382-18482401 Msa0282480:intron 45.0%
GCAATTCGAGGGACTAAGAA+TGG + chr2_3:18482460-18482479 Msa0282480:CDS 45.0%
TTCGAGGGACTAAGAATGGA+TGG + chr2_3:18482464-18482483 Msa0282480:CDS 45.0%
TAGAAGAACTTGGGCCAATG+TGG - chr2_3:18482517-18482536 None:intergenic 45.0%
!! CTTGGTGATTTTGTTGCTGG+TGG - chr2_3:18482567-18482586 None:intergenic 45.0%
AAATCCAACAGATTCCTCCC+TGG + chr2_3:18482593-18482612 Msa0282480:CDS 45.0%
TTCTTCTGCTTCCAAGAGAG+AGG - chr2_3:18482625-18482644 None:intergenic 45.0%
!! GAAGAAAAGGTGCTCCTCAA+AGG + chr2_3:18482639-18482658 Msa0282480:CDS 45.0%
!!! TTTTTTTTTGTTTATAATTT+AGG - chr2_3:18473927-18473946 None:intergenic 5.0%
!!! TTTTTTTTTTACTTATAATA+TGG + chr2_3:18474348-18474367 Msa0282480:intron 5.0%
!!! TTTTTTTTTACTTATAATAT+GGG + chr2_3:18474349-18474368 Msa0282480:intron 5.0%
!! GAAAAAAATATAAAATAAAT+AGG + chr2_3:18474687-18474706 Msa0282480:intron 5.0%
!! AAAAAATATAAAATAAATAG+GGG + chr2_3:18474689-18474708 Msa0282480:intron 5.0%
!! CAAAATATATTATATATAAT+AGG + chr2_3:18475679-18475698 Msa0282480:intron 5.0%
!! AAATATATTATATATAATAG+GGG + chr2_3:18475681-18475700 Msa0282480:intron 5.0%
!! TTTATAAATAATATAACATA+AGG + chr2_3:18477670-18477689 Msa0282480:intron 5.0%
!!! AATTTTTTAATAATTTGTTT+TGG - chr2_3:18477736-18477755 None:intergenic 5.0%
!!! TTAAAATCTTATTTTTATTT+AGG + chr2_3:18478175-18478194 Msa0282480:intron 5.0%
!! ATTATTTATAAAAACATATT+TGG + chr2_3:18478614-18478633 Msa0282480:intron 5.0%
!! TAACTATTAATTTATTAATT+GGG - chr2_3:18478876-18478895 None:intergenic 5.0%
!! TTAACTATTAATTTATTAAT+TGG - chr2_3:18478877-18478896 None:intergenic 5.0%
!! GATTTAATTATTATAATTAT+AGG - chr2_3:18478938-18478957 None:intergenic 5.0%
!!! TAAATTAACTATTATTTTTA+TGG - chr2_3:18479154-18479173 None:intergenic 5.0%
!! ATAAATACAAATATAAATAA+AGG + chr2_3:18480117-18480136 Msa0282480:intron 5.0%
!! CTATTAAATTATAATAAAAA+TGG + chr2_3:18482696-18482715 Msa0282480:three_prime_UTR 5.0%
TGAAACCTGCATGGCTAGAG+AGG + chr2_3:18471391-18471410 Msa0282480:CDS 50.0%
ATCAACCTCTCTAGCCATGC+AGG - chr2_3:18471399-18471418 None:intergenic 50.0%
TGCATGGCTAGAGAGGTTGA+TGG + chr2_3:18471398-18471417 Msa0282480:CDS 50.0%
TGCTTCTCATCCTCTTCTCC+AGG + chr2_3:18471533-18471552 Msa0282480:CDS 50.0%
AACCCTTGAAACTGCCACCA+AGG - chr2_3:18472091-18472110 None:intergenic 50.0%
GGAAGGTTTCTACACCACCA+TGG + chr2_3:18473697-18473716 Msa0282480:intron 50.0%
GTTTCTACACCACCATGGGT+TGG + chr2_3:18473702-18473721 Msa0282480:intron 50.0%
TAGCCAAACCAACCAACCCA+TGG - chr2_3:18473717-18473736 None:intergenic 50.0%
! CACTTAGGTCACTGGTTGCA+AGG - chr2_3:18476012-18476031 None:intergenic 50.0%
CTTGCAACCAGTGACCTAAG+TGG + chr2_3:18476010-18476029 Msa0282480:intron 50.0%
AACCAGTGACCTAAGTGGGT+TGG + chr2_3:18476015-18476034 Msa0282480:intron 50.0%
AACCAACCCACTTAGGTCAC+TGG - chr2_3:18476020-18476039 None:intergenic 50.0%
CCAACCGTGAATCCAAACAC+AGG - chr2_3:18477777-18477796 None:intergenic 50.0%
CCTGTGTTTGGATTCACGGT+TGG + chr2_3:18477774-18477793 Msa0282480:intron 50.0%
GTGTTTGGATTCACGGTTGG+AGG + chr2_3:18477777-18477796 Msa0282480:intron 50.0%
GACACTGGTCATTTGACACG+AGG + chr2_3:18477969-18477988 Msa0282480:intron 50.0%
! AGATTTGGACTAGGGAGGGA+GGG - chr2_3:18479439-18479458 None:intergenic 50.0%
! GAACGAGATTTGGACTAGGG+AGG - chr2_3:18479444-18479463 None:intergenic 50.0%
TTCACCTCAAACCCCTTCAG+AGG + chr2_3:18479530-18479549 Msa0282480:intron 50.0%
! ACAACCTCTGAAGGGGTTTG+AGG - chr2_3:18479537-18479556 None:intergenic 50.0%
AGTGGTGCACAACCTCTGAA+GGG - chr2_3:18479545-18479564 None:intergenic 50.0%
AAGTGGTGCACAACCTCTGA+AGG - chr2_3:18479546-18479565 None:intergenic 50.0%
TTTGTTCTCTCGCGGTTGAG+TGG + chr2_3:18479605-18479624 Msa0282480:intron 50.0%
! AACTGGCGCATGGGCATTTT+CGG - chr2_3:18479822-18479841 None:intergenic 50.0%
ACTGCGCAAGTTAAGTCACG+TGG + chr2_3:18479862-18479881 Msa0282480:intron 50.0%
AAGTTAAGTCACGTGGCGCA+AGG + chr2_3:18479869-18479888 Msa0282480:intron 50.0%
AGTTAAGTCACGTGGCGCAA+GGG + chr2_3:18479870-18479889 Msa0282480:intron 50.0%
TAGAGGGAGAGAGTGAGAAG+GGG + chr2_3:18480577-18480596 Msa0282480:intron 50.0%
! ACACACGTTTTTGTGGACGG+TGG - chr2_3:18480750-18480769 None:intergenic 50.0%
TGTTCTTGAGGACAGACCAC+CGG + chr2_3:18480767-18480786 Msa0282480:intron 50.0%
TTAACTCGCGCATAGGCCAA+TGG + chr2_3:18480804-18480823 Msa0282480:intron 50.0%
TGCGTGACTTAAGTCACGCA+TGG + chr2_3:18480827-18480846 Msa0282480:intron 50.0%
AAGGTGCATGTATACCGGGA+CGG + chr2_3:18481665-18481684 Msa0282480:intron 50.0%
AAACTGTGGAAGGAGGCTGA+AGG + chr2_3:18481777-18481796 Msa0282480:intron 50.0%
GGAGAAAATTGGGGAAGGAG+AGG + chr2_3:18481798-18481817 Msa0282480:intron 50.0%
! GTCGTAGAGGTATGCACCAA+TGG - chr2_3:18482053-18482072 None:intergenic 50.0%
CTCCATCACTCACCAAGAAG+AGG + chr2_3:18482541-18482560 Msa0282480:CDS 50.0%
AATGCCAGGGAGGAATCTGT+TGG - chr2_3:18482600-18482619 None:intergenic 50.0%
CAAGAGAGAGGACAATGCCA+GGG - chr2_3:18482613-18482632 None:intergenic 50.0%
GTGGGGTCCACAAGAATCGA+AGG + chr2_3:18471442-18471461 Msa0282480:CDS 55.0%
!! CTACACCACCATGGGTTGGT+TGG + chr2_3:18473706-18473725 Msa0282480:intron 55.0%
CCAAACCAACCAACCCATGG+TGG - chr2_3:18473714-18473733 None:intergenic 55.0%
!! CCACCATGGGTTGGTTGGTT+TGG + chr2_3:18473711-18473730 Msa0282480:intron 55.0%
!!! GTTGGAGGCATTTTTGCGCG+AGG + chr2_3:18477792-18477811 Msa0282480:intron 55.0%
AGCAAGCTTCTCCTCCAACG+TGG + chr2_3:18477847-18477866 Msa0282480:intron 55.0%
TCAGCGGTGGAAAACCACGT+TGG - chr2_3:18477864-18477883 None:intergenic 55.0%
! GAGATTTGGACTAGGGAGGG+AGG - chr2_3:18479440-18479459 None:intergenic 55.0%
! GTGGTGCACAACCTCTGAAG+GGG - chr2_3:18479544-18479563 None:intergenic 55.0%
TCGGAGCTGCACAGACAAAG+TGG - chr2_3:18479563-18479582 None:intergenic 55.0%
CCGCGAGAGAACAAAGCTAG+CGG - chr2_3:18479600-18479619 None:intergenic 55.0%
!! CCGCTAGCTTTGTTCTCTCG+CGG + chr2_3:18479597-18479616 Msa0282480:intron 55.0%
! GCATTTTCGGCATCGCTGCA+GGG - chr2_3:18479809-18479828 None:intergenic 55.0%
GCGCAAGTTAACTGGCGCAT+GGG - chr2_3:18479831-18479850 None:intergenic 55.0%
TGCGCAAGTTAACTGGCGCA+TGG - chr2_3:18479832-18479851 None:intergenic 55.0%
TGGGGAAGTGATCGACCCTT+GGG - chr2_3:18480463-18480482 None:intergenic 55.0%
TTGGGGAAGTGATCGACCCT+TGG - chr2_3:18480464-18480483 None:intergenic 55.0%
AGAGGGAGAGAGTGAGAAGG+GGG + chr2_3:18480578-18480597 Msa0282480:intron 55.0%
GTTAACTCACGCACGTTGGC+CGG - chr2_3:18480789-18480808 None:intergenic 55.0%
GCGAGTTAACTCACGCACGT+TGG - chr2_3:18480793-18480812 None:intergenic 55.0%
GCGTGAGTTAACTCGCGCAT+AGG + chr2_3:18480797-18480816 Msa0282480:intron 55.0%
GGCCTCTTCTTGGTGAGTGA+TGG - chr2_3:18482546-18482565 None:intergenic 55.0%
TGTTGCTGGTGGCCTCTTCT+TGG - chr2_3:18482556-18482575 None:intergenic 55.0%
CCAAGAGAGAGGACAATGCC+AGG - chr2_3:18482614-18482633 None:intergenic 55.0%
CCTGGCATTGTCCTCTCTCT+TGG + chr2_3:18482611-18482630 Msa0282480:CDS 55.0%
!! TAGGATAGTGGGGCCCTTTG+AGG - chr2_3:18482656-18482675 None:intergenic 55.0%
GAGAAAACCCGTGCGACGCA+CGG + chr2_3:18477462-18477481 Msa0282480:intron 60.0%
AGAAAACCCGTGCGACGCAC+GGG + chr2_3:18477463-18477482 Msa0282480:intron 60.0%
GCGGTGGAAAACCACGTTGG+AGG - chr2_3:18477861-18477880 None:intergenic 60.0%
ATGTTGGCGGTGAGACGACG+AGG + chr2_3:18479480-18479499 Msa0282480:intron 60.0%
! CGGTGAGACGACGAGGTGTT+GGG + chr2_3:18479487-18479506 Msa0282480:intron 60.0%
GTTCTCTCGCGGTTGAGTGG+TGG + chr2_3:18479608-18479627 Msa0282480:intron 60.0%
CGCGGTTGAGTGGTGGCTTA+TGG + chr2_3:18479615-18479634 Msa0282480:intron 60.0%
CGCGAGCAAAATGTGCTGGG+TGG - chr2_3:18480924-18480943 None:intergenic 60.0%
GGGCGCGAGCAAAATGTGCT+GGG - chr2_3:18480921-18480940 None:intergenic 60.0%
AGGGCGCGAGCAAAATGTGC+TGG - chr2_3:18480920-18480939 None:intergenic 60.0%
! GGCATTTTCGGCATCGCTGC+AGG - chr2_3:18479810-18479829 None:intergenic 60.0%
AGGGCGCGAGCAAAATGTGC+TGG + chr2_3:18480920-18480939 Msa0282480:intron 60.0%
GGGCGCGAGCAAAATGTGCT+GGG + chr2_3:18480921-18480940 Msa0282480:intron 60.0%
CGCGAGCAAAATGTGCTGGG+TGG + chr2_3:18480924-18480943 Msa0282480:intron 60.0%
GAGAGAGGACAATGCCAGGG+AGG - chr2_3:18482610-18482629 None:intergenic 60.0%
TTTGGACCCGTGCGTCGCAC+GGG - chr2_3:18477472-18477491 None:intergenic 65.0%
CTTTGGACCCGTGCGTCGCA+CGG - chr2_3:18477473-18477492 None:intergenic 65.0%
GAGGGAGGGAAGAGGCGGAT+GGG - chr2_3:18479425-18479444 None:intergenic 65.0%
CTAGGGAGGGAGGGAAGAGG+CGG - chr2_3:18479430-18479449 None:intergenic 65.0%
GGACTAGGGAGGGAGGGAAG+AGG - chr2_3:18479433-18479452 None:intergenic 65.0%
GCGGTGAGACGACGAGGTGT+TGG + chr2_3:18479486-18479505 Msa0282480:intron 65.0%
AACTCACGCACGTTGGCCGG+TGG - chr2_3:18480786-18480805 None:intergenic 65.0%
GGAGGGAGGGAAGAGGCGGA+TGG - chr2_3:18479426-18479445 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 18471268 18482812 18471268 ID=Msa0282480;Name=Msa0282480
chr2_3 mRNA 18471268 18482812 18471268 ID=Msa0282480-mRNA-1;Parent=Msa0282480;Name=Msa0282480-mRNA-1;_AED=0.14;_eAED=0.14;_QI=29|1|1|1|0.33|0.75|4|136|255
chr2_3 exon 18471268 18471554 18471268 ID=Msa0282480-mRNA-1:exon:7571;Parent=Msa0282480-mRNA-1
chr2_3 exon 18475847 18475921 18475847 ID=Msa0282480-mRNA-1:exon:7572;Parent=Msa0282480-mRNA-1
chr2_3 exon 18476301 18476441 18476301 ID=Msa0282480-mRNA-1:exon:7573;Parent=Msa0282480-mRNA-1
chr2_3 exon 18482383 18482812 18482383 ID=Msa0282480-mRNA-1:exon:7574;Parent=Msa0282480-mRNA-1
chr2_3 five_prime_UTR 18471268 18471296 18471268 ID=Msa0282480-mRNA-1:five_prime_utr;Parent=Msa0282480-mRNA-1
chr2_3 CDS 18471297 18471554 18471297 ID=Msa0282480-mRNA-1:cds;Parent=Msa0282480-mRNA-1
chr2_3 CDS 18475847 18475921 18475847 ID=Msa0282480-mRNA-1:cds;Parent=Msa0282480-mRNA-1
chr2_3 CDS 18476301 18476441 18476301 ID=Msa0282480-mRNA-1:cds;Parent=Msa0282480-mRNA-1
chr2_3 CDS 18482383 18482676 18482383 ID=Msa0282480-mRNA-1:cds;Parent=Msa0282480-mRNA-1
chr2_3 three_prime_UTR 18482677 18482812 18482677 ID=Msa0282480-mRNA-1:three_prime_utr;Parent=Msa0282480-mRNA-1
Gene Sequence

>Msa0282480

ATGGTGAGAGACATGATGATGGGAACTAGTACATATAACTCAATTTCATCATCATCAAGAGGAGACATGGACATGGACATGAGTATGATGAATATGAAACCTGCATGGCTAGAGAGGTTGATGGATGAAACATTCTTTGGTGATTGTGGGGTCCACAAGAATCGAAGGAAGAACGAGAAGAACATTTTTTGCTTACACTGTTGTCTTAGCATCTGCCCCCACTGCTTATCTTCTCATGCTTCTCATCCTCTTCTCCAGGTGAGAAGGTATGTTTACAACAACGTAATTCGATTGGATGATCTGGAAAAGCTCATTGATTGTTCTAATATACAGCCCTATACTATTAACAGTGCAAAAGTGATATTTTTAAATCAGAGGCCACAATCAAAGTCATGCAAAGTTACAACCAATGCTTGCTTCACTTGTGACAGGATTCTTCAGGACCCATTCCATTTCTGTTCTCTCTCATGCAAGGTGGATTTCATGGTATACGAGGGTCAAAGTTTGTCCAACATTTTACATCGATTTGATGAATCTGACTTAGGAATATCGCAATTCGAGGGACTAAGAATGGATGGATCTGAGGTAATTGATGAAGATAACAACCACATTGGCCCAAGTTCTTCTAATTACTCCATCACTCACCAAGAAGAGGCCACCAGCAACAAAATCACCAAGAAGAACAAATCCAACAGATTCCTCCCTGGCATTGTCCTCTCTCTTGGAAGCAGAAGAAAAGGTGCTCCTCAAAGGGCCCCACTATCCTAA

Protein sequence

>Msa0282480

MVRDMMMGTSTYNSISSSSRGDMDMDMSMMNMKPAWLERLMDETFFGDCGVHKNRRKNEKNIFCLHCCLSICPHCLSSHASHPLLQVRRYVYNNVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSKSCKVTTNACFTCDRILQDPFHFCSLSCKVDFMVYEGQSLSNILHRFDESDLGISQFEGLRMDGSEVIDEDNNHIGPSSSNYSITHQEEATSNKITKKNKSNRFLPGIVLSLGSRRKGAPQRAPLS*