AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0284400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0284400 MtrunA17_Chr2g0300361 93.313 658 13 1 1 658 1 627 0.0 1259
Msa0284400 MtrunA17_Chr3g0096381 72.163 467 115 3 203 657 121 584 0.0 701
Msa0284400 MtrunA17_Chr3g0096381 61.983 121 46 0 1 121 1 121 4.63e-39 152
Msa0284400 MtrunA17_Chr5g0409381 51.114 718 286 15 1 658 1 713 0.0 659
Msa0284400 MtrunA17_Chr4g0061491 36.207 464 274 7 206 655 159 614 1.59e-93 301
Msa0284400 MtrunA17_Chr5g0409361 35.252 139 83 1 1 139 1 132 1.11e-19 90.9
Msa0284400 MtrunA17_Chr5g0409361 37.500 112 69 1 1 111 146 257 6.08e-15 76.6
Msa0284400 MtrunA17_Chr5g0409371 38.947 95 58 0 1 95 1 95 7.54e-15 70.5
Msa0284400 MtrunA17_Chr6g0469931 28.708 209 135 8 254 452 42 246 2.01e-14 76.6
Msa0284400 MtrunA17_Chr4g0061501 30.822 146 76 5 383 505 18 161 4.63e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0284400 AT2G06510.1 67.023 655 200 4 1 654 1 640 0.0 903
Msa0284400 AT2G06510.2 66.772 632 194 4 24 654 1 617 0.0 874
Msa0284400 AT4G19130.2 49.853 682 305 8 1 656 2 672 0.0 682
Msa0284400 AT4G19130.1 49.853 682 305 8 1 656 1 671 0.0 682
Msa0284400 AT5G45400.1 61.684 475 177 4 184 656 270 741 0.0 643
Msa0284400 AT5G45400.1 33.758 157 97 2 1 150 1 157 5.57e-19 92.0
Msa0284400 AT5G08020.1 32.584 623 346 14 42 654 41 599 2.59e-102 324
Msa0284400 AT5G61000.1 31.065 676 389 17 1 653 1 622 6.53e-96 308
Msa0284400 AT1G52950.1 22.045 440 294 14 215 629 10 425 7.45e-16 81.6

Find 191 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTATTATTAATATTTC+TGG 0.129088 2_3:-22335155 None:intergenic
ACCAGCCTTTACTGCTAAAA+TGG 0.144775 2_3:-22335986 None:intergenic
CAGAAATATTAATAATAATT+TGG 0.171665 2_3:+22335156 Msa0284400:CDS
TGCAGTAACCCTTGCCTTGA+TGG 0.192465 2_3:-22335431 None:intergenic
GGAAGCAGGGGAGGAGATTA+TGG 0.234809 2_3:+22336473 Msa0284400:CDS
GATTTCACAATCAGGTATTA+TGG 0.235355 2_3:-22335053 None:intergenic
ATGCTATCCTTGATGTTATT+GGG 0.237693 2_3:+22335785 Msa0284400:CDS
GTAGTAATGGGCAGAATTTC+AGG 0.238903 2_3:+22335194 Msa0284400:CDS
GTAGTAATGGGCAGAATTTC+AGG 0.238903 2_3:+22335284 Msa0284400:CDS
AATGCTATCCTTGATGTTAT+TGG 0.260217 2_3:+22335784 Msa0284400:CDS
AGCTGCTTTAAATCCCTATC+AGG 0.291739 2_3:+22335399 Msa0284400:CDS
TTCCTTGTACAGGATTATTA+TGG 0.291986 2_3:+22335015 Msa0284400:intron
TGCTTCTCTATCCATTTCTA+AGG 0.293301 2_3:+22336131 Msa0284400:CDS
TTGAATCTAAAGGACAATTC+TGG 0.293961 2_3:+22335877 Msa0284400:CDS
AACTTGGGTAACTGCTTTCC+AGG 0.306558 2_3:+22336452 Msa0284400:CDS
TAATCTCCTCCCCTGCTTCC+TGG 0.309445 2_3:-22336470 None:intergenic
GAGTGTTGAGCTAACACTTT+GGG 0.310178 2_3:+22335903 Msa0284400:CDS
GTCTGAGCCTCAGGGAAATC+TGG 0.314113 2_3:-22336072 None:intergenic
GTGTGTGGAGAAAGAAATTT+TGG 0.321651 2_3:-22332573 None:intergenic
GTTCTTAAGGTCTGAGCCTC+AGG 0.330109 2_3:-22336081 None:intergenic
TTGATCAAACCAGGTTCTTA+AGG 0.331128 2_3:-22336094 None:intergenic
GATGGCCCACCTACCCTGAT+AGG 0.333085 2_3:-22335413 None:intergenic
GCCCTCATTGTTATCCAGTC+TGG 0.338147 2_3:-22336237 None:intergenic
CAGGAGGATGATGAGAAGTT+TGG 0.346761 2_3:+22336534 Msa0284400:CDS
CAATCACTGCCTACGGAACT+TGG 0.351957 2_3:-22336712 None:intergenic
CTCAACGACCGAGTCAATAC+TGG 0.354429 2_3:+22332799 Msa0284400:CDS
TCAGGCAATGCTTTCTGAAC+TGG 0.362621 2_3:-22335112 None:intergenic
GGTATAGAACCATCCTCATC+TGG 0.367686 2_3:-22335709 None:intergenic
CTCAAAATGCTGGTAGTAAT+GGG 0.368189 2_3:+22335182 Msa0284400:CDS
TCAATCATTTGAAGAATGAA+TGG 0.372621 2_3:+22335647 Msa0284400:CDS
TGCCCATTACTACCAGCATT+TGG 0.378317 2_3:-22335274 None:intergenic
GCTCAAATCCAGGATCATTC+AGG 0.380015 2_3:+22336426 Msa0284400:CDS
TCTCACCGCAAACGCTATTC+CGG 0.381154 2_3:+22332627 Msa0284400:CDS
ACAGCTTGCCCTCTGATGAT+TGG 0.387057 2_3:+22336297 Msa0284400:CDS
GAACCAGCCACAGTGTTATC+AGG 0.387320 2_3:-22335130 None:intergenic
CAAATTAAAGATGAAGATCT+AGG 0.387556 2_3:+22336201 Msa0284400:CDS
GGGCAAGCTGTGTAACAAAA+TGG 0.387851 2_3:-22336285 None:intergenic
TTTGGGGTGAATTCTGCAAC+AGG 0.396738 2_3:+22335920 Msa0284400:CDS
GATGAAGATCTAGGGCGTTC+AGG 0.398577 2_3:+22336210 Msa0284400:CDS
GGTGAAGATTACAGTAGTTA+AGG 0.400983 2_3:+22336638 Msa0284400:CDS
ATGAGTGATGTCCTTAGAAA+TGG 0.402311 2_3:-22336142 None:intergenic
CTCCAAATGCTGGTAGTAAT+GGG 0.405201 2_3:+22335272 Msa0284400:CDS
CCAGCCTTTACTGCTAAAAT+GGG 0.406397 2_3:-22335985 None:intergenic
GAACCTGGTTTGATCAAGTT+GGG 0.410401 2_3:+22336100 Msa0284400:CDS
AGCGGAGGAGGTTGGTATTG+AGG 0.411724 2_3:-22335229 None:intergenic
ACCGCAACAACCACCACCAA+TGG 0.413608 2_3:+22332597 Msa0284400:exon
TCTGAATCCACAAATGACTT+TGG 0.414308 2_3:-22335085 None:intergenic
ATACCTGATTGTGAAATCAT+TGG 0.415649 2_3:+22335058 Msa0284400:CDS
CTTCAAGAGATGGTGGATGC+TGG 0.419540 2_3:+22335955 Msa0284400:CDS
AGAACCTGGTTTGATCAAGT+TGG 0.422430 2_3:+22336099 Msa0284400:CDS
CAATCATTTGAAGAATGAAT+GGG 0.424161 2_3:+22335648 Msa0284400:CDS
TTCCCAATGATTTCACAATC+AGG 0.429166 2_3:-22335061 None:intergenic
TGGGAATCCAAAGTCATTTG+TGG 0.432048 2_3:+22335078 Msa0284400:CDS
GGCGTTCAGGCAAGCCAGAC+TGG 0.443599 2_3:+22336223 Msa0284400:CDS
TCTTCAATGAGTTTGTGTTT+AGG 0.444396 2_3:+22336577 Msa0284400:CDS
CGAAGTCAGGAGACACAAAA+TGG 0.444863 2_3:+22336346 Msa0284400:CDS
AGGATCATTCAGGATTAACT+TGG 0.448406 2_3:+22336436 Msa0284400:CDS
GAAGCAGGGGAGGAGATTAT+GGG 0.448431 2_3:+22336474 Msa0284400:CDS
ATTCCGATGGAGGTGAAATA+CGG 0.449887 2_3:+22335521 Msa0284400:CDS
TTCAAGAGATGGTGGATGCT+GGG 0.453587 2_3:+22335956 Msa0284400:CDS
TTTGATCTCCTTGATTCCGA+TGG 0.453893 2_3:+22335508 Msa0284400:CDS
GCTCCAAATGCTGGTAGTAA+TGG 0.459212 2_3:+22335271 Msa0284400:CDS
GAATTCAGTGGAAAGTCTAT+AGG 0.459727 2_3:+22336018 Msa0284400:CDS
TTTAGCAGTAAAGGCTGGTA+AGG 0.460163 2_3:+22335990 Msa0284400:CDS
TACCTGATTGTGAAATCATT+GGG 0.460436 2_3:+22335059 Msa0284400:CDS
TGATTGAAATTCTTCTGTGC+AGG 0.460517 2_3:-22335631 None:intergenic
AATAAGAAAGTGACGAAGTC+AGG 0.461922 2_3:+22336333 Msa0284400:CDS
GTAACTGCTTTCCAGGAAGC+AGG 0.462729 2_3:+22336459 Msa0284400:CDS
TAAAGCGGAGGAGGTTGGTA+TGG 0.464313 2_3:-22335322 None:intergenic
TACAGTAGTTAAGGCAGATA+AGG 0.467853 2_3:+22336647 Msa0284400:CDS
GCGGTGAGATTCACCGCCAT+TGG 0.468725 2_3:-22332613 None:intergenic
GAATGAATGGGAAATTATGC+TGG 0.470378 2_3:+22335660 Msa0284400:CDS
GAAGAAGACGGTAACGTTGT+TGG 0.471806 2_3:-22332732 None:intergenic
CCGTTTCTATGAAGCAATTG+AGG 0.474581 2_3:+22335570 Msa0284400:CDS
AAGGCAAGGGTTACTGCAAA+AGG 0.476738 2_3:+22335436 Msa0284400:CDS
GTTCCCATCGTAAGGAAGAA+TGG 0.477384 2_3:+22335832 Msa0284400:CDS
GCTCAAAATGCTGGTAGTAA+TGG 0.484784 2_3:+22335181 Msa0284400:CDS
TTCGTCACTTTCTTATTGCA+CGG 0.485857 2_3:-22336327 None:intergenic
TGTTGTAAAGCGGAGGAGGT+TGG 0.489573 2_3:-22335237 None:intergenic
AATGATCCTGGATTTGAGCT+TGG 0.492318 2_3:-22336422 None:intergenic
AAGTTAATCCTGAATGATCC+TGG 0.493959 2_3:-22336434 None:intergenic
TAGGGATTTAAAGCAGCTAT+AGG 0.496621 2_3:-22335394 None:intergenic
TTTCACCTCCATCGGAATCA+AGG 0.500395 2_3:-22335516 None:intergenic
TATGCTGGATTTAAATTCAA+CGG 0.500855 2_3:+22335675 Msa0284400:CDS
TACCCGTATTTCACCTCCAT+CGG 0.501159 2_3:-22335524 None:intergenic
GCTATAGGTATTACACGTGC+TGG 0.503122 2_3:-22335379 None:intergenic
GCTATTCCGGCGATAATCGC+CGG 0.503326 2_3:+22332640 Msa0284400:CDS
TAGATGCAACCAGGAGTTTG+AGG 0.505007 2_3:+22336377 Msa0284400:CDS
AATTTGGCTGCTCCAAATGC+TGG 0.507899 2_3:+22335262 Msa0284400:CDS
TGCTATCCTTGATGTTATTG+GGG 0.509422 2_3:+22335786 Msa0284400:CDS
AGCGGAGGAGGTTGGTATGG+AGG 0.511425 2_3:-22335319 None:intergenic
GATTATTATGGTGCTTAACA+TGG 0.514700 2_3:+22335027 Msa0284400:CDS
ATCCTTCAGTTCCCATCGTA+AGG 0.516057 2_3:+22335824 Msa0284400:CDS
ACGTCGCCGGCGATTATCGC+CGG 0.516823 2_3:-22332646 None:intergenic
TTCTATGAAGCAATTGAGGT+TGG 0.517168 2_3:+22335574 Msa0284400:CDS
ATTCCATTCTTCCTTACGAT+GGG 0.519102 2_3:-22335835 None:intergenic
ACAGTCTCAATGTCACTGAT+AGG 0.519707 2_3:-22335754 None:intergenic
GATCTCCTTGATTCCGATGG+AGG 0.519739 2_3:+22335511 Msa0284400:CDS
CGGTTTGGCGTCGACGTCGC+CGG 0.521923 2_3:-22332659 None:intergenic
AGATTCACCGCCATTGGTGG+TGG 0.522851 2_3:-22332607 None:intergenic
TATAACAATGCTCGTGGAGA+TGG 0.523700 2_3:+22335472 Msa0284400:CDS
CGACCTTTGTAAAGCGGAGG+AGG 0.525294 2_3:-22335331 None:intergenic
TCAGGGTAGGTGGGCCATCA+AGG 0.528250 2_3:+22335417 Msa0284400:CDS
CTGAAGGAGAATTGTTGTCT+AGG 0.528586 2_3:-22335730 None:intergenic
GTGGTTGTTGCGGTTGTGTG+TGG 0.529612 2_3:-22332588 None:intergenic
AATTTGGCTGCTCAAAATGC+TGG 0.530811 2_3:+22335172 Msa0284400:CDS
CATTCCATTCTTCCTTACGA+TGG 0.533999 2_3:-22335836 None:intergenic
GAGCTTTGCCCAGATGAGGA+TGG 0.534821 2_3:+22335700 Msa0284400:CDS
CCTGGATTTGAGCTTGGAGA+AGG 0.534963 2_3:-22336416 None:intergenic
AATCACATTCCTCAAACTCC+TGG 0.536282 2_3:-22336386 None:intergenic
ATTTCTAAGGACATCACTCA+TGG 0.537700 2_3:+22336144 Msa0284400:CDS
TATCGCCGGAATAGCGTTTG+CGG 0.537944 2_3:-22332632 None:intergenic
GAGAACTTGAAGTAACGGTT+TGG 0.539039 2_3:-22332674 None:intergenic
GTATGTGTTGAAGTATGAAC+AGG 0.543799 2_3:+22336515 Msa0284400:CDS
ATGGCCCACCTACCCTGATA+GGG 0.544473 2_3:-22335412 None:intergenic
AAAGTTTACTTGATATCGAA+AGG 0.544592 2_3:+22335598 Msa0284400:CDS
TAAATCCCTATCAGGGTAGG+TGG 0.547460 2_3:+22335407 Msa0284400:CDS
GTAGGTGGGCCATCAAGGCA+AGG 0.549490 2_3:+22335422 Msa0284400:CDS
TTCCTTACGATGGGAACTGA+AGG 0.549709 2_3:-22335826 None:intergenic
GCCATTGGTGGTGGTTGTTG+CGG 0.550602 2_3:-22332598 None:intergenic
TGGTATTGAGGTTGAACTGT+TGG 0.550725 2_3:-22335217 None:intergenic
TTTCCCAACTTGATCAAACC+AGG 0.553038 2_3:-22336103 None:intergenic
AGGCTCAGACCTTAAGAACC+TGG 0.553217 2_3:+22336085 Msa0284400:CDS
CTTTGTAAAGCGGAGGAGGT+TGG 0.553943 2_3:-22335327 None:intergenic
AGAGTGTTGAGCTAACACTT+TGG 0.559856 2_3:+22335902 Msa0284400:CDS
TGGAATGGAAACACTGAGAA+GGG 0.560059 2_3:+22335852 Msa0284400:CDS
CGCCGCTATAACAATGCTCG+TGG 0.561907 2_3:+22335466 Msa0284400:CDS
CCTTCTCCAAGCTCAAATCC+AGG 0.562294 2_3:+22336416 Msa0284400:CDS
GTGAGATTCACCGCCATTGG+TGG 0.562315 2_3:-22332610 None:intergenic
CCTCAATTGCTTCATAGAAA+CGG 0.565250 2_3:-22335570 None:intergenic
CATCGTAAGGAAGAATGGAA+TGG 0.565891 2_3:+22335837 Msa0284400:CDS
ATGGAATGGAAACACTGAGA+AGG 0.567325 2_3:+22335851 Msa0284400:CDS
TGCTTTCCAGGAAGCAGGGG+AGG 0.568330 2_3:+22336464 Msa0284400:CDS
CCTCCGCTTTACAAAGGTCG+TGG 0.571787 2_3:+22335334 Msa0284400:CDS
TTGCCTGATAACACTGTGGC+TGG 0.572437 2_3:+22335127 Msa0284400:CDS
TAACTGCTTTCCAGGAAGCA+GGG 0.573726 2_3:+22336460 Msa0284400:CDS
TCAAGAGATGGTGGATGCTG+GGG 0.574359 2_3:+22335957 Msa0284400:CDS
AAATTAAAGATGAAGATCTA+GGG 0.575955 2_3:+22336202 Msa0284400:CDS
GGTTGAGCTTTGCCCAGATG+AGG 0.577862 2_3:+22335696 Msa0284400:CDS
GCTGCTTTAAATCCCTATCA+GGG 0.580315 2_3:+22335400 Msa0284400:CDS
TGGTATGGAGGTTGAACTGT+TGG 0.582038 2_3:-22335307 None:intergenic
ATGTCGAGAACTTGAAGTAA+CGG 0.582274 2_3:-22332679 None:intergenic
CAAGCTACAATCACTGCCTA+CGG 0.586389 2_3:-22336719 None:intergenic
GTATAGAACCATCCTCATCT+GGG 0.586999 2_3:-22335708 None:intergenic
AATGTCACTGATAGGTCTGA+AGG 0.587612 2_3:-22335746 None:intergenic
ATTATATAATGACGAACAGA+AGG 0.587920 2_3:+22336617 Msa0284400:CDS
TTTCTAAGGACATCACTCAT+GGG 0.588441 2_3:+22336145 Msa0284400:CDS
AACTGCTTTCCAGGAAGCAG+GGG 0.589254 2_3:+22336461 Msa0284400:CDS
ATCGGTCCTCATGAATGATA+CGG 0.591847 2_3:-22336262 None:intergenic
AGGACAAAAGCTTCAAGAGA+TGG 0.592318 2_3:+22335945 Msa0284400:CDS
TTCCGATGGAGGTGAAATAC+GGG 0.595001 2_3:+22335522 Msa0284400:CDS
GGTAAGGTTAATGAATTCAG+TGG 0.596983 2_3:+22336006 Msa0284400:CDS
ACAAAAGCTTCAAGAGATGG+TGG 0.598927 2_3:+22335948 Msa0284400:CDS
TGAATTATTCTGCAGAGAGT+AGG 0.600929 2_3:+22336670 Msa0284400:CDS
CTCCACGAGCATTGTTATAG+CGG 0.600995 2_3:-22335468 None:intergenic
CATAGCGTGATGAGACGAAA+CGG 0.603251 2_3:-22332764 None:intergenic
TAGGTGGGCCATCAAGGCAA+GGG 0.604948 2_3:+22335423 Msa0284400:CDS
TCACAACCCCAATAACATCA+AGG 0.606648 2_3:-22335792 None:intergenic
CTTTAAATCCCTATCAGGGT+AGG 0.611287 2_3:+22335404 Msa0284400:CDS
AAATACTTGCGATTCTGAAG+CGG 0.611376 2_3:-22332871 None:intergenic
GTCGATCTCCAATCATCAGA+GGG 0.611616 2_3:-22336305 None:intergenic
AGCTGTGTAACAAAATGGAT+CGG 0.612353 2_3:-22336280 None:intergenic
GGATCATTCAGGATTAACTT+GGG 0.613069 2_3:+22336437 Msa0284400:CDS
GACTCGGTCGTTGAGTTGAG+CGG 0.615017 2_3:-22332791 None:intergenic
TTCTTAAGGTCTGAGCCTCA+GGG 0.623006 2_3:-22336080 None:intergenic
GCAACAACCACCACCAATGG+CGG 0.625257 2_3:+22332600 Msa0284400:exon
GTTTAGGCTGAAAATCAAAG+AGG 0.625551 2_3:+22336593 Msa0284400:CDS
GGTGAATTCTGCAACAGGGA+AGG 0.626099 2_3:+22335925 Msa0284400:CDS
TTCTAAGGACATCACTCATG+GGG 0.629562 2_3:+22336146 Msa0284400:CDS
GCCAGACTGGATAACAATGA+GGG 0.637901 2_3:+22336236 Msa0284400:CDS
GGTCGATCTCCAATCATCAG+AGG 0.638969 2_3:-22336306 None:intergenic
AAATCCCTATCAGGGTAGGT+GGG 0.640512 2_3:+22335408 Msa0284400:CDS
CAACCTCCTCCGCTTTACAA+AGG 0.641625 2_3:+22335328 Msa0284400:CDS
GTGATGAGACGAAACGGCGT+CGG 0.651118 2_3:-22332758 None:intergenic
AGCCAGACTGGATAACAATG+AGG 0.656016 2_3:+22336235 Msa0284400:CDS
CAGCCTTTACTGCTAAAATG+GGG 0.656745 2_3:-22335984 None:intergenic
TAACTCGTCCAGTATTGACT+CGG 0.656872 2_3:-22332807 None:intergenic
GCACCACGACCTTTGTAAAG+CGG 0.657064 2_3:-22335337 None:intergenic
GTAATCGAGAAGCTGAACGA+TGG 0.661747 2_3:-22332839 None:intergenic
CCACGACCTTTGTAAAGCGG+AGG 0.662907 2_3:-22335334 None:intergenic
GCAGTGTGATAGATGCAACC+AGG 0.664374 2_3:+22336368 Msa0284400:CDS
AATACTGGACGAGTTAAGCA+AGG 0.673990 2_3:+22332814 Msa0284400:CDS
TGTGTTGAAGTATGAACAGG+AGG 0.677244 2_3:+22336518 Msa0284400:CDS
GGGCAACCGTATCATTCATG+AGG 0.684770 2_3:+22336256 Msa0284400:CDS
AGTGTTGAGCTAACACTTTG+GGG 0.692814 2_3:+22335904 Msa0284400:CDS
CATAAATCCAGATTTCCCTG+AGG 0.709312 2_3:+22336065 Msa0284400:CDS
TTGGGGTGAATTCTGCAACA+GGG 0.712179 2_3:+22335921 Msa0284400:CDS
CGGCGTCGGAGAGAAGAAGA+CGG 0.718695 2_3:-22332744 None:intergenic
AAGCAGGGGAGGAGATTATG+GGG 0.738154 2_3:+22336475 Msa0284400:CDS
TCTAAGGACATCACTCATGG+GGG 0.753824 2_3:+22336147 Msa0284400:CDS
AGCATTGCCTGATAACACTG+TGG 0.782811 2_3:+22335123 Msa0284400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATTATTATTAATATTTC+TGG - chr2_3:22335158-22335177 None:intergenic 10.0%
!! CAGAAATATTAATAATAATT+TGG + chr2_3:22335156-22335175 Msa0284400:CDS 10.0%
!! ATTAAGCAACAAAAAAAGAA+GGG - chr2_3:22332902-22332921 None:intergenic 20.0%
!! AATTAAGCAACAAAAAAAGA+AGG - chr2_3:22332903-22332922 None:intergenic 20.0%
!! TAACAATTAGTGTATGAATT+AGG + chr2_3:22333056-22333075 Msa0284400:intron 20.0%
!!! TGTGATTTTCACTTTTTATT+AGG + chr2_3:22333155-22333174 Msa0284400:intron 20.0%
!!! TATTTCTAAGAATTAGGATA+TGG + chr2_3:22333379-22333398 Msa0284400:intron 20.0%
!!! TTATGTACATTTCACTTTTT+AGG + chr2_3:22333480-22333499 Msa0284400:intron 20.0%
!! TAATTGTTAGTGTAAGAATT+AGG + chr2_3:22334103-22334122 Msa0284400:intron 20.0%
!!! TGTATCATCAATAACATTTT+AGG - chr2_3:22334261-22334280 None:intergenic 20.0%
!!! AACATTTTAGGTTGAAAATT+TGG - chr2_3:22334249-22334268 None:intergenic 20.0%
!!! ATTTTCAACCTAAAATGTTA+TGG + chr2_3:22334250-22334269 Msa0284400:intron 20.0%
!!! AATGTTTTAGGTTGAAATTT+TGG - chr2_3:22334671-22334690 None:intergenic 20.0%
!! TACATAAGTGTTATATTCTT+TGG + chr2_3:22334714-22334733 Msa0284400:intron 20.0%
!! TGTATCATCTATAATGTTTA+GGG - chr2_3:22334886-22334905 None:intergenic 20.0%
!! ATGTATCATCTATAATGTTT+AGG - chr2_3:22334887-22334906 None:intergenic 20.0%
!! AAATTAAAGATGAAGATCTA+GGG + chr2_3:22336202-22336221 Msa0284400:CDS 20.0%
!! TTAATCGATTATCGTGTTTT+TGG + chr2_3:22332950-22332969 Msa0284400:intron 25.0%
! TTAGTGTATGAATTAGGATA+TGG + chr2_3:22333062-22333081 Msa0284400:intron 25.0%
! AAGTTGCATTTGTAAGAATT+AGG + chr2_3:22333209-22333228 Msa0284400:intron 25.0%
!!! TTATGTGCATTTCACTTTTT+AGG + chr2_3:22333321-22333340 Msa0284400:intron 25.0%
!! GAGTTGTATTTCTAAGAATT+AGG + chr2_3:22333373-22333392 Msa0284400:intron 25.0%
!! CAAATTTTGAACTAAAGCAA+TGG - chr2_3:22334049-22334068 None:intergenic 25.0%
! TTAGTGATAGTATTAGGATA+TGG + chr2_3:22334331-22334350 Msa0284400:intron 25.0%
!! GTGATAGTTAAATTACGTTT+TGG + chr2_3:22334371-22334390 Msa0284400:intron 25.0%
!! ATAATGTTTAGGGTGAAAAT+TGG - chr2_3:22334876-22334895 None:intergenic 25.0%
! AAAGTTTACTTGATATCGAA+AGG + chr2_3:22335598-22335617 Msa0284400:CDS 25.0%
! TCAATCATTTGAAGAATGAA+TGG + chr2_3:22335647-22335666 Msa0284400:CDS 25.0%
! CAATCATTTGAAGAATGAAT+GGG + chr2_3:22335648-22335667 Msa0284400:CDS 25.0%
! TATGCTGGATTTAAATTCAA+CGG + chr2_3:22335675-22335694 Msa0284400:CDS 25.0%
! CAAATTAAAGATGAAGATCT+AGG + chr2_3:22336201-22336220 Msa0284400:CDS 25.0%
! ATTATATAATGACGAACAGA+AGG + chr2_3:22336617-22336636 Msa0284400:CDS 25.0%
CATTTGTAAGAATTAGGTGA+TGG + chr2_3:22333215-22333234 Msa0284400:intron 30.0%
! GTGATGGAATCTTATATTGA+TGG + chr2_3:22333231-22333250 Msa0284400:intron 30.0%
!! AATACAACTCTAGAACGATT+AGG - chr2_3:22333363-22333382 None:intergenic 30.0%
GTTATCACATTTCATCAACA+AGG - chr2_3:22333407-22333426 None:intergenic 30.0%
AACGTTCTGATAGATGTATT+TGG + chr2_3:22333524-22333543 Msa0284400:intron 30.0%
ACTATAACACTTTATTGTGG+CGG - chr2_3:22333877-22333896 None:intergenic 30.0%
TAGTCAAATAGCAACTATAG+CGG - chr2_3:22333901-22333920 None:intergenic 30.0%
!!! TTTTAGTTTCTTGTATCCCT+TGG + chr2_3:22334078-22334097 Msa0284400:intron 30.0%
! TTTAGTTTCTTGTATCCCTT+GGG + chr2_3:22334079-22334098 Msa0284400:intron 30.0%
TACACTAACAATTAACCCAA+GGG - chr2_3:22334097-22334116 None:intergenic 30.0%
TTACACTAACAATTAACCCA+AGG - chr2_3:22334098-22334117 None:intergenic 30.0%
GAGTGATTAGTGATAGTATT+AGG + chr2_3:22334325-22334344 Msa0284400:intron 30.0%
! TGCATCATCCATAACATTTT+AGG - chr2_3:22334477-22334496 None:intergenic 30.0%
AATGTTATGGATGATGCATT+TGG + chr2_3:22334479-22334498 Msa0284400:intron 30.0%
TGATTAATGTTATGGAACCT+CGG + chr2_3:22334544-22334563 Msa0284400:intron 30.0%
! TGCATCATCTACAATGTTTT+AGG - chr2_3:22334683-22334702 None:intergenic 30.0%
AACATTGTAGATGATGCATT+TGG + chr2_3:22334685-22334704 Msa0284400:intron 30.0%
AGATGATACATTAGAGCTTA+TGG + chr2_3:22334896-22334915 Msa0284400:intron 30.0%
! AATGCATCATAACTGACTTT+AGG + chr2_3:22334951-22334970 Msa0284400:intron 30.0%
TTCCTTGTACAGGATTATTA+TGG + chr2_3:22335015-22335034 Msa0284400:intron 30.0%
GATTATTATGGTGCTTAACA+TGG + chr2_3:22335027-22335046 Msa0284400:CDS 30.0%
GATTTCACAATCAGGTATTA+TGG - chr2_3:22335056-22335075 None:intergenic 30.0%
ATACCTGATTGTGAAATCAT+TGG + chr2_3:22335058-22335077 Msa0284400:CDS 30.0%
TACCTGATTGTGAAATCATT+GGG + chr2_3:22335059-22335078 Msa0284400:CDS 30.0%
!! AAATTTTTGTTGTAAAGCGG+AGG - chr2_3:22335247-22335266 None:intergenic 30.0%
TCCGCTTTACAACAAAAATT+TGG + chr2_3:22335246-22335265 Msa0284400:CDS 30.0%
!! GCCAAATTTTTGTTGTAAAG+CGG - chr2_3:22335250-22335269 None:intergenic 30.0%
AATGCTATCCTTGATGTTAT+TGG + chr2_3:22335784-22335803 Msa0284400:CDS 30.0%
ATGCTATCCTTGATGTTATT+GGG + chr2_3:22335785-22335804 Msa0284400:CDS 30.0%
TTGAATCTAAAGGACAATTC+TGG + chr2_3:22335877-22335896 Msa0284400:CDS 30.0%
TCTTCAATGAGTTTGTGTTT+AGG + chr2_3:22336577-22336596 Msa0284400:CDS 30.0%
!! ATTTTATTTCCAAGTTCCGT+AGG + chr2_3:22336703-22336722 Msa0284400:CDS 30.0%
! GTGTGTGGAGAAAGAAATTT+TGG - chr2_3:22332576-22332595 None:intergenic 35.0%
ATGTCGAGAACTTGAAGTAA+CGG - chr2_3:22332682-22332701 None:intergenic 35.0%
! AAATACTTGCGATTCTGAAG+CGG - chr2_3:22332874-22332893 None:intergenic 35.0%
!!! TTGTGTGCGTTTTGCTTTTT+AGG + chr2_3:22332991-22333010 Msa0284400:intron 35.0%
TGTTAGATCGTGGAAAATAG+TGG + chr2_3:22333556-22333575 Msa0284400:intron 35.0%
GTCAAATAGCTGTCAAAACA+TGG - chr2_3:22333644-22333663 None:intergenic 35.0%
!! CAGAAGTGCTTTAGTTCAAA+TGG + chr2_3:22333724-22333743 Msa0284400:intron 35.0%
!! GTTCAAATGGATTACATCAG+CGG + chr2_3:22333737-22333756 Msa0284400:intron 35.0%
GGCACTATAACACTTTATTG+TGG - chr2_3:22333880-22333899 None:intergenic 35.0%
! ACATAAGTGTTAGCTTCTTG+TGG + chr2_3:22334509-22334528 Msa0284400:intron 35.0%
TGGGCGAATGATTAATGTTA+TGG + chr2_3:22334536-22334555 Msa0284400:intron 35.0%
ATTATCATAGTTCACTACCG+AGG - chr2_3:22334564-22334583 None:intergenic 35.0%
GTAACTTCAGTGAAGAATTG+TGG + chr2_3:22334762-22334781 Msa0284400:intron 35.0%
!! GTGTTTGTTTTTCCTTGTAC+AGG + chr2_3:22335005-22335024 Msa0284400:intron 35.0%
CACCATAATAATCCTGTACA+AGG - chr2_3:22335020-22335039 None:intergenic 35.0%
TTCCCAATGATTTCACAATC+AGG - chr2_3:22335064-22335083 None:intergenic 35.0%
TCTGAATCCACAAATGACTT+TGG - chr2_3:22335088-22335107 None:intergenic 35.0%
CTCAAAATGCTGGTAGTAAT+GGG + chr2_3:22335182-22335201 Msa0284400:CDS 35.0%
TGGTGCAGTTATGAAAAATG+AGG + chr2_3:22335354-22335373 Msa0284400:CDS 35.0%
! TAGGGATTTAAAGCAGCTAT+AGG - chr2_3:22335397-22335416 None:intergenic 35.0%
CCTCAATTGCTTCATAGAAA+CGG - chr2_3:22335573-22335592 None:intergenic 35.0%
TTCTATGAAGCAATTGAGGT+TGG + chr2_3:22335574-22335593 Msa0284400:CDS 35.0%
TGATTGAAATTCTTCTGTGC+AGG - chr2_3:22335634-22335653 None:intergenic 35.0%
GAATGAATGGGAAATTATGC+TGG + chr2_3:22335660-22335679 Msa0284400:CDS 35.0%
TGCTATCCTTGATGTTATTG+GGG + chr2_3:22335786-22335805 Msa0284400:CDS 35.0%
ATTCCATTCTTCCTTACGAT+GGG - chr2_3:22335838-22335857 None:intergenic 35.0%
!!! GAGAAGGGTTTTGAATCTAA+AGG + chr2_3:22335867-22335886 Msa0284400:CDS 35.0%
!! TTTCCCCATTTTAGCAGTAA+AGG + chr2_3:22335981-22336000 Msa0284400:CDS 35.0%
GGTAAGGTTAATGAATTCAG+TGG + chr2_3:22336006-22336025 Msa0284400:CDS 35.0%
GAATTCAGTGGAAAGTCTAT+AGG + chr2_3:22336018-22336037 Msa0284400:CDS 35.0%
TTGATCAAACCAGGTTCTTA+AGG - chr2_3:22336097-22336116 None:intergenic 35.0%
TGCTTCTCTATCCATTTCTA+AGG + chr2_3:22336131-22336150 Msa0284400:CDS 35.0%
ATGAGTGATGTCCTTAGAAA+TGG - chr2_3:22336145-22336164 None:intergenic 35.0%
! ATTTCTAAGGACATCACTCA+TGG + chr2_3:22336144-22336163 Msa0284400:CDS 35.0%
! TTTCTAAGGACATCACTCAT+GGG + chr2_3:22336145-22336164 Msa0284400:CDS 35.0%
! GTTTTGCGTATCTCATTCTT+GGG - chr2_3:22336174-22336193 None:intergenic 35.0%
! AGTTTTGCGTATCTCATTCT+TGG - chr2_3:22336175-22336194 None:intergenic 35.0%
AGCTGTGTAACAAAATGGAT+CGG - chr2_3:22336283-22336302 None:intergenic 35.0%
! TTCGTCACTTTCTTATTGCA+CGG - chr2_3:22336330-22336349 None:intergenic 35.0%
AATAAGAAAGTGACGAAGTC+AGG + chr2_3:22336333-22336352 Msa0284400:CDS 35.0%
AAGTTAATCCTGAATGATCC+TGG - chr2_3:22336437-22336456 None:intergenic 35.0%
AGGATCATTCAGGATTAACT+TGG + chr2_3:22336436-22336455 Msa0284400:CDS 35.0%
GGATCATTCAGGATTAACTT+GGG + chr2_3:22336437-22336456 Msa0284400:CDS 35.0%
GTATGTGTTGAAGTATGAAC+AGG + chr2_3:22336515-22336534 Msa0284400:CDS 35.0%
GTTTAGGCTGAAAATCAAAG+AGG + chr2_3:22336593-22336612 Msa0284400:CDS 35.0%
GGTGAAGATTACAGTAGTTA+AGG + chr2_3:22336638-22336657 Msa0284400:CDS 35.0%
TACAGTAGTTAAGGCAGATA+AGG + chr2_3:22336647-22336666 Msa0284400:CDS 35.0%
TGAATTATTCTGCAGAGAGT+AGG + chr2_3:22336670-22336689 Msa0284400:CDS 35.0%
GAGAACTTGAAGTAACGGTT+TGG - chr2_3:22332677-22332696 None:intergenic 40.0%
!! ACGTTGTTGGTGAGAGTTTT+TGG - chr2_3:22332722-22332741 None:intergenic 40.0%
!! TAACTCGTCCAGTATTGACT+CGG - chr2_3:22332810-22332829 None:intergenic 40.0%
AATACTGGACGAGTTAAGCA+AGG + chr2_3:22332814-22332833 Msa0284400:CDS 40.0%
! GAATCAGTGTTGTTAGATCG+TGG + chr2_3:22333546-22333565 Msa0284400:intron 40.0%
! TGTTAGCTTCTTCTATCTCC+TGG + chr2_3:22334300-22334319 Msa0284400:intron 40.0%
! GTTAGCTTCTTCTATCTCCT+GGG + chr2_3:22334301-22334320 Msa0284400:intron 40.0%
TGGGAATCCAAAGTCATTTG+TGG + chr2_3:22335078-22335097 Msa0284400:CDS 40.0%
AATTTGGCTGCTCAAAATGC+TGG + chr2_3:22335172-22335191 Msa0284400:CDS 40.0%
GCTCAAAATGCTGGTAGTAA+TGG + chr2_3:22335181-22335200 Msa0284400:CDS 40.0%
!! GTAGTAATGGGCAGAATTTC+AGG + chr2_3:22335194-22335213 Msa0284400:CDS 40.0%
! TGGTATTGAGGTTGAACTGT+TGG - chr2_3:22335220-22335239 None:intergenic 40.0%
!! TTTTTGTTGTAAAGCGGAGG+AGG - chr2_3:22335244-22335263 None:intergenic 40.0%
CTCCAAATGCTGGTAGTAAT+GGG + chr2_3:22335272-22335291 Msa0284400:CDS 40.0%
!! GTAGTAATGGGCAGAATTTC+AGG + chr2_3:22335194-22335213 Msa0284400:CDS 40.0%
! AGCTGCTTTAAATCCCTATC+AGG + chr2_3:22335399-22335418 Msa0284400:CDS 40.0%
! GCTGCTTTAAATCCCTATCA+GGG + chr2_3:22335400-22335419 Msa0284400:CDS 40.0%
CTTTAAATCCCTATCAGGGT+AGG + chr2_3:22335404-22335423 Msa0284400:CDS 40.0%
TATAACAATGCTCGTGGAGA+TGG + chr2_3:22335472-22335491 Msa0284400:CDS 40.0%
TTTGATCTCCTTGATTCCGA+TGG + chr2_3:22335508-22335527 Msa0284400:CDS 40.0%
ATTCCGATGGAGGTGAAATA+CGG + chr2_3:22335521-22335540 Msa0284400:CDS 40.0%
CCGTTTCTATGAAGCAATTG+AGG + chr2_3:22335570-22335589 Msa0284400:CDS 40.0%
GTATAGAACCATCCTCATCT+GGG - chr2_3:22335711-22335730 None:intergenic 40.0%
CTGAAGGAGAATTGTTGTCT+AGG - chr2_3:22335733-22335752 None:intergenic 40.0%
AATGTCACTGATAGGTCTGA+AGG - chr2_3:22335749-22335768 None:intergenic 40.0%
ACAGTCTCAATGTCACTGAT+AGG - chr2_3:22335757-22335776 None:intergenic 40.0%
TCACAACCCCAATAACATCA+AGG - chr2_3:22335795-22335814 None:intergenic 40.0%
CATTCCATTCTTCCTTACGA+TGG - chr2_3:22335839-22335858 None:intergenic 40.0%
CATCGTAAGGAAGAATGGAA+TGG + chr2_3:22335837-22335856 Msa0284400:CDS 40.0%
ATGGAATGGAAACACTGAGA+AGG + chr2_3:22335851-22335870 Msa0284400:CDS 40.0%
TGGAATGGAAACACTGAGAA+GGG + chr2_3:22335852-22335871 Msa0284400:CDS 40.0%
!! AGAGTGTTGAGCTAACACTT+TGG + chr2_3:22335902-22335921 Msa0284400:CDS 40.0%
!! GAGTGTTGAGCTAACACTTT+GGG + chr2_3:22335903-22335922 Msa0284400:CDS 40.0%
! AGTGTTGAGCTAACACTTTG+GGG + chr2_3:22335904-22335923 Msa0284400:CDS 40.0%
AGGACAAAAGCTTCAAGAGA+TGG + chr2_3:22335945-22335964 Msa0284400:CDS 40.0%
ACAAAAGCTTCAAGAGATGG+TGG + chr2_3:22335948-22335967 Msa0284400:CDS 40.0%
CAGCCTTTACTGCTAAAATG+GGG - chr2_3:22335987-22336006 None:intergenic 40.0%
CCAGCCTTTACTGCTAAAAT+GGG - chr2_3:22335988-22336007 None:intergenic 40.0%
ACCAGCCTTTACTGCTAAAA+TGG - chr2_3:22335989-22336008 None:intergenic 40.0%
TTTAGCAGTAAAGGCTGGTA+AGG + chr2_3:22335990-22336009 Msa0284400:CDS 40.0%
CATAAATCCAGATTTCCCTG+AGG + chr2_3:22336065-22336084 Msa0284400:CDS 40.0%
! AGAACCTGGTTTGATCAAGT+TGG + chr2_3:22336099-22336118 Msa0284400:CDS 40.0%
! GAACCTGGTTTGATCAAGTT+GGG + chr2_3:22336100-22336119 Msa0284400:CDS 40.0%
TTTCCCAACTTGATCAAACC+AGG - chr2_3:22336106-22336125 None:intergenic 40.0%
! TTCTAAGGACATCACTCATG+GGG + chr2_3:22336146-22336165 Msa0284400:CDS 40.0%
ATCGGTCCTCATGAATGATA+CGG - chr2_3:22336265-22336284 None:intergenic 40.0%
AATCACATTCCTCAAACTCC+TGG - chr2_3:22336389-22336408 None:intergenic 40.0%
AATGATCCTGGATTTGAGCT+TGG - chr2_3:22336425-22336444 None:intergenic 40.0%
TGTGTTGAAGTATGAACAGG+AGG + chr2_3:22336518-22336537 Msa0284400:CDS 40.0%
GAAGAAGACGGTAACGTTGT+TGG - chr2_3:22332735-22332754 None:intergenic 45.0%
CATAGCGTGATGAGACGAAA+CGG - chr2_3:22332767-22332786 None:intergenic 45.0%
GTAATCGAGAAGCTGAACGA+TGG - chr2_3:22332842-22332861 None:intergenic 45.0%
GGATTACATCAGCGGTACTA+TGG + chr2_3:22333745-22333764 Msa0284400:intron 45.0%
CTATCACTAATCACTCTCCC+AGG - chr2_3:22334321-22334340 None:intergenic 45.0%
! TGTTAGCTTCTTGTGGCTCT+TGG + chr2_3:22334516-22334535 Msa0284400:intron 45.0%
! GTTAGCTTCTTGTGGCTCTT+GGG + chr2_3:22334517-22334536 Msa0284400:intron 45.0%
TCAGGCAATGCTTTCTGAAC+TGG - chr2_3:22335115-22335134 None:intergenic 45.0%
AGCATTGCCTGATAACACTG+TGG + chr2_3:22335123-22335142 Msa0284400:CDS 45.0%
AATTTGGCTGCTCCAAATGC+TGG + chr2_3:22335262-22335281 Msa0284400:CDS 45.0%
GCTCCAAATGCTGGTAGTAA+TGG + chr2_3:22335271-22335290 Msa0284400:CDS 45.0%
TGCCCATTACTACCAGCATT+TGG - chr2_3:22335187-22335206 None:intergenic 45.0%
TGGTATGGAGGTTGAACTGT+TGG - chr2_3:22335310-22335329 None:intergenic 45.0%
GCTATAGGTATTACACGTGC+TGG - chr2_3:22335382-22335401 None:intergenic 45.0%
TAAATCCCTATCAGGGTAGG+TGG + chr2_3:22335407-22335426 Msa0284400:CDS 45.0%
AAATCCCTATCAGGGTAGGT+GGG + chr2_3:22335408-22335427 Msa0284400:CDS 45.0%
AAGGCAAGGGTTACTGCAAA+AGG + chr2_3:22335436-22335455 Msa0284400:CDS 45.0%
! CTCCACGAGCATTGTTATAG+CGG - chr2_3:22335471-22335490 None:intergenic 45.0%
TTTCACCTCCATCGGAATCA+AGG - chr2_3:22335519-22335538 None:intergenic 45.0%
TTCCGATGGAGGTGAAATAC+GGG + chr2_3:22335522-22335541 Msa0284400:CDS 45.0%
TACCCGTATTTCACCTCCAT+CGG - chr2_3:22335527-22335546 None:intergenic 45.0%
GGTATAGAACCATCCTCATC+TGG - chr2_3:22335712-22335731 None:intergenic 45.0%
ATCCTTCAGTTCCCATCGTA+AGG + chr2_3:22335824-22335843 Msa0284400:CDS 45.0%
TTCCTTACGATGGGAACTGA+AGG - chr2_3:22335829-22335848 None:intergenic 45.0%
GTTCCCATCGTAAGGAAGAA+TGG + chr2_3:22335832-22335851 Msa0284400:CDS 45.0%
! TTTGGGGTGAATTCTGCAAC+AGG + chr2_3:22335920-22335939 Msa0284400:CDS 45.0%
TTGGGGTGAATTCTGCAACA+GGG + chr2_3:22335921-22335940 Msa0284400:CDS 45.0%
!! TTCAAGAGATGGTGGATGCT+GGG + chr2_3:22335956-22335975 Msa0284400:CDS 45.0%
!! CCCATTTTAGCAGTAAAGGC+TGG + chr2_3:22335985-22336004 Msa0284400:CDS 45.0%
TTCTTAAGGTCTGAGCCTCA+GGG - chr2_3:22336083-22336102 None:intergenic 45.0%
TCTAAGGACATCACTCATGG+GGG + chr2_3:22336147-22336166 Msa0284400:CDS 45.0%
AGCCAGACTGGATAACAATG+AGG + chr2_3:22336235-22336254 Msa0284400:CDS 45.0%
GCCAGACTGGATAACAATGA+GGG + chr2_3:22336236-22336255 Msa0284400:CDS 45.0%
GGGCAAGCTGTGTAACAAAA+TGG - chr2_3:22336288-22336307 None:intergenic 45.0%
GTCGATCTCCAATCATCAGA+GGG - chr2_3:22336308-22336327 None:intergenic 45.0%
CGAAGTCAGGAGACACAAAA+TGG + chr2_3:22336346-22336365 Msa0284400:CDS 45.0%
TAGATGCAACCAGGAGTTTG+AGG + chr2_3:22336377-22336396 Msa0284400:CDS 45.0%
GCTCAAATCCAGGATCATTC+AGG + chr2_3:22336426-22336445 Msa0284400:CDS 45.0%
AACTTGGGTAACTGCTTTCC+AGG + chr2_3:22336452-22336471 Msa0284400:CDS 45.0%
TAACTGCTTTCCAGGAAGCA+GGG + chr2_3:22336460-22336479 Msa0284400:CDS 45.0%
CAGGAGGATGATGAGAAGTT+TGG + chr2_3:22336534-22336553 Msa0284400:CDS 45.0%
TCTCACCGCAAACGCTATTC+CGG + chr2_3:22332627-22332646 Msa0284400:CDS 50.0%
TATCGCCGGAATAGCGTTTG+CGG - chr2_3:22332635-22332654 None:intergenic 50.0%
CTCAACGACCGAGTCAATAC+TGG + chr2_3:22332799-22332818 Msa0284400:CDS 50.0%
TTGCCTGATAACACTGTGGC+TGG + chr2_3:22335127-22335146 Msa0284400:CDS 50.0%
GAACCAGCCACAGTGTTATC+AGG - chr2_3:22335133-22335152 None:intergenic 50.0%
TGTTGTAAAGCGGAGGAGGT+TGG - chr2_3:22335240-22335259 None:intergenic 50.0%
!! TAAAGCGGAGGAGGTTGGTA+TGG - chr2_3:22335235-22335254 None:intergenic 50.0%
CTTTGTAAAGCGGAGGAGGT+TGG - chr2_3:22335330-22335349 None:intergenic 50.0%
CAACCTCCTCCGCTTTACAA+AGG + chr2_3:22335238-22335257 Msa0284400:CDS 50.0%
GCACCACGACCTTTGTAAAG+CGG - chr2_3:22335340-22335359 None:intergenic 50.0%
TGCAGTAACCCTTGCCTTGA+TGG - chr2_3:22335434-22335453 None:intergenic 50.0%
GATCTCCTTGATTCCGATGG+AGG + chr2_3:22335511-22335530 Msa0284400:CDS 50.0%
GGTGAATTCTGCAACAGGGA+AGG + chr2_3:22335925-22335944 Msa0284400:CDS 50.0%
!! CTTCAAGAGATGGTGGATGC+TGG + chr2_3:22335955-22335974 Msa0284400:CDS 50.0%
!! TCAAGAGATGGTGGATGCTG+GGG + chr2_3:22335957-22335976 Msa0284400:CDS 50.0%
GTTCTTAAGGTCTGAGCCTC+AGG - chr2_3:22336084-22336103 None:intergenic 50.0%
AGGCTCAGACCTTAAGAACC+TGG + chr2_3:22336085-22336104 Msa0284400:CDS 50.0%
! GATGAAGATCTAGGGCGTTC+AGG + chr2_3:22336210-22336229 Msa0284400:CDS 50.0%
GCCCTCATTGTTATCCAGTC+TGG - chr2_3:22336240-22336259 None:intergenic 50.0%
GGGCAACCGTATCATTCATG+AGG + chr2_3:22336256-22336275 Msa0284400:CDS 50.0%
ACAGCTTGCCCTCTGATGAT+TGG + chr2_3:22336297-22336316 Msa0284400:CDS 50.0%
GGTCGATCTCCAATCATCAG+AGG - chr2_3:22336309-22336328 None:intergenic 50.0%
GCAGTGTGATAGATGCAACC+AGG + chr2_3:22336368-22336387 Msa0284400:CDS 50.0%
CCTGGATTTGAGCTTGGAGA+AGG - chr2_3:22336419-22336438 None:intergenic 50.0%
CCTTCTCCAAGCTCAAATCC+AGG + chr2_3:22336416-22336435 Msa0284400:CDS 50.0%
GTAACTGCTTTCCAGGAAGC+AGG + chr2_3:22336459-22336478 Msa0284400:CDS 50.0%
AACTGCTTTCCAGGAAGCAG+GGG + chr2_3:22336461-22336480 Msa0284400:CDS 50.0%
GAAGCAGGGGAGGAGATTAT+GGG + chr2_3:22336474-22336493 Msa0284400:CDS 50.0%
AAGCAGGGGAGGAGATTATG+GGG + chr2_3:22336475-22336494 Msa0284400:CDS 50.0%
GTGGTTGTTGCGGTTGTGTG+TGG - chr2_3:22332591-22332610 None:intergenic 55.0%
ACCGCAACAACCACCACCAA+TGG + chr2_3:22332597-22332616 Msa0284400:exon 55.0%
!! GCCATTGGTGGTGGTTGTTG+CGG - chr2_3:22332601-22332620 None:intergenic 55.0%
GCAACAACCACCACCAATGG+CGG + chr2_3:22332600-22332619 Msa0284400:exon 55.0%
AGATTCACCGCCATTGGTGG+TGG - chr2_3:22332610-22332629 None:intergenic 55.0%
GTGAGATTCACCGCCATTGG+TGG - chr2_3:22332613-22332632 None:intergenic 55.0%
GCTATTCCGGCGATAATCGC+CGG + chr2_3:22332640-22332659 Msa0284400:CDS 55.0%
GTGATGAGACGAAACGGCGT+CGG - chr2_3:22332761-22332780 None:intergenic 55.0%
!! GACTCGGTCGTTGAGTTGAG+CGG - chr2_3:22332794-22332813 None:intergenic 55.0%
!! AGCGGAGGAGGTTGGTATTG+AGG - chr2_3:22335232-22335251 None:intergenic 55.0%
CGACCTTTGTAAAGCGGAGG+AGG - chr2_3:22335334-22335353 None:intergenic 55.0%
CCACGACCTTTGTAAAGCGG+AGG - chr2_3:22335337-22335356 None:intergenic 55.0%
CCTCCGCTTTACAAAGGTCG+TGG + chr2_3:22335334-22335353 Msa0284400:CDS 55.0%
ATGGCCCACCTACCCTGATA+GGG - chr2_3:22335415-22335434 None:intergenic 55.0%
TAGGTGGGCCATCAAGGCAA+GGG + chr2_3:22335423-22335442 Msa0284400:CDS 55.0%
CGCCGCTATAACAATGCTCG+TGG + chr2_3:22335466-22335485 Msa0284400:CDS 55.0%
GGTTGAGCTTTGCCCAGATG+AGG + chr2_3:22335696-22335715 Msa0284400:CDS 55.0%
GAGCTTTGCCCAGATGAGGA+TGG + chr2_3:22335700-22335719 Msa0284400:CDS 55.0%
GTCTGAGCCTCAGGGAAATC+TGG - chr2_3:22336075-22336094 None:intergenic 55.0%
TAATCTCCTCCCCTGCTTCC+TGG - chr2_3:22336473-22336492 None:intergenic 55.0%
GGAAGCAGGGGAGGAGATTA+TGG + chr2_3:22336473-22336492 Msa0284400:CDS 55.0%
GCGGTGAGATTCACCGCCAT+TGG - chr2_3:22332616-22332635 None:intergenic 60.0%
! CGGCGTCGGAGAGAAGAAGA+CGG - chr2_3:22332747-22332766 None:intergenic 60.0%
!! AGCGGAGGAGGTTGGTATGG+AGG - chr2_3:22335322-22335341 None:intergenic 60.0%
GATGGCCCACCTACCCTGAT+AGG - chr2_3:22335416-22335435 None:intergenic 60.0%
TCAGGGTAGGTGGGCCATCA+AGG + chr2_3:22335417-22335436 Msa0284400:CDS 60.0%
GTAGGTGGGCCATCAAGGCA+AGG + chr2_3:22335422-22335441 Msa0284400:CDS 60.0%
TGCTTTCCAGGAAGCAGGGG+AGG + chr2_3:22336464-22336483 Msa0284400:CDS 60.0%
ACGTCGCCGGCGATTATCGC+CGG - chr2_3:22332649-22332668 None:intergenic 65.0%
GGCGTTCAGGCAAGCCAGAC+TGG + chr2_3:22336223-22336242 Msa0284400:CDS 65.0%
!! CGGTTTGGCGTCGACGTCGC+CGG - chr2_3:22332662-22332681 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 22332568 22336731 22332568 ID=Msa0284400;Name=Msa0284400
chr2_3 mRNA 22332568 22336731 22332568 ID=Msa0284400-mRNA-1;Parent=Msa0284400;Name=Msa0284400-mRNA-1;_AED=0.02;_eAED=0.02;_QI=48|1|0.5|1|1|1|2|0|658
chr2_3 exon 22332568 22332887 22332568 ID=Msa0284400-mRNA-1:exon:8754;Parent=Msa0284400-mRNA-1
chr2_3 exon 22335027 22336731 22335027 ID=Msa0284400-mRNA-1:exon:8755;Parent=Msa0284400-mRNA-1
chr2_3 five_prime_UTR 22332568 22332615 22332568 ID=Msa0284400-mRNA-1:five_prime_utr;Parent=Msa0284400-mRNA-1
chr2_3 CDS 22332616 22332887 22332616 ID=Msa0284400-mRNA-1:cds;Parent=Msa0284400-mRNA-1
chr2_3 CDS 22335027 22336731 22335027 ID=Msa0284400-mRNA-1:cds;Parent=Msa0284400-mRNA-1
Gene Sequence

>Msa0284400

ATGGCGGTGAATCTCACCGCAAACGCTATTCCGGCGATAATCGCCGGCGACGTCGACGCCAAACCGTTACTTCAAGTTCTCGACATTGCAACAATCGTAAGCACCAAAAACTCTCACCAACAACGTTACCGTCTTCTTCTCTCCGACGCCGTTTCGTCTCATCACGCTATGCTCGCCGCTCAACTCAACGACCGAGTCAATACTGGACGAGTTAAGCAAGGTTCCATCGTTCAGCTTCTCGATTACATTTGCACTCCGCTTCAGAATCGCAAGATTATTATGGTGCTTAACATGGAAACCATAATACCTGATTGTGAAATCATTGGGAATCCAAAGTCATTTGTGGATTCAGAGTTACCAGTTCAGAAAGCATTGCCTGATAACACTGTGGCTGGTTCGTCCAGAAATATTAATAATAATTTGGCTGCTCAAAATGCTGGTAGTAATGGGCAGAATTTCAGGCCAACAGTTCAACCTCAATACCAACCTCCTCCGCTTTACAACAAAAATTTGGCTGCTCCAAATGCTGGTAGTAATGGGCAGAATTTCAGGCCAACAGTTCAACCTCCATACCAACCTCCTCCGCTTTACAAAGGTCGTGGTGCAGTTATGAAAAATGAGGCGCCAGCACGTGTAATACCTATAGCTGCTTTAAATCCCTATCAGGGTAGGTGGGCCATCAAGGCAAGGGTTACTGCAAAAGGAGATTTGCGCCGCTATAACAATGCTCGTGGAGATGGAAAAGTCTTCTCGTTTGATCTCCTTGATTCCGATGGAGGTGAAATACGGGTAACTTGCTTTAATGCTGTTGTTGACCGTTTCTATGAAGCAATTGAGGTTGGTAAAGTTTACTTGATATCGAAAGGTAGCTTGAAACCTGCACAGAAGAATTTCAATCATTTGAAGAATGAATGGGAAATTATGCTGGATTTAAATTCAACGGTTGAGCTTTGCCCAGATGAGGATGGTTCTATACCTAGACAACAATTCTCCTTCAGACCTATCAGTGACATTGAGACTGTTGAGAGTAATGCTATCCTTGATGTTATTGGGGTTGTGACATCTGTAAATCCTTCAGTTCCCATCGTAAGGAAGAATGGAATGGAAACACTGAGAAGGGTTTTGAATCTAAAGGACAATTCTGGCAAGAGTGTTGAGCTAACACTTTGGGGTGAATTCTGCAACAGGGAAGGACAAAAGCTTCAAGAGATGGTGGATGCTGGGGTTTTCCCCATTTTAGCAGTAAAGGCTGGTAAGGTTAATGAATTCAGTGGAAAGTCTATAGGCTCTATTTCTACTACACAGCTTTTCATAAATCCAGATTTCCCTGAGGCTCAGACCTTAAGAACCTGGTTTGATCAAGTTGGGAAAGATTCTGCTTCTCTATCCATTTCTAAGGACATCACTCATGGGGGACCCAAGAATGAGATACGCAAAACTGTGTCTCAAATTAAAGATGAAGATCTAGGGCGTTCAGGCAAGCCAGACTGGATAACAATGAGGGCAACCGTATCATTCATGAGGACCGATCCATTTTGTTACACAGCTTGCCCTCTGATGATTGGAGATCGACCGTGCAATAAGAAAGTGACGAAGTCAGGAGACACAAAATGGCAGTGTGATAGATGCAACCAGGAGTTTGAGGAATGTGATTATCGTTACCTTCTCCAAGCTCAAATCCAGGATCATTCAGGATTAACTTGGGTAACTGCTTTCCAGGAAGCAGGGGAGGAGATTATGGGGTACTCAGCAAAAGATCTGTATGTGTTGAAGTATGAACAGGAGGATGATGAGAAGTTTGGAGATATAATTAAGAGTAGACTCTTCAATGAGTTTGTGTTTAGGCTGAAAATCAAAGAGGAATTATATAATGACGAACAGAAGGTGAAGATTACAGTAGTTAAGGCAGATAAGGTGAATTATTCTGCAGAGAGTAGGTACATGCTTGATTTTATTTCCAAGTTCCGTAGGCAGTGA
Protein sequence

>Msa0284400

MAVNLTANAIPAIIAGDVDAKPLLQVLDIATIVSTKNSHQQRYRLLLSDAVSSHHAMLAAQLNDRVNTGRVKQGSIVQLLDYICTPLQNRKIIMVLNMETIIPDCEIIGNPKSFVDSELPVQKALPDNTVAGSSRNINNNLAAQNAGSNGQNFRPTVQPQYQPPPLYNKNLAAPNAGSNGQNFRPTVQPPYQPPPLYKGRGAVMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEAIEVGKVYLISKGSLKPAQKNFNHLKNEWEIMLDLNSTVELCPDEDGSIPRQQFSFRPISDIETVESNAILDVIGVVTSVNPSVPIVRKNGMETLRRVLNLKDNSGKSVELTLWGEFCNREGQKLQEMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQTLRTWFDQVGKDSASLSISKDITHGGPKNEIRKTVSQIKDEDLGRSGKPDWITMRATVSFMRTDPFCYTACPLMIGDRPCNKKVTKSGDTKWQCDRCNQEFEECDYRYLLQAQIQDHSGLTWVTAFQEAGEEIMGYSAKDLYVLKYEQEDDEKFGDIIKSRLFNEFVFRLKIKEELYNDEQKVKITVVKADKVNYSAESRYMLDFISKFRRQ*