Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288570 | XP_024632301.1 | 82.888 | 187 | 1 | 1 | 1 | 187 | 1 | 156 | 5.25e-104 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288570 | sp|P49592|NC2B_ARATH | 66.486 | 185 | 29 | 2 | 1 | 183 | 1 | 154 | 1.40e-80 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288570 | I3S9B6 | 82.888 | 187 | 1 | 1 | 1 | 187 | 1 | 156 | 2.51e-104 | 305 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0288570 | TF | NF-YB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0288560 | Msa0288570 | 0.959995 | 4.645971e-118 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288570 | MtrunA17_Chr2g0307551 | 82.888 | 187 | 1 | 1 | 1 | 187 | 1 | 156 | 4.83e-108 | 305 |
| Msa0288570 | MtrunA17_Chr4g0062271 | 70.652 | 184 | 23 | 1 | 1 | 184 | 1 | 153 | 3.05e-90 | 260 |
| Msa0288570 | MtrunA17_Chr1g0185911 | 40.449 | 89 | 51 | 1 | 8 | 94 | 26 | 114 | 4.80e-18 | 77.4 |
| Msa0288570 | MtrunA17_Chr4g0076381 | 39.241 | 79 | 48 | 0 | 11 | 89 | 58 | 136 | 6.58e-17 | 75.9 |
| Msa0288570 | MtrunA17_Chr1g0195851 | 37.179 | 78 | 49 | 0 | 12 | 89 | 37 | 114 | 7.66e-17 | 74.7 |
| Msa0288570 | MtrunA17_Chr7g0263601 | 37.500 | 80 | 50 | 0 | 12 | 91 | 27 | 106 | 3.44e-16 | 72.4 |
| Msa0288570 | MtrunA17_Chr1g0191981 | 35.443 | 79 | 51 | 0 | 13 | 91 | 6 | 84 | 5.23e-16 | 70.9 |
| Msa0288570 | MtrunA17_Chr1g0165041 | 33.333 | 81 | 54 | 0 | 11 | 91 | 6 | 86 | 8.52e-16 | 72.0 |
| Msa0288570 | MtrunA17_Chr3g0102351 | 37.179 | 78 | 49 | 0 | 12 | 89 | 28 | 105 | 1.16e-15 | 71.6 |
| Msa0288570 | MtrunA17_Chr5g0446491 | 34.118 | 85 | 56 | 0 | 7 | 91 | 19 | 103 | 2.58e-15 | 70.5 |
| Msa0288570 | MtrunA17_Chr4g0067091 | 37.179 | 78 | 49 | 0 | 12 | 89 | 23 | 100 | 8.69e-15 | 69.7 |
| Msa0288570 | MtrunA17_Chr8g0384451 | 31.818 | 88 | 60 | 0 | 12 | 99 | 41 | 128 | 1.99e-14 | 68.6 |
| Msa0288570 | MtrunA17_Chr2g0290491 | 33.333 | 78 | 52 | 0 | 12 | 89 | 18 | 95 | 5.34e-14 | 66.6 |
| Msa0288570 | MtrunA17_Chr8g0382931 | 32.143 | 84 | 57 | 0 | 5 | 88 | 22 | 105 | 7.08e-14 | 67.0 |
| Msa0288570 | MtrunA17_Chr2g0296321 | 37.179 | 78 | 49 | 0 | 12 | 89 | 67 | 144 | 2.06e-13 | 66.6 |
| Msa0288570 | MtrunA17_Chr4g0076321 | 35.135 | 74 | 48 | 0 | 16 | 89 | 24 | 97 | 6.83e-13 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288570 | AT5G23090.5 | 66.486 | 185 | 29 | 2 | 1 | 183 | 1 | 154 | 1.42e-81 | 239 |
| Msa0288570 | AT5G23090.2 | 66.486 | 185 | 29 | 2 | 1 | 183 | 1 | 154 | 1.42e-81 | 239 |
| Msa0288570 | AT5G23090.1 | 66.486 | 185 | 29 | 2 | 1 | 183 | 1 | 154 | 1.42e-81 | 239 |
| Msa0288570 | AT5G23090.4 | 65.946 | 185 | 29 | 2 | 1 | 183 | 1 | 153 | 1.24e-80 | 236 |
| Msa0288570 | AT5G08190.1 | 68.786 | 173 | 23 | 1 | 1 | 173 | 1 | 142 | 1.75e-72 | 216 |
| Msa0288570 | AT5G08190.2 | 68.208 | 173 | 23 | 1 | 1 | 173 | 1 | 141 | 1.84e-71 | 214 |
| Msa0288570 | AT5G23090.3 | 59.459 | 185 | 29 | 3 | 1 | 183 | 1 | 141 | 1.54e-67 | 203 |
| Msa0288570 | AT2G38880.11 | 34.653 | 101 | 62 | 2 | 12 | 108 | 22 | 122 | 6.86e-18 | 77.0 |
| Msa0288570 | AT2G38880.8 | 34.653 | 101 | 62 | 2 | 12 | 108 | 22 | 122 | 6.86e-18 | 77.0 |
| Msa0288570 | AT2G38880.4 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 1.79e-17 | 74.7 |
| Msa0288570 | AT2G38880.7 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 1.83e-17 | 75.5 |
| Msa0288570 | AT2G38880.2 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 1.91e-17 | 75.5 |
| Msa0288570 | AT2G38880.1 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 1.91e-17 | 75.5 |
| Msa0288570 | AT2G38880.5 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 1.91e-17 | 75.5 |
| Msa0288570 | AT2G38880.3 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 3.05e-17 | 74.7 |
| Msa0288570 | AT2G37060.2 | 38.750 | 80 | 49 | 0 | 12 | 91 | 31 | 110 | 1.75e-16 | 73.6 |
| Msa0288570 | AT2G37060.3 | 38.750 | 80 | 49 | 0 | 12 | 91 | 31 | 110 | 1.75e-16 | 73.6 |
| Msa0288570 | AT2G37060.1 | 38.750 | 80 | 49 | 0 | 12 | 91 | 31 | 110 | 1.75e-16 | 73.6 |
| Msa0288570 | AT2G38880.9 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 3.74e-16 | 72.4 |
| Msa0288570 | AT2G38880.10 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 3.74e-16 | 72.4 |
| Msa0288570 | AT2G38880.6 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 3.74e-16 | 72.4 |
| Msa0288570 | AT3G53340.5 | 39.744 | 78 | 47 | 0 | 12 | 89 | 30 | 107 | 5.60e-16 | 72.4 |
| Msa0288570 | AT3G53340.1 | 39.744 | 78 | 47 | 0 | 12 | 89 | 30 | 107 | 5.60e-16 | 72.4 |
| Msa0288570 | AT3G53340.4 | 39.744 | 78 | 47 | 0 | 12 | 89 | 30 | 107 | 8.21e-16 | 70.5 |
| Msa0288570 | AT5G47670.2 | 37.975 | 79 | 49 | 0 | 11 | 89 | 29 | 107 | 1.52e-15 | 72.0 |
| Msa0288570 | AT4G14540.1 | 31.818 | 88 | 60 | 0 | 12 | 99 | 22 | 109 | 1.79e-15 | 70.9 |
| Msa0288570 | AT5G47670.1 | 37.037 | 81 | 51 | 0 | 11 | 91 | 58 | 138 | 2.61e-15 | 71.6 |
| Msa0288570 | AT5G47670.3 | 37.037 | 81 | 51 | 0 | 11 | 91 | 58 | 138 | 2.61e-15 | 71.6 |
| Msa0288570 | AT3G53340.3 | 35.227 | 88 | 57 | 0 | 12 | 99 | 30 | 117 | 2.68e-15 | 70.1 |
| Msa0288570 | AT3G53340.2 | 35.227 | 88 | 57 | 0 | 12 | 99 | 30 | 117 | 2.68e-15 | 70.1 |
| Msa0288570 | AT5G47640.1 | 35.897 | 78 | 50 | 0 | 12 | 89 | 28 | 105 | 1.37e-14 | 68.9 |
| Msa0288570 | AT1G21970.1 | 34.568 | 81 | 53 | 0 | 11 | 91 | 59 | 139 | 3.01e-14 | 68.9 |
| Msa0288570 | AT1G09030.1 | 33.750 | 80 | 53 | 0 | 12 | 91 | 4 | 83 | 1.23e-13 | 65.5 |
| Msa0288570 | AT2G13570.1 | 35.065 | 77 | 50 | 0 | 12 | 88 | 37 | 113 | 1.86e-13 | 66.6 |
| Msa0288570 | AT2G47810.1 | 32.895 | 76 | 51 | 0 | 12 | 87 | 52 | 127 | 1.02e-12 | 63.5 |
Find 74 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCCAAGTTGCTTACAATA+TGG | 0.233940 | 2_3:-33927476 | None:intergenic |
| AAGTTAATGTAATTAATTAA+TGG | 0.241152 | 2_3:+33928292 | Msa0288570:three_prime_UTR |
| ATATATCAGGTTCTTGGATT+TGG | 0.252299 | 2_3:+33927003 | Msa0288570:intron |
| GAGCATGTATTGAAAGCTTT+AGG | 0.252682 | 2_3:+33926203 | Msa0288570:CDS |
| AAGTTTAGAGAACTAACTTT+AGG | 0.270141 | 2_3:+33928123 | Msa0288570:exon |
| TTATTTATATATCAGGTTCT+TGG | 0.293604 | 2_3:+33926997 | Msa0288570:intron |
| ACTAATTGAATTTGAAGATC+TGG | 0.306860 | 2_3:-33924854 | None:intergenic |
| TGAGAGGTCTCTGTATCTTT+AGG | 0.314082 | 2_3:-33927524 | None:intergenic |
| TAATTATAATAAACTATAAT+AGG | 0.328224 | 2_3:-33928437 | None:intergenic |
| CTGCAGCAAGACTCTATAAA+AGG | 0.346677 | 2_3:+33927971 | Msa0288570:intron |
| GAACACTCTTTCTCGTTGTT+TGG | 0.347353 | 2_3:+33924722 | Msa0288570:five_prime_UTR |
| AACATTCAATTAACAAATCC+TGG | 0.352577 | 2_3:-33925250 | None:intergenic |
| AGTTTAGAGAACTAACTTTA+GGG | 0.366270 | 2_3:+33928124 | Msa0288570:exon |
| AGCATGTATTGAAAGCTTTA+GGG | 0.375222 | 2_3:+33926204 | Msa0288570:CDS |
| TCTAAACTTTGGTCAGCATC+TGG | 0.377371 | 2_3:-33928109 | None:intergenic |
| TGCCAAGTTGCTTACAATAT+GGG | 0.382608 | 2_3:-33927475 | None:intergenic |
| TTGGTCAGCATCTGGTTGAT+TGG | 0.384189 | 2_3:-33928101 | None:intergenic |
| AGACTCACCGATTGAATTTG+AGG | 0.392146 | 2_3:-33924907 | None:intergenic |
| TATCACTAACAGAACACAAA+TGG | 0.404771 | 2_3:-33928260 | None:intergenic |
| AAAGTTAGTTCTCTAAACTT+TGG | 0.415113 | 2_3:-33928120 | None:intergenic |
| TAATACAAAGATGGAGCCTA+TGG | 0.442593 | 2_3:+33925024 | Msa0288570:exon |
| TTCTCATCCTCAAATTCAAT+CGG | 0.446802 | 2_3:+33924900 | Msa0288570:five_prime_UTR |
| ATCACTAACAGAACACAAAT+GGG | 0.449836 | 2_3:-33928259 | None:intergenic |
| CTAATTGAATTTGAAGATCT+GGG | 0.451944 | 2_3:-33924853 | None:intergenic |
| CTCTGCTAATGCTTGTTCCT+CGG | 0.457821 | 2_3:-33928023 | None:intergenic |
| CTCAGCTGCACCGCTCCACT+TGG | 0.465501 | 2_3:-33927996 | None:intergenic |
| CTTTAGGTTGCCTTGCCCAC+AGG | 0.478226 | 2_3:-33927508 | None:intergenic |
| AAGAGAAGATGAAGAGATGA+GGG | 0.481364 | 2_3:-33924783 | None:intergenic |
| AAAGCTTTCAATACATGCTC+AGG | 0.483166 | 2_3:-33926200 | None:intergenic |
| TCTCTTGCAACACGGACATC+AGG | 0.499892 | 2_3:-33925224 | None:intergenic |
| GAGGCACGTGCTAGAATGAA+TGG | 0.500006 | 2_3:+33928064 | Msa0288570:CDS |
| GACCTCTCAGTGTGAGGTCA+AGG | 0.512725 | 2_3:+33927538 | Msa0288570:CDS |
| TAAATTATGTCCTGTGGGCA+AGG | 0.512980 | 2_3:+33927498 | Msa0288570:CDS |
| TACGTACTGGATGGATAAGA+AGG | 0.517573 | 2_3:-33924747 | None:intergenic |
| GAAGATGAAGAGATGAGGGT+TGG | 0.517884 | 2_3:-33924779 | None:intergenic |
| TTCCCATATTGTAAGCAACT+TGG | 0.519922 | 2_3:+33927473 | Msa0288570:CDS |
| AAACTCATTCACTACTGTGC+TGG | 0.521490 | 2_3:+33928219 | Msa0288570:three_prime_UTR |
| TATGTAACAGAGAGGAAAGA+AGG | 0.521621 | 2_3:+33926168 | Msa0288570:CDS |
| GAAGATGCTTCGCTACCTAA+AGG | 0.522042 | 2_3:+33925067 | Msa0288570:CDS |
| AAAGAGAAGATGAAGAGATG+AGG | 0.525840 | 2_3:-33924784 | None:intergenic |
| TTGTTAATTGAATGTTGTGT+AGG | 0.530693 | 2_3:+33925257 | Msa0288570:CDS |
| TCATAATAATAATACAAAGA+TGG | 0.534014 | 2_3:+33925015 | Msa0288570:exon |
| AAGCATTAGCAGAGCAGCAA+AGG | 0.547129 | 2_3:+33928032 | Msa0288570:CDS |
| GATTTAGCAACAATATCCAT+AGG | 0.550892 | 2_3:-33925040 | None:intergenic |
| CATTTGACTCTGATGAGACG+AGG | 0.555057 | 2_3:-33926142 | None:intergenic |
| AATGGGGAGCACATCTACAT+AGG | 0.563367 | 2_3:-33928242 | None:intergenic |
| TTGGCATAAATTATGTCCTG+TGG | 0.570623 | 2_3:+33927492 | Msa0288570:CDS |
| CATATAATTCTAAATAGACA+AGG | 0.573633 | 2_3:-33928328 | None:intergenic |
| ATCTGGTTGATTGGAAGTAA+CGG | 0.576071 | 2_3:-33928092 | None:intergenic |
| TGGATTTGGCGAGTACATTG+AGG | 0.592411 | 2_3:+33927017 | Msa0288570:CDS |
| GGATATTGTTGCTAAATCAA+AGG | 0.593602 | 2_3:+33925045 | Msa0288570:CDS |
| ACATTCAATTAACAAATCCT+GGG | 0.595298 | 2_3:-33925249 | None:intergenic |
| TGGCATAAATTATGTCCTGT+GGG | 0.610405 | 2_3:+33927493 | Msa0288570:CDS |
| AATCGAGCTAAATTACCCAC+AGG | 0.617452 | 2_3:-33928189 | None:intergenic |
| GCATGTATTGAAAGCTTTAG+GGG | 0.617694 | 2_3:+33926205 | Msa0288570:CDS |
| AGCATATGAACAGCACAAGA+TGG | 0.618530 | 2_3:+33927050 | Msa0288570:CDS |
| CCTGGGTATCTCTTGCAACA+CGG | 0.619026 | 2_3:-33925232 | None:intergenic |
| CCGTGTTGCAAGAGATACCC+AGG | 0.621479 | 2_3:+33925232 | Msa0288570:CDS |
| CATCTCTGACTCTTACCTGT+GGG | 0.621607 | 2_3:+33928174 | Msa0288570:three_prime_UTR |
| GCATCTCTGACTCTTACCTG+TGG | 0.621691 | 2_3:+33928173 | Msa0288570:three_prime_UTR |
| CACCTTGACCTCACACTGAG+AGG | 0.628357 | 2_3:-33927540 | None:intergenic |
| CTTGCAACACGGACATCAGG+TGG | 0.632584 | 2_3:-33925221 | None:intergenic |
| TACAGAGACCTCTCAGTGTG+AGG | 0.636220 | 2_3:+33927532 | Msa0288570:CDS |
| GCAGCAAAGGATGTTTGCAG+AGG | 0.645184 | 2_3:+33928045 | Msa0288570:CDS |
| ACTCTATAAAAGGTGCCAAG+TGG | 0.646573 | 2_3:+33927981 | Msa0288570:CDS |
| ATAAAAGGTGCCAAGTGGAG+CGG | 0.655175 | 2_3:+33927986 | Msa0288570:CDS |
| ATATAATTCTAAATAGACAA+GGG | 0.661018 | 2_3:-33928327 | None:intergenic |
| GCACGTGCTAGAATGAATGG+AGG | 0.666011 | 2_3:+33928067 | Msa0288570:CDS |
| CACGTGCTAGAATGAATGGA+GGG | 0.684842 | 2_3:+33928068 | Msa0288570:CDS |
| AAATGAAGTATGTAACAGAG+AGG | 0.704349 | 2_3:+33926160 | Msa0288570:CDS |
| CGGTGCAGCTGAGATGACCG+AGG | 0.707136 | 2_3:+33928006 | Msa0288570:CDS |
| ACAGCACAAGATGGAGACAG+TGG | 0.723145 | 2_3:+33927059 | Msa0288570:CDS |
| ATTGAATTTGAAGATCTGGG+AGG | 0.725458 | 2_3:-33924850 | None:intergenic |
| TCACTAACAGAACACAAATG+GGG | 0.727901 | 2_3:-33928258 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTTTTTAAAATAA+AGG | + | chr2_3:33926573-33926592 | Msa0288570:intron | 0.0% |
| !!! | TTATTTTTTTTTAAAATAAA+GGG | + | chr2_3:33926574-33926593 | Msa0288570:intron | 0.0% |
| !! | AAAATAAAAATTATACCTTT+AGG | - | chr2_3:33925085-33925104 | None:intergenic | 10.0% |
| !! | CATATTATTAATTAATTAAC+TGG | + | chr2_3:33927866-33927885 | Msa0288570:intron | 10.0% |
| !! | AAGTTAATGTAATTAATTAA+TGG | + | chr2_3:33928292-33928311 | Msa0288570:three_prime_UTR | 10.0% |
| !! | TCATAATAATAATACAAAGA+TGG | + | chr2_3:33925015-33925034 | Msa0288570:exon | 15.0% |
| !! | AAATAATAGATAAATTATGC+AGG | - | chr2_3:33925591-33925610 | None:intergenic | 15.0% |
| !! | CAATCAAATTAAAATTGAAA+AGG | - | chr2_3:33926279-33926298 | None:intergenic | 15.0% |
| !! | AAAACAAATGATAGTTAATA+TGG | - | chr2_3:33926463-33926482 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAAATAAAGGG+AGG | + | chr2_3:33926577-33926596 | Msa0288570:intron | 15.0% |
| !!! | TTTTTTTTAAAATAAAGGGA+GGG | + | chr2_3:33926578-33926597 | Msa0288570:intron | 15.0% |
| !! | GTCATATTTATTTATATATC+AGG | + | chr2_3:33926990-33927009 | Msa0288570:intron | 15.0% |
| !!! | TTATTTTCAAATAATACTAG+TGG | + | chr2_3:33927381-33927400 | Msa0288570:intron | 15.0% |
| !! | ATTGAAATCTTTATGATTTA+TGG | + | chr2_3:33927670-33927689 | Msa0288570:intron | 15.0% |
| !! | ATATAATTCTAAATAGACAA+GGG | - | chr2_3:33928330-33928349 | None:intergenic | 15.0% |
| !! | AATTATGGCTTCATTAATTA+TGG | - | chr2_3:33925449-33925468 | None:intergenic | 20.0% |
| !! | ATCAAAATTTGGAGATAAAA+GGG | - | chr2_3:33926250-33926269 | None:intergenic | 20.0% |
| !! | ATATTGTAATCAATTGTCAA+TGG | - | chr2_3:33926760-33926779 | None:intergenic | 20.0% |
| !!! | GTTTAGAATTTTGCAATAAA+AGG | + | chr2_3:33926837-33926856 | Msa0288570:intron | 20.0% |
| !! | TTATTTATATATCAGGTTCT+TGG | + | chr2_3:33926997-33927016 | Msa0288570:intron | 20.0% |
| !!! | ATTGATAACTCAAACAATTT+GGG | - | chr2_3:33927307-33927326 | None:intergenic | 20.0% |
| !!! | TATTGATAACTCAAACAATT+TGG | - | chr2_3:33927308-33927327 | None:intergenic | 20.0% |
| !! | CATATAATTCTAAATAGACA+AGG | - | chr2_3:33928331-33928350 | None:intergenic | 20.0% |
| ! | CTAATTGAATTTGAAGATCT+GGG | - | chr2_3:33924856-33924875 | None:intergenic | 25.0% |
| ! | ACTAATTGAATTTGAAGATC+TGG | - | chr2_3:33924857-33924876 | None:intergenic | 25.0% |
| ! | AATTTGAGGATGAGAAAAAA+GGG | - | chr2_3:33924896-33924915 | None:intergenic | 25.0% |
| ! | ACATTCAATTAACAAATCCT+GGG | - | chr2_3:33925252-33925271 | None:intergenic | 25.0% |
| ! | AACATTCAATTAACAAATCC+TGG | - | chr2_3:33925253-33925272 | None:intergenic | 25.0% |
| ! | TTGTTAATTGAATGTTGTGT+AGG | + | chr2_3:33925257-33925276 | Msa0288570:CDS | 25.0% |
| !! | AAAAATCTGAAACAAACCAA+GGG | - | chr2_3:33925402-33925421 | None:intergenic | 25.0% |
| !! | AAAAAATCTGAAACAAACCA+AGG | - | chr2_3:33925403-33925422 | None:intergenic | 25.0% |
| ! | TCAAACAAAATGGATGTATT+TGG | + | chr2_3:33925808-33925827 | Msa0288570:intron | 25.0% |
| !! | GATGTATTTGGTTCAAAATT+TGG | + | chr2_3:33925820-33925839 | Msa0288570:intron | 25.0% |
| !!! | TCAAAGAAAGTTGATGTATT+TGG | - | chr2_3:33925847-33925866 | None:intergenic | 25.0% |
| !! | CTTTTGCGTATATTTTGTAA+CGG | + | chr2_3:33925871-33925890 | Msa0288570:intron | 25.0% |
| ! | GAAGTATATCATATCATCTA+AGG | + | chr2_3:33925896-33925915 | Msa0288570:intron | 25.0% |
| ! | TCTATATCTCAACTATAATG+AGG | + | chr2_3:33926006-33926025 | Msa0288570:intron | 25.0% |
| !! | GATCTAAAACAACACATTTA+TGG | - | chr2_3:33926036-33926055 | None:intergenic | 25.0% |
| ! | CATGAATCATATATTGAAAC+TGG | - | chr2_3:33926058-33926077 | None:intergenic | 25.0% |
| ! | CAGTTTCAATATATGATTCA+TGG | + | chr2_3:33926056-33926075 | Msa0288570:intron | 25.0% |
| ! | CATCAAAATTTGGAGATAAA+AGG | - | chr2_3:33926251-33926270 | None:intergenic | 25.0% |
| !!! | TTTATCTCCAAATTTTGATG+TGG | + | chr2_3:33926251-33926270 | Msa0288570:intron | 25.0% |
| !!! | ATTTTTTTTTAAACCCACCA+CGG | + | chr2_3:33926729-33926748 | Msa0288570:intron | 25.0% |
| !!! | ATGTTTTATTTTGTTGTGTC+TGG | + | chr2_3:33926808-33926827 | Msa0288570:intron | 25.0% |
| !!! | TGTTTTATTTTGTTGTGTCT+GGG | + | chr2_3:33926809-33926828 | Msa0288570:intron | 25.0% |
| ! | TGTATTTCGAAAACTTAAAC+TGG | - | chr2_3:33926878-33926897 | None:intergenic | 25.0% |
| ! | AGATAACATGACATAATTTG+TGG | + | chr2_3:33927135-33927154 | Msa0288570:intron | 25.0% |
| ! | ATCCATTGTGGATATATTAT+AGG | + | chr2_3:33927218-33927237 | Msa0288570:intron | 25.0% |
| ! | TAGAGATGAATTCTGTTAAT+TGG | + | chr2_3:33927267-33927286 | Msa0288570:intron | 25.0% |
| ! | AGAGATGAATTCTGTTAATT+GGG | + | chr2_3:33927268-33927287 | Msa0288570:intron | 25.0% |
| !!! | GAAAATATTAAAAGTACCCT+TGG | + | chr2_3:33927332-33927351 | Msa0288570:intron | 25.0% |
| !! | CTTTCTGAATACTGTTTTAT+GGG | - | chr2_3:33927587-33927606 | None:intergenic | 25.0% |
| ! | TTTATGATTTATGGATCTCT+GGG | + | chr2_3:33927679-33927698 | Msa0288570:intron | 25.0% |
| !! | AAAGTTAGTTCTCTAAACTT+TGG | - | chr2_3:33928123-33928142 | None:intergenic | 25.0% |
| ! | AAGTTTAGAGAACTAACTTT+AGG | + | chr2_3:33928123-33928142 | Msa0288570:exon | 25.0% |
| ! | AGTTTAGAGAACTAACTTTA+GGG | + | chr2_3:33928124-33928143 | Msa0288570:exon | 25.0% |
| !!! | TCTTTATTTTCTTGAAGCAT+AGG | + | chr2_3:33928147-33928166 | Msa0288570:three_prime_UTR | 25.0% |
| GAATTTGAGGATGAGAAAAA+AGG | - | chr2_3:33924897-33924916 | None:intergenic | 30.0% | |
| TTCTCATCCTCAAATTCAAT+CGG | + | chr2_3:33924900-33924919 | Msa0288570:five_prime_UTR | 30.0% | |
| GATTTAGCAACAATATCCAT+AGG | - | chr2_3:33925043-33925062 | None:intergenic | 30.0% | |
| GGATATTGTTGCTAAATCAA+AGG | + | chr2_3:33925045-33925064 | Msa0288570:CDS | 30.0% | |
| TAGTGATTAATAATTGCCCT+TGG | + | chr2_3:33925383-33925402 | Msa0288570:intron | 30.0% | |
| !! | AAGCCATAATTGATTTTGTG+CGG | + | chr2_3:33925458-33925477 | Msa0288570:intron | 30.0% |
| TTATGAACACCACCAAAAAT+CGG | - | chr2_3:33925522-33925541 | None:intergenic | 30.0% | |
| !!! | TTTTGGTGGTGTTCATAATT+CGG | + | chr2_3:33925524-33925543 | Msa0288570:intron | 30.0% |
| ATTGATCTCAAAACATGTGA+CGG | - | chr2_3:33925667-33925686 | None:intergenic | 30.0% | |
| ! | CATATCATCTAAGGTGTAAA+TGG | + | chr2_3:33925905-33925924 | Msa0288570:intron | 30.0% |
| AAATGAAGTATGTAACAGAG+AGG | + | chr2_3:33926160-33926179 | Msa0288570:CDS | 30.0% | |
| AGCATGTATTGAAAGCTTTA+GGG | + | chr2_3:33926204-33926223 | Msa0288570:CDS | 30.0% | |
| AATTTGGAGATAAAAGGGTT+TGG | - | chr2_3:33926245-33926264 | None:intergenic | 30.0% | |
| AAAGGATCCACATCAAAATT+TGG | - | chr2_3:33926261-33926280 | None:intergenic | 30.0% | |
| ! | TGATTTGTATCTTTCTCATG+TGG | + | chr2_3:33926337-33926356 | Msa0288570:intron | 30.0% |
| CAAGAATAACACCATTGAAA+AGG | - | chr2_3:33926365-33926384 | None:intergenic | 30.0% | |
| ! | TTTTTCTCTGCATTGTAGTT+AGG | + | chr2_3:33926386-33926405 | Msa0288570:intron | 30.0% |
| TGCATTGTAGTTAGGTTTAA+TGG | + | chr2_3:33926394-33926413 | Msa0288570:intron | 30.0% | |
| ! | TAGATTAGCTAGTATCCTTT+AGG | + | chr2_3:33926434-33926453 | Msa0288570:intron | 30.0% |
| ! | AGATTAGCTAGTATCCTTTA+GGG | + | chr2_3:33926435-33926454 | Msa0288570:intron | 30.0% |
| ATCTTAATGATACGATGTAG+CGG | + | chr2_3:33926489-33926508 | Msa0288570:intron | 30.0% | |
| ! | TTTAAAATAAAGGGAGGGAA+AGG | + | chr2_3:33926583-33926602 | Msa0288570:intron | 30.0% |
| ACGAATGCTTATATAACACA+AGG | - | chr2_3:33926915-33926934 | None:intergenic | 30.0% | |
| ATATATCAGGTTCTTGGATT+TGG | + | chr2_3:33927003-33927022 | Msa0288570:intron | 30.0% | |
| TGCCTATAATATATCCACAA+TGG | - | chr2_3:33927223-33927242 | None:intergenic | 30.0% | |
| ATTCATCTCTAACAATGCAA+GGG | - | chr2_3:33927258-33927277 | None:intergenic | 30.0% | |
| AATTCATCTCTAACAATGCA+AGG | - | chr2_3:33927259-33927278 | None:intergenic | 30.0% | |
| !! | ATCAGATAAAAGCATTGAAC+TGG | - | chr2_3:33927362-33927381 | None:intergenic | 30.0% |
| !!! | AATGCTGTTTTAACCAGTTT+AGG | + | chr2_3:33927450-33927469 | Msa0288570:intron | 30.0% |
| ! | GCTTTCTGAATACTGTTTTA+TGG | - | chr2_3:33927588-33927607 | None:intergenic | 30.0% |
| TATTCAGAAAGCAAATAGAC+TGG | + | chr2_3:33927596-33927615 | Msa0288570:intron | 30.0% | |
| CTTTATGATTTATGGATCTC+TGG | + | chr2_3:33927678-33927697 | Msa0288570:intron | 30.0% | |
| ! | CAGTTCAATTCTGTTGTTTA+TGG | + | chr2_3:33927906-33927925 | Msa0288570:intron | 30.0% |
| ! | TGTTGTTTATGGATTGACTT+TGG | + | chr2_3:33927917-33927936 | Msa0288570:intron | 30.0% |
| ATCACTAACAGAACACAAAT+GGG | - | chr2_3:33928262-33928281 | None:intergenic | 30.0% | |
| TATCACTAACAGAACACAAA+TGG | - | chr2_3:33928263-33928282 | None:intergenic | 30.0% | |
| AAGAGAAGATGAAGAGATGA+GGG | - | chr2_3:33924786-33924805 | None:intergenic | 35.0% | |
| AAAGAGAAGATGAAGAGATG+AGG | - | chr2_3:33924787-33924806 | None:intergenic | 35.0% | |
| ATTGAATTTGAAGATCTGGG+AGG | - | chr2_3:33924853-33924872 | None:intergenic | 35.0% | |
| TAATACAAAGATGGAGCCTA+TGG | + | chr2_3:33925024-33925043 | Msa0288570:exon | 35.0% | |
| AATTGAATGTTGTGTAGGTC+AGG | + | chr2_3:33925262-33925281 | Msa0288570:intron | 35.0% | |
| !! | TATGGTGTTATCACCTATGT+TGG | - | chr2_3:33925484-33925503 | None:intergenic | 35.0% |
| !!! | TTATCGCATTTGCCGATTTT+TGG | + | chr2_3:33925507-33925526 | Msa0288570:intron | 35.0% |
| TTGATCTCAAAACATGTGAC+GGG | - | chr2_3:33925666-33925685 | None:intergenic | 35.0% | |
| ! | TCTTGATTTGAAGCCGATAA+AGG | + | chr2_3:33925737-33925756 | Msa0288570:intron | 35.0% |
| GTCATTAGGTCAACCTTTAT+CGG | - | chr2_3:33925753-33925772 | None:intergenic | 35.0% | |
| ! | GAAAATGTAAGCAAAAGTGC+AGG | + | chr2_3:33925785-33925804 | Msa0288570:intron | 35.0% |
| AAAGTGCAGGTCAAACAAAA+TGG | + | chr2_3:33925798-33925817 | Msa0288570:intron | 35.0% | |
| ! | TTGCGTATATTTTGTAACGG+AGG | + | chr2_3:33925874-33925893 | Msa0288570:intron | 35.0% |
| TATGTAACAGAGAGGAAAGA+AGG | + | chr2_3:33926168-33926187 | Msa0288570:CDS | 35.0% | |
| AAAGCTTTCAATACATGCTC+AGG | - | chr2_3:33926203-33926222 | None:intergenic | 35.0% | |
| GAGCATGTATTGAAAGCTTT+AGG | + | chr2_3:33926203-33926222 | Msa0288570:CDS | 35.0% | |
| ! | GCATGTATTGAAAGCTTTAG+GGG | + | chr2_3:33926205-33926224 | Msa0288570:CDS | 35.0% |
| TAGTTAATATGGCTCCCTAA+AGG | - | chr2_3:33926452-33926471 | None:intergenic | 35.0% | |
| AACACCTAAATGCAAAGAGT+GGG | - | chr2_3:33926555-33926574 | None:intergenic | 35.0% | |
| AAACACCTAAATGCAAAGAG+TGG | - | chr2_3:33926556-33926575 | None:intergenic | 35.0% | |
| ATGTTGTTAATGCACCTAGA+GGG | - | chr2_3:33926642-33926661 | None:intergenic | 35.0% | |
| TATGTTGTTAATGCACCTAG+AGG | - | chr2_3:33926643-33926662 | None:intergenic | 35.0% | |
| AACAACATACTAATCCCTCT+AGG | + | chr2_3:33926654-33926673 | Msa0288570:intron | 35.0% | |
| CAAGCAATTCAAAATGCACA+TGG | - | chr2_3:33927106-33927125 | None:intergenic | 35.0% | |
| TGAGAGGTCTTTGTATCTTA+AGG | - | chr2_3:33927177-33927196 | None:intergenic | 35.0% | |
| TACAAAGACCTCTCAATTTG+AGG | + | chr2_3:33927182-33927201 | Msa0288570:intron | 35.0% | |
| GTGGATATATTATAGGCACT+AGG | + | chr2_3:33927225-33927244 | Msa0288570:intron | 35.0% | |
| TAGGATCTATGTCTGTCTAA+GGG | + | chr2_3:33927416-33927435 | Msa0288570:intron | 35.0% | |
| TACAATATGGGAACCTAAAC+TGG | - | chr2_3:33927466-33927485 | None:intergenic | 35.0% | |
| TTCCCATATTGTAAGCAACT+TGG | + | chr2_3:33927473-33927492 | Msa0288570:CDS | 35.0% | |
| TGCCAAGTTGCTTACAATAT+GGG | - | chr2_3:33927478-33927497 | None:intergenic | 35.0% | |
| ATGCCAAGTTGCTTACAATA+TGG | - | chr2_3:33927479-33927498 | None:intergenic | 35.0% | |
| TTGGCATAAATTATGTCCTG+TGG | + | chr2_3:33927492-33927511 | Msa0288570:CDS | 35.0% | |
| TGGCATAAATTATGTCCTGT+GGG | + | chr2_3:33927493-33927512 | Msa0288570:CDS | 35.0% | |
| GTGATCATATCCATTGTAGA+AGG | + | chr2_3:33927560-33927579 | Msa0288570:intron | 35.0% | |
| ! | TTTTATGGGTCCTTCTACAA+TGG | - | chr2_3:33927573-33927592 | None:intergenic | 35.0% |
| ! | TTTTATAGAGTCTTGCTGCA+GGG | - | chr2_3:33927972-33927991 | None:intergenic | 35.0% |
| ATCTGGTTGATTGGAAGTAA+CGG | - | chr2_3:33928095-33928114 | None:intergenic | 35.0% | |
| TCACTAACAGAACACAAATG+GGG | - | chr2_3:33928261-33928280 | None:intergenic | 35.0% | |
| GAACACTCTTTCTCGTTGTT+TGG | + | chr2_3:33924722-33924741 | Msa0288570:five_prime_UTR | 40.0% | |
| TACGTACTGGATGGATAAGA+AGG | - | chr2_3:33924750-33924769 | None:intergenic | 40.0% | |
| ! | TGATGCTTTTACGTACTGGA+TGG | - | chr2_3:33924759-33924778 | None:intergenic | 40.0% |
| !!! | TTGGTGATGCTTTTACGTAC+TGG | - | chr2_3:33924763-33924782 | None:intergenic | 40.0% |
| ! | AGACTCACCGATTGAATTTG+AGG | - | chr2_3:33924910-33924929 | None:intergenic | 40.0% |
| TGGCCGCACAAAATCAATTA+TGG | - | chr2_3:33925464-33925483 | None:intergenic | 40.0% | |
| CGGCAAATGCGATAAACTTA+TGG | - | chr2_3:33925502-33925521 | None:intergenic | 40.0% | |
| ! | GCTTACATTTTCGTAACCGA+GGG | - | chr2_3:33925777-33925796 | None:intergenic | 40.0% |
| ! | TGCTTACATTTTCGTAACCG+AGG | - | chr2_3:33925778-33925797 | None:intergenic | 40.0% |
| TATATTATTTGCCCTCCCCT+TGG | + | chr2_3:33926301-33926320 | Msa0288570:intron | 40.0% | |
| TCAATGCACAGAACTTCCAA+GGG | - | chr2_3:33926320-33926339 | None:intergenic | 40.0% | |
| ATCAATGCACAGAACTTCCA+AGG | - | chr2_3:33926321-33926340 | None:intergenic | 40.0% | |
| ! | CTCATGTGGATCCTTTTCAA+TGG | + | chr2_3:33926351-33926370 | Msa0288570:intron | 40.0% |
| GAATCCCACTCTTTGCATTT+AGG | + | chr2_3:33926548-33926567 | Msa0288570:intron | 40.0% | |
| TGTTGTTAATGCACCTAGAG+GGG | - | chr2_3:33926641-33926660 | None:intergenic | 40.0% | |
| TTGACTATGATGCACCTAGA+GGG | - | chr2_3:33926671-33926690 | None:intergenic | 40.0% | |
| ATTGACTATGATGCACCTAG+AGG | - | chr2_3:33926672-33926691 | None:intergenic | 40.0% | |
| !!! | TTTTTTTAAACCCACCACGG+AGG | + | chr2_3:33926732-33926751 | Msa0288570:intron | 40.0% |
| AGCATATGAACAGCACAAGA+TGG | + | chr2_3:33927050-33927069 | Msa0288570:CDS | 40.0% | |
| ! | ATGACATAATTTGTGGCCTG+TGG | + | chr2_3:33927142-33927161 | Msa0288570:intron | 40.0% |
| ! | TGACATAATTTGTGGCCTGT+GGG | + | chr2_3:33927143-33927162 | Msa0288570:intron | 40.0% |
| CTAGTGGAAGCTGAATTTCT+AGG | + | chr2_3:33927397-33927416 | Msa0288570:intron | 40.0% | |
| CTAGGATCTATGTCTGTCTA+AGG | + | chr2_3:33927415-33927434 | Msa0288570:intron | 40.0% | |
| TAAATTATGTCCTGTGGGCA+AGG | + | chr2_3:33927498-33927517 | Msa0288570:CDS | 40.0% | |
| TGAGAGGTCTCTGTATCTTT+AGG | - | chr2_3:33927527-33927546 | None:intergenic | 40.0% | |
| AGAAAGCAAATAGACTGGAC+AGG | + | chr2_3:33927601-33927620 | Msa0288570:intron | 40.0% | |
| CAATCAAAGAACCCACAGTA+AGG | - | chr2_3:33927645-33927664 | None:intergenic | 40.0% | |
| CTTACTGTGGGTTCTTTGAT+TGG | + | chr2_3:33927643-33927662 | Msa0288570:intron | 40.0% | |
| ! | CTTTTATAGAGTCTTGCTGC+AGG | - | chr2_3:33927973-33927992 | None:intergenic | 40.0% |
| CTGCAGCAAGACTCTATAAA+AGG | + | chr2_3:33927971-33927990 | Msa0288570:intron | 40.0% | |
| !! | ACTCTATAAAAGGTGCCAAG+TGG | + | chr2_3:33927981-33928000 | Msa0288570:CDS | 40.0% |
| TCTAAACTTTGGTCAGCATC+TGG | - | chr2_3:33928112-33928131 | None:intergenic | 40.0% | |
| AATCGAGCTAAATTACCCAC+AGG | - | chr2_3:33928192-33928211 | None:intergenic | 40.0% | |
| AAACTCATTCACTACTGTGC+TGG | + | chr2_3:33928219-33928238 | Msa0288570:three_prime_UTR | 40.0% | |
| GAAGATGAAGAGATGAGGGT+TGG | - | chr2_3:33924782-33924801 | None:intergenic | 45.0% | |
| GAAGATGCTTCGCTACCTAA+AGG | + | chr2_3:33925067-33925086 | Msa0288570:CDS | 45.0% | |
| ! | TGATTTTGTGCGGCCAACAT+AGG | + | chr2_3:33925468-33925487 | Msa0288570:intron | 45.0% |
| !!! | TCGCATTTGCCGATTTTTGG+TGG | + | chr2_3:33925510-33925529 | Msa0288570:intron | 45.0% |
| CTTCTTGTTCCTGGAAGACA+CGG | + | chr2_3:33925711-33925730 | Msa0288570:intron | 45.0% | |
| CATTTGACTCTGATGAGACG+AGG | - | chr2_3:33926145-33926164 | None:intergenic | 45.0% | |
| CAATGCACAGAACTTCCAAG+GGG | - | chr2_3:33926319-33926338 | None:intergenic | 45.0% | |
| TTTAATGGCCATCTGTGCAG+TGG | + | chr2_3:33926409-33926428 | Msa0288570:intron | 45.0% | |
| ACAAACACTATTGCGAGAGC+AGG | + | chr2_3:33926520-33926539 | Msa0288570:intron | 45.0% | |
| CAAACACTATTGCGAGAGCA+GGG | + | chr2_3:33926521-33926540 | Msa0288570:intron | 45.0% | |
| AGTCAATCATGAACCCCTCT+AGG | + | chr2_3:33926625-33926644 | Msa0288570:intron | 45.0% | |
| AGTCAATCATGAACCCCTCT+AGG | + | chr2_3:33926625-33926644 | Msa0288570:intron | 45.0% | |
| CATTCTGAATGCACCTAGAG+GGG | - | chr2_3:33926701-33926720 | None:intergenic | 45.0% | |
| CCATTCTGAATGCACCTAGA+GGG | - | chr2_3:33926702-33926721 | None:intergenic | 45.0% | |
| TGGATTTGGCGAGTACATTG+AGG | + | chr2_3:33927017-33927036 | Msa0288570:CDS | 45.0% | |
| ! | ACCTCTCAATTTGAGGTCCA+GGG | + | chr2_3:33927189-33927208 | Msa0288570:intron | 45.0% |
| ! | GCATTGAACTGGTTCACCAA+GGG | - | chr2_3:33927351-33927370 | None:intergenic | 45.0% |
| ! | AGCATTGAACTGGTTCACCA+AGG | - | chr2_3:33927352-33927371 | None:intergenic | 45.0% |
| GTAAGGTTAAGCCGCTCATT+AGG | - | chr2_3:33927628-33927647 | None:intergenic | 45.0% | |
| ! | TGGATCTCTGGGAGTTTGTA+TGG | + | chr2_3:33927690-33927709 | Msa0288570:intron | 45.0% |
| ! | ATATGAGCCCTGCTGCTTAT+GGG | - | chr2_3:33927851-33927870 | None:intergenic | 45.0% |
| ! | AATATGAGCCCTGCTGCTTA+TGG | - | chr2_3:33927852-33927871 | None:intergenic | 45.0% |
| !! | ATAAAAGGTGCCAAGTGGAG+CGG | + | chr2_3:33927986-33928005 | Msa0288570:CDS | 45.0% |
| CTCTGCTAATGCTTGTTCCT+CGG | - | chr2_3:33928026-33928045 | None:intergenic | 45.0% | |
| AAGCATTAGCAGAGCAGCAA+AGG | + | chr2_3:33928032-33928051 | Msa0288570:CDS | 45.0% | |
| CACGTGCTAGAATGAATGGA+GGG | + | chr2_3:33928068-33928087 | Msa0288570:CDS | 45.0% | |
| TTGGTCAGCATCTGGTTGAT+TGG | - | chr2_3:33928104-33928123 | None:intergenic | 45.0% | |
| CATCTCTGACTCTTACCTGT+GGG | + | chr2_3:33928174-33928193 | Msa0288570:three_prime_UTR | 45.0% | |
| ! | AATGGGGAGCACATCTACAT+AGG | - | chr2_3:33928245-33928264 | None:intergenic | 45.0% |
| !!! | TTTTATTTTTTTTAATTTGA+TGG | + | chr2_3:33925294-33925313 | Msa0288570:intron | 5.0% |
| !! | TAATTATAATAAACTATAAT+AGG | - | chr2_3:33928440-33928459 | None:intergenic | 5.0% |
| TCTCTTGCAACACGGACATC+AGG | - | chr2_3:33925227-33925246 | None:intergenic | 50.0% | |
| CCTGGGTATCTCTTGCAACA+CGG | - | chr2_3:33925235-33925254 | None:intergenic | 50.0% | |
| !! | TCTCAAAACATGTGACGGGC+AGG | - | chr2_3:33925662-33925681 | None:intergenic | 50.0% |
| TGCTAGTCGCTTCTTGTTCC+TGG | + | chr2_3:33925702-33925721 | Msa0288570:intron | 50.0% | |
| TCAAGACATCCGTGTCTTCC+AGG | - | chr2_3:33925723-33925742 | None:intergenic | 50.0% | |
| GGTTGACCTAATGACTCCCT+CGG | + | chr2_3:33925758-33925777 | Msa0288570:intron | 50.0% | |
| TCGTAACCGAGGGAGTCATT+AGG | - | chr2_3:33925767-33925786 | None:intergenic | 50.0% | |
| AATCTACGCCACTGCACAGA+TGG | - | chr2_3:33926420-33926439 | None:intergenic | 50.0% | |
| CCCTCTAGGTGCATTCAGAA+TGG | + | chr2_3:33926699-33926718 | Msa0288570:intron | 50.0% | |
| GCCATTCTGAATGCACCTAG+AGG | - | chr2_3:33926703-33926722 | None:intergenic | 50.0% | |
| AATTGTCAATGGTGCCTCCG+TGG | - | chr2_3:33926749-33926768 | None:intergenic | 50.0% | |
| ACAGCACAAGATGGAGACAG+TGG | + | chr2_3:33927059-33927078 | Msa0288570:CDS | 50.0% | |
| ! | TAATTTGTGGCCTGTGGGCA+TGG | + | chr2_3:33927148-33927167 | Msa0288570:intron | 50.0% |
| ! | GACCTCTCAATTTGAGGTCC+AGG | + | chr2_3:33927188-33927207 | Msa0288570:intron | 50.0% |
| ! | CCTCTCAATTTGAGGTCCAG+GGG | + | chr2_3:33927190-33927209 | Msa0288570:intron | 50.0% |
| CCACAATGGATATGATCCCC+TGG | - | chr2_3:33927209-33927228 | None:intergenic | 50.0% | |
| CCAGGGGATCATATCCATTG+TGG | + | chr2_3:33927206-33927225 | Msa0288570:intron | 50.0% | |
| TACAGAGACCTCTCAGTGTG+AGG | + | chr2_3:33927532-33927551 | Msa0288570:CDS | 50.0% | |
| ACTGGACAGGTCCTAATGAG+CGG | + | chr2_3:33927614-33927633 | Msa0288570:intron | 50.0% | |
| TGAGCGGCTTAACCTTACTG+TGG | + | chr2_3:33927630-33927649 | Msa0288570:intron | 50.0% | |
| GAGCGGCTTAACCTTACTGT+GGG | + | chr2_3:33927631-33927650 | Msa0288570:intron | 50.0% | |
| AGTGATGAGCATGCACACAC+AGG | + | chr2_3:33927787-33927806 | Msa0288570:intron | 50.0% | |
| GTGATGAGCATGCACACACA+GGG | + | chr2_3:33927788-33927807 | Msa0288570:intron | 50.0% | |
| GCAGCAAAGGATGTTTGCAG+AGG | + | chr2_3:33928045-33928064 | Msa0288570:CDS | 50.0% | |
| GAGGCACGTGCTAGAATGAA+TGG | + | chr2_3:33928064-33928083 | Msa0288570:CDS | 50.0% | |
| GCACGTGCTAGAATGAATGG+AGG | + | chr2_3:33928067-33928086 | Msa0288570:CDS | 50.0% | |
| GCATCTCTGACTCTTACCTG+TGG | + | chr2_3:33928173-33928192 | Msa0288570:three_prime_UTR | 50.0% | |
| CTTGCAACACGGACATCAGG+TGG | - | chr2_3:33925224-33925243 | None:intergenic | 55.0% | |
| CCGTGTTGCAAGAGATACCC+AGG | + | chr2_3:33925232-33925251 | Msa0288570:CDS | 55.0% | |
| CAGGAAACCACACGGCACAA+GGG | - | chr2_3:33925643-33925662 | None:intergenic | 55.0% | |
| GCACAGAACTTCCAAGGGGA+GGG | - | chr2_3:33926315-33926334 | None:intergenic | 55.0% | |
| TGCACAGAACTTCCAAGGGG+AGG | - | chr2_3:33926316-33926335 | None:intergenic | 55.0% | |
| CCCCTGGACCTCAAATTGAG+AGG | - | chr2_3:33927193-33927212 | None:intergenic | 55.0% | |
| !! | CTTTAGGTTGCCTTGCCCAC+AGG | - | chr2_3:33927511-33927530 | None:intergenic | 55.0% |
| GACCTCTCAGTGTGAGGTCA+AGG | + | chr2_3:33927538-33927557 | Msa0288570:CDS | 55.0% | |
| CACCTTGACCTCACACTGAG+AGG | - | chr2_3:33927543-33927562 | None:intergenic | 55.0% | |
| GGATTGCGGCTCTCAAGCAT+TGG | - | chr2_3:33927830-33927849 | None:intergenic | 55.0% | |
| ! | CCCTGCTGCTTATGGGATTG+CGG | - | chr2_3:33927844-33927863 | None:intergenic | 55.0% |
| CCGCAATCCCATAAGCAGCA+GGG | + | chr2_3:33927841-33927860 | Msa0288570:intron | 55.0% | |
| ACGATGACCCTTGTGCCGTG+TGG | + | chr2_3:33925633-33925652 | Msa0288570:intron | 60.0% | |
| GCAGGAAACCACACGGCACA+AGG | - | chr2_3:33925644-33925663 | None:intergenic | 60.0% | |
| !! | GTGACGGGCAGGAAACCACA+CGG | - | chr2_3:33925651-33925670 | None:intergenic | 60.0% |
| GTCAATGGTGCCTCCGTGGT+GGG | - | chr2_3:33926745-33926764 | None:intergenic | 60.0% | |
| TGTCAATGGTGCCTCCGTGG+TGG | - | chr2_3:33926746-33926765 | None:intergenic | 60.0% | |
| CTTAAGGCTGCCATGCCCAC+AGG | - | chr2_3:33927161-33927180 | None:intergenic | 60.0% | |
| GCCGCAATCCCATAAGCAGC+AGG | + | chr2_3:33927840-33927859 | Msa0288570:intron | 60.0% | |
| CTCAGCTGCACCGCTCCACT+TGG | - | chr2_3:33927999-33928018 | None:intergenic | 65.0% | |
| CGGTGCAGCTGAGATGACCG+AGG | + | chr2_3:33928006-33928025 | Msa0288570:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 33924667 | 33928473 | 33924667 | ID=Msa0288570;Name=Msa0288570 |
| chr2_3 | mRNA | 33924667 | 33928473 | 33924667 | ID=Msa0288570-mRNA-1;Parent=Msa0288570;Name=Msa0288570-mRNA-1;_AED=0.06;_eAED=0.06;_QI=279|0.66|0.85|0.85|0.83|0.85|7|335|187 |
| chr2_3 | exon | 33924667 | 33924921 | 33924667 | ID=Msa0288570-mRNA-1:exon:11122;Parent=Msa0288570-mRNA-1 |
| chr2_3 | exon | 33925010 | 33925088 | 33925010 | ID=Msa0288570-mRNA-1:exon:11123;Parent=Msa0288570-mRNA-1 |
| chr2_3 | exon | 33925189 | 33925278 | 33925189 | ID=Msa0288570-mRNA-1:exon:11124;Parent=Msa0288570-mRNA-1 |
| chr2_3 | exon | 33926132 | 33926226 | 33926132 | ID=Msa0288570-mRNA-1:exon:11125;Parent=Msa0288570-mRNA-1 |
| chr2_3 | exon | 33927012 | 33927080 | 33927012 | ID=Msa0288570-mRNA-1:exon:11126;Parent=Msa0288570-mRNA-1 |
| chr2_3 | exon | 33927467 | 33927559 | 33927467 | ID=Msa0288570-mRNA-1:exon:11127;Parent=Msa0288570-mRNA-1 |
| chr2_3 | exon | 33927977 | 33928473 | 33927977 | ID=Msa0288570-mRNA-1:exon:11128;Parent=Msa0288570-mRNA-1 |
| chr2_3 | five_prime_UTR | 33924667 | 33924921 | 33924667 | ID=Msa0288570-mRNA-1:five_prime_utr;Parent=Msa0288570-mRNA-1 |
| chr2_3 | five_prime_UTR | 33925010 | 33925033 | 33925010 | ID=Msa0288570-mRNA-1:five_prime_utr;Parent=Msa0288570-mRNA-1 |
| chr2_3 | CDS | 33925034 | 33925088 | 33925034 | ID=Msa0288570-mRNA-1:cds;Parent=Msa0288570-mRNA-1 |
| chr2_3 | CDS | 33925189 | 33925278 | 33925189 | ID=Msa0288570-mRNA-1:cds;Parent=Msa0288570-mRNA-1 |
| chr2_3 | CDS | 33926132 | 33926226 | 33926132 | ID=Msa0288570-mRNA-1:cds;Parent=Msa0288570-mRNA-1 |
| chr2_3 | CDS | 33927012 | 33927080 | 33927012 | ID=Msa0288570-mRNA-1:cds;Parent=Msa0288570-mRNA-1 |
| chr2_3 | CDS | 33927467 | 33927559 | 33927467 | ID=Msa0288570-mRNA-1:cds;Parent=Msa0288570-mRNA-1 |
| chr2_3 | CDS | 33927977 | 33928138 | 33927977 | ID=Msa0288570-mRNA-1:cds;Parent=Msa0288570-mRNA-1 |
| chr2_3 | three_prime_UTR | 33928139 | 33928473 | 33928139 | ID=Msa0288570-mRNA-1:three_prime_utr;Parent=Msa0288570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
