Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0292800 | KEH38463.1 | 89.825 | 285 | 0 | 2 | 52 | 307 | 1 | 285 | 2.44e-180 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0292800 | sp|Q9C8L4|ETHE1_ARATH | 75.105 | 237 | 30 | 2 | 96 | 303 | 51 | 287 | 2.94e-127 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0292800 | A0A072VAN8 | 89.825 | 285 | 0 | 2 | 52 | 307 | 1 | 285 | 1.17e-180 | 509 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0213450 | Msa0292800 | 0.861603 | 9.133675e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0292800 | MtrunA17_Chr2g0313641 | 87.109 | 256 | 4 | 2 | 52 | 278 | 1 | 256 | 2.82e-156 | 437 |
| Msa0292800 | MtrunA17_Chr2g0313651 | 97.222 | 36 | 1 | 0 | 272 | 307 | 7 | 42 | 4.42e-18 | 76.3 |
| Msa0292800 | MtrunA17_Chr5g0428611 | 35.057 | 174 | 76 | 9 | 107 | 250 | 10 | 176 | 2.70e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0292800 | AT1G53580.1 | 75.105 | 237 | 30 | 2 | 96 | 303 | 51 | 287 | 2.99e-128 | 367 |
| Msa0292800 | AT1G53580.2 | 74.684 | 237 | 31 | 2 | 96 | 303 | 51 | 287 | 3.28e-127 | 365 |
| Msa0292800 | AT3G10850.1 | 31.609 | 174 | 82 | 9 | 107 | 250 | 10 | 176 | 1.66e-13 | 69.7 |
Find 80 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAATAAATTGATGATTAT+TGG | 0.175380 | 2_3:+42418398 | Msa0292800:three_prime_UTR |
| TTCCGCATCCGCGTATTAAT+AGG | 0.246314 | 2_3:-42417056 | None:intergenic |
| CAAATCCAAATTGGTTGTTA+TGG | 0.249284 | 2_3:-42413970 | None:intergenic |
| CGTAGCTGTTCCGGCTAATA+TGG | 0.251521 | 2_3:+42418223 | Msa0292800:CDS |
| TGATCCCATAACAACCAATT+TGG | 0.257469 | 2_3:+42413965 | Msa0292800:five_prime_UTR |
| GGTTGCCTTACCTATGTTAC+AGG | 0.275678 | 2_3:+42416985 | Msa0292800:CDS |
| CTTATCACTAATTCAAGAAT+TGG | 0.276956 | 2_3:+42414797 | Msa0292800:CDS |
| GGCCTGTGTTCTGTTATATT+TGG | 0.294184 | 2_3:+42418433 | Msa0292800:three_prime_UTR |
| GTTGAAAGCTCAGCTTGTTT+TGG | 0.295459 | 2_3:-42418261 | None:intergenic |
| TAATGGAATGATGAATTCTA+TGG | 0.310659 | 2_3:-42414065 | None:intergenic |
| AATGATCGACGTAGCTGTTC+CGG | 0.311682 | 2_3:+42418214 | Msa0292800:CDS |
| TGGAGTTAATAGGATATATA+CGG | 0.314221 | 2_3:+42418508 | Msa0292800:three_prime_UTR |
| AAATCCAAATTGGTTGTTAT+GGG | 0.328743 | 2_3:-42413969 | None:intergenic |
| AATCAATATCAAATCCAAAT+TGG | 0.336310 | 2_3:-42413979 | None:intergenic |
| CTATCTACTGTCCTATCAAC+AGG | 0.367153 | 2_3:-42414771 | None:intergenic |
| TCCGCATCCGCGTATTAATA+GGG | 0.378582 | 2_3:-42417055 | None:intergenic |
| AGTTGATTGACCCTGTTGAT+AGG | 0.384510 | 2_3:+42414760 | Msa0292800:intron |
| GTACATGCTGATCATGTTAC+TGG | 0.385443 | 2_3:+42414852 | Msa0292800:CDS |
| GGATAGAGTAAGGTATCTTT+AGG | 0.405587 | 2_3:-42417477 | None:intergenic |
| TTGATGATTATTGGCCTCAA+TGG | 0.421362 | 2_3:+42418407 | Msa0292800:three_prime_UTR |
| TTATGTTAACTTACAACTGC+TGG | 0.424997 | 2_3:-42414397 | None:intergenic |
| GCTGATCATGTTACTGGAAC+TGG | 0.430726 | 2_3:+42414858 | Msa0292800:CDS |
| AAATCAGTTACTTGAAATGC+TGG | 0.434716 | 2_3:+42418545 | Msa0292800:three_prime_UTR |
| AATGACGATGTTGTTGATGT+TGG | 0.435584 | 2_3:-42414107 | None:intergenic |
| TTATCACTAATTCAAGAATT+GGG | 0.439124 | 2_3:+42414798 | Msa0292800:CDS |
| AAATATTAGAGAATAGAGAT+AGG | 0.453733 | 2_3:-42414150 | None:intergenic |
| TGTGTCTGTGAATATAATAA+TGG | 0.457573 | 2_3:-42414082 | None:intergenic |
| CTGTAGGTTCGCGCAACTCC+CGG | 0.460561 | 2_3:+42416952 | Msa0292800:intron |
| GTTCCGGCTAATATGGTTTG+TGG | 0.461267 | 2_3:+42418230 | Msa0292800:CDS |
| GCAACTCCCGGTCATACCTT+AGG | 0.461527 | 2_3:+42416964 | Msa0292800:CDS |
| GTGAATGCCATTCGAGGTTG+AGG | 0.467892 | 2_3:-42417024 | None:intergenic |
| ATGACGATGTTGTTGATGTT+GGG | 0.479986 | 2_3:-42414106 | None:intergenic |
| TATATACGGAAATAACTAGT+TGG | 0.481323 | 2_3:+42418522 | Msa0292800:three_prime_UTR |
| ATTCGAGGTTGAGGTTGGTC+AGG | 0.482034 | 2_3:-42417015 | None:intergenic |
| AATTAAGCTCAAATCACAAA+TGG | 0.484321 | 2_3:+42414264 | Msa0292800:CDS |
| AGGTCCATCTCCTGTAACAT+AGG | 0.489230 | 2_3:-42416995 | None:intergenic |
| GTCATGAGCTGGATAGAGTA+AGG | 0.518190 | 2_3:-42417487 | None:intergenic |
| CATGGTGATGTTGTTTAACA+TGG | 0.521774 | 2_3:+42418302 | Msa0292800:three_prime_UTR |
| CTTACCTATGTTACAGGAGA+TGG | 0.522199 | 2_3:+42416991 | Msa0292800:CDS |
| AATCCTTTGTAGTCATGAGC+TGG | 0.527077 | 2_3:-42417498 | None:intergenic |
| ACCCTATTAATACGCGGATG+CGG | 0.527840 | 2_3:+42417054 | Msa0292800:CDS |
| TTCAAAAGCAAGTGGTGCAA+CGG | 0.535603 | 2_3:+42416122 | Msa0292800:CDS |
| AAGGCAACCTAAGGTATGAC+CGG | 0.536383 | 2_3:-42416971 | None:intergenic |
| TGATTTGAGCTTAATTGTAG+TGG | 0.542014 | 2_3:-42414257 | None:intergenic |
| GTATACATTGTGCATAGGAA+TGG | 0.545692 | 2_3:-42414023 | None:intergenic |
| GCGTATTAATAGGGTATCTC+CGG | 0.547462 | 2_3:-42417046 | None:intergenic |
| TATTAATACGCGGATGCGGA+AGG | 0.552808 | 2_3:+42417058 | Msa0292800:CDS |
| GATTATTGGCCTCAATGGTA+TGG | 0.556591 | 2_3:+42418412 | Msa0292800:three_prime_UTR |
| CATTGTGCATAGGAATGGAA+TGG | 0.559510 | 2_3:-42414018 | None:intergenic |
| TTAGGTAAGCACAGTTGGAG+AGG | 0.561821 | 2_3:+42417597 | Msa0292800:intron |
| TGACCAACCTCAACCTCGAA+TGG | 0.562289 | 2_3:+42417017 | Msa0292800:CDS |
| TACTGGAACTGGCCTCATCA+AGG | 0.563271 | 2_3:+42414869 | Msa0292800:CDS |
| ACCTCATCCTTTGTTAAGCG+CGG | 0.563453 | 2_3:-42417634 | None:intergenic |
| TCTGTTATTTCAAAAGCAAG+TGG | 0.564924 | 2_3:+42416114 | Msa0292800:CDS |
| CATCTCCTGTAACATAGGTA+AGG | 0.569527 | 2_3:-42416990 | None:intergenic |
| TCTCCGGTGAATGCCATTCG+AGG | 0.574709 | 2_3:-42417030 | None:intergenic |
| AACATAGGTAAGGCAACCTA+AGG | 0.574988 | 2_3:-42416980 | None:intergenic |
| ACTCCACAAACCATATTAGC+CGG | 0.586665 | 2_3:-42418233 | None:intergenic |
| AGATAGGAGATAAAAGAGAG+AGG | 0.589384 | 2_3:-42414134 | None:intergenic |
| TCCGCGCTTAACAAAGGATG+AGG | 0.590157 | 2_3:+42417633 | Msa0292800:CDS |
| ATGCCATTCGAGGTTGAGGT+TGG | 0.592927 | 2_3:-42417020 | None:intergenic |
| CATGTGAAGCATCAGCAAGA+AGG | 0.595346 | 2_3:-42414366 | None:intergenic |
| CAACCTCGAATGGCATTCAC+CGG | 0.598711 | 2_3:+42417027 | Msa0292800:CDS |
| GTATAATCCGCGCTTAACAA+AGG | 0.606464 | 2_3:+42417627 | Msa0292800:CDS |
| GGAAACTTTCAAGAACATCA+TGG | 0.608737 | 2_3:+42418035 | Msa0292800:intron |
| TTACTTGAAATGCTGGGCCA+TGG | 0.610171 | 2_3:+42418552 | Msa0292800:three_prime_UTR |
| AATCAGTTACTTGAAATGCT+GGG | 0.620012 | 2_3:+42418546 | Msa0292800:three_prime_UTR |
| ATTCTTGTCCGACAGTCGCA+TGG | 0.623218 | 2_3:+42418284 | Msa0292800:three_prime_UTR |
| CAACATCACCATGCGACTGT+CGG | 0.627794 | 2_3:-42418292 | None:intergenic |
| AGGCAACCTAAGGTATGACC+GGG | 0.633399 | 2_3:-42416970 | None:intergenic |
| AGATTGTATACATTGTGCAT+AGG | 0.635220 | 2_3:-42414028 | None:intergenic |
| AACCAAATATAACAGAACAC+AGG | 0.653214 | 2_3:-42418435 | None:intergenic |
| GAATTGGGATTTAAGCATTG+TGG | 0.654567 | 2_3:-42414179 | None:intergenic |
| TATCCAGCTCATGACTACAA+AGG | 0.655933 | 2_3:+42417495 | Msa0292800:CDS |
| GAACACAGGCCATACCATTG+AGG | 0.656019 | 2_3:-42418421 | None:intergenic |
| GAATGATGAATTCTATGGAG+AGG | 0.657872 | 2_3:-42414060 | None:intergenic |
| GCATTCTACATACCTTGATG+AGG | 0.664282 | 2_3:-42414881 | None:intergenic |
| GGTGATGTTGTTTAACATGG+AGG | 0.701736 | 2_3:+42418305 | Msa0292800:three_prime_UTR |
| TATCTACTGTCCTATCAACA+GGG | 0.703833 | 2_3:-42414770 | None:intergenic |
| GGAGATACCCTATTAATACG+CGG | 0.780547 | 2_3:+42417048 | Msa0292800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATGAAATATAATTAAATA+CGG | + | chr2_3:42416607-42416626 | Msa0292800:intron | 10.0% |
| !! | AAAAAAATATAAAATTGACA+AGG | - | chr2_3:42418091-42418110 | None:intergenic | 10.0% |
| !!! | TTATTTTTTGAATTTGATGA+TGG | + | chr2_3:42414479-42414498 | Msa0292800:intron | 15.0% |
| !!! | TATTTTTTGAATTTGATGAT+GGG | + | chr2_3:42414480-42414499 | Msa0292800:intron | 15.0% |
| !!! | TTATTTGTTGAATTGAATAA+TGG | + | chr2_3:42414605-42414624 | Msa0292800:intron | 15.0% |
| !!! | TATTTGTTGAATTGAATAAT+GGG | + | chr2_3:42414606-42414625 | Msa0292800:intron | 15.0% |
| !!! | GCTATTTTTATAAGATATAT+TGG | + | chr2_3:42415284-42415303 | Msa0292800:intron | 15.0% |
| !! | AGAAAAGTAATGTAAAATAT+TGG | - | chr2_3:42416026-42416045 | None:intergenic | 15.0% |
| !! | NNNNNAAAATATCACCAAAA+CGG | - | chr2_3:42416179-42416198 | None:intergenic | 15.0% |
| !! | CAAACAATAAATATTAATCT+AGG | - | chr2_3:42416323-42416342 | None:intergenic | 15.0% |
| !! | TTAAAAAATTGCTTCTTTAT+TGG | + | chr2_3:42416433-42416452 | Msa0292800:intron | 15.0% |
| !! | TAAAAAATTGCTTCTTTATT+GGG | + | chr2_3:42416434-42416453 | Msa0292800:intron | 15.0% |
| !! | AGATTAATCTTAAACTAATA+CGG | + | chr2_3:42416718-42416737 | Msa0292800:intron | 15.0% |
| !! | TAAAATCGATAATAAGAATA+AGG | - | chr2_3:42416828-42416847 | None:intergenic | 15.0% |
| !! | AAAATAGATTAAGAAATTTC+TGG | + | chr2_3:42417386-42417405 | Msa0292800:intron | 15.0% |
| !!! | GTAAATAAATTGATGATTAT+TGG | + | chr2_3:42418398-42418417 | Msa0292800:three_prime_UTR | 15.0% |
| !! | AATCAATATCAAATCCAAAT+TGG | - | chr2_3:42413982-42414001 | None:intergenic | 20.0% |
| !! | AAATATTAGAGAATAGAGAT+AGG | - | chr2_3:42414153-42414172 | None:intergenic | 20.0% |
| !! | TTATCACTAATTCAAGAATT+GGG | + | chr2_3:42414798-42414817 | Msa0292800:CDS | 20.0% |
| !! | TAAAACAATAATTTACCATC+AGG | - | chr2_3:42414908-42414927 | None:intergenic | 20.0% |
| !!! | TGTTTTAAACTTTACTCTAA+AGG | + | chr2_3:42414921-42414940 | Msa0292800:intron | 20.0% |
| !!! | TTTTTCACAATTTAAGTTTG+AGG | - | chr2_3:42415211-42415230 | None:intergenic | 20.0% |
| !! | ATCAAAATAGCTTATAGAAA+TGG | + | chr2_3:42415241-42415260 | Msa0292800:intron | 20.0% |
| !! | TATTCTGTTATAAGAGAAAA+AGG | - | chr2_3:42415772-42415791 | None:intergenic | 20.0% |
| !! | AAATAGATAGAAGTTATGAT+AGG | - | chr2_3:42415917-42415936 | None:intergenic | 20.0% |
| !!! | CTATTTCCTTAGATTTTTAT+TGG | + | chr2_3:42415931-42415950 | Msa0292800:intron | 20.0% |
| !! | AAAAAATTGCTTCTTTATTG+GGG | + | chr2_3:42416435-42416454 | Msa0292800:intron | 20.0% |
| !!! | ATTATCGATTTTAGATGAAA+TGG | + | chr2_3:42416835-42416854 | Msa0292800:intron | 20.0% |
| !!! | TTATCGATTTTAGATGAAAT+GGG | + | chr2_3:42416836-42416855 | Msa0292800:intron | 20.0% |
| !!! | ATCTTATTTTCTCTTATGAT+GGG | + | chr2_3:42416875-42416894 | Msa0292800:intron | 20.0% |
| !! | TATATCACACAATAAAATAG+AGG | - | chr2_3:42417155-42417174 | None:intergenic | 20.0% |
| !!! | CTATTTTATTGTGTGATATA+AGG | + | chr2_3:42417155-42417174 | Msa0292800:intron | 20.0% |
| !! | TGATGAATTTACAAAATATC+CGG | - | chr2_3:42417197-42417216 | None:intergenic | 20.0% |
| !! | TGGATTAAGCATATAAATTA+TGG | - | chr2_3:42417675-42417694 | None:intergenic | 20.0% |
| !! | ATATAAAATTGACAAGGTTT+AGG | - | chr2_3:42418085-42418104 | None:intergenic | 20.0% |
| !!! | ACATGTTCATTACTAATTTT+TGG | + | chr2_3:42418488-42418507 | Msa0292800:three_prime_UTR | 20.0% |
| !!! | TACTAATTTTTGGAGTTAAT+AGG | + | chr2_3:42418498-42418517 | Msa0292800:three_prime_UTR | 20.0% |
| ! | AAATCCAAATTGGTTGTTAT+GGG | - | chr2_3:42413972-42413991 | None:intergenic | 25.0% |
| ! | TAATGGAATGATGAATTCTA+TGG | - | chr2_3:42414068-42414087 | None:intergenic | 25.0% |
| ! | TGTGTCTGTGAATATAATAA+TGG | - | chr2_3:42414085-42414104 | None:intergenic | 25.0% |
| ! | ATTGAAAGAGAAGAAAAAGA+GGG | - | chr2_3:42414235-42414254 | None:intergenic | 25.0% |
| ! | AATTGAAAGAGAAGAAAAAG+AGG | - | chr2_3:42414236-42414255 | None:intergenic | 25.0% |
| ! | AATTAAGCTCAAATCACAAA+TGG | + | chr2_3:42414264-42414283 | Msa0292800:CDS | 25.0% |
| !! | ATTTGTGCGAAATTTTTATC+TGG | + | chr2_3:42414449-42414468 | Msa0292800:intron | 25.0% |
| !! | TTTGTGCGAAATTTTTATCT+GGG | + | chr2_3:42414450-42414469 | Msa0292800:intron | 25.0% |
| !! | TGTGAAAAAAGTGATTTTGA+AGG | + | chr2_3:42414540-42414559 | Msa0292800:intron | 25.0% |
| !! | GTGAAAAAAGTGATTTTGAA+GGG | + | chr2_3:42414541-42414560 | Msa0292800:intron | 25.0% |
| !!! | TTCAGTTGTTTTGATGATTT+TGG | + | chr2_3:42414674-42414693 | Msa0292800:intron | 25.0% |
| ! | CTTATCACTAATTCAAGAAT+TGG | + | chr2_3:42414797-42414816 | Msa0292800:CDS | 25.0% |
| ! | GTATAAACAAAAATCTTCAC+AGG | + | chr2_3:42415031-42415050 | Msa0292800:intron | 25.0% |
| !! | CAATTTTCACAAGCTTTTTA+CGG | - | chr2_3:42415328-42415347 | None:intergenic | 25.0% |
| !!! | GTGTATTGATTGATTGAAAA+TGG | + | chr2_3:42415599-42415618 | Msa0292800:intron | 25.0% |
| ! | CTTCACAGAAGAAAAAAAAA+AGG | + | chr2_3:42415624-42415643 | Msa0292800:intron | 25.0% |
| !! | ATCATTCTCCTGATTTTTAT+GGG | - | chr2_3:42415799-42415818 | None:intergenic | 25.0% |
| !! | TATCATTCTCCTGATTTTTA+TGG | - | chr2_3:42415800-42415819 | None:intergenic | 25.0% |
| ! | CAAACACCAATAAAAATCTA+AGG | - | chr2_3:42415940-42415959 | None:intergenic | 25.0% |
| ! | AGAATAAAGTGACTAAACAA+AGG | - | chr2_3:42415988-42416007 | None:intergenic | 25.0% |
| !!! | TTTACATTACTTTTCTGTAG+TGG | + | chr2_3:42416030-42416049 | Msa0292800:intron | 25.0% |
| !! | GAAATAACAGATTTTACATC+AGG | - | chr2_3:42416105-42416124 | None:intergenic | 25.0% |
| ! | TCATAATCTTCCTAATGTTA+GGG | - | chr2_3:42416590-42416609 | None:intergenic | 25.0% |
| ! | ATCATAATCTTCCTAATGTT+AGG | - | chr2_3:42416591-42416610 | None:intergenic | 25.0% |
| !!! | GATCTTATTTTCTCTTATGA+TGG | + | chr2_3:42416874-42416893 | Msa0292800:intron | 25.0% |
| ! | ATTCACATCAATTATTATGC+AGG | + | chr2_3:42417240-42417259 | Msa0292800:intron | 25.0% |
| ! | TTCACATCAATTATTATGCA+GGG | + | chr2_3:42417241-42417260 | Msa0292800:intron | 25.0% |
| !! | ATTACTCTTTCACATTTTTC+TGG | + | chr2_3:42417436-42417455 | Msa0292800:intron | 25.0% |
| !!! | GAAAGTAGAACTTTTAATTG+TGG | + | chr2_3:42417710-42417729 | Msa0292800:intron | 25.0% |
| !!! | GAATTTTGTTATGCTATATC+TGG | - | chr2_3:42417780-42417799 | None:intergenic | 25.0% |
| !!! | AGCATGTTAAAACGATTTTT+TGG | - | chr2_3:42417939-42417958 | None:intergenic | 25.0% |
| ! | TATGAGATATTACTGAGTTT+GGG | - | chr2_3:42417988-42418007 | None:intergenic | 25.0% |
| ! | ATATGAGATATTACTGAGTT+TGG | - | chr2_3:42417989-42418008 | None:intergenic | 25.0% |
| !! | TGATCTATTTTATCTGATGA+TGG | + | chr2_3:42418148-42418167 | Msa0292800:intron | 25.0% |
| !! | CATTTTTCTATTCAACACAA+AGG | - | chr2_3:42418368-42418387 | None:intergenic | 25.0% |
| ! | TGGAGTTAATAGGATATATA+CGG | + | chr2_3:42418508-42418527 | Msa0292800:three_prime_UTR | 25.0% |
| ! | TATATACGGAAATAACTAGT+TGG | + | chr2_3:42418522-42418541 | Msa0292800:three_prime_UTR | 25.0% |
| CAAATCCAAATTGGTTGTTA+TGG | - | chr2_3:42413973-42413992 | None:intergenic | 30.0% | |
| AGATTGTATACATTGTGCAT+AGG | - | chr2_3:42414031-42414050 | None:intergenic | 30.0% | |
| AGGGTTTATAAGGAAAAAAG+GGG | - | chr2_3:42414216-42414235 | None:intergenic | 30.0% | |
| GAGGGTTTATAAGGAAAAAA+GGG | - | chr2_3:42414217-42414236 | None:intergenic | 30.0% | |
| AGAGGGTTTATAAGGAAAAA+AGG | - | chr2_3:42414218-42414237 | None:intergenic | 30.0% | |
| GAAGAAAAAGAGGGTTTATA+AGG | - | chr2_3:42414226-42414245 | None:intergenic | 30.0% | |
| TGATTTGAGCTTAATTGTAG+TGG | - | chr2_3:42414260-42414279 | None:intergenic | 30.0% | |
| TTATGTTAACTTACAACTGC+TGG | - | chr2_3:42414400-42414419 | None:intergenic | 30.0% | |
| !!! | ATGATGGGTTTCTTCTATTT+TGG | + | chr2_3:42414495-42414514 | Msa0292800:intron | 30.0% |
| ! | ATTTGTGGGAAATTTTTACG+TGG | + | chr2_3:42414575-42414594 | Msa0292800:intron | 30.0% |
| ! | TTTGTGGGAAATTTTTACGT+GGG | + | chr2_3:42414576-42414595 | Msa0292800:intron | 30.0% |
| AACAAAAATCTTCACAGGAA+TGG | + | chr2_3:42415036-42415055 | Msa0292800:intron | 30.0% | |
| ! | ACATACCTTGATGATTACAT+TGG | + | chr2_3:42415084-42415103 | Msa0292800:intron | 30.0% |
| ACACCTATTATGACAACTTA+AGG | - | chr2_3:42415111-42415130 | None:intergenic | 30.0% | |
| !!! | ATAAGCTATTTTGATGACGT+TGG | + | chr2_3:42415174-42415193 | Msa0292800:intron | 30.0% |
| ! | TGATTTATATAGGGCTTGTT+TGG | - | chr2_3:42415427-42415446 | None:intergenic | 30.0% |
| AAACAAGCCCTATATAAATC+AGG | + | chr2_3:42415426-42415445 | Msa0292800:intron | 30.0% | |
| AACAAGCCCTATATAAATCA+GGG | + | chr2_3:42415427-42415446 | Msa0292800:intron | 30.0% | |
| ATACACCCCTGATTTATATA+GGG | - | chr2_3:42415436-42415455 | None:intergenic | 30.0% | |
| TATACACCCCTGATTTATAT+AGG | - | chr2_3:42415437-42415456 | None:intergenic | 30.0% | |
| GTATATATGTTTAGTAGCAC+TGG | + | chr2_3:42415452-42415471 | Msa0292800:intron | 30.0% | |
| ! | TTGAATGTAACAAGAAGTGT+TGG | - | chr2_3:42415542-42415561 | None:intergenic | 30.0% |
| CTGTTATAAGAGAAAAAGGA+GGG | - | chr2_3:42415768-42415787 | None:intergenic | 30.0% | |
| TCTGTTATAAGAGAAAAAGG+AGG | - | chr2_3:42415769-42415788 | None:intergenic | 30.0% | |
| ! | TCATTCTCCTGATTTTTATG+GGG | - | chr2_3:42415798-42415817 | None:intergenic | 30.0% |
| !! | TCTGTTATTTCAAAAGCAAG+TGG | + | chr2_3:42416114-42416133 | Msa0292800:CDS | 30.0% |
| ATAGGCAACAATGAAATGTA+GGG | - | chr2_3:42416488-42416507 | None:intergenic | 30.0% | |
| TATAGGCAACAATGAAATGT+AGG | - | chr2_3:42416489-42416508 | None:intergenic | 30.0% | |
| ATCTTAAACTAATACGGTGA+TGG | + | chr2_3:42416724-42416743 | Msa0292800:intron | 30.0% | |
| GTAAACTTTGTGCAAAGAAA+TGG | + | chr2_3:42416772-42416791 | Msa0292800:intron | 30.0% | |
| TTTGTGCAAAGAAATGGAAT+GGG | + | chr2_3:42416778-42416797 | Msa0292800:intron | 30.0% | |
| AAATGGGAAATTTGTGCAAA+TGG | + | chr2_3:42416852-42416871 | Msa0292800:intron | 30.0% | |
| AATATTGTCTTCATTGCTGT+AGG | + | chr2_3:42416936-42416955 | Msa0292800:intron | 30.0% | |
| TTACAAATCAATCCATTCAC+AGG | + | chr2_3:42417282-42417301 | Msa0292800:intron | 30.0% | |
| !!! | CAACTTTTTTCCTTTTTGAC+TGG | + | chr2_3:42417342-42417361 | Msa0292800:intron | 30.0% |
| GTTTAACATTCCAGTCAAAA+AGG | - | chr2_3:42417355-42417374 | None:intergenic | 30.0% | |
| ! | AGGAAACCTTTTATGGTTTT+TGG | + | chr2_3:42417528-42417547 | Msa0292800:intron | 30.0% |
| !!! | TTATTTTAGGTAAGCACAGT+TGG | + | chr2_3:42417592-42417611 | Msa0292800:intron | 30.0% |
| CTTTCATAAGTTTCGTTTAG+TGG | - | chr2_3:42417695-42417714 | None:intergenic | 30.0% | |
| !!! | TGTTAAAACGATTTTTTGGC+TGG | - | chr2_3:42417935-42417954 | None:intergenic | 30.0% |
| AACCAAATATAACAGAACAC+AGG | - | chr2_3:42418438-42418457 | None:intergenic | 30.0% | |
| AAATCAGTTACTTGAAATGC+TGG | + | chr2_3:42418545-42418564 | Msa0292800:three_prime_UTR | 30.0% | |
| AATCAGTTACTTGAAATGCT+GGG | + | chr2_3:42418546-42418565 | Msa0292800:three_prime_UTR | 30.0% | |
| TGATCCCATAACAACCAATT+TGG | + | chr2_3:42413965-42413984 | Msa0292800:five_prime_UTR | 35.0% | |
| GTATACATTGTGCATAGGAA+TGG | - | chr2_3:42414026-42414045 | None:intergenic | 35.0% | |
| GAATGATGAATTCTATGGAG+AGG | - | chr2_3:42414063-42414082 | None:intergenic | 35.0% | |
| ATGACGATGTTGTTGATGTT+GGG | - | chr2_3:42414109-42414128 | None:intergenic | 35.0% | |
| AATGACGATGTTGTTGATGT+TGG | - | chr2_3:42414110-42414129 | None:intergenic | 35.0% | |
| AGATAGGAGATAAAAGAGAG+AGG | - | chr2_3:42414137-42414156 | None:intergenic | 35.0% | |
| ! | GAATTGGGATTTAAGCATTG+TGG | - | chr2_3:42414182-42414201 | None:intergenic | 35.0% |
| GGGTTTATAAGGAAAAAAGG+GGG | - | chr2_3:42414215-42414234 | None:intergenic | 35.0% | |
| !! | GTTTCGTCAGCTTTTTGAAA+AGG | + | chr2_3:42414324-42414343 | Msa0292800:CDS | 35.0% |
| ! | TGCGAAATTTTTATCTGGGT+CGG | + | chr2_3:42414454-42414473 | Msa0292800:intron | 35.0% |
| AGGGTCTGTTTGATTATTTG+TGG | + | chr2_3:42414560-42414579 | Msa0292800:intron | 35.0% | |
| GGGTCTGTTTGATTATTTGT+GGG | + | chr2_3:42414561-42414580 | Msa0292800:intron | 35.0% | |
| TATCTACTGTCCTATCAACA+GGG | - | chr2_3:42414773-42414792 | None:intergenic | 35.0% | |
| AAAGGAAAGTGAGCAAGAAA+TGG | + | chr2_3:42414939-42414958 | Msa0292800:intron | 35.0% | |
| AAGGACCAATGTAATCATCA+AGG | - | chr2_3:42415092-42415111 | None:intergenic | 35.0% | |
| ! | GGTCCTTAAGTTGTCATAAT+AGG | + | chr2_3:42415105-42415124 | Msa0292800:intron | 35.0% |
| !! | TAAGTTTTGTGAGACGGTTT+GGG | - | chr2_3:42415375-42415394 | None:intergenic | 35.0% |
| !! | ATAAGTTTTGTGAGACGGTT+TGG | - | chr2_3:42415376-42415395 | None:intergenic | 35.0% |
| !! | CTGACATAAGTTTTGTGAGA+CGG | - | chr2_3:42415381-42415400 | None:intergenic | 35.0% |
| ACAAGCCCTATATAAATCAG+GGG | + | chr2_3:42415428-42415447 | Msa0292800:intron | 35.0% | |
| GAAACGAGAATTTAAACCTC+TGG | + | chr2_3:42415572-42415591 | Msa0292800:intron | 35.0% | |
| AAAGTTCGATAGAGACAGTT+AGG | - | chr2_3:42415726-42415745 | None:intergenic | 35.0% | |
| TATAAGAGAAAAAGGAGGGA+AGG | - | chr2_3:42415764-42415783 | None:intergenic | 35.0% | |
| AATATCCCCCCATAAAAATC+AGG | + | chr2_3:42415788-42415807 | Msa0292800:intron | 35.0% | |
| ! | ATTCTCCTGATTTTTATGGG+GGG | - | chr2_3:42415796-42415815 | None:intergenic | 35.0% |
| ! | CATTCTCCTGATTTTTATGG+GGG | - | chr2_3:42415797-42415816 | None:intergenic | 35.0% |
| ATACACACACAACTTCTAGA+AGG | - | chr2_3:42415852-42415871 | None:intergenic | 35.0% | |
| AAGTTGTGTGTGTATGTGTT+GGG | + | chr2_3:42415857-42415876 | Msa0292800:intron | 35.0% | |
| GAAGTTATGATAGGATGTCA+AGG | - | chr2_3:42415908-42415927 | None:intergenic | 35.0% | |
| ! | TTATTGGTGTTTGCGTATCA+CGG | + | chr2_3:42415947-42415966 | Msa0292800:intron | 35.0% |
| AATTGCTTCTTTATTGGGGT+TGG | + | chr2_3:42416439-42416458 | Msa0292800:intron | 35.0% | |
| ! | TCTTCCTAATGTTAGGGTTT+TGG | - | chr2_3:42416584-42416603 | None:intergenic | 35.0% |
| !! | TAAGATAAGAGCTCTGAATC+TGG | + | chr2_3:42416652-42416671 | Msa0292800:intron | 35.0% |
| CTTTGTGCAAAGAAATGGAA+TGG | + | chr2_3:42416777-42416796 | Msa0292800:intron | 35.0% | |
| !! | GAAGTTGTCTTTTGATTCAC+TGG | - | chr2_3:42416804-42416823 | None:intergenic | 35.0% |
| ACATCAATTATTATGCAGGG+TGG | + | chr2_3:42417244-42417263 | Msa0292800:intron | 35.0% | |
| CATCAATTATTATGCAGGGT+GGG | + | chr2_3:42417245-42417264 | Msa0292800:intron | 35.0% | |
| GGAATGTTAAACAGCAACTT+AGG | + | chr2_3:42417363-42417382 | Msa0292800:intron | 35.0% | |
| ! | GGATAGAGTAAGGTATCTTT+AGG | - | chr2_3:42417480-42417499 | None:intergenic | 35.0% |
| ACTACAAAGGATTCTCTGTA+AGG | + | chr2_3:42417508-42417527 | Msa0292800:intron | 35.0% | |
| ! | CTCTGTAAGGAAACCTTTTA+TGG | + | chr2_3:42417521-42417540 | Msa0292800:intron | 35.0% |
| TGGCAACCAAAAACCATAAA+AGG | - | chr2_3:42417537-42417556 | None:intergenic | 35.0% | |
| ! | AATGTTAATCGCTCTTTTGC+AGG | + | chr2_3:42418014-42418033 | Msa0292800:intron | 35.0% |
| GGAAACTTTCAAGAACATCA+TGG | + | chr2_3:42418035-42418054 | Msa0292800:intron | 35.0% | |
| ! | CATGGTGATGTTGTTTAACA+TGG | + | chr2_3:42418302-42418321 | Msa0292800:three_prime_UTR | 35.0% |
| ! | TTGATGATTATTGGCCTCAA+TGG | + | chr2_3:42418407-42418426 | Msa0292800:three_prime_UTR | 35.0% |
| CATTGTGCATAGGAATGGAA+TGG | - | chr2_3:42414021-42414040 | None:intergenic | 40.0% | |
| GGGGGTGAATTTGATGAATT+GGG | - | chr2_3:42414197-42414216 | None:intergenic | 40.0% | |
| AGGGGGTGAATTTGATGAAT+TGG | - | chr2_3:42414198-42414217 | None:intergenic | 40.0% | |
| ! | TGGGAAATTTTTACGTGGGT+CGG | + | chr2_3:42414580-42414599 | Msa0292800:intron | 40.0% |
| AGTTGATTGACCCTGTTGAT+AGG | + | chr2_3:42414760-42414779 | Msa0292800:intron | 40.0% | |
| CTATCTACTGTCCTATCAAC+AGG | - | chr2_3:42414774-42414793 | None:intergenic | 40.0% | |
| GTACATGCTGATCATGTTAC+TGG | + | chr2_3:42414852-42414871 | Msa0292800:CDS | 40.0% | |
| GCATTCTACATACCTTGATG+AGG | - | chr2_3:42414884-42414903 | None:intergenic | 40.0% | |
| !!! | CTATTTTGATGACGTTGGCT+AGG | + | chr2_3:42415179-42415198 | Msa0292800:intron | 40.0% |
| ACAAGAACACTGACACATGT+AGG | - | chr2_3:42415504-42415523 | None:intergenic | 40.0% | |
| CAATCAATACACAGTTCCAG+AGG | - | chr2_3:42415591-42415610 | None:intergenic | 40.0% | |
| GAAGTTGTGTGTGTATGTGT+TGG | + | chr2_3:42415856-42415875 | Msa0292800:intron | 40.0% | |
| TCTGTAGTGGTAACTCAGTT+TGG | + | chr2_3:42416043-42416062 | Msa0292800:intron | 40.0% | |
| TTCAAAAGCAAGTGGTGCAA+CGG | + | chr2_3:42416122-42416141 | Msa0292800:CDS | 40.0% | |
| GCAGATCTTTACGTAGAACA+GGG | + | chr2_3:42416144-42416163 | Msa0292800:intron | 40.0% | |
| ! | CAGGGTGATAAAATCCGTTT+TGG | + | chr2_3:42416162-42416181 | Msa0292800:intron | 40.0% |
| !! | TTTATTGGGGTTGGTTGACA+AGG | + | chr2_3:42416448-42416467 | Msa0292800:intron | 40.0% |
| GTTGCCTATAAGAGAAGAAG+TGG | + | chr2_3:42416499-42416518 | Msa0292800:intron | 40.0% | |
| AGAGCCACTTCTTCTCTTAT+AGG | - | chr2_3:42416506-42416525 | None:intergenic | 40.0% | |
| ! | GAAGTGGCTCTATTTATGCT+TGG | + | chr2_3:42416515-42416534 | Msa0292800:intron | 40.0% |
| ! | TGGCTCTATTTATGCTTGGA+CGG | + | chr2_3:42416519-42416538 | Msa0292800:intron | 40.0% |
| ! | AATCTGGTTAGTCAAGCAGA+TGG | + | chr2_3:42416668-42416687 | Msa0292800:intron | 40.0% |
| !! | TCTCTTATGATGGGTGTGAA+TGG | + | chr2_3:42416884-42416903 | Msa0292800:intron | 40.0% |
| AACATAGGTAAGGCAACCTA+AGG | - | chr2_3:42416983-42417002 | None:intergenic | 40.0% | |
| CATCTCCTGTAACATAGGTA+AGG | - | chr2_3:42416993-42417012 | None:intergenic | 40.0% | |
| CTTACCTATGTTACAGGAGA+TGG | + | chr2_3:42416991-42417010 | Msa0292800:CDS | 40.0% | |
| ! | GCGTATTAATAGGGTATCTC+CGG | - | chr2_3:42417049-42417068 | None:intergenic | 40.0% |
| GGAGATACCCTATTAATACG+CGG | + | chr2_3:42417048-42417067 | Msa0292800:CDS | 40.0% | |
| TCAGGTATCAATGTTGTGTC+CGG | + | chr2_3:42417089-42417108 | Msa0292800:intron | 40.0% | |
| GTTAAGTTCATGCCTGTGAA+TGG | - | chr2_3:42417297-42417316 | None:intergenic | 40.0% | |
| TATCCAGCTCATGACTACAA+AGG | + | chr2_3:42417495-42417514 | Msa0292800:CDS | 40.0% | |
| AATCCTTTGTAGTCATGAGC+TGG | - | chr2_3:42417501-42417520 | None:intergenic | 40.0% | |
| GTATAATCCGCGCTTAACAA+AGG | + | chr2_3:42417627-42417646 | Msa0292800:CDS | 40.0% | |
| CTCTTTGCACTAACAGTGTA+TGG | - | chr2_3:42417824-42417843 | None:intergenic | 40.0% | |
| TGAGTTTCTGTTTCATCTGC+TGG | + | chr2_3:42417958-42417977 | Msa0292800:intron | 40.0% | |
| ! | ACAGCTACGTCGATCATTTT+TGG | - | chr2_3:42418212-42418231 | None:intergenic | 40.0% |
| ACTCCACAAACCATATTAGC+CGG | - | chr2_3:42418236-42418255 | None:intergenic | 40.0% | |
| !!! | AAGCTCAGCTTGTTTTGGAT+TGG | - | chr2_3:42418259-42418278 | None:intergenic | 40.0% |
| !! | GTTGAAAGCTCAGCTTGTTT+TGG | - | chr2_3:42418264-42418283 | None:intergenic | 40.0% |
| ! | GGTGATGTTGTTTAACATGG+AGG | + | chr2_3:42418305-42418324 | Msa0292800:three_prime_UTR | 40.0% |
| ! | GATTATTGGCCTCAATGGTA+TGG | + | chr2_3:42418412-42418431 | Msa0292800:three_prime_UTR | 40.0% |
| GGCCTGTGTTCTGTTATATT+TGG | + | chr2_3:42418433-42418452 | Msa0292800:three_prime_UTR | 40.0% | |
| ! | CATGTGAAGCATCAGCAAGA+AGG | - | chr2_3:42414369-42414388 | None:intergenic | 45.0% |
| GCTGATCATGTTACTGGAAC+TGG | + | chr2_3:42414858-42414877 | Msa0292800:CDS | 45.0% | |
| GGTATGTAGAATGCACCTGA+TGG | + | chr2_3:42414890-42414909 | Msa0292800:intron | 45.0% | |
| !! | TTGATGACGTTGGCTAGGAT+AGG | + | chr2_3:42415184-42415203 | Msa0292800:intron | 45.0% |
| !! | GTAACAAGAAGTGTTGGACG+CGG | - | chr2_3:42415536-42415555 | None:intergenic | 45.0% |
| GTTTAGGAGCAATACTGCTC+TGG | - | chr2_3:42415687-42415706 | None:intergenic | 45.0% | |
| AGCAGTATTGCTCCTAAACC+AGG | + | chr2_3:42415688-42415707 | Msa0292800:intron | 45.0% | |
| AGAGAGATTCTGCCTGGTTT+AGG | - | chr2_3:42415703-42415722 | None:intergenic | 45.0% | |
| TAGAAGGTTGCAGAAGCAGA+GGG | - | chr2_3:42415836-42415855 | None:intergenic | 45.0% | |
| TGTGTATGTGTTGGGCTCAA+TGG | + | chr2_3:42415865-42415884 | Msa0292800:intron | 45.0% | |
| TATGTGTTGGGCTCAATGGT+TGG | + | chr2_3:42415869-42415888 | Msa0292800:intron | 45.0% | |
| ATGTGTTGGGCTCAATGGTT+GGG | + | chr2_3:42415870-42415889 | Msa0292800:intron | 45.0% | |
| TCAATGGTTGGGTCATCACA+TGG | + | chr2_3:42415881-42415900 | Msa0292800:intron | 45.0% | |
| GGCAGATCTTTACGTAGAAC+AGG | + | chr2_3:42416143-42416162 | Msa0292800:intron | 45.0% | |
| GTCGCCAAAACCCTAACATT+AGG | + | chr2_3:42416577-42416596 | Msa0292800:intron | 45.0% | |
| AAGGCAACCTAAGGTATGAC+CGG | - | chr2_3:42416974-42416993 | None:intergenic | 45.0% | |
| GGTTGCCTTACCTATGTTAC+AGG | + | chr2_3:42416985-42417004 | Msa0292800:CDS | 45.0% | |
| AGGTCCATCTCCTGTAACAT+AGG | - | chr2_3:42416998-42417017 | None:intergenic | 45.0% | |
| ACCCTATTAATACGCGGATG+CGG | + | chr2_3:42417054-42417073 | Msa0292800:CDS | 45.0% | |
| TCCGCATCCGCGTATTAATA+GGG | - | chr2_3:42417058-42417077 | None:intergenic | 45.0% | |
| TTCCGCATCCGCGTATTAAT+AGG | - | chr2_3:42417059-42417078 | None:intergenic | 45.0% | |
| TATTAATACGCGGATGCGGA+AGG | + | chr2_3:42417058-42417077 | Msa0292800:CDS | 45.0% | |
| ! | ATGCGGAAGGACAGATTTTC+AGG | + | chr2_3:42417071-42417090 | Msa0292800:CDS | 45.0% |
| AGGCTGAGTTTCACTCTTAC+CGG | + | chr2_3:42417175-42417194 | Msa0292800:intron | 45.0% | |
| GTCATGAGCTGGATAGAGTA+AGG | - | chr2_3:42417490-42417509 | None:intergenic | 45.0% | |
| TTAGGTAAGCACAGTTGGAG+AGG | + | chr2_3:42417597-42417616 | Msa0292800:intron | 45.0% | |
| ACCTCATCCTTTGTTAAGCG+CGG | - | chr2_3:42417637-42417656 | None:intergenic | 45.0% | |
| TTAATTGTGGCGAGAGACTC+TGG | + | chr2_3:42417723-42417742 | Msa0292800:intron | 45.0% | |
| GGTTACACCATTGTCAATCG+CGG | - | chr2_3:42417914-42417933 | None:intergenic | 45.0% | |
| AATGATCGACGTAGCTGTTC+CGG | + | chr2_3:42418214-42418233 | Msa0292800:CDS | 45.0% | |
| GTTCCGGCTAATATGGTTTG+TGG | + | chr2_3:42418230-42418249 | Msa0292800:CDS | 45.0% | |
| TTACTTGAAATGCTGGGCCA+TGG | + | chr2_3:42418552-42418571 | Msa0292800:three_prime_UTR | 45.0% | |
| !!! | AAAATAAACTATATAAATTT+TGG | - | chr2_3:42417557-42417576 | None:intergenic | 5.0% |
| !!! | TATAAATATACTATTATTTT+AGG | + | chr2_3:42417579-42417598 | Msa0292800:intron | 5.0% |
| ! | TACTGGAACTGGCCTCATCA+AGG | + | chr2_3:42414869-42414888 | Msa0292800:CDS | 50.0% |
| !! | GTGTGGGAGTTCTAGAACTC+TGG | - | chr2_3:42415665-42415684 | None:intergenic | 50.0% |
| GAGCAATACTGCTCTGGTGT+GGG | - | chr2_3:42415681-42415700 | None:intergenic | 50.0% | |
| GTTAGGAGAGAGATTCTGCC+TGG | - | chr2_3:42415709-42415728 | None:intergenic | 50.0% | |
| CTAGAAGGTTGCAGAAGCAG+AGG | - | chr2_3:42415837-42415856 | None:intergenic | 50.0% | |
| AGGCAACCTAAGGTATGACC+GGG | - | chr2_3:42416973-42416992 | None:intergenic | 50.0% | |
| ! | ATTCGAGGTTGAGGTTGGTC+AGG | - | chr2_3:42417018-42417037 | None:intergenic | 50.0% |
| TGACCAACCTCAACCTCGAA+TGG | + | chr2_3:42417017-42417036 | Msa0292800:CDS | 50.0% | |
| ATGCCATTCGAGGTTGAGGT+TGG | - | chr2_3:42417023-42417042 | None:intergenic | 50.0% | |
| GTGAATGCCATTCGAGGTTG+AGG | - | chr2_3:42417027-42417046 | None:intergenic | 50.0% | |
| CAACCTCGAATGGCATTCAC+CGG | + | chr2_3:42417027-42417046 | Msa0292800:CDS | 50.0% | |
| TCCGCGCTTAACAAAGGATG+AGG | + | chr2_3:42417633-42417652 | Msa0292800:CDS | 50.0% | |
| GCTGTAGCGCTGTAGCATAA+TGG | + | chr2_3:42417859-42417878 | Msa0292800:intron | 50.0% | |
| TCGTGATCCGCGATTGACAA+TGG | + | chr2_3:42417904-42417923 | Msa0292800:intron | 50.0% | |
| CGTAGCTGTTCCGGCTAATA+TGG | + | chr2_3:42418223-42418242 | Msa0292800:CDS | 50.0% | |
| ATTCTTGTCCGACAGTCGCA+TGG | + | chr2_3:42418284-42418303 | Msa0292800:three_prime_UTR | 50.0% | |
| CAACATCACCATGCGACTGT+CGG | - | chr2_3:42418295-42418314 | None:intergenic | 50.0% | |
| GAACACAGGCCATACCATTG+AGG | - | chr2_3:42418424-42418443 | None:intergenic | 50.0% | |
| GGAGCAATACTGCTCTGGTG+TGG | - | chr2_3:42415682-42415701 | None:intergenic | 55.0% | |
| GCAACTCCCGGTCATACCTT+AGG | + | chr2_3:42416964-42416983 | Msa0292800:CDS | 55.0% | |
| TCTCCGGTGAATGCCATTCG+AGG | - | chr2_3:42417033-42417052 | None:intergenic | 55.0% | |
| GTCCGGTGTGTGTGTGTGTT+CGG | + | chr2_3:42417106-42417125 | Msa0292800:intron | 55.0% | |
| CACCGAACACACACACACAC+CGG | - | chr2_3:42417111-42417130 | None:intergenic | 55.0% | |
| !! | GCGTATCACGGTGTTGCGCA+TGG | + | chr2_3:42415959-42415978 | Msa0292800:intron | 60.0% |
| CTGTAGGTTCGCGCAACTCC+CGG | + | chr2_3:42416952-42416971 | Msa0292800:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 42413954 | 42418588 | 42413954 | ID=Msa0292800;Name=Msa0292800 |
| chr2_3 | mRNA | 42413954 | 42418588 | 42413954 | ID=Msa0292800-mRNA-1;Parent=Msa0292800;Name=Msa0292800-mRNA-1;_AED=0.19;_eAED=0.19;_QI=77|0.71|0.75|1|0.85|0.87|8|314|307 |
| chr2_3 | exon | 42413954 | 42414405 | 42413954 | ID=Msa0292800-mRNA-1:exon:13575;Parent=Msa0292800-mRNA-1 |
| chr2_3 | exon | 42414762 | 42414890 | 42414762 | ID=Msa0292800-mRNA-1:exon:13576;Parent=Msa0292800-mRNA-1 |
| chr2_3 | exon | 42416093 | 42416155 | 42416093 | ID=Msa0292800-mRNA-1:exon:13577;Parent=Msa0292800-mRNA-1 |
| chr2_3 | exon | 42416958 | 42417092 | 42416958 | ID=Msa0292800-mRNA-1:exon:13578;Parent=Msa0292800-mRNA-1 |
| chr2_3 | exon | 42417465 | 42417524 | 42417465 | ID=Msa0292800-mRNA-1:exon:13579;Parent=Msa0292800-mRNA-1 |
| chr2_3 | exon | 42417601 | 42417654 | 42417601 | ID=Msa0292800-mRNA-1:exon:13580;Parent=Msa0292800-mRNA-1 |
| chr2_3 | exon | 42418036 | 42418060 | 42418036 | ID=Msa0292800-mRNA-1:exon:13581;Parent=Msa0292800-mRNA-1 |
| chr2_3 | exon | 42418192 | 42418588 | 42418192 | ID=Msa0292800-mRNA-1:exon:13582;Parent=Msa0292800-mRNA-1 |
| chr2_3 | five_prime_UTR | 42413954 | 42414030 | 42413954 | ID=Msa0292800-mRNA-1:five_prime_utr;Parent=Msa0292800-mRNA-1 |
| chr2_3 | CDS | 42414031 | 42414405 | 42414031 | ID=Msa0292800-mRNA-1:cds;Parent=Msa0292800-mRNA-1 |
| chr2_3 | CDS | 42414762 | 42414890 | 42414762 | ID=Msa0292800-mRNA-1:cds;Parent=Msa0292800-mRNA-1 |
| chr2_3 | CDS | 42416093 | 42416155 | 42416093 | ID=Msa0292800-mRNA-1:cds;Parent=Msa0292800-mRNA-1 |
| chr2_3 | CDS | 42416958 | 42417092 | 42416958 | ID=Msa0292800-mRNA-1:cds;Parent=Msa0292800-mRNA-1 |
| chr2_3 | CDS | 42417465 | 42417524 | 42417465 | ID=Msa0292800-mRNA-1:cds;Parent=Msa0292800-mRNA-1 |
| chr2_3 | CDS | 42417601 | 42417654 | 42417601 | ID=Msa0292800-mRNA-1:cds;Parent=Msa0292800-mRNA-1 |
| chr2_3 | CDS | 42418036 | 42418060 | 42418036 | ID=Msa0292800-mRNA-1:cds;Parent=Msa0292800-mRNA-1 |
| chr2_3 | CDS | 42418192 | 42418274 | 42418192 | ID=Msa0292800-mRNA-1:cds;Parent=Msa0292800-mRNA-1 |
| chr2_3 | three_prime_UTR | 42418275 | 42418588 | 42418275 | ID=Msa0292800-mRNA-1:three_prime_utr;Parent=Msa0292800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
