Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213450 | KEH38463.1 | 94.737 | 285 | 1 | 1 | 52 | 322 | 1 | 285 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213450 | sp|Q9C8L4|ETHE1_ARATH | 78.903 | 237 | 36 | 1 | 96 | 318 | 51 | 287 | 6.80e-139 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213450 | A0A072VAN8 | 94.737 | 285 | 1 | 1 | 52 | 322 | 1 | 285 | 0.0 | 549 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0213450 | Msa0242700 | 0.820142 | 8.018334e-53 | -8.615850e-47 |
| Msa0213450 | Msa0292800 | 0.861603 | 9.133675e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213450 | MtrunA17_Chr2g0313641 | 92.578 | 256 | 5 | 1 | 52 | 293 | 1 | 256 | 5.85e-172 | 477 |
| Msa0213450 | MtrunA17_Chr5g0428611 | 37.500 | 176 | 84 | 9 | 107 | 265 | 10 | 176 | 1.55e-19 | 86.3 |
| Msa0213450 | MtrunA17_Chr2g0313651 | 97.222 | 36 | 1 | 0 | 287 | 322 | 7 | 42 | 5.04e-18 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213450 | AT1G53580.1 | 78.903 | 237 | 36 | 1 | 96 | 318 | 51 | 287 | 6.91e-140 | 397 |
| Msa0213450 | AT1G53580.2 | 78.481 | 237 | 37 | 1 | 96 | 318 | 51 | 287 | 6.65e-139 | 395 |
| Msa0213450 | AT3G10850.1 | 34.091 | 176 | 90 | 9 | 107 | 265 | 10 | 176 | 2.35e-17 | 80.9 |
Find 82 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAATAAATTGATGATTAT+TGG | 0.175380 | 2_1:+56391872 | Msa0213450:three_prime_UTR |
| TTCCGCATCCGCGTATTAAT+AGG | 0.246314 | 2_1:-56390529 | None:intergenic |
| CGTAGCTGTTCCGGCTAATA+TGG | 0.251521 | 2_1:+56391696 | Msa0213450:CDS |
| ATGGAGAGACAGACTGTATA+AGG | 0.270701 | 2_1:-56387569 | None:intergenic |
| GGTTGCCTTACCTATGTTAC+AGG | 0.275678 | 2_1:+56390458 | Msa0213450:CDS |
| CTTATCACTAATTCAAGAAT+TGG | 0.276956 | 2_1:+56388367 | Msa0213450:CDS |
| GGCCTGTGTTCTGTTATATT+TGG | 0.294184 | 2_1:+56391907 | Msa0213450:three_prime_UTR |
| TGGAGTTAATAGAATATATA+CGG | 0.295333 | 2_1:+56391982 | Msa0213450:three_prime_UTR |
| GTTGAAAGCTCAGCTTGTTT+TGG | 0.295459 | 2_1:-56391734 | None:intergenic |
| CAATGGAATGATGAATTCTA+TGG | 0.308120 | 2_1:-56387635 | None:intergenic |
| AATGATCGACGTAGCTGTTC+CGG | 0.311682 | 2_1:+56391687 | Msa0213450:CDS |
| CTATCTACTGTCCTATCAAC+AGG | 0.367153 | 2_1:-56388341 | None:intergenic |
| TCCGCATCCGCGTATTAATA+GGG | 0.378582 | 2_1:-56390528 | None:intergenic |
| CAGGGTGATAAAATCCGTTT+TGG | 0.379517 | 2_1:+56389735 | Msa0213450:CDS |
| AGTTGATTGACCCTGTTGAT+AGG | 0.384510 | 2_1:+56388330 | Msa0213450:intron |
| GTACATGCTGATCATGTTAC+TGG | 0.385443 | 2_1:+56388422 | Msa0213450:CDS |
| GGCAGATCTTTACGTAGAAC+AGG | 0.395453 | 2_1:+56389716 | Msa0213450:CDS |
| AGAATATATACGGAAATAAC+TGG | 0.397775 | 2_1:+56391992 | Msa0213450:three_prime_UTR |
| GGATAGAGTAAGGTATCTTT+AGG | 0.405587 | 2_1:-56390950 | None:intergenic |
| TTGATGATTATTGGCCTCAA+TGG | 0.421362 | 2_1:+56391881 | Msa0213450:three_prime_UTR |
| TTATGTTAACTTACAACTGC+TGG | 0.424997 | 2_1:-56387967 | None:intergenic |
| GCTGATCATGTTACTGGAAC+TGG | 0.430726 | 2_1:+56388428 | Msa0213450:CDS |
| AAATCAGTTACTTGAAATGC+TGG | 0.434716 | 2_1:+56392019 | Msa0213450:three_prime_UTR |
| AATGACGATGTTGTTGATGT+TGG | 0.435584 | 2_1:-56387677 | None:intergenic |
| TTATCACTAATTCAAGAATT+GGG | 0.439124 | 2_1:+56388368 | Msa0213450:CDS |
| TGGAGAGACAGACTGTATAA+GGG | 0.452811 | 2_1:-56387568 | None:intergenic |
| AAATATTAGAGAATAGAGAT+AGG | 0.453733 | 2_1:-56387720 | None:intergenic |
| CTGTAGGTTCGCGCAACTCC+CGG | 0.460561 | 2_1:+56390425 | Msa0213450:intron |
| GTTCCGGCTAATATGGTTTG+TGG | 0.461267 | 2_1:+56391703 | Msa0213450:CDS |
| GCAACTCCCGGTCATACCTT+AGG | 0.461527 | 2_1:+56390437 | Msa0213450:CDS |
| GTGAATGCCATTCGAGGTTG+AGG | 0.467892 | 2_1:-56390497 | None:intergenic |
| ATGACGATGTTGTTGATGTT+GGG | 0.479986 | 2_1:-56387676 | None:intergenic |
| ATTCGAGGTTGAGGTTGGTC+AGG | 0.482034 | 2_1:-56390488 | None:intergenic |
| AATTAAGCTCAAATCACAAA+TGG | 0.484321 | 2_1:+56387834 | Msa0213450:CDS |
| AGGTCCATCTCCTGTAACAT+AGG | 0.489230 | 2_1:-56390468 | None:intergenic |
| GTCATGAGCTGGATAGAGTA+AGG | 0.518190 | 2_1:-56390960 | None:intergenic |
| CATGGTGATGTTGTTTAACA+TGG | 0.521774 | 2_1:+56391775 | Msa0213450:three_prime_UTR |
| CTTACCTATGTTACAGGAGA+TGG | 0.522199 | 2_1:+56390464 | Msa0213450:CDS |
| AATCCTTTGTAGTCATGAGC+TGG | 0.527077 | 2_1:-56390971 | None:intergenic |
| ACCCTATTAATACGCGGATG+CGG | 0.527840 | 2_1:+56390527 | Msa0213450:CDS |
| TTCAAAAGCAAGTGGTGCAA+CGG | 0.535603 | 2_1:+56389695 | Msa0213450:CDS |
| AAGGCAACCTAAGGTATGAC+CGG | 0.536383 | 2_1:-56390444 | None:intergenic |
| TGATTTGAGCTTAATTGTAG+TGG | 0.542014 | 2_1:-56387827 | None:intergenic |
| GTATACATTGTGCATAGGAA+TGG | 0.545692 | 2_1:-56387593 | None:intergenic |
| GCGTATTAATAGGGTATCTC+CGG | 0.547462 | 2_1:-56390519 | None:intergenic |
| TATATACGGAAATAACTGGT+TGG | 0.549393 | 2_1:+56391996 | Msa0213450:three_prime_UTR |
| TATTAATACGCGGATGCGGA+AGG | 0.552808 | 2_1:+56390531 | Msa0213450:CDS |
| GATTATTGGCCTCAATGGTA+TGG | 0.556591 | 2_1:+56391886 | Msa0213450:three_prime_UTR |
| CATTGTGCATAGGAATGGAA+TGG | 0.559510 | 2_1:-56387588 | None:intergenic |
| TTAGGTAAGCACAGTTGGAG+AGG | 0.561821 | 2_1:+56391070 | Msa0213450:intron |
| TGACCAACCTCAACCTCGAA+TGG | 0.562289 | 2_1:+56390490 | Msa0213450:CDS |
| TACTGGAACTGGCCTCATCA+AGG | 0.563271 | 2_1:+56388439 | Msa0213450:CDS |
| ACCTCATCCTTTGTTAAGCG+CGG | 0.563453 | 2_1:-56391107 | None:intergenic |
| TCTGTTATTTCAAAAGCAAG+TGG | 0.564924 | 2_1:+56389687 | Msa0213450:CDS |
| CATCTCCTGTAACATAGGTA+AGG | 0.569527 | 2_1:-56390463 | None:intergenic |
| TCTCCGGTGAATGCCATTCG+AGG | 0.574709 | 2_1:-56390503 | None:intergenic |
| AACATAGGTAAGGCAACCTA+AGG | 0.574988 | 2_1:-56390453 | None:intergenic |
| ACTCCACAAACCATATTAGC+CGG | 0.586665 | 2_1:-56391706 | None:intergenic |
| AGATAGGAGATAAAAGAGAG+AGG | 0.589384 | 2_1:-56387704 | None:intergenic |
| TCCGCGCTTAACAAAGGATG+AGG | 0.590157 | 2_1:+56391106 | Msa0213450:CDS |
| ATGCCATTCGAGGTTGAGGT+TGG | 0.592927 | 2_1:-56390493 | None:intergenic |
| CATGTGAAGCATCAGCAAGA+AGG | 0.595346 | 2_1:-56387936 | None:intergenic |
| CAACCTCGAATGGCATTCAC+CGG | 0.598711 | 2_1:+56390500 | Msa0213450:CDS |
| GTATAATCCGCGCTTAACAA+AGG | 0.606464 | 2_1:+56391100 | Msa0213450:CDS |
| GGAAACTTTCAAGAACATCA+TGG | 0.608737 | 2_1:+56391508 | Msa0213450:intron |
| TTACTTGAAATGCTGGGCCA+TGG | 0.610171 | 2_1:+56392026 | Msa0213450:three_prime_UTR |
| AATCAGTTACTTGAAATGCT+GGG | 0.620012 | 2_1:+56392020 | Msa0213450:three_prime_UTR |
| ATTCTTGTCCGACAGTCGCA+TGG | 0.623218 | 2_1:+56391757 | Msa0213450:three_prime_UTR |
| CAACATCACCATGCGACTGT+CGG | 0.627794 | 2_1:-56391765 | None:intergenic |
| AGGCAACCTAAGGTATGACC+GGG | 0.633399 | 2_1:-56390443 | None:intergenic |
| TGTGTCTGTGAATATAACAA+TGG | 0.633632 | 2_1:-56387652 | None:intergenic |
| AGATTGTATACATTGTGCAT+AGG | 0.635220 | 2_1:-56387598 | None:intergenic |
| AACCAAATATAACAGAACAC+AGG | 0.653214 | 2_1:-56391909 | None:intergenic |
| GAATTGGGATTTAAGCATTG+TGG | 0.654567 | 2_1:-56387749 | None:intergenic |
| TATCCAGCTCATGACTACAA+AGG | 0.655933 | 2_1:+56390968 | Msa0213450:CDS |
| GAACACAGGCCATACCATTG+AGG | 0.656019 | 2_1:-56391895 | None:intergenic |
| GAATGATGAATTCTATGGAG+AGG | 0.657872 | 2_1:-56387630 | None:intergenic |
| GCATTCTACATACCTTGATG+AGG | 0.664282 | 2_1:-56388451 | None:intergenic |
| GGTGATGTTGTTTAACATGG+AGG | 0.701736 | 2_1:+56391778 | Msa0213450:three_prime_UTR |
| TATCTACTGTCCTATCAACA+GGG | 0.703833 | 2_1:-56388340 | None:intergenic |
| GCAGATCTTTACGTAGAACA+GGG | 0.714367 | 2_1:+56389717 | Msa0213450:CDS |
| GGAGATACCCTATTAATACG+CGG | 0.780547 | 2_1:+56390521 | Msa0213450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATGAAATATAATTAAATA+CGG | + | chr2_1:56390080-56390099 | Msa0213450:intron | 10.0% |
| !! | AAAAAAATATAAAATTGACA+AGG | - | chr2_1:56391564-56391583 | None:intergenic | 10.0% |
| !!! | TTATTTTTTGAATTTGATGA+TGG | + | chr2_1:56388049-56388068 | Msa0213450:intron | 15.0% |
| !!! | TATTTTTTGAATTTGATGAT+GGG | + | chr2_1:56388050-56388069 | Msa0213450:intron | 15.0% |
| !!! | TTATTTGTTGAATTGAATAA+TGG | + | chr2_1:56388175-56388194 | Msa0213450:intron | 15.0% |
| !!! | TATTTGTTGAATTGAATAAT+GGG | + | chr2_1:56388176-56388195 | Msa0213450:intron | 15.0% |
| !!! | GCTATTTTTATAAGATATAT+TGG | + | chr2_1:56388854-56388873 | Msa0213450:intron | 15.0% |
| !! | AGAAAAGTAATGTAAAATAT+TGG | - | chr2_1:56389600-56389619 | None:intergenic | 15.0% |
| !! | CAAACAATAAATATTAATCT+AGG | - | chr2_1:56389796-56389815 | None:intergenic | 15.0% |
| !! | TTAAAAAATTGCTTCTTTAT+TGG | + | chr2_1:56389906-56389925 | Msa0213450:intron | 15.0% |
| !! | TAAAAAATTGCTTCTTTATT+GGG | + | chr2_1:56389907-56389926 | Msa0213450:intron | 15.0% |
| !! | AGATTAATCTTAAACTAATA+CGG | + | chr2_1:56390191-56390210 | Msa0213450:intron | 15.0% |
| !! | TAAAATCGATAATAAGAATA+AGG | - | chr2_1:56390301-56390320 | None:intergenic | 15.0% |
| !! | AAAATAGATTAAGAAATTTC+TGG | + | chr2_1:56390859-56390878 | Msa0213450:intron | 15.0% |
| !!! | CATAAATGTACTATTATTTT+AGG | + | chr2_1:56391052-56391071 | Msa0213450:intron | 15.0% |
| !!! | GTAAATAAATTGATGATTAT+TGG | + | chr2_1:56391872-56391891 | Msa0213450:three_prime_UTR | 15.0% |
| !! | AAATATTAGAGAATAGAGAT+AGG | - | chr2_1:56387723-56387742 | None:intergenic | 20.0% |
| !! | TTATCACTAATTCAAGAATT+GGG | + | chr2_1:56388368-56388387 | Msa0213450:CDS | 20.0% |
| !! | TAAAACAATAATTTACCATC+AGG | - | chr2_1:56388478-56388497 | None:intergenic | 20.0% |
| !!! | TGTTTTAAACTTTACTCTAA+AGG | + | chr2_1:56388491-56388510 | Msa0213450:intron | 20.0% |
| !!! | TTTTTCACAATTTAAGTTTG+AGG | - | chr2_1:56388781-56388800 | None:intergenic | 20.0% |
| !! | ATCAAAATAGCTTATAGAAA+TGG | + | chr2_1:56388811-56388830 | Msa0213450:intron | 20.0% |
| !! | TATTCTGTTATAAGAGAAAA+AGG | - | chr2_1:56389346-56389365 | None:intergenic | 20.0% |
| !! | AAATAGATAGAAGTTATGAT+AGG | - | chr2_1:56389491-56389510 | None:intergenic | 20.0% |
| !!! | CTATTTCCTTAGATTTTTAT+TGG | + | chr2_1:56389505-56389524 | Msa0213450:intron | 20.0% |
| !! | AAAAAATTGCTTCTTTATTG+GGG | + | chr2_1:56389908-56389927 | Msa0213450:intron | 20.0% |
| !!! | ATTATCGATTTTAGATGAAA+TGG | + | chr2_1:56390308-56390327 | Msa0213450:intron | 20.0% |
| !!! | TTATCGATTTTAGATGAAAT+GGG | + | chr2_1:56390309-56390328 | Msa0213450:intron | 20.0% |
| !!! | ATCTTATTTTCTCTTATGAT+GGG | + | chr2_1:56390348-56390367 | Msa0213450:intron | 20.0% |
| !! | TATATCACACAATAAAATAG+AGG | - | chr2_1:56390628-56390647 | None:intergenic | 20.0% |
| !!! | CTATTTTATTGTGTGATATA+AGG | + | chr2_1:56390628-56390647 | Msa0213450:intron | 20.0% |
| !! | TGATGAATTTACAAAATATC+CGG | - | chr2_1:56390670-56390689 | None:intergenic | 20.0% |
| !! | TGGATTAAGCATATAAATTA+TGG | - | chr2_1:56391148-56391167 | None:intergenic | 20.0% |
| !! | ATATAAAATTGACAAGGTTT+AGG | - | chr2_1:56391558-56391577 | None:intergenic | 20.0% |
| !!! | ACATGTTCATTACTAATTTT+TGG | + | chr2_1:56391962-56391981 | Msa0213450:three_prime_UTR | 20.0% |
| !! | TGGAGTTAATAGAATATATA+CGG | + | chr2_1:56391982-56392001 | Msa0213450:three_prime_UTR | 20.0% |
| ! | ATTGAAAGAGAAGAAAAAGA+GGG | - | chr2_1:56387805-56387824 | None:intergenic | 25.0% |
| ! | AATTGAAAGAGAAGAAAAAG+AGG | - | chr2_1:56387806-56387825 | None:intergenic | 25.0% |
| ! | AATTAAGCTCAAATCACAAA+TGG | + | chr2_1:56387834-56387853 | Msa0213450:CDS | 25.0% |
| !! | ATTTGTGCGAAATTTTTATC+TGG | + | chr2_1:56388019-56388038 | Msa0213450:intron | 25.0% |
| !! | TTTGTGCGAAATTTTTATCT+GGG | + | chr2_1:56388020-56388039 | Msa0213450:intron | 25.0% |
| !! | TGTGAAAAAAGTGATTTTGA+AGG | + | chr2_1:56388110-56388129 | Msa0213450:intron | 25.0% |
| !! | GTGAAAAAAGTGATTTTGAA+GGG | + | chr2_1:56388111-56388130 | Msa0213450:intron | 25.0% |
| !!! | TTCAGTTGTTTTGATGATTT+TGG | + | chr2_1:56388244-56388263 | Msa0213450:intron | 25.0% |
| ! | CTTATCACTAATTCAAGAAT+TGG | + | chr2_1:56388367-56388386 | Msa0213450:CDS | 25.0% |
| ! | GTATAAACAAAAATCTTCAC+AGG | + | chr2_1:56388601-56388620 | Msa0213450:intron | 25.0% |
| !! | CAATTTTCACAAGCTTTTTA+CGG | - | chr2_1:56388898-56388917 | None:intergenic | 25.0% |
| !!! | GTGTATTGATTGATTGAAAA+TGG | + | chr2_1:56389173-56389192 | Msa0213450:intron | 25.0% |
| ! | CTTCACAGAAGAAAAAAAAA+AGG | + | chr2_1:56389198-56389217 | Msa0213450:intron | 25.0% |
| !! | ATCATTCTCCTGATTTTTAT+GGG | - | chr2_1:56389373-56389392 | None:intergenic | 25.0% |
| !! | TATCATTCTCCTGATTTTTA+TGG | - | chr2_1:56389374-56389393 | None:intergenic | 25.0% |
| ! | CAAACACCAATAAAAATCTA+AGG | - | chr2_1:56389514-56389533 | None:intergenic | 25.0% |
| ! | AGAATAAAGTGACTAAACAA+AGG | - | chr2_1:56389562-56389581 | None:intergenic | 25.0% |
| !!! | TTTACATTACTTTTCTGTAG+TGG | + | chr2_1:56389604-56389623 | Msa0213450:intron | 25.0% |
| !! | GAAATAACAGATTTTACATC+AGG | - | chr2_1:56389678-56389697 | None:intergenic | 25.0% |
| ! | CTAGAAAAATATCACCAAAA+CGG | - | chr2_1:56389752-56389771 | None:intergenic | 25.0% |
| !!! | TTTTGGTGATATTTTTCTAG+AGG | + | chr2_1:56389752-56389771 | Msa0213450:CDS | 25.0% |
| ! | TCATAATCTTCCTAATGTTA+GGG | - | chr2_1:56390063-56390082 | None:intergenic | 25.0% |
| ! | ATCATAATCTTCCTAATGTT+AGG | - | chr2_1:56390064-56390083 | None:intergenic | 25.0% |
| !!! | GATCTTATTTTCTCTTATGA+TGG | + | chr2_1:56390347-56390366 | Msa0213450:intron | 25.0% |
| ! | ATTCACATCAATTATTATGC+AGG | + | chr2_1:56390713-56390732 | Msa0213450:intron | 25.0% |
| ! | TTCACATCAATTATTATGCA+GGG | + | chr2_1:56390714-56390733 | Msa0213450:intron | 25.0% |
| !! | ATTACTCTTTCACATTTTTC+TGG | + | chr2_1:56390909-56390928 | Msa0213450:intron | 25.0% |
| !!! | GAAAGTAGAACTTTTAATTG+TGG | + | chr2_1:56391183-56391202 | Msa0213450:intron | 25.0% |
| !!! | GAATTTTGTTATGCTATATC+TGG | - | chr2_1:56391253-56391272 | None:intergenic | 25.0% |
| !!! | AGCATGTTAAAACGATTTTT+TGG | - | chr2_1:56391412-56391431 | None:intergenic | 25.0% |
| ! | TATGAGATATTACTGAGTTT+GGG | - | chr2_1:56391461-56391480 | None:intergenic | 25.0% |
| ! | ATATGAGATATTACTGAGTT+TGG | - | chr2_1:56391462-56391481 | None:intergenic | 25.0% |
| !! | TGATCTATTTTATCTGATGA+TGG | + | chr2_1:56391621-56391640 | Msa0213450:intron | 25.0% |
| !! | CATTTTTCTATTCAACACAA+AGG | - | chr2_1:56391842-56391861 | None:intergenic | 25.0% |
| ! | AGAATATATACGGAAATAAC+TGG | + | chr2_1:56391992-56392011 | Msa0213450:three_prime_UTR | 25.0% |
| AGATTGTATACATTGTGCAT+AGG | - | chr2_1:56387601-56387620 | None:intergenic | 30.0% | |
| CAATGGAATGATGAATTCTA+TGG | - | chr2_1:56387638-56387657 | None:intergenic | 30.0% | |
| TGTGTCTGTGAATATAACAA+TGG | - | chr2_1:56387655-56387674 | None:intergenic | 30.0% | |
| AGGGTTTATAAGGAAAAAAG+GGG | - | chr2_1:56387786-56387805 | None:intergenic | 30.0% | |
| GAGGGTTTATAAGGAAAAAA+GGG | - | chr2_1:56387787-56387806 | None:intergenic | 30.0% | |
| AGAGGGTTTATAAGGAAAAA+AGG | - | chr2_1:56387788-56387807 | None:intergenic | 30.0% | |
| GAAGAAAAAGAGGGTTTATA+AGG | - | chr2_1:56387796-56387815 | None:intergenic | 30.0% | |
| TGATTTGAGCTTAATTGTAG+TGG | - | chr2_1:56387830-56387849 | None:intergenic | 30.0% | |
| TTATGTTAACTTACAACTGC+TGG | - | chr2_1:56387970-56387989 | None:intergenic | 30.0% | |
| !!! | ATGATGGGTTTCTTCTATTT+TGG | + | chr2_1:56388065-56388084 | Msa0213450:intron | 30.0% |
| ! | ATTTGTGGGAAATTTTTACG+TGG | + | chr2_1:56388145-56388164 | Msa0213450:intron | 30.0% |
| ! | TTTGTGGGAAATTTTTACGT+GGG | + | chr2_1:56388146-56388165 | Msa0213450:intron | 30.0% |
| AACAAAAATCTTCACAGGAA+TGG | + | chr2_1:56388606-56388625 | Msa0213450:intron | 30.0% | |
| ! | ACATACCTTGATGATTACAT+TGG | + | chr2_1:56388654-56388673 | Msa0213450:intron | 30.0% |
| ACACCTATTATGACAACTTA+AGG | - | chr2_1:56388681-56388700 | None:intergenic | 30.0% | |
| !!! | ATAAGCTATTTTGATGACGT+TGG | + | chr2_1:56388744-56388763 | Msa0213450:intron | 30.0% |
| ! | TGATTTATATAGGGCTTGTT+TGG | - | chr2_1:56389001-56389020 | None:intergenic | 30.0% |
| AAACAAGCCCTATATAAATC+AGG | + | chr2_1:56389000-56389019 | Msa0213450:intron | 30.0% | |
| AACAAGCCCTATATAAATCA+GGG | + | chr2_1:56389001-56389020 | Msa0213450:intron | 30.0% | |
| ATACACCCCTGATTTATATA+GGG | - | chr2_1:56389010-56389029 | None:intergenic | 30.0% | |
| TATACACCCCTGATTTATAT+AGG | - | chr2_1:56389011-56389030 | None:intergenic | 30.0% | |
| GTATATATGTTTAGTAGCAC+TGG | + | chr2_1:56389026-56389045 | Msa0213450:intron | 30.0% | |
| ! | TTGAATGTAACAAGAAGTGT+CGG | - | chr2_1:56389116-56389135 | None:intergenic | 30.0% |
| CTGTTATAAGAGAAAAAGGA+GGG | - | chr2_1:56389342-56389361 | None:intergenic | 30.0% | |
| TCTGTTATAAGAGAAAAAGG+AGG | - | chr2_1:56389343-56389362 | None:intergenic | 30.0% | |
| ! | TCATTCTCCTGATTTTTATG+GGG | - | chr2_1:56389372-56389391 | None:intergenic | 30.0% |
| !! | TCTGTTATTTCAAAAGCAAG+TGG | + | chr2_1:56389687-56389706 | Msa0213450:CDS | 30.0% |
| ATAGGCAACAATGAAATGTA+GGG | - | chr2_1:56389961-56389980 | None:intergenic | 30.0% | |
| TATAGGCAACAATGAAATGT+AGG | - | chr2_1:56389962-56389981 | None:intergenic | 30.0% | |
| ATCTTAAACTAATACGGTGA+TGG | + | chr2_1:56390197-56390216 | Msa0213450:intron | 30.0% | |
| GTAAACTTTGTGCAAAGAAA+TGG | + | chr2_1:56390245-56390264 | Msa0213450:intron | 30.0% | |
| TTTGTGCAAAGAAATGGAAT+GGG | + | chr2_1:56390251-56390270 | Msa0213450:intron | 30.0% | |
| AAATGGGAAATTTGTGCAAA+TGG | + | chr2_1:56390325-56390344 | Msa0213450:intron | 30.0% | |
| AATATTGTCTTCATTGCTGT+AGG | + | chr2_1:56390409-56390428 | Msa0213450:intron | 30.0% | |
| TTACAAATCAATCCATTCAC+AGG | + | chr2_1:56390755-56390774 | Msa0213450:intron | 30.0% | |
| !!! | CAACTTTTTTCCTTTTTGAC+TGG | + | chr2_1:56390815-56390834 | Msa0213450:intron | 30.0% |
| GTTTAACATTCCAGTCAAAA+AGG | - | chr2_1:56390828-56390847 | None:intergenic | 30.0% | |
| ! | AGGAAACCTTTTATGGTTTT+TGG | + | chr2_1:56391001-56391020 | Msa0213450:intron | 30.0% |
| !!! | TTATTTTAGGTAAGCACAGT+TGG | + | chr2_1:56391065-56391084 | Msa0213450:intron | 30.0% |
| CTTTCATAAGTTTCGTTTAG+TGG | - | chr2_1:56391168-56391187 | None:intergenic | 30.0% | |
| !!! | TGTTAAAACGATTTTTTGGC+TGG | - | chr2_1:56391408-56391427 | None:intergenic | 30.0% |
| AACCAAATATAACAGAACAC+AGG | - | chr2_1:56391912-56391931 | None:intergenic | 30.0% | |
| TATATACGGAAATAACTGGT+TGG | + | chr2_1:56391996-56392015 | Msa0213450:three_prime_UTR | 30.0% | |
| AAATCAGTTACTTGAAATGC+TGG | + | chr2_1:56392019-56392038 | Msa0213450:three_prime_UTR | 30.0% | |
| AATCAGTTACTTGAAATGCT+GGG | + | chr2_1:56392020-56392039 | Msa0213450:three_prime_UTR | 30.0% | |
| GTATACATTGTGCATAGGAA+TGG | - | chr2_1:56387596-56387615 | None:intergenic | 35.0% | |
| GAATGATGAATTCTATGGAG+AGG | - | chr2_1:56387633-56387652 | None:intergenic | 35.0% | |
| ATGACGATGTTGTTGATGTT+GGG | - | chr2_1:56387679-56387698 | None:intergenic | 35.0% | |
| AATGACGATGTTGTTGATGT+TGG | - | chr2_1:56387680-56387699 | None:intergenic | 35.0% | |
| AGATAGGAGATAAAAGAGAG+AGG | - | chr2_1:56387707-56387726 | None:intergenic | 35.0% | |
| ! | GAATTGGGATTTAAGCATTG+TGG | - | chr2_1:56387752-56387771 | None:intergenic | 35.0% |
| GGGTTTATAAGGAAAAAAGG+GGG | - | chr2_1:56387785-56387804 | None:intergenic | 35.0% | |
| !! | GTTTCGTCAGCTTTTTGAAA+AGG | + | chr2_1:56387894-56387913 | Msa0213450:CDS | 35.0% |
| ! | TGCGAAATTTTTATCTGGGT+CGG | + | chr2_1:56388024-56388043 | Msa0213450:intron | 35.0% |
| AGGGTCTGTTTGATTATTTG+TGG | + | chr2_1:56388130-56388149 | Msa0213450:intron | 35.0% | |
| GGGTCTGTTTGATTATTTGT+GGG | + | chr2_1:56388131-56388150 | Msa0213450:intron | 35.0% | |
| TATCTACTGTCCTATCAACA+GGG | - | chr2_1:56388343-56388362 | None:intergenic | 35.0% | |
| AAAGGAAAGTGAGCAAGAAA+TGG | + | chr2_1:56388509-56388528 | Msa0213450:intron | 35.0% | |
| AAGGACCAATGTAATCATCA+AGG | - | chr2_1:56388662-56388681 | None:intergenic | 35.0% | |
| ! | GGTCCTTAAGTTGTCATAAT+AGG | + | chr2_1:56388675-56388694 | Msa0213450:intron | 35.0% |
| !! | TAAGTTTTGTGAGACGGTTT+GGG | - | chr2_1:56388945-56388964 | None:intergenic | 35.0% |
| !! | ATAAGTTTTGTGAGACGGTT+TGG | - | chr2_1:56388946-56388965 | None:intergenic | 35.0% |
| !! | CTGACATAAGTTTTGTGAGA+CGG | - | chr2_1:56388951-56388970 | None:intergenic | 35.0% |
| ACAAGCCCTATATAAATCAG+GGG | + | chr2_1:56389002-56389021 | Msa0213450:intron | 35.0% | |
| GAAACGAGAATTTAAACCTC+TGG | + | chr2_1:56389146-56389165 | Msa0213450:intron | 35.0% | |
| AAAGTTCGATAGAGACAGTT+AGG | - | chr2_1:56389300-56389319 | None:intergenic | 35.0% | |
| TATAAGAGAAAAAGGAGGGA+AGG | - | chr2_1:56389338-56389357 | None:intergenic | 35.0% | |
| AATATCCCCCCATAAAAATC+AGG | + | chr2_1:56389362-56389381 | Msa0213450:intron | 35.0% | |
| ! | ATTCTCCTGATTTTTATGGG+GGG | - | chr2_1:56389370-56389389 | None:intergenic | 35.0% |
| ! | CATTCTCCTGATTTTTATGG+GGG | - | chr2_1:56389371-56389390 | None:intergenic | 35.0% |
| ATACACACACAACTTCTAGA+AGG | - | chr2_1:56389426-56389445 | None:intergenic | 35.0% | |
| AAGTTGTGTGTGTATGTGTT+GGG | + | chr2_1:56389431-56389450 | Msa0213450:intron | 35.0% | |
| GAAGTTATGATAGGATGTCA+AGG | - | chr2_1:56389482-56389501 | None:intergenic | 35.0% | |
| ! | TTATTGGTGTTTGCGTATCA+CGG | + | chr2_1:56389521-56389540 | Msa0213450:intron | 35.0% |
| AATTGCTTCTTTATTGGGGT+TGG | + | chr2_1:56389912-56389931 | Msa0213450:intron | 35.0% | |
| ! | TCTTCCTAATGTTAGGGTTT+TGG | - | chr2_1:56390057-56390076 | None:intergenic | 35.0% |
| !! | TAAGATAAGAGCTCTGAATC+TGG | + | chr2_1:56390125-56390144 | Msa0213450:intron | 35.0% |
| CTTTGTGCAAAGAAATGGAA+TGG | + | chr2_1:56390250-56390269 | Msa0213450:intron | 35.0% | |
| !! | GAAGTTGTCTTTTGATTCAC+TGG | - | chr2_1:56390277-56390296 | None:intergenic | 35.0% |
| ACATCAATTATTATGCAGGG+TGG | + | chr2_1:56390717-56390736 | Msa0213450:intron | 35.0% | |
| CATCAATTATTATGCAGGGT+GGG | + | chr2_1:56390718-56390737 | Msa0213450:intron | 35.0% | |
| GGAATGTTAAACAGCAACTT+AGG | + | chr2_1:56390836-56390855 | Msa0213450:intron | 35.0% | |
| ! | GGATAGAGTAAGGTATCTTT+AGG | - | chr2_1:56390953-56390972 | None:intergenic | 35.0% |
| ACTACAAAGGATTCTCTGTA+AGG | + | chr2_1:56390981-56391000 | Msa0213450:intron | 35.0% | |
| ! | CTCTGTAAGGAAACCTTTTA+TGG | + | chr2_1:56390994-56391013 | Msa0213450:intron | 35.0% |
| TGGCAACCAAAAACCATAAA+AGG | - | chr2_1:56391010-56391029 | None:intergenic | 35.0% | |
| ! | AATGTTAATCGCTCTTTTGC+AGG | + | chr2_1:56391487-56391506 | Msa0213450:intron | 35.0% |
| GGAAACTTTCAAGAACATCA+TGG | + | chr2_1:56391508-56391527 | Msa0213450:intron | 35.0% | |
| ! | CATGGTGATGTTGTTTAACA+TGG | + | chr2_1:56391775-56391794 | Msa0213450:three_prime_UTR | 35.0% |
| ! | TTGATGATTATTGGCCTCAA+TGG | + | chr2_1:56391881-56391900 | Msa0213450:three_prime_UTR | 35.0% |
| CATTGTGCATAGGAATGGAA+TGG | - | chr2_1:56387591-56387610 | None:intergenic | 40.0% | |
| GGGGGTGAATTTGATGAATT+GGG | - | chr2_1:56387767-56387786 | None:intergenic | 40.0% | |
| AGGGGGTGAATTTGATGAAT+TGG | - | chr2_1:56387768-56387787 | None:intergenic | 40.0% | |
| ! | TGGGAAATTTTTACGTGGGT+CGG | + | chr2_1:56388150-56388169 | Msa0213450:intron | 40.0% |
| AGTTGATTGACCCTGTTGAT+AGG | + | chr2_1:56388330-56388349 | Msa0213450:intron | 40.0% | |
| CTATCTACTGTCCTATCAAC+AGG | - | chr2_1:56388344-56388363 | None:intergenic | 40.0% | |
| GTACATGCTGATCATGTTAC+TGG | + | chr2_1:56388422-56388441 | Msa0213450:CDS | 40.0% | |
| GCATTCTACATACCTTGATG+AGG | - | chr2_1:56388454-56388473 | None:intergenic | 40.0% | |
| !!! | CTATTTTGATGACGTTGGCT+AGG | + | chr2_1:56388749-56388768 | Msa0213450:intron | 40.0% |
| ACAAGAACACTGACACATGT+AGG | - | chr2_1:56389078-56389097 | None:intergenic | 40.0% | |
| CAATCAATACACAGTTCCAG+AGG | - | chr2_1:56389165-56389184 | None:intergenic | 40.0% | |
| GAAGTTGTGTGTGTATGTGT+TGG | + | chr2_1:56389430-56389449 | Msa0213450:intron | 40.0% | |
| TCTGTAGTGGTAACTCAGTT+TGG | + | chr2_1:56389617-56389636 | Msa0213450:intron | 40.0% | |
| TTCAAAAGCAAGTGGTGCAA+CGG | + | chr2_1:56389695-56389714 | Msa0213450:CDS | 40.0% | |
| GCAGATCTTTACGTAGAACA+GGG | + | chr2_1:56389717-56389736 | Msa0213450:CDS | 40.0% | |
| ! | CAGGGTGATAAAATCCGTTT+TGG | + | chr2_1:56389735-56389754 | Msa0213450:CDS | 40.0% |
| !! | TTTATTGGGGTTGGTTGACA+AGG | + | chr2_1:56389921-56389940 | Msa0213450:intron | 40.0% |
| GTTGCCTATAAGAGAAGAAG+TGG | + | chr2_1:56389972-56389991 | Msa0213450:intron | 40.0% | |
| AGAGCCACTTCTTCTCTTAT+AGG | - | chr2_1:56389979-56389998 | None:intergenic | 40.0% | |
| ! | GAAGTGGCTCTATTTATGCT+TGG | + | chr2_1:56389988-56390007 | Msa0213450:intron | 40.0% |
| ! | TGGCTCTATTTATGCTTGGA+CGG | + | chr2_1:56389992-56390011 | Msa0213450:intron | 40.0% |
| ! | AATCTGGTTAGTCAAGCAGA+TGG | + | chr2_1:56390141-56390160 | Msa0213450:intron | 40.0% |
| !! | TCTCTTATGATGGGTGTGAA+TGG | + | chr2_1:56390357-56390376 | Msa0213450:intron | 40.0% |
| AACATAGGTAAGGCAACCTA+AGG | - | chr2_1:56390456-56390475 | None:intergenic | 40.0% | |
| CATCTCCTGTAACATAGGTA+AGG | - | chr2_1:56390466-56390485 | None:intergenic | 40.0% | |
| CTTACCTATGTTACAGGAGA+TGG | + | chr2_1:56390464-56390483 | Msa0213450:CDS | 40.0% | |
| ! | GCGTATTAATAGGGTATCTC+CGG | - | chr2_1:56390522-56390541 | None:intergenic | 40.0% |
| GGAGATACCCTATTAATACG+CGG | + | chr2_1:56390521-56390540 | Msa0213450:CDS | 40.0% | |
| TCAGGTATCAATGTTGTGTC+CGG | + | chr2_1:56390562-56390581 | Msa0213450:intron | 40.0% | |
| GTTAAGTTCATGCCTGTGAA+TGG | - | chr2_1:56390770-56390789 | None:intergenic | 40.0% | |
| TATCCAGCTCATGACTACAA+AGG | + | chr2_1:56390968-56390987 | Msa0213450:CDS | 40.0% | |
| AATCCTTTGTAGTCATGAGC+TGG | - | chr2_1:56390974-56390993 | None:intergenic | 40.0% | |
| GTATAATCCGCGCTTAACAA+AGG | + | chr2_1:56391100-56391119 | Msa0213450:CDS | 40.0% | |
| CTCTTTGCACTAACAGTGTA+TGG | - | chr2_1:56391297-56391316 | None:intergenic | 40.0% | |
| TGAGTTTCTGTTTCATCTGC+TGG | + | chr2_1:56391431-56391450 | Msa0213450:intron | 40.0% | |
| ! | ACAGCTACGTCGATCATTTT+TGG | - | chr2_1:56391685-56391704 | None:intergenic | 40.0% |
| ACTCCACAAACCATATTAGC+CGG | - | chr2_1:56391709-56391728 | None:intergenic | 40.0% | |
| !!! | AAGCTCAGCTTGTTTTGGAT+TGG | - | chr2_1:56391732-56391751 | None:intergenic | 40.0% |
| !! | GTTGAAAGCTCAGCTTGTTT+TGG | - | chr2_1:56391737-56391756 | None:intergenic | 40.0% |
| ! | GGTGATGTTGTTTAACATGG+AGG | + | chr2_1:56391778-56391797 | Msa0213450:three_prime_UTR | 40.0% |
| ! | GATTATTGGCCTCAATGGTA+TGG | + | chr2_1:56391886-56391905 | Msa0213450:three_prime_UTR | 40.0% |
| GGCCTGTGTTCTGTTATATT+TGG | + | chr2_1:56391907-56391926 | Msa0213450:three_prime_UTR | 40.0% | |
| ! | CATGTGAAGCATCAGCAAGA+AGG | - | chr2_1:56387939-56387958 | None:intergenic | 45.0% |
| GCTGATCATGTTACTGGAAC+TGG | + | chr2_1:56388428-56388447 | Msa0213450:CDS | 45.0% | |
| GGTATGTAGAATGCACCTGA+TGG | + | chr2_1:56388460-56388479 | Msa0213450:intron | 45.0% | |
| !! | TTGATGACGTTGGCTAGGAT+AGG | + | chr2_1:56388754-56388773 | Msa0213450:intron | 45.0% |
| GTTTAGGAGCAATACTGCTC+TGG | - | chr2_1:56389261-56389280 | None:intergenic | 45.0% | |
| AGCAGTATTGCTCCTAAACC+AGG | + | chr2_1:56389262-56389281 | Msa0213450:intron | 45.0% | |
| AGAGAGATTCTGCCTGGTTT+AGG | - | chr2_1:56389277-56389296 | None:intergenic | 45.0% | |
| TAGAAGGTTGCAGAAGCAGA+GGG | - | chr2_1:56389410-56389429 | None:intergenic | 45.0% | |
| TGTGTATGTGTTGGGCTCAA+TGG | + | chr2_1:56389439-56389458 | Msa0213450:intron | 45.0% | |
| TATGTGTTGGGCTCAATGGT+TGG | + | chr2_1:56389443-56389462 | Msa0213450:intron | 45.0% | |
| ATGTGTTGGGCTCAATGGTT+GGG | + | chr2_1:56389444-56389463 | Msa0213450:intron | 45.0% | |
| TCAATGGTTGGGTCATCACA+TGG | + | chr2_1:56389455-56389474 | Msa0213450:intron | 45.0% | |
| GGCAGATCTTTACGTAGAAC+AGG | + | chr2_1:56389716-56389735 | Msa0213450:CDS | 45.0% | |
| GTCGCCAAAACCCTAACATT+AGG | + | chr2_1:56390050-56390069 | Msa0213450:intron | 45.0% | |
| AAGGCAACCTAAGGTATGAC+CGG | - | chr2_1:56390447-56390466 | None:intergenic | 45.0% | |
| GGTTGCCTTACCTATGTTAC+AGG | + | chr2_1:56390458-56390477 | Msa0213450:CDS | 45.0% | |
| AGGTCCATCTCCTGTAACAT+AGG | - | chr2_1:56390471-56390490 | None:intergenic | 45.0% | |
| ACCCTATTAATACGCGGATG+CGG | + | chr2_1:56390527-56390546 | Msa0213450:CDS | 45.0% | |
| TCCGCATCCGCGTATTAATA+GGG | - | chr2_1:56390531-56390550 | None:intergenic | 45.0% | |
| TTCCGCATCCGCGTATTAAT+AGG | - | chr2_1:56390532-56390551 | None:intergenic | 45.0% | |
| TATTAATACGCGGATGCGGA+AGG | + | chr2_1:56390531-56390550 | Msa0213450:CDS | 45.0% | |
| ! | ATGCGGAAGGACAGATTTTC+AGG | + | chr2_1:56390544-56390563 | Msa0213450:CDS | 45.0% |
| AGGCTGAGTTTCACTCTTAC+CGG | + | chr2_1:56390648-56390667 | Msa0213450:intron | 45.0% | |
| GTCATGAGCTGGATAGAGTA+AGG | - | chr2_1:56390963-56390982 | None:intergenic | 45.0% | |
| TTAGGTAAGCACAGTTGGAG+AGG | + | chr2_1:56391070-56391089 | Msa0213450:intron | 45.0% | |
| ACCTCATCCTTTGTTAAGCG+CGG | - | chr2_1:56391110-56391129 | None:intergenic | 45.0% | |
| TTAATTGTGGCGAGAGACTC+TGG | + | chr2_1:56391196-56391215 | Msa0213450:intron | 45.0% | |
| GGTTACACCATTGTCAATCG+CGG | - | chr2_1:56391387-56391406 | None:intergenic | 45.0% | |
| AATGATCGACGTAGCTGTTC+CGG | + | chr2_1:56391687-56391706 | Msa0213450:CDS | 45.0% | |
| GTTCCGGCTAATATGGTTTG+TGG | + | chr2_1:56391703-56391722 | Msa0213450:CDS | 45.0% | |
| TTACTTGAAATGCTGGGCCA+TGG | + | chr2_1:56392026-56392045 | Msa0213450:three_prime_UTR | 45.0% | |
| !!! | AAAATAAACTATATAAATTT+TGG | - | chr2_1:56391030-56391049 | None:intergenic | 5.0% |
| ! | TACTGGAACTGGCCTCATCA+AGG | + | chr2_1:56388439-56388458 | Msa0213450:CDS | 50.0% |
| !! | GTAACAAGAAGTGTCGGACG+CGG | - | chr2_1:56389110-56389129 | None:intergenic | 50.0% |
| !! | GTGTGGGAGTTCTAGAACTC+TGG | - | chr2_1:56389239-56389258 | None:intergenic | 50.0% |
| GAGCAATACTGCTCTGGTGT+GGG | - | chr2_1:56389255-56389274 | None:intergenic | 50.0% | |
| GTTAGGAGAGAGATTCTGCC+TGG | - | chr2_1:56389283-56389302 | None:intergenic | 50.0% | |
| CTAGAAGGTTGCAGAAGCAG+AGG | - | chr2_1:56389411-56389430 | None:intergenic | 50.0% | |
| AGGCAACCTAAGGTATGACC+GGG | - | chr2_1:56390446-56390465 | None:intergenic | 50.0% | |
| ! | ATTCGAGGTTGAGGTTGGTC+AGG | - | chr2_1:56390491-56390510 | None:intergenic | 50.0% |
| TGACCAACCTCAACCTCGAA+TGG | + | chr2_1:56390490-56390509 | Msa0213450:CDS | 50.0% | |
| ATGCCATTCGAGGTTGAGGT+TGG | - | chr2_1:56390496-56390515 | None:intergenic | 50.0% | |
| GTGAATGCCATTCGAGGTTG+AGG | - | chr2_1:56390500-56390519 | None:intergenic | 50.0% | |
| CAACCTCGAATGGCATTCAC+CGG | + | chr2_1:56390500-56390519 | Msa0213450:CDS | 50.0% | |
| TCCGCGCTTAACAAAGGATG+AGG | + | chr2_1:56391106-56391125 | Msa0213450:CDS | 50.0% | |
| GCTGTAGCGCTGTAGCATAA+TGG | + | chr2_1:56391332-56391351 | Msa0213450:intron | 50.0% | |
| TCGTGATCCGCGATTGACAA+TGG | + | chr2_1:56391377-56391396 | Msa0213450:intron | 50.0% | |
| CGTAGCTGTTCCGGCTAATA+TGG | + | chr2_1:56391696-56391715 | Msa0213450:CDS | 50.0% | |
| ATTCTTGTCCGACAGTCGCA+TGG | + | chr2_1:56391757-56391776 | Msa0213450:three_prime_UTR | 50.0% | |
| CAACATCACCATGCGACTGT+CGG | - | chr2_1:56391768-56391787 | None:intergenic | 50.0% | |
| GAACACAGGCCATACCATTG+AGG | - | chr2_1:56391898-56391917 | None:intergenic | 50.0% | |
| GGAGCAATACTGCTCTGGTG+TGG | - | chr2_1:56389256-56389275 | None:intergenic | 55.0% | |
| GCAACTCCCGGTCATACCTT+AGG | + | chr2_1:56390437-56390456 | Msa0213450:CDS | 55.0% | |
| TCTCCGGTGAATGCCATTCG+AGG | - | chr2_1:56390506-56390525 | None:intergenic | 55.0% | |
| GTCCGGTGTGTGTGTGTGTT+CGG | + | chr2_1:56390579-56390598 | Msa0213450:intron | 55.0% | |
| CACCGAACACACACACACAC+CGG | - | chr2_1:56390584-56390603 | None:intergenic | 55.0% | |
| !! | GCGTATCACGGTGTTGCGCA+TGG | + | chr2_1:56389533-56389552 | Msa0213450:intron | 60.0% |
| CTGTAGGTTCGCGCAACTCC+CGG | + | chr2_1:56390425-56390444 | Msa0213450:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 56387571 | 56392062 | 56387571 | ID=Msa0213450;Name=Msa0213450 |
| chr2_1 | mRNA | 56387571 | 56392062 | 56387571 | ID=Msa0213450-mRNA-1;Parent=Msa0213450;Name=Msa0213450-mRNA-1;_AED=0.19;_eAED=0.19;_QI=30|0.85|1|1|1|1|8|315|322 |
| chr2_1 | exon | 56387571 | 56387975 | 56387571 | ID=Msa0213450-mRNA-1:exon:15698;Parent=Msa0213450-mRNA-1 |
| chr2_1 | exon | 56388332 | 56388460 | 56388332 | ID=Msa0213450-mRNA-1:exon:15699;Parent=Msa0213450-mRNA-1 |
| chr2_1 | exon | 56389666 | 56389773 | 56389666 | ID=Msa0213450-mRNA-1:exon:15700;Parent=Msa0213450-mRNA-1 |
| chr2_1 | exon | 56390431 | 56390565 | 56390431 | ID=Msa0213450-mRNA-1:exon:15701;Parent=Msa0213450-mRNA-1 |
| chr2_1 | exon | 56390938 | 56390997 | 56390938 | ID=Msa0213450-mRNA-1:exon:15702;Parent=Msa0213450-mRNA-1 |
| chr2_1 | exon | 56391074 | 56391127 | 56391074 | ID=Msa0213450-mRNA-1:exon:15703;Parent=Msa0213450-mRNA-1 |
| chr2_1 | exon | 56391509 | 56391533 | 56391509 | ID=Msa0213450-mRNA-1:exon:15704;Parent=Msa0213450-mRNA-1 |
| chr2_1 | exon | 56391665 | 56392062 | 56391665 | ID=Msa0213450-mRNA-1:exon:15705;Parent=Msa0213450-mRNA-1 |
| chr2_1 | five_prime_UTR | 56387571 | 56387600 | 56387571 | ID=Msa0213450-mRNA-1:five_prime_utr;Parent=Msa0213450-mRNA-1 |
| chr2_1 | CDS | 56387601 | 56387975 | 56387601 | ID=Msa0213450-mRNA-1:cds;Parent=Msa0213450-mRNA-1 |
| chr2_1 | CDS | 56388332 | 56388460 | 56388332 | ID=Msa0213450-mRNA-1:cds;Parent=Msa0213450-mRNA-1 |
| chr2_1 | CDS | 56389666 | 56389773 | 56389666 | ID=Msa0213450-mRNA-1:cds;Parent=Msa0213450-mRNA-1 |
| chr2_1 | CDS | 56390431 | 56390565 | 56390431 | ID=Msa0213450-mRNA-1:cds;Parent=Msa0213450-mRNA-1 |
| chr2_1 | CDS | 56390938 | 56390997 | 56390938 | ID=Msa0213450-mRNA-1:cds;Parent=Msa0213450-mRNA-1 |
| chr2_1 | CDS | 56391074 | 56391127 | 56391074 | ID=Msa0213450-mRNA-1:cds;Parent=Msa0213450-mRNA-1 |
| chr2_1 | CDS | 56391509 | 56391533 | 56391509 | ID=Msa0213450-mRNA-1:cds;Parent=Msa0213450-mRNA-1 |
| chr2_1 | CDS | 56391665 | 56391747 | 56391665 | ID=Msa0213450-mRNA-1:cds;Parent=Msa0213450-mRNA-1 |
| chr2_1 | three_prime_UTR | 56391748 | 56392062 | 56391748 | ID=Msa0213450-mRNA-1:three_prime_utr;Parent=Msa0213450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
