AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0292960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0292960 MtrunA17_Chr2g0291061 97.797 227 4 1 1 227 1 226 4.11e-167 459
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0292960 AT3G52155.1 68.362 177 56 0 51 227 38 214 9.27e-88 258
Msa0292960 AT3G52155.3 68.362 177 56 0 51 227 38 214 9.27e-88 258
Msa0292960 AT3G52155.2 70.064 157 47 0 51 207 38 194 6.98e-78 233
Msa0292960 AT3G52155.4 66.667 153 51 0 75 227 13 165 1.03e-74 224

Find 109 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCCAACTGTTGGAGTTTA+AGG 0.105638 2_3:+42884728 None:intergenic
GTTTGGTGGGTGGAAGCTTC+AGG 0.157844 2_3:-42882393 Msa0292960:CDS
TTGGCGCGTAATCTGAAATT+AGG 0.161940 2_3:+42886033 None:intergenic
AACGCCACAAAATCTGAAAT+TGG 0.165377 2_3:-42886141 Msa0292960:five_prime_UTR
CGATCAGATTCTGTTTAATT+TGG 0.215936 2_3:-42882168 Msa0292960:three_prime_UTR
CATGTTGGCCCAACCCATTC+AGG 0.251434 2_3:+42881870 None:intergenic
GGGAATGAGGATTGAGGATT+TGG 0.289186 2_3:+42886014 None:intergenic
TTTAGCTTGGTGTCTTGTTT+GGG 0.296413 2_3:+42885994 None:intergenic
TGAAATGAGTGTCGACATAA+TGG 0.337985 2_3:-42886215 None:intergenic
ACAGGTGTATGGGACATAAC+AGG 0.362876 2_3:-42883833 Msa0292960:intron
TGGCGCGTAATCTGAAATTA+GGG 0.377016 2_3:+42886034 None:intergenic
ACCCAACTGTTGGAGTTTAA+GGG 0.387717 2_3:+42884729 None:intergenic
GACCGGCCTCTGAGCAAGTC+AGG 0.388964 2_3:-42884775 Msa0292960:CDS
TATTCGATTGCGGCCATGGA+TGG 0.389689 2_3:-42884505 Msa0292960:CDS
GGAAGAAAAGAAAGATGAAA+TGG 0.392144 2_3:+42881922 None:intergenic
CAGCGATGCGGCGCGGACTA+AGG 0.394869 2_3:-42884599 Msa0292960:CDS
TTCGCCATGCCGAAAGCTCC+TGG 0.397759 2_3:-42885930 Msa0292960:CDS
CTGACCAAACTGATGCGGTT+TGG 0.402071 2_3:+42882263 None:intergenic
CATTGCTGAGAGTAAATTGT+TGG 0.408833 2_3:-42882108 Msa0292960:three_prime_UTR
CTGGGTGGTATACAGGTGTA+TGG 0.413161 2_3:-42883844 Msa0292960:intron
TTTGGTGGGTGGAAGCTTCA+GGG 0.416035 2_3:-42882392 Msa0292960:CDS
TTTCTATTCGATTGCGGCCA+TGG 0.416515 2_3:-42884509 Msa0292960:CDS
ACTATAAATAATGCCCTGAA+TGG 0.420931 2_3:-42881884 Msa0292960:three_prime_UTR
ATCATCGCCGGAGCAACATT+CGG 0.422099 2_3:-42886059 Msa0292960:CDS
GCATTTGTAGCAGCAGGGTT+TGG 0.423367 2_3:-42882410 Msa0292960:CDS
CTGTTTAATTTGGCAGCAAT+GGG 0.425821 2_3:-42882158 Msa0292960:three_prime_UTR
TTGAAACTGCTGGGAAATCT+TGG 0.430976 2_3:-42883740 Msa0292960:CDS
ATCTTGACTAGCTAGCTACT+TGG 0.434900 2_3:+42882359 None:intergenic
AGCTTTCGGCATGGCGAAGA+AGG 0.435680 2_3:+42885935 None:intergenic
TGGTGTCTTGTTTGGGAATG+AGG 0.437396 2_3:+42886001 None:intergenic
TTACAGGCATTTGTAGCAGC+AGG 0.439671 2_3:-42882416 Msa0292960:intron
GAAATGAGTGTCGACATAAT+GGG 0.443284 2_3:-42886214 None:intergenic
TCTGTTTAATTTGGCAGCAA+TGG 0.443589 2_3:-42882159 Msa0292960:three_prime_UTR
TGCGTTGTGCAGATCATGAC+CGG 0.444184 2_3:-42884792 Msa0292960:intron
ACGCCACAAAATCTGAAATT+GGG 0.444273 2_3:-42886140 Msa0292960:five_prime_UTR
AGGTTATTTGTAAATATTCA+AGG 0.448646 2_3:-42884459 Msa0292960:CDS
GGAGCAAGTGCAGGAACTAC+TGG 0.451531 2_3:-42884557 Msa0292960:CDS
ATTTATAGTCTTCATAATCA+AGG 0.455797 2_3:+42881898 None:intergenic
GAATCCAAACCGCATCAGTT+TGG 0.456158 2_3:-42882267 Msa0292960:three_prime_UTR
TACCTAGATAGTATAAGTTC+AGG 0.461088 2_3:+42884700 None:intergenic
ACTAGGGAAAGCATACTAGA+TGG 0.463512 2_3:-42882217 Msa0292960:three_prime_UTR
AGGGTGTTCCCAGGAGCTTT+CGG 0.463517 2_3:+42885921 None:intergenic
TTTGTAGCAGCAGGGTTTGG+TGG 0.463635 2_3:-42882407 Msa0292960:CDS
TCCCTTAAACTCCAACAGTT+GGG 0.465044 2_3:-42884730 Msa0292960:CDS
CAGGTGTATGGGACATAACA+GGG 0.472104 2_3:-42883832 Msa0292960:CDS
TTGTAGCAGCAGGGTTTGGT+GGG 0.472254 2_3:-42882406 Msa0292960:CDS
GCTGCACTGCTTGAAACTGC+TGG 0.482315 2_3:-42883750 Msa0292960:CDS
TTAAACTCCAACAGTTGGGT+TGG 0.483442 2_3:-42884726 Msa0292960:CDS
CAAACCGCATCAGTTTGGTC+AGG 0.483881 2_3:-42882262 Msa0292960:three_prime_UTR
AATAATGCCCTGAATGGGTT+GGG 0.486565 2_3:-42881878 Msa0292960:three_prime_UTR
TAGCAGCAGGGTTTGGTGGG+TGG 0.487228 2_3:-42882403 Msa0292960:CDS
TTCCCTTAAACTCCAACAGT+TGG 0.489563 2_3:-42884731 Msa0292960:CDS
TCCCTGACTTGCTCAGAGGC+CGG 0.495787 2_3:+42884773 None:intergenic
CTATAAATAATGCCCTGAAT+GGG 0.496413 2_3:-42881883 Msa0292960:three_prime_UTR
CTTTACATTCTATACTAAGC+AGG 0.501853 2_3:+42882076 None:intergenic
AGATGCTCAAAAGATAAAGT+TGG 0.502518 2_3:-42882311 Msa0292960:three_prime_UTR
ATCTGCGGTTTGCCCATCCA+TGG 0.505525 2_3:+42884492 None:intergenic
AAGGATGAGGCGGCGAGAGA+TGG 0.508749 2_3:+42885954 None:intergenic
AAATAATGCCCTGAATGGGT+TGG 0.509170 2_3:-42881879 Msa0292960:three_prime_UTR
TGCTGGGAAATCTTGGAATG+AGG 0.511570 2_3:-42883733 Msa0292960:intron
AGGCAGCTTCAATGTTCTGT+GGG 0.514195 2_3:-42883800 Msa0292960:CDS
AAAGCATACTAGATGGAAGA+TGG 0.515770 2_3:-42882210 Msa0292960:three_prime_UTR
CGAGAGATGGAATCTGAGAA+AGG 0.516129 2_3:+42885967 None:intergenic
TTCCTGAACTTATACTATCT+AGG 0.516546 2_3:-42884702 Msa0292960:intron
ATGTTGGCCCAACCCATTCA+GGG 0.521865 2_3:+42881871 None:intergenic
GGCGATGATTGAGGTGGTGG+TGG 0.532803 2_3:+42886073 None:intergenic
ATTCGATTGCGGCCATGGAT+GGG 0.533929 2_3:-42884504 Msa0292960:CDS
AACCGCAGATCACCTTCAAA+AGG 0.534911 2_3:-42884479 Msa0292960:CDS
TTGTTTGGGAATGAGGATTG+AGG 0.539065 2_3:+42886008 None:intergenic
GGTTATTTGTAAATATTCAA+GGG 0.542148 2_3:-42884458 Msa0292960:CDS
TAGGGTTCCGAATGTTGCTC+CGG 0.545131 2_3:+42886052 None:intergenic
TCCGGCGATGATTGAGGTGG+TGG 0.546028 2_3:+42886070 None:intergenic
CGGCATGGCGAAGAAGGATG+AGG 0.548351 2_3:+42885941 None:intergenic
GATAATGCAGGAGCAAGTGC+AGG 0.552707 2_3:-42884566 Msa0292960:CDS
TCGGAGTGAAGGGTGTTCCC+AGG 0.553061 2_3:+42885912 None:intergenic
ATTGCTCAGAGCTCATGACT+AGG 0.557619 2_3:-42882234 Msa0292960:three_prime_UTR
TTCTAGTTTCTATTCGATTG+CGG 0.559298 2_3:-42884515 Msa0292960:CDS
CTGCACTGCTTGAAACTGCT+GGG 0.562340 2_3:-42883749 Msa0292960:CDS
TCGCCATGCCGAAAGCTCCT+GGG 0.562778 2_3:-42885929 Msa0292960:CDS
GTGGTGGAAAGGTGAATTGA+CGG 0.563324 2_3:+42886089 None:intergenic
ACCACCACCTCAATCATCGC+CGG 0.572284 2_3:-42886071 Msa0292960:CDS
GCCTCTGAGCAAGTCAGGGA+AGG 0.572835 2_3:-42884770 Msa0292960:CDS
CAGGAATCCAACCCAACTGT+TGG 0.577443 2_3:+42884719 None:intergenic
AAATGAGTGTCGACATAATG+GGG 0.577838 2_3:-42886213 None:intergenic
GGAGACACTCAAGATAATGC+AGG 0.579263 2_3:-42884578 Msa0292960:CDS
GTTCCCAGGAGCTTTCGGCA+TGG 0.591646 2_3:+42885926 None:intergenic
TGTTGCTCCGGCGATGATTG+AGG 0.595491 2_3:+42886064 None:intergenic
GAGGCAGCTTCAATGTTCTG+TGG 0.596736 2_3:-42883801 Msa0292960:CDS
TACAGGCATTTGTAGCAGCA+GGG 0.598227 2_3:-42882415 Msa0292960:intron
TGATTGAGGTGGTGGTGGAA+AGG 0.598567 2_3:+42886078 None:intergenic
TTGCTCAGAGCTCATGACTA+GGG 0.604327 2_3:-42882233 Msa0292960:three_prime_UTR
ACCGGCCTCTGAGCAAGTCA+GGG 0.610703 2_3:-42884774 Msa0292960:CDS
TCCTTCCCTGACTTGCTCAG+AGG 0.611844 2_3:+42884769 None:intergenic
AAACCGCATCAGTTTGGTCA+GGG 0.619812 2_3:-42882261 Msa0292960:three_prime_UTR
TGTTGCTTGCGACAGCGATG+CGG 0.634432 2_3:-42884611 Msa0292960:intron
TGGGTGGTATACAGGTGTAT+GGG 0.636985 2_3:-42883843 Msa0292960:intron
CTTGCGACAGCGATGCGGCG+CGG 0.643944 2_3:-42884606 Msa0292960:intron
TATAGTCTTCATAATCAAGG+TGG 0.658236 2_3:+42881901 None:intergenic
CATGGCGAAGAAGGATGAGG+CGG 0.664817 2_3:+42885944 None:intergenic
CAACAGCACAAAGCAAACCA+AGG 0.673297 2_3:-42886168 Msa0292960:five_prime_UTR
ACACCCTGACCAAACTGATG+CGG 0.673309 2_3:+42882258 None:intergenic
TGAATTGACGGTGCTGCATG+TGG 0.678087 2_3:+42886101 None:intergenic
TGGGAACACCCTTCACTCCG+AGG 0.679013 2_3:-42885910 Msa0292960:intron
GCAGGAACTACTGGACGCTG+AGG 0.682648 2_3:-42884548 Msa0292960:CDS
AGGTGTATGGGACATAACAG+GGG 0.695498 2_3:-42883831 Msa0292960:CDS
GGCAGCTTCAATGTTCTGTG+GGG 0.711403 2_3:-42883799 Msa0292960:CDS
TGCTCCGGCGATGATTGAGG+TGG 0.724852 2_3:+42886067 None:intergenic
AATGAGTGTCGACATAATGG+GGG 0.732885 2_3:-42886212 None:intergenic
GGTGTATGGGACATAACAGG+GGG 0.748399 2_3:-42883830 Msa0292960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATTTATAATCTTGT+TGG + chr2_3:42884596-42884615 None:intergenic 10.0%
!!! CAAGATTATAAATTTATTTT+TGG - chr2_3:42884597-42884616 Msa0292960:CDS 10.0%
!!! GTCTGAAATTTTATTTAATT+AGG - chr2_3:42882736-42882755 Msa0292960:intron 15.0%
!! TGTTAAAACTTAATACTTTA+TGG + chr2_3:42883116-42883135 None:intergenic 15.0%
!! TGTTAAAACTTAATACTTTA+TGG + chr2_3:42883116-42883135 None:intergenic 15.0%
!! ATTACATTAATAAGATTTGA+TGG - chr2_3:42884205-42884224 Msa0292960:intron 15.0%
!! ACAAATTAACTTCTAATTAT+AGG - chr2_3:42884552-42884571 Msa0292960:CDS 15.0%
!!! ATTCTTATTGATTAATGAAT+TGG - chr2_3:42885057-42885076 Msa0292960:intron 15.0%
!! TAAAATATTACTCAATCAAA+AGG + chr2_3:42885528-42885547 None:intergenic 15.0%
!!! TTTGATTGAGTAATATTTTA+AGG - chr2_3:42885528-42885547 Msa0292960:intron 15.0%
!!! TTGATTGAGTAATATTTTAA+GGG - chr2_3:42885529-42885548 Msa0292960:intron 15.0%
!! CTTTAATTCCAAAAAATGAA+GGG + chr2_3:42882206-42882225 None:intergenic 20.0%
!! ACTTTAATTCCAAAAAATGA+AGG + chr2_3:42882207-42882226 None:intergenic 20.0%
!! GTTTCAAACTTTATTCAATT+AGG - chr2_3:42882225-42882244 Msa0292960:three_prime_UTR 20.0%
!! TTTACACTAAATTCGTTAAA+CGG + chr2_3:42882258-42882277 None:intergenic 20.0%
!! AATTTAGTGTAAATTGAAAC+TGG - chr2_3:42882265-42882284 Msa0292960:three_prime_UTR 20.0%
!!! TTGACTTTATTTTTTCCTTT+TGG - chr2_3:42882531-42882550 Msa0292960:intron 20.0%
!!! AATTAAGTTGTTTATCCAAA+CGG - chr2_3:42882597-42882616 Msa0292960:intron 20.0%
!!! ATGAAAATGTTTTGTTTGTT+TGG - chr2_3:42882689-42882708 Msa0292960:intron 20.0%
!! TTATTTAATTAGGAATGTTC+CGG - chr2_3:42882746-42882765 Msa0292960:intron 20.0%
!! AATTGAAACATGTTATGTTA+TGG - chr2_3:42882788-42882807 Msa0292960:intron 20.0%
!! GAGTTAAAATAATGTCAAAT+TGG + chr2_3:42883039-42883058 None:intergenic 20.0%
!!! ATTTACAAATAACCTTTTGA+AGG + chr2_3:42883618-42883637 None:intergenic 20.0%
!! AGGTTATTTGTAAATATTCA+AGG - chr2_3:42883623-42883642 Msa0292960:intron 20.0%
!! GGTTATTTGTAAATATTCAA+GGG - chr2_3:42883624-42883643 Msa0292960:intron 20.0%
!! AATTTAGAAACCAACATAAA+AGG + chr2_3:42883694-42883713 None:intergenic 20.0%
!! TCTTTATTATCTTTGTATGA+AGG - chr2_3:42883713-42883732 Msa0292960:intron 20.0%
!! AATAACTATTTAAATCGAGA+TGG + chr2_3:42884113-42884132 None:intergenic 20.0%
!! ATTGTTGGAAAAAGAATAAA+GGG + chr2_3:42884142-42884161 None:intergenic 20.0%
!! TATTGTTGGAAAAAGAATAA+AGG + chr2_3:42884143-42884162 None:intergenic 20.0%
!! AGCAAATAAAAAGATATTGT+TGG + chr2_3:42884157-42884176 None:intergenic 20.0%
!!! TATTTTTGGAATGTTTTTTG+TGG - chr2_3:42884611-42884630 Msa0292960:intron 20.0%
!! GAAGATGATAAAATGATAAT+AGG - chr2_3:42884870-42884889 Msa0292960:intron 20.0%
!! TGATTAATGAATTGGAAAAT+TGG - chr2_3:42885065-42885084 Msa0292960:intron 20.0%
!!! CACTAATAAGGTTTTATTTT+AGG + chr2_3:42885355-42885374 None:intergenic 20.0%
!! TCAAATCTTATTATCATGAT+AGG + chr2_3:42885479-42885498 None:intergenic 20.0%
!!! TGATTGAGTAATATTTTAAG+GGG - chr2_3:42885530-42885549 Msa0292960:intron 20.0%
!! ATTTATAGTCTTCATAATCA+AGG + chr2_3:42886187-42886206 None:intergenic 20.0%
!!! TAAAAAAGCCCTTCATTTTT+TGG - chr2_3:42882195-42882214 Msa0292960:three_prime_UTR 25.0%
! TTACACTAAATTCGTTAAAC+GGG + chr2_3:42882257-42882276 None:intergenic 25.0%
! AATTGAAACTGGTTATGTTA+TGG - chr2_3:42882276-42882295 Msa0292960:three_prime_UTR 25.0%
! TTCTAGATAAAACAAGTAGT+GGG - chr2_3:42882306-42882325 Msa0292960:three_prime_UTR 25.0%
!! AATAAGTTGAAAACAGCTTA+TGG + chr2_3:42882454-42882473 None:intergenic 25.0%
! AGGAAAAAATAAAGTCAAAC+TGG + chr2_3:42882529-42882548 None:intergenic 25.0%
!!! TTTTCCTTTTGGTATTGAAA+TGG - chr2_3:42882542-42882561 Msa0292960:intron 25.0%
! TAAACCATTTCAATACCAAA+AGG + chr2_3:42882549-42882568 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+GGG - chr2_3:42882598-42882617 Msa0292960:intron 25.0%
! TAACATGAGTGTTAAAGTTT+GGG + chr2_3:42882634-42882653 None:intergenic 25.0%
! ATAACATGAGTGTTAAAGTT+TGG + chr2_3:42882635-42882654 None:intergenic 25.0%
!!! TTTTGTTTGTTTGGTGTAAA+TGG - chr2_3:42882698-42882717 Msa0292960:intron 25.0%
! TTAAATAAGTCAATCCAAAC+CGG + chr2_3:42882363-42882382 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr2_3:42882598-42882617 Msa0292960:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - chr2_3:42883090-42883109 Msa0292960:intron 25.0%
! CACACAAACATTATTAACAT+GGG + chr2_3:42883139-42883158 None:intergenic 25.0%
! ACACACAAACATTATTAACA+TGG + chr2_3:42883140-42883159 None:intergenic 25.0%
! CACACAAACATTATTAACAT+GGG + chr2_3:42883139-42883158 None:intergenic 25.0%
! ACACACAAACATTATTAACA+TGG + chr2_3:42883140-42883159 None:intergenic 25.0%
!!! TTTTATCTAGCCTTTTATGT+TGG - chr2_3:42883681-42883700 Msa0292960:intron 25.0%
! TTATTATCTTTGTATGAAGG+TGG - chr2_3:42883716-42883735 Msa0292960:intron 25.0%
!!! ACATTGTTTTGTTTTTCCAT+AGG + chr2_3:42883786-42883805 None:intergenic 25.0%
! TATGGAAAAACAAAACAATG+TGG - chr2_3:42883785-42883804 Msa0292960:CDS 25.0%
! GAGAAATCAGATGTTAAATA+TGG - chr2_3:42883863-42883882 Msa0292960:intron 25.0%
! TGTTAAATATGGACATTTAG+TGG - chr2_3:42883874-42883893 Msa0292960:intron 25.0%
!! CTTCATAAAAGTATAAACTG+AGG + chr2_3:42884465-42884484 None:intergenic 25.0%
! TTAGAATGTTCAAGGTTTAT+CGG + chr2_3:42884809-42884828 None:intergenic 25.0%
! AAGTTGAAACAGTTATGTAT+AGG + chr2_3:42884979-42884998 None:intergenic 25.0%
! AAAAATATTAGAAACCGTGA+AGG + chr2_3:42885016-42885035 None:intergenic 25.0%
!!! CGGTTTCTAATATTTTTACA+TGG - chr2_3:42885019-42885038 Msa0292960:intron 25.0%
! TTCCATCATACATGTTATAA+TGG - chr2_3:42885102-42885121 Msa0292960:intron 25.0%
! AACCATTATAACATGTATGA+TGG + chr2_3:42885107-42885126 None:intergenic 25.0%
! CATACATGTTATAATGGTTT+AGG - chr2_3:42885108-42885127 Msa0292960:intron 25.0%
! GCTTAAAAGGTAAAATATCA+AGG + chr2_3:42885333-42885352 None:intergenic 25.0%
!!! GGTTTTATTTTAGGCTTAAA+AGG + chr2_3:42885346-42885365 None:intergenic 25.0%
! TAAAACCTTATTAGTGTAAC+TGG - chr2_3:42885359-42885378 Msa0292960:intron 25.0%
! ATATTATGTAAGCTTCCAAA+AGG - chr2_3:42885592-42885611 Msa0292960:intron 25.0%
!! AAATCGAATACTTTTCCTTT+TGG + chr2_3:42885610-42885629 None:intergenic 25.0%
!!! TTAGATACACAACTTTTTCT+CGG + chr2_3:42885637-42885656 None:intergenic 25.0%
!! TATTAGCAAGATTTTCAGTA+TGG + chr2_3:42885752-42885771 None:intergenic 25.0%
! ATACCCAATTTCAGATTTTG+TGG + chr2_3:42881948-42881967 None:intergenic 30.0%
! GTTCTAGATAAAACAAGTAG+TGG - chr2_3:42882305-42882324 Msa0292960:three_prime_UTR 30.0%
TCCAAATAGCACAAAACAAA+AGG + chr2_3:42882332-42882351 None:intergenic 30.0%
!!! TTTTGTGCTATTTGGAATGT+AGG - chr2_3:42882336-42882355 Msa0292960:three_prime_UTR 30.0%
!! TTTGTGCTATTTGGAATGTA+GGG - chr2_3:42882337-42882356 Msa0292960:three_prime_UTR 30.0%
AAGCTAACACATAGAACTTA+TGG + chr2_3:42882478-42882497 None:intergenic 30.0%
! TGTTAAAGTTTGGGACTTTA+AGG + chr2_3:42882625-42882644 None:intergenic 30.0%
TTCTACGTAAAACAAGTAGT+GGG - chr2_3:42882818-42882837 Msa0292960:intron 30.0%
AATAAGCTGAAAACAGCTTA+TGG + chr2_3:42882962-42882981 None:intergenic 30.0%
! GTATTGTCGTTTGATGTTAA+TGG - chr2_3:42883250-42883269 Msa0292960:intron 30.0%
TTCCTGAACTTATACTATCT+AGG - chr2_3:42883380-42883399 Msa0292960:intron 30.0%
TACCTAGATAGTATAAGTTC+AGG + chr2_3:42883385-42883404 None:intergenic 30.0%
TGAACTTATACTATCTAGGT+AGG - chr2_3:42883384-42883403 Msa0292960:intron 30.0%
GAACTTATACTATCTAGGTA+GGG - chr2_3:42883385-42883404 Msa0292960:intron 30.0%
!! TTCTAGTTTCTATTCGATTG+CGG - chr2_3:42883567-42883586 Msa0292960:intron 30.0%
AAAATGCTATATTTGCAGAG+TGG - chr2_3:42883830-42883849 Msa0292960:CDS 30.0%
! CTCTAAAAGTTCATAACAGA+TGG + chr2_3:42883942-42883961 None:intergenic 30.0%
! CATCTGTTATGAACTTTTAG+AGG - chr2_3:42883940-42883959 Msa0292960:intron 30.0%
! TTTTCAACTTTTCAACGCTA+TGG - chr2_3:42883968-42883987 Msa0292960:intron 30.0%
!! GACGTTGATTCATTAAGTAT+AGG + chr2_3:42884091-42884110 None:intergenic 30.0%
! ATTTGATGGATATTTGATGC+TGG - chr2_3:42884219-42884238 Msa0292960:intron 30.0%
! TTTGATGGATATTTGATGCT+GGG - chr2_3:42884220-42884239 Msa0292960:intron 30.0%
!!! GTGTATTCTTGTTCCTTTTT+TGG - chr2_3:42884713-42884732 Msa0292960:CDS 30.0%
AGTCAACCAATATTTACCAT+TGG - chr2_3:42884740-42884759 Msa0292960:CDS 30.0%
GTCAACCAATATTTACCATT+GGG - chr2_3:42884741-42884760 Msa0292960:CDS 30.0%
ATTGTGATGTGTGAAATTTG+AGG + chr2_3:42884836-42884855 None:intergenic 30.0%
CAAATTTCACACATCACAAT+TGG - chr2_3:42884836-42884855 Msa0292960:intron 30.0%
AGTTATGTATAGGTCATGAA+TGG + chr2_3:42884969-42884988 None:intergenic 30.0%
ACATAACTGTTTCAACTTTG+AGG - chr2_3:42884981-42885000 Msa0292960:intron 30.0%
AGAAACTTCCTTGTAAAACT+TGG - chr2_3:42885211-42885230 Msa0292960:intron 30.0%
AAGGTAAAATATCAAGGCTT+GGG + chr2_3:42885327-42885346 None:intergenic 30.0%
AAAGGTAAAATATCAAGGCT+TGG + chr2_3:42885328-42885347 None:intergenic 30.0%
AAGTTCCAGTTACACTAATA+AGG + chr2_3:42885367-42885386 None:intergenic 30.0%
TCTCATTGATATCCTTTCTT+GGG + chr2_3:42885421-42885440 None:intergenic 30.0%
ATCTCATTGATATCCTTTCT+TGG + chr2_3:42885422-42885441 None:intergenic 30.0%
TATCTAACATTGCATCTTAC+AGG - chr2_3:42885650-42885669 Msa0292960:intron 30.0%
AGATGCTCAAAAGATAAAGT+TGG - chr2_3:42885771-42885790 Msa0292960:intron 30.0%
!! GAAGCATCATTGCTTATTTT+AGG - chr2_3:42885793-42885812 Msa0292960:intron 30.0%
CGATCAGATTCTGTTTAATT+TGG - chr2_3:42885914-42885933 Msa0292960:CDS 30.0%
CTTTACATTCTATACTAAGC+AGG + chr2_3:42886009-42886028 None:intergenic 30.0%
GGAAGAAAAGAAAGATGAAA+TGG + chr2_3:42886163-42886182 None:intergenic 30.0%
TATAGTCTTCATAATCAAGG+TGG + chr2_3:42886184-42886203 None:intergenic 30.0%
ACTATAAATAATGCCCTGAA+TGG - chr2_3:42886198-42886217 Msa0292960:five_prime_UTR 30.0%
CTATAAATAATGCCCTGAAT+GGG - chr2_3:42886199-42886218 Msa0292960:five_prime_UTR 30.0%
! ATTTTGTGGCGTTAAATCCT+TGG + chr2_3:42881934-42881953 None:intergenic 35.0%
! AACGCCACAAAATCTGAAAT+TGG - chr2_3:42881941-42881960 Msa0292960:three_prime_UTR 35.0%
! ACGCCACAAAATCTGAAATT+GGG - chr2_3:42881942-42881961 Msa0292960:three_prime_UTR 35.0%
!! TTTAGCTTGGTGTCTTGTTT+GGG + chr2_3:42882091-42882110 None:intergenic 35.0%
!!! TTTTAGCTTGGTGTCTTGTT+TGG + chr2_3:42882092-42882111 None:intergenic 35.0%
!!! AATGAAGGGCTTTTTTACCT+CGG + chr2_3:42882192-42882211 None:intergenic 35.0%
!!! GCCTTTTGTTTTGTGCTATT+TGG - chr2_3:42882328-42882347 Msa0292960:three_prime_UTR 35.0%
! TTTGGAATGTAGGGTATGTT+TGG - chr2_3:42882346-42882365 Msa0292960:three_prime_UTR 35.0%
!! TGTTTGTTTGGTGTAAATGG+AGG - chr2_3:42882701-42882720 Msa0292960:intron 35.0%
ATTAGGAATGTTCCGGTTTA+AGG - chr2_3:42882753-42882772 Msa0292960:intron 35.0%
GTTCTACGTAAAACAAGTAG+TGG - chr2_3:42882817-42882836 Msa0292960:intron 35.0%
!! CTTTGTGCTATTTCAAGTGT+AGG - chr2_3:42882848-42882867 Msa0292960:intron 35.0%
! TGACTAATTCTGAGAGCTAA+TGG - chr2_3:42882918-42882937 Msa0292960:intron 35.0%
TAATACTTTATGGCCCTGTT+TGG + chr2_3:42883106-42883125 None:intergenic 35.0%
TAATACTTTATGGCCCTGTT+TGG + chr2_3:42883106-42883125 None:intergenic 35.0%
! TTGTCGTTTGATGTTAATGG+AGG - chr2_3:42883253-42883272 Msa0292960:intron 35.0%
TTATCTTTGTATGAAGGTGG+AGG - chr2_3:42883719-42883738 Msa0292960:intron 35.0%
! TGTTTTTCCATAGGTTGCTT+GGG + chr2_3:42883777-42883796 None:intergenic 35.0%
!! TTGTTTTTCCATAGGTTGCT+TGG + chr2_3:42883778-42883797 None:intergenic 35.0%
CTGAAACGCAACTCAAAATT+TGG - chr2_3:42883992-42884011 Msa0292960:intron 35.0%
GAAGAACATCCAATGTTTGT+AGG - chr2_3:42884028-42884047 Msa0292960:intron 35.0%
TTAATGTACACAGTTGTGCA+AGG + chr2_3:42884388-42884407 None:intergenic 35.0%
AAGATCACACAGAAACTGTA+TGG - chr2_3:42884501-42884520 Msa0292960:CDS 35.0%
AGATCACACAGAAACTGTAT+GGG - chr2_3:42884502-42884521 Msa0292960:CDS 35.0%
!! ACTCCTAACACAGTTTTGTA+GGG + chr2_3:42884691-42884710 None:intergenic 35.0%
GACATCCCAATGGTAAATAT+TGG + chr2_3:42884749-42884768 None:intergenic 35.0%
GAGGTAAGTTAGAATGTTCA+AGG + chr2_3:42884817-42884836 None:intergenic 35.0%
ACATGAAGCTAGAAGTCATA+AGG + chr2_3:42885139-42885158 None:intergenic 35.0%
CATGTGGGTACTAACAAATA+GGG + chr2_3:42885165-42885184 None:intergenic 35.0%
ACATGTGGGTACTAACAAAT+AGG + chr2_3:42885166-42885185 None:intergenic 35.0%
! TACTGGAACCAAGTTTTACA+AGG + chr2_3:42885222-42885241 None:intergenic 35.0%
GGTTCCAGTAACTTCAATTA+CGG - chr2_3:42885232-42885251 Msa0292960:intron 35.0%
TTGGGGGACTAATCATATAA+GGG + chr2_3:42885309-42885328 None:intergenic 35.0%
AGGTAAAATATCAAGGCTTG+GGG + chr2_3:42885326-42885345 None:intergenic 35.0%
CTCATTGATATCCTTTCTTG+GGG + chr2_3:42885420-42885439 None:intergenic 35.0%
AAAGCATACTAGATGGAAGA+TGG - chr2_3:42885872-42885891 Msa0292960:intron 35.0%
!! TCTGTTTAATTTGGCAGCAA+TGG - chr2_3:42885923-42885942 Msa0292960:CDS 35.0%
!! CTGTTTAATTTGGCAGCAAT+GGG - chr2_3:42885924-42885943 Msa0292960:CDS 35.0%
CATTGCTGAGAGTAAATTGT+TGG - chr2_3:42885974-42885993 Msa0292960:CDS 35.0%
! TGGCGCGTAATCTGAAATTA+GGG + chr2_3:42882051-42882070 None:intergenic 40.0%
! TTGGCGCGTAATCTGAAATT+AGG + chr2_3:42882052-42882071 None:intergenic 40.0%
TTGTTTGGGAATGAGGATTG+AGG + chr2_3:42882077-42882096 None:intergenic 40.0%
!! TGAGAAAGGCTCTTTTAGCT+TGG + chr2_3:42882104-42882123 None:intergenic 40.0%
!!! CTTTTTTACCTCGGAGTGAA+GGG + chr2_3:42882183-42882202 None:intergenic 40.0%
TAAGCACTTGTGTGACTGTT+TGG - chr2_3:42882398-42882417 Msa0292960:CDS 40.0%
AAGCACTTGTGTGACTGTTT+GGG - chr2_3:42882399-42882418 Msa0292960:CDS 40.0%
TTCCGGTTTAAGGATCTGTA+GGG - chr2_3:42882763-42882782 Msa0292960:intron 40.0%
!! TGCTATTTCAAGTGTAGGAC+CGG - chr2_3:42882853-42882872 Msa0292960:intron 40.0%
TTCCCTTAAACTCCAACAGT+TGG - chr2_3:42883351-42883370 Msa0292960:intron 40.0%
TCCCTTAAACTCCAACAGTT+GGG - chr2_3:42883352-42883371 Msa0292960:intron 40.0%
ACCCAACTGTTGGAGTTTAA+GGG + chr2_3:42883356-42883375 None:intergenic 40.0%
AACCCAACTGTTGGAGTTTA+AGG + chr2_3:42883357-42883376 None:intergenic 40.0%
TTAAACTCCAACAGTTGGGT+TGG - chr2_3:42883356-42883375 Msa0292960:intron 40.0%
! TATCTAGGTAGGGAGTTTTG+TGG - chr2_3:42883395-42883414 Msa0292960:intron 40.0%
!!! AGTTTGCTGTCTGTCTTTTG+AGG - chr2_3:42883433-42883452 Msa0292960:intron 40.0%
!! AACCTTTTGAAGGTGATCTG+CGG + chr2_3:42883608-42883627 None:intergenic 40.0%
GAACATCCAATGTTTGTAGG+TGG - chr2_3:42884031-42884050 Msa0292960:intron 40.0%
TAGTGACCACCTACAAACAT+TGG + chr2_3:42884040-42884059 None:intergenic 40.0%
TTGAAACTGCTGGGAAATCT+TGG - chr2_3:42884342-42884361 Msa0292960:intron 40.0%
TTTGTGGCACATGTGTTTGA+AGG - chr2_3:42884627-42884646 Msa0292960:intron 40.0%
TTGTGGCACATGTGTTTGAA+GGG - chr2_3:42884628-42884647 Msa0292960:intron 40.0%
!! CACTCCTAACACAGTTTTGT+AGG + chr2_3:42884692-42884711 None:intergenic 40.0%
! TGGTTGACTCTAGCCAAAAA+AGG + chr2_3:42884729-42884748 None:intergenic 40.0%
ATGCTAGTAAGACATCCCAA+TGG + chr2_3:42884759-42884778 None:intergenic 40.0%
TGTCTTACTAGCATGATGGT+AGG - chr2_3:42884765-42884784 Msa0292960:CDS 40.0%
! GTTTCAACTTTGAGGAGAGT+TGG - chr2_3:42884989-42885008 Msa0292960:intron 40.0%
CAGTAACTTCAATTACGGCA+GGG - chr2_3:42885237-42885256 Msa0292960:intron 40.0%
CTTGGGGGACTAATCATATA+AGG + chr2_3:42885310-42885329 None:intergenic 40.0%
GGTAAAATATCAAGGCTTGG+GGG + chr2_3:42885325-42885344 None:intergenic 40.0%
GTGTCAAGCATAATAGCTAC+TGG + chr2_3:42885394-42885413 None:intergenic 40.0%
TTGATATCCTTTCTTGGGGT+AGG + chr2_3:42885416-42885435 None:intergenic 40.0%
! ATCTTGACTAGCTAGCTACT+TGG + chr2_3:42885726-42885745 None:intergenic 40.0%
! ACTAGGGAAAGCATACTAGA+TGG - chr2_3:42885865-42885884 Msa0292960:intron 40.0%
AAATAATGCCCTGAATGGGT+TGG - chr2_3:42886203-42886222 Msa0292960:five_prime_UTR 40.0%
! AATAATGCCCTGAATGGGTT+GGG - chr2_3:42886204-42886223 Msa0292960:five_prime_UTR 40.0%
CAACAGCACAAAGCAAACCA+AGG - chr2_3:42881914-42881933 Msa0292960:three_prime_UTR 45.0%
! GTGGTGGAAAGGTGAATTGA+CGG + chr2_3:42881996-42882015 None:intergenic 45.0%
GGGAATGAGGATTGAGGATT+TGG + chr2_3:42882071-42882090 None:intergenic 45.0%
!! TGGTGTCTTGTTTGGGAATG+AGG + chr2_3:42882084-42882103 None:intergenic 45.0%
CGAGAGATGGAATCTGAGAA+AGG + chr2_3:42882118-42882137 None:intergenic 45.0%
!!! GCTTTTTTACCTCGGAGTGA+AGG + chr2_3:42882184-42882203 None:intergenic 45.0%
GTTCCGGTTTAAGGATCTGT+AGG - chr2_3:42882762-42882781 Msa0292960:intron 45.0%
TCCGGTTTAAGGATCTGTAG+GGG - chr2_3:42882764-42882783 Msa0292960:intron 45.0%
TCCCCTACAGATCCTTAAAC+CGG + chr2_3:42882768-42882787 None:intergenic 45.0%
! TTTCAAGTGTAGGACCGGTT+TGG - chr2_3:42882858-42882877 Msa0292960:intron 45.0%
TGTGTCTGTCACACCAAACA+GGG - chr2_3:42883155-42883174 Msa0292960:intron 45.0%
GGAGACACTCAAGATAATGC+AGG - chr2_3:42883504-42883523 Msa0292960:intron 45.0%
TTTCTATTCGATTGCGGCCA+TGG - chr2_3:42883573-42883592 Msa0292960:intron 45.0%
AACCGCAGATCACCTTCAAA+AGG - chr2_3:42883603-42883622 Msa0292960:intron 45.0%
AGGTTGCTTGGGTTCAAACA+AGG + chr2_3:42883766-42883785 None:intergenic 45.0%
GTTTGAACCCAAGCAACCTA+TGG - chr2_3:42883767-42883786 Msa0292960:CDS 45.0%
GATGGATATTTGATGCTGGG+TGG - chr2_3:42884223-42884242 Msa0292960:intron 45.0%
TTTGATGCTGGGTGGTATAC+AGG - chr2_3:42884231-42884250 Msa0292960:intron 45.0%
TGGGTGGTATACAGGTGTAT+GGG - chr2_3:42884239-42884258 Msa0292960:intron 45.0%
ACAGGTGTATGGGACATAAC+AGG - chr2_3:42884249-42884268 Msa0292960:intron 45.0%
CAGGTGTATGGGACATAACA+GGG - chr2_3:42884250-42884269 Msa0292960:intron 45.0%
AGGTGTATGGGACATAACAG+GGG - chr2_3:42884251-42884270 Msa0292960:intron 45.0%
AGGCAGCTTCAATGTTCTGT+GGG - chr2_3:42884282-42884301 Msa0292960:intron 45.0%
TGCTGGGAAATCTTGGAATG+AGG - chr2_3:42884349-42884368 Msa0292960:intron 45.0%
!! CCTAACACAGTTTTGTAGGG+AGG + chr2_3:42884688-42884707 None:intergenic 45.0%
CCTCCCTACAAAACTGTGTT+AGG - chr2_3:42884685-42884704 Msa0292960:intron 45.0%
GGGATGTCTTACTAGCATGA+TGG - chr2_3:42884761-42884780 Msa0292960:CDS 45.0%
GAATGTTGTGTGCGACATGT+GGG + chr2_3:42885180-42885199 None:intergenic 45.0%
CCTGCCGTAATTGAAGTTAC+TGG + chr2_3:42885239-42885258 None:intergenic 45.0%
CCAGTAACTTCAATTACGGC+AGG - chr2_3:42885236-42885255 Msa0292960:intron 45.0%
AACATAGTCGCACACCACTA+CGG - chr2_3:42885499-42885518 Msa0292960:intron 45.0%
CAATCAAAAGGTGACCGTAG+TGG + chr2_3:42885516-42885535 None:intergenic 45.0%
TTACAGGCATTTGTAGCAGC+AGG - chr2_3:42885666-42885685 Msa0292960:intron 45.0%
TACAGGCATTTGTAGCAGCA+GGG - chr2_3:42885667-42885686 Msa0292960:intron 45.0%
GAATCCAAACCGCATCAGTT+TGG - chr2_3:42885815-42885834 Msa0292960:intron 45.0%
AAACCGCATCAGTTTGGTCA+GGG - chr2_3:42885821-42885840 Msa0292960:intron 45.0%
ATTGCTCAGAGCTCATGACT+AGG - chr2_3:42885848-42885867 Msa0292960:intron 45.0%
TTGCTCAGAGCTCATGACTA+GGG - chr2_3:42885849-42885868 Msa0292960:intron 45.0%
! TCGACATAATGGGGGCACAA+TGG - chr2_3:42881878-42881897 Msa0292960:three_prime_UTR 50.0%
!! TGAATTGACGGTGCTGCATG+TGG + chr2_3:42881984-42882003 None:intergenic 50.0%
!! TGATTGAGGTGGTGGTGGAA+AGG + chr2_3:42882007-42882026 None:intergenic 50.0%
ATCATCGCCGGAGCAACATT+CGG - chr2_3:42882023-42882042 Msa0292960:three_prime_UTR 50.0%
TAGGGTTCCGAATGTTGCTC+CGG + chr2_3:42882033-42882052 None:intergenic 50.0%
! TGGGACTTTAAGGACCCGTT+TGG + chr2_3:42882615-42882634 None:intergenic 50.0%
GTGTGTCTGTCACACCAAAC+AGG - chr2_3:42883154-42883173 Msa0292960:intron 50.0%
TGCGTTGTGCAGATCATGAC+CGG - chr2_3:42883290-42883309 Msa0292960:intron 50.0%
CAGGAATCCAACCCAACTGT+TGG + chr2_3:42883366-42883385 None:intergenic 50.0%
GATAATGCAGGAGCAAGTGC+AGG - chr2_3:42883516-42883535 Msa0292960:intron 50.0%
TATTCGATTGCGGCCATGGA+TGG - chr2_3:42883577-42883596 Msa0292960:intron 50.0%
ATTCGATTGCGGCCATGGAT+GGG - chr2_3:42883578-42883597 Msa0292960:intron 50.0%
CTGGGTGGTATACAGGTGTA+TGG - chr2_3:42884238-42884257 Msa0292960:intron 50.0%
GGTGTATGGGACATAACAGG+GGG - chr2_3:42884252-42884271 Msa0292960:intron 50.0%
TATGGGACATAACAGGGGGT+GGG - chr2_3:42884256-42884275 Msa0292960:intron 50.0%
GAGGCAGCTTCAATGTTCTG+TGG - chr2_3:42884281-42884300 Msa0292960:intron 50.0%
GGCAGCTTCAATGTTCTGTG+GGG - chr2_3:42884283-42884302 Msa0292960:intron 50.0%
CTGCACTGCTTGAAACTGCT+GGG - chr2_3:42884333-42884352 Msa0292960:intron 50.0%
! TGAGGAGAGTTGGTCCTTCA+CGG - chr2_3:42884999-42885018 Msa0292960:intron 50.0%
CGAATGTTGTGTGCGACATG+TGG + chr2_3:42885181-42885200 None:intergenic 50.0%
! CAGGGAATGTCTTTTGCTCG+TGG - chr2_3:42885255-42885274 Msa0292960:intron 50.0%
CTTGACACCTACCCCAAGAA+AGG - chr2_3:42885406-42885425 Msa0292960:intron 50.0%
GCATTTGTAGCAGCAGGGTT+TGG - chr2_3:42885672-42885691 Msa0292960:intron 50.0%
TTTGTAGCAGCAGGGTTTGG+TGG - chr2_3:42885675-42885694 Msa0292960:intron 50.0%
! TTGTAGCAGCAGGGTTTGGT+GGG - chr2_3:42885676-42885695 Msa0292960:intron 50.0%
! TTTGGTGGGTGGAAGCTTCA+GGG - chr2_3:42885690-42885709 Msa0292960:intron 50.0%
CTGACCAAACTGATGCGGTT+TGG + chr2_3:42885822-42885841 None:intergenic 50.0%
CAAACCGCATCAGTTTGGTC+AGG - chr2_3:42885820-42885839 Msa0292960:intron 50.0%
ACACCCTGACCAAACTGATG+CGG + chr2_3:42885827-42885846 None:intergenic 50.0%
ACCACCACCTCAATCATCGC+CGG - chr2_3:42882011-42882030 Msa0292960:three_prime_UTR 55.0%
TGTTGCTCCGGCGATGATTG+AGG + chr2_3:42882021-42882040 None:intergenic 55.0%
CATGGCGAAGAAGGATGAGG+CGG + chr2_3:42882141-42882160 None:intergenic 55.0%
AGCTTTCGGCATGGCGAAGA+AGG + chr2_3:42882150-42882169 None:intergenic 55.0%
! AGGGTGTTCCCAGGAGCTTT+CGG + chr2_3:42882164-42882183 None:intergenic 55.0%
!! TCCTTCCCTGACTTGCTCAG+AGG + chr2_3:42883316-42883335 None:intergenic 55.0%
! TGTTGCTTGCGACAGCGATG+CGG - chr2_3:42883471-42883490 Msa0292960:intron 55.0%
GGAGCAAGTGCAGGAACTAC+TGG - chr2_3:42883525-42883544 Msa0292960:intron 55.0%
ATCTGCGGTTTGCCCATCCA+TGG + chr2_3:42883593-42883612 None:intergenic 55.0%
GTATGGGACATAACAGGGGG+TGG - chr2_3:42884255-42884274 Msa0292960:intron 55.0%
ACATAACAGGGGGTGGGAAG+AGG - chr2_3:42884262-42884281 Msa0292960:intron 55.0%
GCTGCACTGCTTGAAACTGC+TGG - chr2_3:42884332-42884351 Msa0292960:intron 55.0%
! GTTTGGTGGGTGGAAGCTTC+AGG - chr2_3:42885689-42885708 Msa0292960:intron 55.0%
! GGCGATGATTGAGGTGGTGG+TGG + chr2_3:42882012-42882031 None:intergenic 60.0%
TCCGGCGATGATTGAGGTGG+TGG + chr2_3:42882015-42882034 None:intergenic 60.0%
TGCTCCGGCGATGATTGAGG+TGG + chr2_3:42882018-42882037 None:intergenic 60.0%
AAGGATGAGGCGGCGAGAGA+TGG + chr2_3:42882131-42882150 None:intergenic 60.0%
CGGCATGGCGAAGAAGGATG+AGG + chr2_3:42882144-42882163 None:intergenic 60.0%
TTCGCCATGCCGAAAGCTCC+TGG - chr2_3:42882152-42882171 Msa0292960:three_prime_UTR 60.0%
TCGCCATGCCGAAAGCTCCT+GGG - chr2_3:42882153-42882172 Msa0292960:three_prime_UTR 60.0%
GTTCCCAGGAGCTTTCGGCA+TGG + chr2_3:42882159-42882178 None:intergenic 60.0%
!! TCGGAGTGAAGGGTGTTCCC+AGG + chr2_3:42882173-42882192 None:intergenic 60.0%
TGGGAACACCCTTCACTCCG+AGG - chr2_3:42882172-42882191 Msa0292960:three_prime_UTR 60.0%
ACCGGCCTCTGAGCAAGTCA+GGG - chr2_3:42883308-42883327 Msa0292960:intron 60.0%
!! TCCCTGACTTGCTCAGAGGC+CGG + chr2_3:42883312-42883331 None:intergenic 60.0%
GCCTCTGAGCAAGTCAGGGA+AGG - chr2_3:42883312-42883331 Msa0292960:intron 60.0%
GCAGGAACTACTGGACGCTG+AGG - chr2_3:42883534-42883553 Msa0292960:intron 60.0%
!! TAGCAGCAGGGTTTGGTGGG+TGG - chr2_3:42885679-42885698 Msa0292960:intron 60.0%
GACCGGCCTCTGAGCAAGTC+AGG - chr2_3:42883307-42883326 Msa0292960:intron 65.0%
CTTGCGACAGCGATGCGGCG+CGG - chr2_3:42883476-42883495 Msa0292960:intron 70.0%
! CAGCGATGCGGCGCGGACTA+AGG - chr2_3:42883483-42883502 Msa0292960:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 42881877 42886227 42881877 ID=Msa0292960;Name=Msa0292960
chr2_3 mRNA 42881877 42886227 42881877 ID=Msa0292960-mRNA-1;Parent=Msa0292960;Name=Msa0292960-mRNA-1;_AED=0.13;_eAED=0.13;_QI=94|1|1|1|1|1|5|493|227
chr2_3 exon 42881877 42882432 42881877 ID=Msa0292960-mRNA-1:exon:13679;Parent=Msa0292960-mRNA-1
chr2_3 exon 42883734 42883851 42883734 ID=Msa0292960-mRNA-1:exon:13678;Parent=Msa0292960-mRNA-1
chr2_3 exon 42884439 42884618 42884439 ID=Msa0292960-mRNA-1:exon:13677;Parent=Msa0292960-mRNA-1
chr2_3 exon 42884703 42884802 42884703 ID=Msa0292960-mRNA-1:exon:13676;Parent=Msa0292960-mRNA-1
chr2_3 exon 42885911 42886227 42885911 ID=Msa0292960-mRNA-1:exon:13675;Parent=Msa0292960-mRNA-1
chr2_3 five_prime_UTR 42886134 42886227 42886134 ID=Msa0292960-mRNA-1:five_prime_utr;Parent=Msa0292960-mRNA-1
chr2_3 CDS 42885911 42886133 42885911 ID=Msa0292960-mRNA-1:cds;Parent=Msa0292960-mRNA-1
chr2_3 CDS 42884703 42884802 42884703 ID=Msa0292960-mRNA-1:cds;Parent=Msa0292960-mRNA-1
chr2_3 CDS 42884439 42884618 42884439 ID=Msa0292960-mRNA-1:cds;Parent=Msa0292960-mRNA-1
chr2_3 CDS 42883734 42883851 42883734 ID=Msa0292960-mRNA-1:cds;Parent=Msa0292960-mRNA-1
chr2_3 CDS 42882370 42882432 42882370 ID=Msa0292960-mRNA-1:cds;Parent=Msa0292960-mRNA-1
chr2_3 three_prime_UTR 42881877 42882369 42881877 ID=Msa0292960-mRNA-1:three_prime_utr;Parent=Msa0292960-mRNA-1
Gene Sequence

>Msa0292960

ATGCATTCTACCACATGCAGCACCGTCAATTCACCTTTCCACCACCACCTCAATCATCGCCGGAGCAACATTCGGAACCCTAATTTCAGATTACGCGCCAAATCCTCAATCCTCATTCCCAAACAAGACACCAAGCTAAAAGAGCCTTTCTCAGATTCCATCTCTCGCCGCCTCATCCTTCTTCGCCATGCCGAAAGCTCCTGGGAACACCCTTCACTCCGAGATCATGACCGGCCTCTGAGCAAGTCAGGGAAGGAAGATGCTGTGAAAGTTTCCCTTAAACTCCAACAGTTGGGTTGGATTCCTGAACTTATACTATCTAGCGATGCGGCGCGGACTAAGGAGACACTCAAGATAATGCAGGAGCAAGTGCAGGAACTACTGGACGCTGAGGTTCATTTTGTTTCTAGTTTCTATTCGATTGCGGCCATGGATGGGCAAACCGCAGATCACCTTCAAAAGGTTATTTGTAAATATTCAAGGGATGAGATATTAACTGTCATGTGTATGGGACATAACAGGGGGTGGGAAGAGGCAGCTTCAATGTTCTGTGGGGCATCTGTAGAATTAAAGACATGCAATGCTGCACTGCTTGAAACTGCTGGGAAATCTTGGAATGAGGCATTTGTAGCAGCAGGGTTTGGTGGGTGGAAGCTTCAGGGCATATTAAAACCAAGTAGCTAG
Protein sequence

>Msa0292960

MHSTTCSTVNSPFHHHLNHRRSNIRNPNFRLRAKSSILIPKQDTKLKEPFSDSISRRLILLRHAESSWEHPSLRDHDRPLSKSGKEDAVKVSLKLQQLGWIPELILSSDAARTKETLKIMQEQVQELLDAEVHFVSSFYSIAAMDGQTADHLQKVICKYSRDEILTVMCMGHNRGWEEAASMFCGASVELKTCNAALLETAGKSWNEAFVAAGFGGWKLQGILKPSS*