Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050880 | sp|P25519|HFLX_ECOLI | 43.781 | 402 | 217 | 4 | 154 | 553 | 25 | 419 | 4.93e-99 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050880 | G7I5C6 | 93.333 | 555 | 25 | 3 | 1 | 553 | 1 | 545 | 0.0 | 957 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0050880 | 0.816499 | 5.358704e-52 | -8.615850e-47 |
| Msa0007230 | Msa0050880 | 0.809678 | 1.680049e-50 | -8.615850e-47 |
| Msa0017420 | Msa0050880 | 0.851729 | 7.343035e-61 | -8.615850e-47 |
| Msa0021980 | Msa0050880 | 0.813396 | 2.614890e-51 | -8.615850e-47 |
| Msa0025690 | Msa0050880 | 0.853889 | 1.772602e-61 | -8.615850e-47 |
| Msa0030030 | Msa0050880 | 0.804133 | 2.500365e-49 | -8.615850e-47 |
| Msa0030400 | Msa0050880 | 0.808384 | 3.180787e-50 | -8.615850e-47 |
| Msa0034340 | Msa0050880 | 0.817859 | 2.649405e-52 | -8.615850e-47 |
| Msa0039200 | Msa0050880 | 0.826434 | 2.718187e-54 | -8.615850e-47 |
| Msa0041780 | Msa0050880 | 0.819778 | 9.713456e-53 | -8.615850e-47 |
| Msa0044320 | Msa0050880 | 0.831229 | 1.879031e-55 | -8.615850e-47 |
| Msa0045660 | Msa0050880 | 0.825837 | 3.769536e-54 | -8.615850e-47 |
| Msa0046360 | Msa0050880 | 0.801954 | 7.055459e-49 | -8.615850e-47 |
| Msa0046410 | Msa0050880 | 0.828382 | 9.272145e-55 | -8.615850e-47 |
| Msa0046670 | Msa0050880 | 0.853548 | 2.222211e-61 | -8.615850e-47 |
| Msa0047470 | Msa0050880 | 0.814623 | 1.402008e-51 | -8.615850e-47 |
| Msa0050880 | Msa0053480 | 0.846152 | 2.598382e-59 | -8.615850e-47 |
| Msa0050880 | Msa0055590 | 0.817680 | 2.908767e-52 | -8.615850e-47 |
| Msa0050880 | Msa0055650 | 0.827161 | 1.822825e-54 | -8.615850e-47 |
| Msa0050880 | Msa0056130 | 0.814872 | 1.234529e-51 | -8.615850e-47 |
| Msa0050880 | Msa0056160 | 0.820071 | 8.322646e-53 | -8.615850e-47 |
| Msa0050880 | Msa0059590 | 0.812435 | 4.245116e-51 | -8.615850e-47 |
| Msa0050880 | Msa0060350 | 0.805925 | 1.054743e-49 | -8.615850e-47 |
| Msa0050880 | Msa0060600 | 0.811700 | 6.141789e-51 | -8.615850e-47 |
| Msa0050880 | Msa0062750 | 0.818081 | 2.361237e-52 | -8.615850e-47 |
| Msa0050880 | Msa0070090 | 0.805597 | 1.235981e-49 | -8.615850e-47 |
| Msa0050880 | Msa0077330 | 0.804965 | 1.677085e-49 | -8.615850e-47 |
| Msa0050880 | Msa0083160 | 0.819069 | 1.409403e-52 | -8.615850e-47 |
| Msa0050880 | Msa0085130 | 0.813572 | 2.391796e-51 | -8.615850e-47 |
| Msa0050880 | Msa0086820 | 0.822890 | 1.859513e-53 | -8.615850e-47 |
| Msa0050880 | Msa0089530 | 0.816005 | 6.911821e-52 | -8.615850e-47 |
| Msa0050880 | Msa0090350 | 0.809341 | 1.985161e-50 | -8.615850e-47 |
| Msa0050880 | Msa0093440 | 0.802273 | 6.066019e-49 | -8.615850e-47 |
| Msa0050880 | Msa0105210 | 0.809323 | 2.002524e-50 | -8.615850e-47 |
| Msa0050880 | Msa0105340 | 0.835476 | 1.641227e-56 | -8.615850e-47 |
| Msa0050880 | Msa0116260 | 0.831879 | 1.299637e-55 | -8.615850e-47 |
| Msa0050880 | Msa0130920 | 0.822596 | 2.177248e-53 | -8.615850e-47 |
| Msa0050880 | Msa0131390 | 0.804519 | 2.078095e-49 | -8.615850e-47 |
| Msa0050880 | Msa0133670 | 0.823281 | 1.506933e-53 | -8.615850e-47 |
| Msa0050880 | Msa0133880 | 0.824137 | 9.501674e-54 | -8.615850e-47 |
| Msa0050880 | Msa0137810 | 0.802080 | 6.647164e-49 | -8.615850e-47 |
| Msa0050880 | Msa0146180 | 0.823458 | 1.370160e-53 | -8.615850e-47 |
| Msa0050880 | Msa0146600 | 0.944132 | 3.416347e-103 | -8.615850e-47 |
| Msa0050880 | Msa0153640 | 0.801351 | 9.383044e-49 | -8.615850e-47 |
| Msa0050880 | Msa0155030 | 0.864684 | 1.018580e-64 | -8.615850e-47 |
| Msa0050880 | Msa0162030 | 0.820116 | 8.130382e-53 | -8.615850e-47 |
| Msa0050880 | Msa0162050 | 0.817623 | 2.996027e-52 | -8.615850e-47 |
| Msa0050880 | Msa0162070 | 0.830217 | 3.325172e-55 | -8.615850e-47 |
| Msa0050880 | Msa0164630 | 0.827463 | 1.543126e-54 | -8.615850e-47 |
| Msa0050880 | Msa0169960 | 0.823001 | 1.752029e-53 | -8.615850e-47 |
| Msa0050880 | Msa0173760 | 0.809866 | 1.530967e-50 | -8.615850e-47 |
| Msa0050880 | Msa0173850 | 0.812139 | 4.926049e-51 | -8.615850e-47 |
| Msa0050880 | Msa0175530 | 0.804847 | 1.774611e-49 | -8.615850e-47 |
| Msa0050880 | Msa0177490 | 0.804224 | 2.393710e-49 | -8.615850e-47 |
| Msa0050880 | Msa0180980 | 0.803722 | 3.044315e-49 | -8.615850e-47 |
| Msa0050880 | Msa0181290 | 0.815582 | 8.587950e-52 | -8.615850e-47 |
| Msa0050880 | Msa0184030 | 0.829029 | 6.469996e-55 | -8.615850e-47 |
| Msa0050880 | Msa0184120 | 0.821523 | 3.858712e-53 | -8.615850e-47 |
| Msa0050880 | Msa0206940 | 0.817292 | 3.557123e-52 | -8.615850e-47 |
| Msa0050880 | Msa0207900 | 0.805000 | 1.649107e-49 | -8.615850e-47 |
| Msa0050880 | Msa0208630 | 0.800914 | 1.152505e-48 | -8.615850e-47 |
| Msa0050880 | Msa0222720 | 0.802468 | 5.530122e-49 | -8.615850e-47 |
| Msa0050880 | Msa0226800 | 0.842457 | 2.555926e-58 | -8.615850e-47 |
| Msa0050880 | Msa0243820 | 0.800130 | 1.664628e-48 | -8.615850e-47 |
| Msa0050880 | Msa0250520 | 0.815925 | 7.199499e-52 | -8.615850e-47 |
| Msa0050880 | Msa0263520 | 0.806105 | 9.666313e-50 | -8.615850e-47 |
| Msa0050880 | Msa0267120 | 0.806678 | 7.321031e-50 | -8.615850e-47 |
| Msa0050880 | Msa0270610 | 0.813093 | 3.047642e-51 | -8.615850e-47 |
| Msa0050880 | Msa0284870 | 0.810321 | 1.221366e-50 | -8.615850e-47 |
| Msa0050880 | Msa0288220 | 0.853531 | 2.246407e-61 | -8.615850e-47 |
| Msa0050880 | Msa0292150 | 0.809609 | 1.738630e-50 | -8.615850e-47 |
| Msa0050880 | Msa0292960 | 0.811469 | 6.894708e-51 | -8.615850e-47 |
| Msa0050880 | Msa0301300 | 0.822041 | 2.928092e-53 | -8.615850e-47 |
| Msa0050880 | Msa0311330 | 0.846627 | 1.928843e-59 | -8.615850e-47 |
| Msa0050880 | Msa0338670 | 0.802049 | 6.746995e-49 | -8.615850e-47 |
| Msa0050880 | Msa0339340 | 0.805455 | 1.323794e-49 | -8.615850e-47 |
| Msa0050880 | Msa0339560 | 0.800246 | 1.577271e-48 | -8.615850e-47 |
| Msa0050880 | Msa0350020 | 0.837956 | 3.827954e-57 | -8.615850e-47 |
| Msa0050880 | Msa0351220 | 0.839903 | 1.199300e-57 | -8.615850e-47 |
| Msa0050880 | Msa0353900 | 0.806998 | 6.264472e-50 | -8.615850e-47 |
| Msa0050880 | Msa0360980 | 0.804901 | 1.729433e-49 | -8.615850e-47 |
| Msa0050880 | Msa0363460 | 0.830830 | 2.354833e-55 | -8.615850e-47 |
| Msa0050880 | Msa0365870 | 0.802600 | 5.193683e-49 | -8.615850e-47 |
| Msa0050880 | Msa0371610 | 0.815391 | 9.467423e-52 | -8.615850e-47 |
| Msa0050880 | Msa0387790 | 0.814825 | 1.264999e-51 | -8.615850e-47 |
| Msa0050880 | Msa0408160 | 0.823073 | 1.685612e-53 | -8.615850e-47 |
| Msa0050880 | Msa0409820 | 0.808030 | 3.782942e-50 | -8.615850e-47 |
| Msa0050880 | Msa0411000 | 0.856427 | 3.241816e-62 | -8.615850e-47 |
| Msa0050880 | Msa0414070 | 0.802154 | 6.418940e-49 | -8.615850e-47 |
| Msa0050880 | Msa0423590 | 0.800489 | 1.407014e-48 | -8.615850e-47 |
| Msa0050880 | Msa0423600 | 0.817601 | 3.029801e-52 | -8.615850e-47 |
| Msa0050880 | Msa0425080 | 0.819705 | 1.009394e-52 | -8.615850e-47 |
| Msa0050880 | Msa0427050 | 0.840748 | 7.213239e-58 | -8.615850e-47 |
| Msa0050880 | Msa0439700 | 0.803700 | 3.075890e-49 | -8.615850e-47 |
| Msa0050880 | Msa0453220 | 0.804353 | 2.249554e-49 | -8.615850e-47 |
| Msa0050880 | Msa0455230 | 0.834310 | 3.228121e-56 | -8.615850e-47 |
| Msa0050880 | Msa0457370 | 0.804915 | 1.717928e-49 | -8.615850e-47 |
| Msa0050880 | Msa0459120 | 0.805882 | 1.076919e-49 | -8.615850e-47 |
| Msa0050880 | Msa0463580 | 0.848036 | 7.913169e-60 | -8.615850e-47 |
| Msa0050880 | Msa0469270 | 0.827098 | 1.887198e-54 | -8.615850e-47 |
| Msa0050880 | Msa0470650 | 0.805010 | 1.641108e-49 | -8.615850e-47 |
| Msa0050880 | Msa0471890 | 0.803994 | 2.671851e-49 | -8.615850e-47 |
| Msa0050880 | Msa0473450 | 0.853889 | 1.772602e-61 | -8.615850e-47 |
| Msa0050880 | Msa0476180 | 0.809558 | 1.783608e-50 | -8.615850e-47 |
| Msa0050880 | Msa0505660 | 0.812328 | 4.481009e-51 | -8.615850e-47 |
| Msa0050880 | Msa0507190 | 0.826597 | 2.485756e-54 | -8.615850e-47 |
| Msa0050880 | Msa0509970 | 0.801028 | 1.092334e-48 | -8.615850e-47 |
| Msa0050880 | Msa0511890 | 0.820472 | 6.738521e-53 | -8.615850e-47 |
| Msa0050880 | Msa0512310 | 0.823424 | 1.395891e-53 | -8.615850e-47 |
| Msa0050880 | Msa0514990 | 0.833311 | 5.736737e-56 | -8.615850e-47 |
| Msa0050880 | Msa0515680 | 0.801432 | 9.030279e-49 | -8.615850e-47 |
| Msa0050880 | Msa0516480 | 0.838405 | 2.931957e-57 | -8.615850e-47 |
| Msa0050880 | Msa0520810 | 0.803129 | 4.038816e-49 | -8.615850e-47 |
| Msa0050880 | Msa0528740 | 0.817264 | 3.608553e-52 | -8.615850e-47 |
| Msa0050880 | Msa0530930 | 0.807113 | 5.924533e-50 | -8.615850e-47 |
| Msa0050880 | Msa0548720 | 0.802975 | 4.346841e-49 | -8.615850e-47 |
| Msa0050880 | Msa0549740 | 0.869443 | 3.083708e-66 | -8.615850e-47 |
| Msa0050880 | Msa0553520 | 0.804356 | 2.247342e-49 | -8.615850e-47 |
| Msa0050880 | Msa0555980 | 0.833779 | 4.383492e-56 | -8.615850e-47 |
| Msa0050880 | Msa0563140 | 0.858625 | 7.247298e-63 | -8.615850e-47 |
| Msa0050880 | Msa0564490 | 0.843286 | 1.538854e-58 | -8.615850e-47 |
| Msa0050880 | Msa0565530 | 0.817571 | 3.077942e-52 | -8.615850e-47 |
| Msa0050880 | Msa0568120 | 0.818102 | 2.335492e-52 | -8.615850e-47 |
| Msa0050880 | Msa0568490 | 0.821883 | 3.186700e-53 | -8.615850e-47 |
| Msa0050880 | Msa0570490 | 0.807670 | 4.513522e-50 | -8.615850e-47 |
| Msa0050880 | Msa0573970 | 0.810660 | 1.032372e-50 | -8.615850e-47 |
| Msa0050880 | Msa0577230 | 0.802240 | 6.162126e-49 | -8.615850e-47 |
| Msa0050880 | Msa0580430 | 0.821381 | 4.161077e-53 | -8.615850e-47 |
| Msa0050880 | Msa0595240 | 0.816051 | 6.750080e-52 | -8.615850e-47 |
| Msa0050880 | Msa0598250 | 0.820202 | 7.768159e-53 | -8.615850e-47 |
| Msa0050880 | Msa0600820 | 0.811462 | 6.917593e-51 | -8.615850e-47 |
| Msa0050880 | Msa0606060 | 0.803855 | 2.856911e-49 | -8.615850e-47 |
| Msa0050880 | Msa0607280 | 0.803329 | 3.671904e-49 | -8.615850e-47 |
| Msa0050880 | Msa0607440 | 0.811871 | 5.636226e-51 | -8.615850e-47 |
| Msa0050880 | Msa0617560 | -0.855724 | 5.205587e-62 | -8.615850e-47 |
| Msa0050880 | Msa0618260 | 0.829023 | 6.489542e-55 | -8.615850e-47 |
| Msa0050880 | Msa0622390 | 0.809968 | 1.455751e-50 | -8.615850e-47 |
| Msa0050880 | Msa0622690 | 0.814885 | 1.226616e-51 | -8.615850e-47 |
| Msa0050880 | Msa0623270 | 0.813865 | 2.061673e-51 | -8.615850e-47 |
| Msa0050880 | Msa0626890 | 0.805716 | 1.167014e-49 | -8.615850e-47 |
| Msa0050880 | Msa0635350 | 0.804902 | 1.728257e-49 | -8.615850e-47 |
| Msa0050880 | Msa0635470 | 0.848766 | 4.973030e-60 | -8.615850e-47 |
| Msa0050880 | Msa0637910 | 0.806694 | 7.265388e-50 | -8.615850e-47 |
| Msa0050880 | Msa0639030 | 0.801823 | 7.506328e-49 | -8.615850e-47 |
| Msa0050880 | Msa0641020 | 0.806757 | 7.045541e-50 | -8.615850e-47 |
| Msa0050880 | Msa0645780 | 0.816992 | 4.154180e-52 | -8.615850e-47 |
| Msa0050880 | Msa0646390 | 0.856005 | 4.308967e-62 | -8.615850e-47 |
| Msa0050880 | Msa0647000 | 0.823849 | 1.109956e-53 | -8.615850e-47 |
| Msa0050880 | Msa0650360 | 0.825608 | 4.272273e-54 | -8.615850e-47 |
| Msa0050880 | Msa0654060 | 0.803062 | 4.170128e-49 | -8.615850e-47 |
| Msa0050880 | Msa0668000 | 0.807905 | 4.021532e-50 | -8.615850e-47 |
| Msa0050880 | Msa0668160 | 0.828752 | 7.550589e-55 | -8.615850e-47 |
| Msa0050880 | Msa0672350 | 0.806449 | 8.182853e-50 | -8.615850e-47 |
| Msa0050880 | Msa0675790 | 0.807732 | 4.378832e-50 | -8.615850e-47 |
| Msa0050880 | Msa0684530 | 0.806454 | 8.161928e-50 | -8.615850e-47 |
| Msa0050880 | Msa0685880 | 0.823044 | 1.712096e-53 | -8.615850e-47 |
| Msa0050880 | Msa0688550 | 0.802000 | 6.905695e-49 | -8.615850e-47 |
| Msa0050880 | Msa0692000 | 0.805135 | 1.544583e-49 | -8.615850e-47 |
| Msa0050880 | Msa0692910 | 0.807047 | 6.117765e-50 | -8.615850e-47 |
| Msa0050880 | Msa0716780 | 0.826330 | 2.878791e-54 | -8.615850e-47 |
| Msa0050880 | Msa0718920 | 0.826655 | 2.407868e-54 | -8.615850e-47 |
| Msa0050880 | Msa0722930 | 0.819929 | 8.970667e-53 | -8.615850e-47 |
| Msa0050880 | Msa0723140 | 0.810010 | 1.425802e-50 | -8.615850e-47 |
| Msa0050880 | Msa0726610 | 0.857622 | 1.439830e-62 | -8.615850e-47 |
| Msa0050880 | Msa0734760 | 0.807621 | 4.622534e-50 | -8.615850e-47 |
| Msa0050880 | Msa0736930 | 0.812425 | 4.267366e-51 | -8.615850e-47 |
| Msa0050880 | Msa0750380 | 0.800167 | 1.636398e-48 | -8.615850e-47 |
| Msa0050880 | Msa0752580 | 0.818250 | 2.161803e-52 | -8.615850e-47 |
| Msa0050880 | Msa0754500 | 0.810569 | 1.080061e-50 | -8.615850e-47 |
| Msa0050880 | Msa0756410 | 0.817690 | 2.892581e-52 | -8.615850e-47 |
| Msa0050880 | Msa0756480 | 0.848243 | 6.938998e-60 | -8.615850e-47 |
| Msa0050880 | Msa0763910 | 0.805853 | 1.092035e-49 | -8.615850e-47 |
| Msa0050880 | Msa0769800 | 0.834651 | 2.650232e-56 | -8.615850e-47 |
| Msa0050880 | Msa0770430 | 0.801989 | 6.938682e-49 | -8.615850e-47 |
| Msa0050880 | Msa0778580 | 0.807538 | 4.813456e-50 | -8.615850e-47 |
| Msa0050880 | Msa0789800 | 0.814070 | 1.857594e-51 | -8.615850e-47 |
| Msa0050880 | Msa0794460 | 0.811982 | 5.331123e-51 | -8.615850e-47 |
| Msa0050880 | Msa0795930 | 0.827213 | 1.771663e-54 | -8.615850e-47 |
| Msa0050880 | Msa0800130 | 0.822437 | 2.369607e-53 | -8.615850e-47 |
| Msa0050880 | Msa0807950 | 0.806211 | 9.182980e-50 | -8.615850e-47 |
| Msa0050880 | Msa0814780 | 0.843148 | 1.673894e-58 | -8.615850e-47 |
| Msa0050880 | Msa0815950 | 0.829456 | 5.096660e-55 | -8.615850e-47 |
| Msa0050880 | Msa0830720 | 0.804934 | 1.702238e-49 | -8.615850e-47 |
| Msa0050880 | Msa0830900 | 0.805922 | 1.056404e-49 | -8.615850e-47 |
| Msa0050880 | Msa0835510 | 0.844928 | 5.576942e-59 | -8.615850e-47 |
| Msa0050880 | Msa0835550 | 0.802392 | 5.732596e-49 | -8.615850e-47 |
| Msa0050880 | Msa0836200 | 0.830915 | 2.243578e-55 | -8.615850e-47 |
| Msa0050880 | Msa0837590 | 0.834996 | 2.169887e-56 | -8.615850e-47 |
| Msa0050880 | Msa0840630 | 0.849947 | 2.331148e-60 | -8.615850e-47 |
| Msa0050880 | Msa0841980 | 0.815576 | 8.611281e-52 | -8.615850e-47 |
| Msa0050880 | Msa0853920 | 0.800760 | 1.238877e-48 | -8.615850e-47 |
| Msa0050880 | Msa0861480 | 0.822920 | 1.829365e-53 | -8.615850e-47 |
| Msa0050880 | Msa0861560 | 0.834589 | 2.746187e-56 | -8.615850e-47 |
| Msa0050880 | Msa0868040 | 0.840769 | 7.120632e-58 | -8.615850e-47 |
| Msa0050880 | Msa0883390 | 0.823787 | 1.147716e-53 | -8.615850e-47 |
| Msa0050880 | Msa0883410 | 0.850270 | 1.892989e-60 | -8.615850e-47 |
| Msa0050880 | Msa0883430 | 0.817344 | 3.461735e-52 | -8.615850e-47 |
| Msa0050880 | Msa0883450 | 0.815868 | 7.416483e-52 | -8.615850e-47 |
| Msa0050880 | Msa0883660 | 0.803480 | 3.416010e-49 | -8.615850e-47 |
| Msa0050880 | Msa0883670 | 0.812415 | 4.289732e-51 | -8.615850e-47 |
| Msa0050880 | Msa0883700 | 0.817451 | 3.275711e-52 | -8.615850e-47 |
| Msa0050880 | Msa0887000 | 0.853103 | 2.980185e-61 | -8.615850e-47 |
| Msa0050880 | Msa0887070 | 0.815536 | 8.791996e-52 | -8.615850e-47 |
| Msa0050880 | Msa0899700 | 0.812884 | 3.386024e-51 | -8.615850e-47 |
| Msa0050880 | Msa0912160 | 0.802312 | 5.955253e-49 | -8.615850e-47 |
| Msa0050880 | Msa0934830 | 0.824128 | 9.545027e-54 | -8.615850e-47 |
| Msa0050880 | Msa0950410 | 0.826477 | 2.656025e-54 | -8.615850e-47 |
| Msa0050880 | Msa0951720 | 0.832015 | 1.203163e-55 | -8.615850e-47 |
| Msa0050880 | Msa0964680 | 0.845199 | 4.712272e-59 | -8.615850e-47 |
| Msa0050880 | Msa0967670 | 0.812367 | 4.392847e-51 | -8.615850e-47 |
| Msa0050880 | Msa0970050 | 0.821894 | 3.167503e-53 | -8.615850e-47 |
| Msa0050880 | Msa0975280 | 0.818035 | 2.417673e-52 | -8.615850e-47 |
| Msa0050880 | Msa0978000 | 0.812505 | 4.099651e-51 | -8.615850e-47 |
| Msa0050880 | Msa0984840 | 0.821917 | 3.127975e-53 | -8.615850e-47 |
| Msa0050880 | Msa0984850 | 0.823292 | 1.498120e-53 | -8.615850e-47 |
| Msa0050880 | Msa0988500 | 0.863134 | 3.090787e-64 | -8.615850e-47 |
| Msa0050880 | Msa0988510 | 0.803619 | 3.198026e-49 | -8.615850e-47 |
| Msa0050880 | Msa1008960 | 0.826472 | 2.662067e-54 | -8.615850e-47 |
| Msa0050880 | Msa1016110 | 0.824986 | 5.995668e-54 | -8.615850e-47 |
| Msa0050880 | Msa1016130 | 0.813555 | 2.412314e-51 | -8.615850e-47 |
| Msa0050880 | Msa1026720 | 0.833772 | 4.401625e-56 | -8.615850e-47 |
| Msa0050880 | Msa1031220 | 0.819936 | 8.939921e-53 | -8.615850e-47 |
| Msa0050880 | Msa1033670 | 0.815526 | 8.835807e-52 | -8.615850e-47 |
| Msa0050880 | Msa1038820 | 0.863657 | 2.128588e-64 | -8.615850e-47 |
| Msa0050880 | Msa1050320 | 0.826943 | 2.055297e-54 | -8.615850e-47 |
| Msa0050880 | Msa1064920 | 0.806377 | 8.471500e-50 | -8.615850e-47 |
| Msa0050880 | Msa1067710 | 0.815832 | 7.552546e-52 | -8.615850e-47 |
| Msa0050880 | Msa1071310 | 0.838643 | 2.545177e-57 | -8.615850e-47 |
| Msa0050880 | Msa1071460 | 0.814614 | 1.408323e-51 | -8.615850e-47 |
| Msa0050880 | Msa1072640 | 0.810714 | 1.004834e-50 | -8.615850e-47 |
| Msa0050880 | Msa1081700 | 0.846534 | 2.045197e-59 | -8.615850e-47 |
| Msa0050880 | Msa1082390 | 0.830190 | 3.376550e-55 | -8.615850e-47 |
| Msa0050880 | Msa1087530 | 0.824307 | 8.665866e-54 | -8.615850e-47 |
| Msa0050880 | Msa1093390 | 0.819116 | 1.375435e-52 | -8.615850e-47 |
| Msa0050880 | Msa1097380 | 0.813919 | 2.005330e-51 | -8.615850e-47 |
| Msa0050880 | Msa1113210 | 0.848660 | 5.320512e-60 | -8.615850e-47 |
| Msa0050880 | Msa1113280 | 0.877069 | 8.440850e-69 | -8.615850e-47 |
| Msa0050880 | Msa1117830 | 0.801085 | 1.063529e-48 | -8.615850e-47 |
| Msa0050880 | Msa1130650 | 0.826666 | 2.393588e-54 | -8.615850e-47 |
| Msa0050880 | Msa1131900 | 0.821709 | 3.495626e-53 | -8.615850e-47 |
| Msa0050880 | Msa1135660 | 0.810258 | 1.260752e-50 | -8.615850e-47 |
| Msa0050880 | Msa1145370 | 0.804904 | 1.726871e-49 | -8.615850e-47 |
| Msa0050880 | Msa1161520 | 0.838529 | 2.724116e-57 | -8.615850e-47 |
| Msa0050880 | Msa1161760 | 0.803028 | 4.237324e-49 | -8.615850e-47 |
| Msa0050880 | Msa1165290 | 0.810896 | 9.175138e-51 | -8.615850e-47 |
| Msa0050880 | Msa1166280 | 0.800115 | 1.676449e-48 | -8.615850e-47 |
| Msa0050880 | Msa1182400 | 0.845991 | 2.874490e-59 | -8.615850e-47 |
| Msa0050880 | Msa1182990 | 0.802226 | 6.202716e-49 | -8.615850e-47 |
| Msa0050880 | Msa1184580 | 0.830443 | 2.928819e-55 | -8.615850e-47 |
| Msa0050880 | Msa1184740 | 0.846841 | 1.685718e-59 | -8.615850e-47 |
| Msa0050880 | Msa1186010 | 0.826361 | 2.829513e-54 | -8.615850e-47 |
| Msa0050880 | Msa1188820 | 0.811862 | 5.660620e-51 | -8.615850e-47 |
| Msa0050880 | Msa1191390 | 0.852719 | 3.837469e-61 | -8.615850e-47 |
| Msa0050880 | Msa1206560 | 0.806326 | 8.686466e-50 | -8.615850e-47 |
| Msa0050880 | Msa1208250 | 0.875492 | 2.953400e-68 | -8.615850e-47 |
| Msa0050880 | Msa1209790 | 0.863424 | 2.515260e-64 | -8.615850e-47 |
| Msa0050880 | Msa1209800 | 0.848690 | 5.219163e-60 | -8.615850e-47 |
| Msa0050880 | Msa1212740 | 0.842771 | 2.109676e-58 | -8.615850e-47 |
| Msa0050880 | Msa1212960 | 0.820069 | 8.333426e-53 | -8.615850e-47 |
| Msa0050880 | Msa1222580 | 0.808166 | 3.539798e-50 | -8.615850e-47 |
| Msa0050880 | Msa1223510 | 0.808610 | 2.845580e-50 | -8.615850e-47 |
| Msa0050880 | Msa1227060 | 0.986902 | 2.302786e-168 | -8.615850e-47 |
| Msa0050880 | Msa1227180 | 0.836918 | 7.060384e-57 | -8.615850e-47 |
| Msa0050880 | Msa1230190 | 0.828734 | 7.625095e-55 | -8.615850e-47 |
| Msa0050880 | Msa1233770 | 0.816236 | 6.135851e-52 | -8.615850e-47 |
| Msa0050880 | Msa1237260 | 0.816558 | 5.198200e-52 | -8.615850e-47 |
| Msa0050880 | Msa1244710 | 0.822774 | 1.978465e-53 | -8.615850e-47 |
| Msa0050880 | Msa1258200 | 0.819483 | 1.134321e-52 | -8.615850e-47 |
| Msa0050880 | Msa1268370 | 0.821854 | 3.235358e-53 | -8.615850e-47 |
| Msa0050880 | Msa1272130 | 0.825626 | 4.231355e-54 | -8.615850e-47 |
| Msa0050880 | Msa1276070 | 0.845674 | 3.505572e-59 | -8.615850e-47 |
| Msa0050880 | Msa1276080 | 0.816076 | 6.662004e-52 | -8.615850e-47 |
| Msa0050880 | Msa1279310 | 0.811451 | 6.955077e-51 | -8.615850e-47 |
| Msa0050880 | Msa1283770 | 0.821566 | 3.771721e-53 | -8.615850e-47 |
| Msa0050880 | Msa1287160 | 0.819868 | 9.265303e-53 | -8.615850e-47 |
| Msa0050880 | Msa1287340 | 0.814705 | 1.344716e-51 | -8.615850e-47 |
| Msa0050880 | Msa1292620 | 0.805869 | 1.084078e-49 | -8.615850e-47 |
| Msa0050880 | Msa1295010 | 0.817024 | 4.087037e-52 | -8.615850e-47 |
| Msa0050880 | Msa1299940 | 0.816190 | 6.283838e-52 | -8.615850e-47 |
| Msa0050880 | Msa1308460 | 0.804564 | 2.033492e-49 | -8.615850e-47 |
| Msa0050880 | Msa1310340 | 0.813860 | 2.067196e-51 | -8.615850e-47 |
| Msa0050880 | Msa1319720 | 0.850411 | 1.727655e-60 | -8.615850e-47 |
| Msa0050880 | Msa1323270 | 0.807050 | 6.106986e-50 | -8.615850e-47 |
| Msa0050880 | Msa1326000 | 0.807117 | 5.911156e-50 | -8.615850e-47 |
| Msa0050880 | Msa1328600 | 0.826095 | 3.273143e-54 | -8.615850e-47 |
| Msa0050880 | Msa1336350 | 0.807802 | 4.230887e-50 | -8.615850e-47 |
| Msa0050880 | Msa1343770 | 0.814145 | 1.788338e-51 | -8.615850e-47 |
| Msa0050880 | Msa1348240 | 0.802932 | 4.437481e-49 | -8.615850e-47 |
| Msa0050880 | Msa1357380 | 0.879300 | 1.394448e-69 | -8.615850e-47 |
| Msa0050880 | Msa1366700 | 0.873669 | 1.228910e-67 | -8.615850e-47 |
| Msa0050880 | Msa1371840 | 0.830410 | 2.982803e-55 | -8.615850e-47 |
| Msa0050880 | Msa1373950 | 0.806631 | 7.490720e-50 | -8.615850e-47 |
| Msa0050880 | Msa1381720 | 0.817797 | 2.737038e-52 | -8.615850e-47 |
| Msa0050880 | Msa1384980 | 0.834656 | 2.642099e-56 | -8.615850e-47 |
| Msa0050880 | Msa1385940 | 0.809469 | 1.863071e-50 | -8.615850e-47 |
| Msa0050880 | Msa1386520 | 0.842832 | 2.031760e-58 | -8.615850e-47 |
| Msa0050880 | Msa1387090 | 0.805285 | 1.437039e-49 | -8.615850e-47 |
| Msa0050880 | Msa1392680 | 0.817823 | 2.699669e-52 | -8.615850e-47 |
| Msa0050880 | Msa1395640 | 0.815956 | 7.088539e-52 | -8.615850e-47 |
| Msa0050880 | Msa1397110 | 0.808366 | 3.208450e-50 | -8.615850e-47 |
| Msa0050880 | Msa1397540 | 0.820217 | 7.708831e-53 | -8.615850e-47 |
| Msa0050880 | Msa1408190 | 0.836612 | 8.449953e-57 | -8.615850e-47 |
| Msa0050880 | Msa1428440 | 0.826170 | 3.141944e-54 | -8.615850e-47 |
| Msa0050880 | Msa1432250 | 0.829476 | 5.039781e-55 | -8.615850e-47 |
| Msa0050880 | Msa1433380 | 0.816468 | 5.444694e-52 | -8.615850e-47 |
| Msa0050880 | Msa1439160 | 0.807166 | 5.771953e-50 | -8.615850e-47 |
| Msa0050880 | Msa1440180 | 0.829866 | 4.049611e-55 | -8.615850e-47 |
| Msa0050880 | Msa1448990 | 0.837180 | 6.051417e-57 | -8.615850e-47 |
| Msa0050880 | Msa1449740 | 0.831379 | 1.726137e-55 | -8.615850e-47 |
| Msa0050880 | Msa1450420 | 0.818706 | 1.704323e-52 | -8.615850e-47 |
| Msa0050880 | Msa1450850 | 0.821583 | 3.738270e-53 | -8.615850e-47 |
| Msa0050880 | Msa1459630 | 0.807598 | 4.673488e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050880 | MtrunA17_Chr1g0155621 | 93.333 | 555 | 25 | 3 | 1 | 553 | 1 | 545 | 0.0 | 957 |
| Msa0050880 | MtrunA17_Chr5g0442071 | 38.462 | 299 | 148 | 7 | 185 | 450 | 107 | 402 | 2.41e-45 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050880 | AT5G57960.1 | 83.221 | 447 | 69 | 1 | 102 | 548 | 90 | 530 | 0.0 | 756 |
| Msa0050880 | AT5G57960.2 | 85.867 | 375 | 53 | 0 | 175 | 549 | 3 | 377 | 0.0 | 684 |
| Msa0050880 | AT3G49725.1 | 35.535 | 318 | 166 | 8 | 169 | 450 | 157 | 471 | 1.11e-41 | 159 |
Find 115 sgRNAs with CRISPR-Local
Find 432 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTGTTACCATTTGAAAA+TGG | 0.177139 | 1_2:-4902746 | Msa0050880:CDS |
| AGCTGATACTGCTGGATTAT+TGG | 0.256175 | 1_2:-4908359 | Msa0050880:CDS |
| AGAAGATTCTTTGAGTGAAT+TGG | 0.301356 | 1_2:-4908389 | Msa0050880:CDS |
| GATATCAGAGTCATCACTTT+TGG | 0.326042 | 1_2:-4904588 | Msa0050880:CDS |
| ACCGAAAGCAGTACCGTAAC+AGG | 0.336454 | 1_2:-4905431 | Msa0050880:CDS |
| CTTTGTTACCATTTGAAAAT+GGG | 0.348300 | 1_2:-4902745 | Msa0050880:CDS |
| CCGATATACGTCCTAGGGTT+TGG | 0.363874 | 1_2:+4907056 | None:intergenic |
| GCCTGTTACGGTACTGCTTT+CGG | 0.368909 | 1_2:+4905430 | None:intergenic |
| AACCATTCCAACTTGGTGTA+TGG | 0.370214 | 1_2:+4902709 | None:intergenic |
| ATAATGACTTGCAGCATAAC+AGG | 0.371911 | 1_2:-4902324 | Msa0050880:three_prime_UTR |
| TAAAACCAACAGTGTCTGTT+AGG | 0.378664 | 1_2:+4904789 | None:intergenic |
| CATTTATCTGTTGCTCAGCC+AGG | 0.379878 | 1_2:+4904419 | None:intergenic |
| AACACATGAAGCATCTTTAC+AGG | 0.379979 | 1_2:-4906274 | Msa0050880:intron |
| TGGTGCATGTGATTGATATC+AGG | 0.385889 | 1_2:-4904568 | Msa0050880:intron |
| CTAGGTTGCATTAGCACAAA+TGG | 0.387279 | 1_2:-4905827 | Msa0050880:intron |
| TTGTATGCCATTGCCACTTA+AGG | 0.397151 | 1_2:+4902924 | None:intergenic |
| CCAAACCCTAGGACGTATAT+CGG | 0.399038 | 1_2:-4907056 | Msa0050880:CDS |
| TTACATGTTTAAGAAAGTTA+AGG | 0.413739 | 1_2:+4902464 | None:intergenic |
| GATTGTTCTTGTTCTTGAAT+TGG | 0.418768 | 1_2:+4909245 | None:intergenic |
| GGTGAAGTTAGTGATTCATT+TGG | 0.426485 | 1_2:-4908415 | Msa0050880:CDS |
| CAATTCCAAAGTTGATGGTC+TGG | 0.428100 | 1_2:-4904360 | Msa0050880:CDS |
| GGTAGTGGCTTTATCTTCAT+CGG | 0.428638 | 1_2:+4909208 | None:intergenic |
| ATGAAATGCGCATGCGTTAA+CGG | 0.432671 | 1_2:-4909482 | Msa0050880:CDS |
| GTTAAGAGAGAAAGAGGATA+AGG | 0.435361 | 1_2:+4909334 | None:intergenic |
| ATCTTTCTTACTAGTGTAGT+AGG | 0.443695 | 1_2:+4904755 | None:intergenic |
| GGAGGACAGGTGAAGGGAAT+GGG | 0.443918 | 1_2:-4905751 | Msa0050880:CDS |
| TAAGAGTGCAATTAATGCAT+TGG | 0.446596 | 1_2:-4907012 | Msa0050880:CDS |
| ATTTATCTGTTGCTCAGCCA+GGG | 0.448336 | 1_2:+4904420 | None:intergenic |
| TTCTTGAATTGGAAGTAAAA+CGG | 0.448597 | 1_2:+4909256 | None:intergenic |
| GGTACACACAGTTGTCTCAT+AGG | 0.449520 | 1_2:+4902491 | None:intergenic |
| GCTTTATCTTCATCGGGAGT+TGG | 0.450309 | 1_2:+4909215 | None:intergenic |
| GTAGTGGCTTTATCTTCATC+GGG | 0.451549 | 1_2:+4909209 | None:intergenic |
| ACCTGTGCCAGTGGTATCCT+TGG | 0.453180 | 1_2:-4905397 | Msa0050880:intron |
| TGGAAGTAAAACGGCGTCGT+TGG | 0.454503 | 1_2:+4909265 | None:intergenic |
| TAGGTTGGTTATACGAATGC+TGG | 0.454748 | 1_2:-4905275 | Msa0050880:CDS |
| ATCATCAATTCCAAAGTTGA+TGG | 0.461956 | 1_2:-4904365 | Msa0050880:CDS |
| ACTCATCTTGAGCGTCAATC+AGG | 0.469943 | 1_2:-4905772 | Msa0050880:CDS |
| TTTGATGATGAGCTATCAGC+TGG | 0.475329 | 1_2:-4906972 | Msa0050880:CDS |
| TTTAACAGGACTCCATGGTA+TGG | 0.475571 | 1_2:-4902775 | Msa0050880:intron |
| CCAGAGCCGATATACGTCCT+AGG | 0.479202 | 1_2:+4907050 | None:intergenic |
| CTCCTCCAGTGTGGCTCTGA+AGG | 0.482448 | 1_2:+4904610 | None:intergenic |
| AGGAGGACAGGTGAAGGGAA+TGG | 0.488898 | 1_2:-4905752 | Msa0050880:CDS |
| TTATCTTCATCGGGAGTTGG+AGG | 0.492319 | 1_2:+4909218 | None:intergenic |
| TTCTAGGCAACTGCGCAACC+TGG | 0.497117 | 1_2:-4906373 | Msa0050880:intron |
| TTGTTCCAGACCATCAACTT+TGG | 0.497637 | 1_2:+4904355 | None:intergenic |
| GCAACTGCGCAACCTGGAAA+AGG | 0.498140 | 1_2:-4906367 | Msa0050880:CDS |
| TTTCCTATGGCAGATTGATA+GGG | 0.500022 | 1_2:-4903010 | Msa0050880:intron |
| ACCTGTACTCTCCTTGTAGT+TGG | 0.500127 | 1_2:+4905179 | None:intergenic |
| CTCGCTGATTAAATATATCA+AGG | 0.502133 | 1_2:+4906301 | None:intergenic |
| AACAAACCTCTCTTCCGTTA+CGG | 0.507246 | 1_2:+4909114 | None:intergenic |
| TGCGCATGCGTTAACGGTGG+TGG | 0.508686 | 1_2:-4909476 | Msa0050880:CDS |
| TTCCGTTACGGAGCTTGAAG+CGG | 0.515448 | 1_2:+4909126 | None:intergenic |
| GAGCAGTTAGCTGATACTGC+TGG | 0.517824 | 1_2:-4908367 | Msa0050880:CDS |
| CAGAAAATCAGACTAGAAGC+TGG | 0.519095 | 1_2:-4902976 | Msa0050880:CDS |
| CCTAGGACGTATATCGGCTC+TGG | 0.521174 | 1_2:-4907050 | Msa0050880:CDS |
| TGCTGCCTTCAGAGCCACAC+TGG | 0.528376 | 1_2:-4904615 | Msa0050880:CDS |
| TCAATCAGGAGGACAGGTGA+AGG | 0.530450 | 1_2:-4905758 | Msa0050880:CDS |
| CAACTTTAGATCCAACTACA+AGG | 0.530983 | 1_2:-4905190 | Msa0050880:CDS |
| GTACTGAGAGACGCCTGTTA+CGG | 0.534214 | 1_2:+4905418 | None:intergenic |
| TTAACAGGACTCCATGGTAT+GGG | 0.535370 | 1_2:-4902774 | Msa0050880:intron |
| TGTAACGTTAAGAGAGAAAG+AGG | 0.539755 | 1_2:+4909328 | None:intergenic |
| AGTTGCAAATAGTTTATCCT+CGG | 0.544687 | 1_2:+4905208 | None:intergenic |
| ACCAAGGATACCACTGGCAC+AGG | 0.550754 | 1_2:+4905396 | None:intergenic |
| TGAGCGTCAATCAGGAGGAC+AGG | 0.551278 | 1_2:-4905764 | Msa0050880:CDS |
| GACCGTGTTGAAAGCGTTGA+AGG | 0.552083 | 1_2:-4902228 | Msa0050880:three_prime_UTR |
| CGAGCAAGGGACATATATCA+AGG | 0.553171 | 1_2:-4902549 | Msa0050880:CDS |
| AACCGCTTCAAGCTCCGTAA+CGG | 0.554129 | 1_2:-4909128 | Msa0050880:CDS |
| ATTATAATTGTATATCTCGC+AGG | 0.557636 | 1_2:+4902342 | None:intergenic |
| TATTCTTTAACAGGACTCCA+TGG | 0.559078 | 1_2:-4902780 | Msa0050880:intron |
| TTTGTTACCATTTGAAAATG+GGG | 0.559718 | 1_2:-4902744 | Msa0050880:CDS |
| CACCATACACCAAGTTGGAA+TGG | 0.561527 | 1_2:-4902711 | Msa0050880:CDS |
| CAGAGCCGATATACGTCCTA+GGG | 0.562024 | 1_2:+4907051 | None:intergenic |
| CTGGTTGGTGTTGAGAGAAA+AGG | 0.565144 | 1_2:-4908436 | Msa0050880:CDS |
| TTTATCTGTTGCTCAGCCAG+GGG | 0.567413 | 1_2:+4904421 | None:intergenic |
| ATATAGGAATATACCGAGCA+AGG | 0.568191 | 1_2:-4902563 | Msa0050880:intron |
| CTTGGTGTATGGTGCTGAGA+AGG | 0.572248 | 1_2:+4902720 | None:intergenic |
| TGCAGTTCAAGACAAACTAA+AGG | 0.573803 | 1_2:-4902890 | Msa0050880:intron |
| CTCAGCACCATACACCAAGT+TGG | 0.574248 | 1_2:-4902716 | Msa0050880:CDS |
| TCCAACTACAAGGAGAGTAC+AGG | 0.574258 | 1_2:-4905180 | Msa0050880:intron |
| TAAGCAACCTCGCATAACGC+AGG | 0.575527 | 1_2:+4902516 | None:intergenic |
| TGTCCAGATGAAGAATGGAA+AGG | 0.575689 | 1_2:-4904819 | Msa0050880:intron |
| GTATGCATATCTGCCTTAAG+TGG | 0.578178 | 1_2:-4902937 | Msa0050880:CDS |
| GAAGAGAAAGCGTATCTGGT+TGG | 0.578497 | 1_2:-4908451 | Msa0050880:CDS |
| GTTTAAGAAAGTTAAGGTCG+TGG | 0.579779 | 1_2:+4902470 | None:intergenic |
| ATATCTGCCTTAAGTGGCAA+TGG | 0.584431 | 1_2:-4902931 | Msa0050880:CDS |
| AAAGTTGATGGTCTGGAACA+AGG | 0.588369 | 1_2:-4904353 | Msa0050880:intron |
| CTTGATATATGTCCCTTGCT+CGG | 0.592539 | 1_2:+4902550 | None:intergenic |
| ATCCTTCAACGCTTTCAACA+CGG | 0.608980 | 1_2:+4902226 | None:intergenic |
| CAAGCTCCGTAACGGAAGAG+AGG | 0.609194 | 1_2:-4909120 | Msa0050880:intron |
| AAGCAACCTCGCATAACGCA+GGG | 0.609480 | 1_2:+4902517 | None:intergenic |
| TATAGGAATATACCGAGCAA+GGG | 0.610221 | 1_2:-4902562 | Msa0050880:intron |
| AAACTAACCAAGGATACCAC+TGG | 0.610650 | 1_2:+4905390 | None:intergenic |
| TTTCTCCTAACAGACACTGT+TGG | 0.614231 | 1_2:-4904794 | Msa0050880:CDS |
| GGTATACTTCTGGTAAGTAG+AGG | 0.616128 | 1_2:+4908330 | None:intergenic |
| TGTTGTTACTGTTATCGTCG+TGG | 0.617453 | 1_2:+4909156 | None:intergenic |
| ACAGGACTCCATGGTATGGG+TGG | 0.618988 | 1_2:-4902771 | Msa0050880:intron |
| CAATCAGGAGGACAGGTGAA+GGG | 0.620912 | 1_2:-4905757 | Msa0050880:CDS |
| CAAAGCTTCCACCCATACCA+TGG | 0.623436 | 1_2:+4902763 | None:intergenic |
| TTATCTGTTGCTCAGCCAGG+GGG | 0.626944 | 1_2:+4904422 | None:intergenic |
| GGCTTGCTTCTCCAAACCCT+AGG | 0.630711 | 1_2:-4907067 | Msa0050880:CDS |
| CTCTGATATCTCCTCCAGTG+TGG | 0.631450 | 1_2:+4904601 | None:intergenic |
| TTTCATACATATCTGTCACT+AGG | 0.639014 | 1_2:-4902415 | Msa0050880:three_prime_UTR |
| ATAATTGTATATCTCGCAGG+TGG | 0.639130 | 1_2:+4902345 | None:intergenic |
| TGGAGCAGATGTTCTTGCCG+AGG | 0.641917 | 1_2:-4905225 | Msa0050880:CDS |
| TGAAGTTCTTCAGTGTTGTG+CGG | 0.644930 | 1_2:+4909305 | None:intergenic |
| TGCCTTCAGAGCCACACTGG+AGG | 0.649520 | 1_2:-4904612 | Msa0050880:CDS |
| TGATATATTTAATCAGCGAG+CGG | 0.651334 | 1_2:-4906298 | Msa0050880:CDS |
| CATCTTGAGCGTCAATCAGG+AGG | 0.655959 | 1_2:-4905769 | Msa0050880:CDS |
| TCTCTCAGTACCTGTGCCAG+TGG | 0.658454 | 1_2:-4905406 | Msa0050880:CDS |
| ATGTGCCCCTGCGTTATGCG+AGG | 0.667647 | 1_2:-4902523 | Msa0050880:CDS |
| CATACATATCTGTCACTAGG+TGG | 0.686262 | 1_2:-4902412 | Msa0050880:three_prime_UTR |
| TTGATGATGAGCTATCAGCT+GGG | 0.694886 | 1_2:-4906971 | Msa0050880:intron |
| AGCAACCTCGCATAACGCAG+GGG | 0.713675 | 1_2:+4902518 | None:intergenic |
| TGAGCAACAGATAAATGCTG+TGG | 0.729821 | 1_2:-4904413 | Msa0050880:CDS |
| AAATGCGCATGCGTTAACGG+TGG | 0.787822 | 1_2:-4909479 | Msa0050880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTTAAAAATAATAACAA+GGG | + | chr1_2:4904324-4904343 | None:intergenic | 10.0% |
| !! | AAAGTTTAAAAATAATAACA+AGG | + | chr1_2:4904325-4904344 | None:intergenic | 10.0% |
| !! | TAAATATGCAATTAATATAA+AGG | + | chr1_2:4904803-4904822 | None:intergenic | 10.0% |
| !! | TAATAACACAATATATAATT+CGG | + | chr1_2:4905823-4905842 | None:intergenic | 10.0% |
| !! | TCTCAAAAAAAAAAAAAAAA+AGG | + | chr1_2:4907537-4907556 | None:intergenic | 10.0% |
| !!! | AAATTGTAATAGTTTTGATT+CGG | - | chr1_2:4903254-4903273 | Msa0050880:intron | 15.0% |
| !! | ATATGAAATTGAAAACAATT+TGG | + | chr1_2:4903660-4903679 | None:intergenic | 15.0% |
| !! | TGATGATAATTATTAATTGA+AGG | - | chr1_2:4904162-4904181 | Msa0050880:intron | 15.0% |
| !! | GATGATAATTATTAATTGAA+GGG | - | chr1_2:4904163-4904182 | Msa0050880:intron | 15.0% |
| !!! | AATAATAAATTGTTCCTTTT+GGG | + | chr1_2:4905283-4905302 | None:intergenic | 15.0% |
| !!! | TAATAATAAATTGTTCCTTT+TGG | + | chr1_2:4905284-4905303 | None:intergenic | 15.0% |
| !! | CAGGTAATTATAAATTAAAA+AGG | - | chr1_2:4905486-4905505 | Msa0050880:intron | 15.0% |
| !! | GTAATTATAAATTAAAAAGG+AGG | - | chr1_2:4905489-4905508 | Msa0050880:intron | 15.0% |
| !! | ATATAAACATAAAATACCAT+AGG | + | chr1_2:4905650-4905669 | None:intergenic | 15.0% |
| !! | AATAACACAATATATAATTC+GGG | + | chr1_2:4905822-4905841 | None:intergenic | 15.0% |
| !! | TTATAAGAAAAAAAGTTCTA+GGG | + | chr1_2:4906226-4906245 | None:intergenic | 15.0% |
| !!! | TAAATGATGATATGAAATTT+TGG | + | chr1_2:4906739-4906758 | None:intergenic | 15.0% |
| !! | TGTTATGAATAGAATTAATT+CGG | + | chr1_2:4907584-4907603 | None:intergenic | 15.0% |
| !! | AGATCATCATTATTATTTAT+TGG | - | chr1_2:4908083-4908102 | Msa0050880:intron | 15.0% |
| !! | GATCATCATTATTATTTATT+GGG | - | chr1_2:4908084-4908103 | Msa0050880:intron | 15.0% |
| !!! | GAATTAATTTTAAAGCATTA+TGG | + | chr1_2:4908116-4908135 | None:intergenic | 15.0% |
| !!! | TTTCTTCTTTTTTTTAAGCT+TGG | + | chr1_2:4902557-4902576 | None:intergenic | 20.0% |
| !! | AAACATCTAATAGATTGAAA+TGG | + | chr1_2:4902689-4902708 | None:intergenic | 20.0% |
| !! | AGTTACAACAATAATTAGTT+AGG | - | chr1_2:4902741-4902760 | Msa0050880:CDS | 20.0% |
| !!! | TAATTGTTGTTTACATGAAA+CGG | + | chr1_2:4903179-4903198 | None:intergenic | 20.0% |
| !!! | TTTCAAGTTTTCACATAAAT+TGG | - | chr1_2:4903534-4903553 | Msa0050880:intron | 20.0% |
| !!! | ATTATTGTTTAAAATCGCTT+TGG | - | chr1_2:4903752-4903771 | Msa0050880:intron | 20.0% |
| !! | ATGAAAATGAAAATATGGTT+GGG | + | chr1_2:4904036-4904055 | None:intergenic | 20.0% |
| !! | AATGAAAATGAAAATATGGT+TGG | + | chr1_2:4904037-4904056 | None:intergenic | 20.0% |
| !! | TCACAATGAAAATGAAAATA+TGG | + | chr1_2:4904041-4904060 | None:intergenic | 20.0% |
| !!! | ACCACAAAAAGTATTTATAA+GGG | - | chr1_2:4904398-4904417 | Msa0050880:CDS | 20.0% |
| !!! | AAATACATGATTATTGGTTA+TGG | + | chr1_2:4904538-4904557 | None:intergenic | 20.0% |
| !! | GAGAATAAATACATGATTAT+TGG | + | chr1_2:4904544-4904563 | None:intergenic | 20.0% |
| !!! | ACTTTTAATTTTCAGTAAGA+AGG | - | chr1_2:4905139-4905158 | Msa0050880:intron | 20.0% |
| !! | TGGATCTATAAAAAACATAA+AGG | + | chr1_2:4905211-4905230 | None:intergenic | 20.0% |
| !!! | AGTATCCTTTGTTTTTAATA+GGG | - | chr1_2:4905519-4905538 | Msa0050880:intron | 20.0% |
| !! | ATAACACAATATATAATTCG+GGG | + | chr1_2:4905821-4905840 | None:intergenic | 20.0% |
| !! | GTTATAAGAAAAAAAGTTCT+AGG | + | chr1_2:4906227-4906246 | None:intergenic | 20.0% |
| !! | ATTAAGAAAAGAATAGAAGT+TGG | + | chr1_2:4906705-4906724 | None:intergenic | 20.0% |
| !!! | TGTTACAAATTATTTTGCTT+TGG | - | chr1_2:4907014-4907033 | Msa0050880:CDS | 20.0% |
| !!! | GTTACAAATTATTTTGCTTT+GGG | - | chr1_2:4907015-4907034 | Msa0050880:CDS | 20.0% |
| !!! | CATTTTATTTTATCGAGAAA+AGG | - | chr1_2:4907223-4907242 | Msa0050880:intron | 20.0% |
| !! | GAATTCATTATAAAACTTGA+AGG | + | chr1_2:4907466-4907485 | None:intergenic | 20.0% |
| !!! | AATGCTTTAAAATTAATTCC+TGG | - | chr1_2:4908117-4908136 | Msa0050880:intron | 20.0% |
| !! | TAAAATTAATTCCTGGATTA+TGG | - | chr1_2:4908124-4908143 | Msa0050880:intron | 20.0% |
| !! | ATAAACCATATTTGGATAAT+TGG | + | chr1_2:4908458-4908477 | None:intergenic | 20.0% |
| !! | TATCGAAATCATATTAAAAC+AGG | + | chr1_2:4908890-4908909 | None:intergenic | 20.0% |
| !!! | ATGTAAATAGTTCTAACAAA+TGG | + | chr1_2:4908922-4908941 | None:intergenic | 20.0% |
| !! | AAATTCTGTTATTCTTTAAC+AGG | - | chr1_2:4908952-4908971 | Msa0050880:intron | 20.0% |
| !!! | ATTTTATAGGATTCGTATAT+AGG | - | chr1_2:4909162-4909181 | Msa0050880:CDS | 20.0% |
| !! | TTACATGTTTAAGAAAGTTA+AGG | + | chr1_2:4909280-4909299 | None:intergenic | 20.0% |
| ! | TTCTTGAATTGGAAGTAAAA+CGG | + | chr1_2:4902488-4902507 | None:intergenic | 25.0% |
| !!! | ATCTGCTATTTTTTAGCAAA+TGG | + | chr1_2:4902897-4902916 | None:intergenic | 25.0% |
| ! | AGCTATAAACTACTTGAATT+AGG | - | chr1_2:4902982-4903001 | Msa0050880:CDS | 25.0% |
| ! | TGCAACTTCAATTTCAAATT+TGG | - | chr1_2:4903450-4903469 | Msa0050880:intron | 25.0% |
| ! | ATAGATATCGTGAATATTTC+AGG | - | chr1_2:4903481-4903500 | Msa0050880:intron | 25.0% |
| ! | TTCCAGTAAAATAATCACTT+TGG | + | chr1_2:4903512-4903531 | None:intergenic | 25.0% |
| ! | ATTTAATGGAGTTGTTAATC+TGG | + | chr1_2:4903566-4903585 | None:intergenic | 25.0% |
| ! | ACTTATGCTATAGCATTTAA+TGG | + | chr1_2:4903580-4903599 | None:intergenic | 25.0% |
| !! | TAAAAAGTACATATAAAGCC+AGG | + | chr1_2:4904006-4904025 | None:intergenic | 25.0% |
| !! | TTTCATTTTCATTGTGAGTT+TGG | - | chr1_2:4904044-4904063 | Msa0050880:intron | 25.0% |
| !! | TTTTCTTAATCTGTGTGAAA+TGG | + | chr1_2:4904259-4904278 | None:intergenic | 25.0% |
| ! | TAAAGATGAAAGAAAGAGAA+TGG | - | chr1_2:4904282-4904301 | Msa0050880:intron | 25.0% |
| !!! | GACCACAAAAAGTATTTATA+AGG | - | chr1_2:4904397-4904416 | Msa0050880:CDS | 25.0% |
| !!! | CCACAAAAAGTATTTATAAG+GGG | - | chr1_2:4904399-4904418 | Msa0050880:CDS | 25.0% |
| !!! | GACAAATATTTTTTCCAAAC+AGG | - | chr1_2:4904471-4904490 | Msa0050880:intron | 25.0% |
| ! | AGACTTAATCTAAATGTTAC+AGG | - | chr1_2:4904653-4904672 | Msa0050880:intron | 25.0% |
| !!! | TTTCCATACTACCATTTTTT+TGG | - | chr1_2:4904837-4904856 | Msa0050880:intron | 25.0% |
| ! | TAGTAAACATATCACTCTTA+TGG | + | chr1_2:4904979-4904998 | None:intergenic | 25.0% |
| !! | GGAGGATTTGTTTAAAAATT+TGG | - | chr1_2:4905086-4905105 | Msa0050880:intron | 25.0% |
| !!! | TTTAATTTTCAGTAAGAAGG+TGG | - | chr1_2:4905142-4905161 | Msa0050880:intron | 25.0% |
| ! | CTATTAAAAACAAAGGATAC+TGG | + | chr1_2:4905520-4905539 | None:intergenic | 25.0% |
| !!! | CAGTATCCTTTGTTTTTAAT+AGG | - | chr1_2:4905518-4905537 | Msa0050880:intron | 25.0% |
| ! | TGATACCCTATTAAAAACAA+AGG | + | chr1_2:4905527-4905546 | None:intergenic | 25.0% |
| ! | ACTAATAAGTATCACTGATA+AGG | - | chr1_2:4905546-4905565 | Msa0050880:intron | 25.0% |
| ! | AAATATTGATCAAAGGATAC+TGG | + | chr1_2:4905580-4905599 | None:intergenic | 25.0% |
| ! | AGTATCCTTTGATCAATATT+TGG | - | chr1_2:4905579-4905598 | Msa0050880:intron | 25.0% |
| ! | GCATTTATATGTCAATTAAG+TGG | + | chr1_2:4905614-4905633 | None:intergenic | 25.0% |
| ! | TTGACATATAAATGCAAAAG+AGG | - | chr1_2:4905619-4905638 | Msa0050880:intron | 25.0% |
| ! | GATAATAATGTATGCTTACT+TGG | + | chr1_2:4906055-4906074 | None:intergenic | 25.0% |
| !!! | ATGCATTTCTCTAAAATTTG+TGG | - | chr1_2:4906189-4906208 | Msa0050880:intron | 25.0% |
| ! | TTCTTATAACATCTAATGCA+TGG | - | chr1_2:4906237-4906256 | Msa0050880:intron | 25.0% |
| ! | TCTTATAACATCTAATGCAT+GGG | - | chr1_2:4906238-4906257 | Msa0050880:intron | 25.0% |
| ! | CATAGATTACCATAATACAA+AGG | + | chr1_2:4906408-4906427 | None:intergenic | 25.0% |
| ! | GCATATATCATCATCTTATA+AGG | + | chr1_2:4906431-4906450 | None:intergenic | 25.0% |
| !! | TGAAATTGTCACTTATGTAA+AGG | - | chr1_2:4907634-4907653 | Msa0050880:intron | 25.0% |
| ! | TTATGAACAAACTATCCTAA+AGG | + | chr1_2:4907763-4907782 | None:intergenic | 25.0% |
| ! | AACAAATCAGCTAAGATAAA+TGG | - | chr1_2:4907862-4907881 | Msa0050880:intron | 25.0% |
| !!! | TTTTCTTGTTATAACATGTC+TGG | + | chr1_2:4907930-4907949 | None:intergenic | 25.0% |
| ! | ATCTTAAAATGTTGTCATAC+TGG | - | chr1_2:4908018-4908037 | Msa0050880:intron | 25.0% |
| ! | AAACTATAAGAGAACCTATT+TGG | - | chr1_2:4908405-4908424 | Msa0050880:CDS | 25.0% |
| ! | AACTATAAGAGAACCTATTT+GGG | - | chr1_2:4908406-4908425 | Msa0050880:CDS | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | + | chr1_2:4908466-4908485 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | - | chr1_2:4908470-4908489 | Msa0050880:intron | 25.0% |
| ! | AATATGATTTCGATATCATG+TGG | - | chr1_2:4908895-4908914 | Msa0050880:intron | 25.0% |
| ! | TTAGAACTATTTACATTTGC+TGG | - | chr1_2:4908926-4908945 | Msa0050880:intron | 25.0% |
| ! | CTTTGTTACCATTTGAAAAT+GGG | - | chr1_2:4908996-4909015 | Msa0050880:intron | 25.0% |
| ! | TTTGTTACCATTTGAAAATG+GGG | - | chr1_2:4908997-4909016 | Msa0050880:intron | 25.0% |
| !!! | GTTTTCCTATTTGTTATTGT+TGG | - | chr1_2:4909129-4909148 | Msa0050880:CDS | 25.0% |
| ! | GAAATCCAACAATAACAAAT+AGG | + | chr1_2:4909137-4909156 | None:intergenic | 25.0% |
| !! | TGGATTTCCTAACATTTTAT+AGG | - | chr1_2:4909149-4909168 | Msa0050880:CDS | 25.0% |
| ! | TACGAATCCTATAAAATGTT+AGG | + | chr1_2:4909159-4909178 | None:intergenic | 25.0% |
| ! | ATTATAATTGTATATCTCGC+AGG | + | chr1_2:4909402-4909421 | None:intergenic | 25.0% |
| GATTGTTCTTGTTCTTGAAT+TGG | + | chr1_2:4902499-4902518 | None:intergenic | 30.0% | |
| !!! | CTTTTTTTTAAGCTTGGTAG+TGG | + | chr1_2:4902551-4902570 | None:intergenic | 30.0% |
| AACTACTAACTAACTGGTTA+AGG | + | chr1_2:4902725-4902744 | None:intergenic | 30.0% | |
| TGTTGTAACTACTAACTAAC+TGG | + | chr1_2:4902731-4902750 | None:intergenic | 30.0% | |
| TAGTAGTTAGTTACACTAGT+AGG | - | chr1_2:4902850-4902869 | Msa0050880:intron | 30.0% | |
| !!! | TGCTATTTTTTAGCAAATGG+AGG | + | chr1_2:4902894-4902913 | None:intergenic | 30.0% |
| CTGATTGAATTTGTAGTGTT+TGG | - | chr1_2:4902950-4902969 | Msa0050880:CDS | 30.0% | |
| ! | GACTAGTTAGTTGTACTTAT+TGG | - | chr1_2:4903130-4903149 | Msa0050880:intron | 30.0% |
| ATCGAAACATATACTGATCA+AGG | + | chr1_2:4903205-4903224 | None:intergenic | 30.0% | |
| !!! | ATAGTTTTGATTCGGTTTGT+AGG | - | chr1_2:4903262-4903281 | Msa0050880:intron | 30.0% |
| AGAAGATTCTTTGAGTGAAT+TGG | - | chr1_2:4903352-4903371 | Msa0050880:intron | 30.0% | |
| AAGAAGAAATGGTATACTTC+TGG | + | chr1_2:4903424-4903443 | None:intergenic | 30.0% | |
| TTGCAGAGTAAAAGAAGAAA+TGG | + | chr1_2:4903435-4903454 | None:intergenic | 30.0% | |
| !! | CACCAAAGTGATTATTTTAC+TGG | - | chr1_2:4903507-4903526 | Msa0050880:intron | 30.0% |
| ! | TTTAAAATCGCTTTGGATTG+TGG | - | chr1_2:4903759-4903778 | Msa0050880:intron | 30.0% |
| !! | CAAAGGCATTGAAATATGAT+TGG | - | chr1_2:4903790-4903809 | Msa0050880:intron | 30.0% |
| TCATATAGCCAAAAAGAAAG+CGG | + | chr1_2:4903903-4903922 | None:intergenic | 30.0% | |
| ! | ATTTTCATTGTGAGTTTGGT+TGG | - | chr1_2:4904048-4904067 | Msa0050880:intron | 30.0% |
| ! | TTCCACTACAAACTTTTACA+TGG | - | chr1_2:4904373-4904392 | Msa0050880:CDS | 30.0% |
| !! | CCCCTTATAAATACTTTTTG+TGG | + | chr1_2:4904402-4904421 | None:intergenic | 30.0% |
| TCCTGCTTAAAAATTTGAGA+AGG | - | chr1_2:4904435-4904454 | Msa0050880:intron | 30.0% | |
| !! | ACCTTCTCAAATTTTTAAGC+AGG | + | chr1_2:4904439-4904458 | None:intergenic | 30.0% |
| CTTAAAAATTTGAGAAGGTC+AGG | - | chr1_2:4904440-4904459 | Msa0050880:intron | 30.0% | |
| ! | TAAGAGTGCAATTAATGCAT+TGG | - | chr1_2:4904729-4904748 | Msa0050880:intron | 30.0% |
| CAACCAAAAAAATGGTAGTA+TGG | + | chr1_2:4904843-4904862 | None:intergenic | 30.0% | |
| TCTAACGTCAACCAAAAAAA+TGG | + | chr1_2:4904851-4904870 | None:intergenic | 30.0% | |
| TTACTGAAGTAGTTCATCTT+CGG | - | chr1_2:4904880-4904899 | Msa0050880:intron | 30.0% | |
| !! | TGTTTACTAGCTTTGATTTG+AGG | - | chr1_2:4904990-4905009 | Msa0050880:intron | 30.0% |
| AGTATAAGCGAGTGATTATT+TGG | - | chr1_2:4905114-4905133 | Msa0050880:intron | 30.0% | |
| TATAGTTGCATTGTTGTGTA+AGG | - | chr1_2:4905302-4905321 | Msa0050880:intron | 30.0% | |
| ! | CTCGCTGATTAAATATATCA+AGG | + | chr1_2:4905443-4905462 | None:intergenic | 30.0% |
| TGATATATTTAATCAGCGAG+CGG | - | chr1_2:4905443-4905462 | Msa0050880:CDS | 30.0% | |
| AATAAGTATCACTGATAAGG+AGG | - | chr1_2:4905549-4905568 | Msa0050880:intron | 30.0% | |
| CATTGCCAAATATTGATCAA+AGG | + | chr1_2:4905587-4905606 | None:intergenic | 30.0% | |
| AAGGTAGAGTTATCAGAATA+GGG | + | chr1_2:4905884-4905903 | None:intergenic | 30.0% | |
| !!! | TCTACCTTCTTTTGATTTCT+AGG | - | chr1_2:4905896-4905915 | Msa0050880:intron | 30.0% |
| CATTGTCAAATTTATCTGCA+AGG | - | chr1_2:4906079-4906098 | Msa0050880:intron | 30.0% | |
| GCATAATGTATGAAACTAGT+AGG | + | chr1_2:4906173-4906192 | None:intergenic | 30.0% | |
| AAAAAGAGCTAGAATCTGTT+AGG | - | chr1_2:4906283-4906302 | Msa0050880:CDS | 30.0% | |
| CTGATATTGCCTTTGTATTA+TGG | - | chr1_2:4906396-4906415 | Msa0050880:intron | 30.0% | |
| ! | ATGCTAATTGCCATCATTTT+AGG | - | chr1_2:4906447-4906466 | Msa0050880:intron | 30.0% |
| !! | TAATTGCCATCATTTTAGGT+TGG | - | chr1_2:4906451-4906470 | Msa0050880:intron | 30.0% |
| GTATAACCAACCTAAAATGA+TGG | + | chr1_2:4906460-4906479 | None:intergenic | 30.0% | |
| ! | ACGCTTTTGAATCAATTAAC+TGG | - | chr1_2:4906496-4906515 | Msa0050880:intron | 30.0% |
| AGTTGCAAATAGTTTATCCT+CGG | + | chr1_2:4906536-4906555 | None:intergenic | 30.0% | |
| ATAAAAATGCGATATCATCC+AGG | + | chr1_2:4906601-4906620 | None:intergenic | 30.0% | |
| ATCTTTCTTACTAGTGTAGT+AGG | + | chr1_2:4906989-4907008 | None:intergenic | 30.0% | |
| ATCATCAATTCCAAAGTTGA+TGG | - | chr1_2:4907376-4907395 | Msa0050880:intron | 30.0% | |
| !!! | TATTGGGAAAATGGTTTTGT+TGG | - | chr1_2:4907411-4907430 | Msa0050880:intron | 30.0% |
| AAACTGCAATAGTTGTGTAA+AGG | + | chr1_2:4907441-4907460 | None:intergenic | 30.0% | |
| GAATTAATTCGGAGTTAACA+AGG | + | chr1_2:4907573-4907592 | None:intergenic | 30.0% | |
| AAAACCTATACCACATTACT+TGG | - | chr1_2:4907609-4907628 | Msa0050880:intron | 30.0% | |
| AAACCTATACCACATTACTT+GGG | - | chr1_2:4907610-4907629 | Msa0050880:intron | 30.0% | |
| !! | TTATGTAAAGGACTAGCTTA+AGG | - | chr1_2:4907646-4907665 | Msa0050880:intron | 30.0% |
| !! | TTTTAGCAGTTTAGAATGAG+GGG | + | chr1_2:4907844-4907863 | None:intergenic | 30.0% |
| !! | GTTTTAGCAGTTTAGAATGA+GGG | + | chr1_2:4907845-4907864 | None:intergenic | 30.0% |
| !!! | TGTTTTAGCAGTTTAGAATG+AGG | + | chr1_2:4907846-4907865 | None:intergenic | 30.0% |
| ATCAGCTAAGATAAATGGAT+CGG | - | chr1_2:4907867-4907886 | Msa0050880:intron | 30.0% | |
| ! | TTGTCCTTGTTTCAAACAAA+AGG | - | chr1_2:4907894-4907913 | Msa0050880:intron | 30.0% |
| ! | TGTCCTTGTTTCAAACAAAA+GGG | - | chr1_2:4907895-4907914 | Msa0050880:intron | 30.0% |
| TTGTTCATCAGTTTCTCATA+AGG | - | chr1_2:4908183-4908202 | Msa0050880:intron | 30.0% | |
| AGTCAGATTACAAGAGATAA+AGG | - | chr1_2:4908371-4908390 | Msa0050880:CDS | 30.0% | |
| ! | GGTTCTCTTATAGTTTTTCT+AGG | + | chr1_2:4908401-4908420 | None:intergenic | 30.0% |
| AACCTATTTGGGAAGATTTA+GGG | - | chr1_2:4908417-4908436 | Msa0050880:CDS | 30.0% | |
| TGGATCCAATTATCCAAATA+TGG | - | chr1_2:4908450-4908469 | Msa0050880:CDS | 30.0% | |
| AGTCACTCTGTTAATTCTTT+AGG | - | chr1_2:4908625-4908644 | Msa0050880:intron | 30.0% | |
| ! | GCTTTGTTACCATTTGAAAA+TGG | - | chr1_2:4908995-4909014 | Msa0050880:intron | 30.0% |
| !!! | TTTTTTCAACCATTCCAACT+TGG | + | chr1_2:4909042-4909061 | None:intergenic | 30.0% |
| TTTCATACATATCTGTCACT+AGG | - | chr1_2:4909326-4909345 | Msa0050880:CDS | 30.0% | |
| ATTAGCAAGCCCTTAAAAAT+GGG | - | chr1_2:4909490-4909509 | Msa0050880:exon | 30.0% | |
| GTTAAGAGAGAAAGAGGATA+AGG | + | chr1_2:4902410-4902429 | None:intergenic | 35.0% | |
| TGTAACGTTAAGAGAGAAAG+AGG | + | chr1_2:4902416-4902435 | None:intergenic | 35.0% | |
| ! | ATTTTTACACGAGCTCATAG+TGG | + | chr1_2:4903008-4903027 | None:intergenic | 35.0% |
| AAGAGAAAAACTGGAGCTTA+TGG | + | chr1_2:4903090-4903109 | None:intergenic | 35.0% | |
| ! | AGGTTTGGTAAGAGAAAAAC+TGG | + | chr1_2:4903099-4903118 | None:intergenic | 35.0% |
| ! | TAACTAGTCTAACTTAGTGC+AGG | + | chr1_2:4903119-4903138 | None:intergenic | 35.0% |
| !! | TTTTGAAGAGAAAGCGTATC+TGG | - | chr1_2:4903286-4903305 | Msa0050880:intron | 35.0% |
| GGTGAAGTTAGTGATTCATT+TGG | - | chr1_2:4903326-4903345 | Msa0050880:intron | 35.0% | |
| ATGGAGTTGTTAATCTGGAT+AGG | + | chr1_2:4903561-4903580 | None:intergenic | 35.0% | |
| ! | GTTGAATACCGCTTTCTTTT+TGG | - | chr1_2:4903892-4903911 | Msa0050880:intron | 35.0% |
| TCAGTAATGTCTCCATAACT+GGG | + | chr1_2:4904098-4904117 | None:intergenic | 35.0% | |
| ATCAGTAATGTCTCCATAAC+TGG | + | chr1_2:4904099-4904118 | None:intergenic | 35.0% | |
| !! | TCAAGTAGGTCAAGTATTGA+GGG | + | chr1_2:4904236-4904255 | None:intergenic | 35.0% |
| CTCCATGTAAAAGTTTGTAG+TGG | + | chr1_2:4904378-4904397 | None:intergenic | 35.0% | |
| ! | TTCCCTTTTTCTTCTCCTAT+TGG | - | chr1_2:4904601-4904620 | Msa0050880:CDS | 35.0% |
| ! | TCCCTTTTTCTTCTCCTATT+GGG | - | chr1_2:4904602-4904621 | Msa0050880:CDS | 35.0% |
| TCCCAATAGGAGAAGAAAAA+GGG | + | chr1_2:4904606-4904625 | None:intergenic | 35.0% | |
| ! | AAGTCTGAAACTGAGTCATA+TGG | + | chr1_2:4904639-4904658 | None:intergenic | 35.0% |
| !! | TGTCTACTAGCTTTGATTTG+AGG | - | chr1_2:4904944-4904963 | Msa0050880:intron | 35.0% |
| !! | TAGCTTTGATTTGAGGTCAT+TGG | - | chr1_2:4904951-4904970 | Msa0050880:intron | 35.0% |
| !! | TAGCTTTGATTTGAGGTCAT+TGG | - | chr1_2:4904951-4904970 | Msa0050880:intron | 35.0% |
| TGCTCTACTTTGCATTGTAT+CGG | - | chr1_2:4905239-4905258 | Msa0050880:CDS | 35.0% | |
| ! | AACACATGAAGCATCTTTAC+AGG | - | chr1_2:4905467-4905486 | Msa0050880:CDS | 35.0% |
| AGGTAGAGTTATCAGAATAG+GGG | + | chr1_2:4905883-4905902 | None:intergenic | 35.0% | |
| GAAGGTAGAGTTATCAGAAT+AGG | + | chr1_2:4905885-4905904 | None:intergenic | 35.0% | |
| GCAACCTAGAAATCAAAAGA+AGG | + | chr1_2:4905903-4905922 | None:intergenic | 35.0% | |
| ! | TTTTTGTTAGACGAGGTAGT+TGG | + | chr1_2:4905944-4905963 | None:intergenic | 35.0% |
| TACCTCGTCTAACAAAAATG+TGG | - | chr1_2:4905946-4905965 | Msa0050880:intron | 35.0% | |
| GGGTGAAAAACAAATAGAAG+TGG | - | chr1_2:4906010-4906029 | Msa0050880:intron | 35.0% | |
| CAACTTTAGATCCAACTACA+AGG | - | chr1_2:4906551-4906570 | Msa0050880:intron | 35.0% | |
| CAGGTCTGTAAAAAATTACC+TGG | - | chr1_2:4906580-4906599 | Msa0050880:intron | 35.0% | |
| AACCTAGACATTGTCTTCAT+TGG | - | chr1_2:4906625-4906644 | Msa0050880:intron | 35.0% | |
| GAGGAAATGACTATGATGTA+AGG | + | chr1_2:4906762-4906781 | None:intergenic | 35.0% | |
| TAAAACCAACAGTGTCTGTT+AGG | + | chr1_2:4906955-4906974 | None:intergenic | 35.0% | |
| ! | GATATCAGAGTCATCACTTT+TGG | - | chr1_2:4907153-4907172 | Msa0050880:intron | 35.0% |
| TAGAAGAACTAGACAACTTC+TGG | - | chr1_2:4907250-4907269 | Msa0050880:intron | 35.0% | |
| CAATTTCATCCCAAGTAATG+TGG | + | chr1_2:4907622-4907641 | None:intergenic | 35.0% | |
| AACCAATTGCTTAAGCCTTT+AGG | - | chr1_2:4907745-4907764 | Msa0050880:intron | 35.0% | |
| ATCCTAAAGGCTTAAGCAAT+TGG | + | chr1_2:4907750-4907769 | None:intergenic | 35.0% | |
| !! | AAGCCCTTTTGTTTGAAACA+AGG | + | chr1_2:4907901-4907920 | None:intergenic | 35.0% |
| AGAAGCAATAAGCATGTGAA+TGG | + | chr1_2:4907953-4907972 | None:intergenic | 35.0% | |
| TTCACATGCTTATTGCTTCT+AGG | - | chr1_2:4907953-4907972 | Msa0050880:intron | 35.0% | |
| TATGCATAAAGTAAGCGTAG+CGG | - | chr1_2:4908210-4908229 | Msa0050880:intron | 35.0% | |
| ACAACATTAGAGAGAGAGTT+TGG | - | chr1_2:4908290-4908309 | Msa0050880:intron | 35.0% | |
| CAACATTAGAGAGAGAGTTT+GGG | - | chr1_2:4908291-4908310 | Msa0050880:intron | 35.0% | |
| ! | GAGAAGACTTGTAGATTTTG+TGG | - | chr1_2:4908322-4908341 | Msa0050880:intron | 35.0% |
| ! | GACTTGTAGATTTTGTGGTA+AGG | - | chr1_2:4908327-4908346 | Msa0050880:intron | 35.0% |
| GAACCTATTTGGGAAGATTT+AGG | - | chr1_2:4908416-4908435 | Msa0050880:CDS | 35.0% | |
| ATCCCTAAATCTTCCCAAAT+AGG | + | chr1_2:4908422-4908441 | None:intergenic | 35.0% | |
| AGATTTAGGGATCAATGAGT+TGG | - | chr1_2:4908430-4908449 | Msa0050880:CDS | 35.0% | |
| CACTCTGTTAATTCTTTAGG+AGG | - | chr1_2:4908628-4908647 | Msa0050880:intron | 35.0% | |
| TGAATCAGTTCTTCCTTTAC+CGG | - | chr1_2:4908653-4908672 | Msa0050880:intron | 35.0% | |
| ! | TCTGGCATATCTTTTTCCTA+TGG | - | chr1_2:4908718-4908737 | Msa0050880:intron | 35.0% |
| ! | TTTTCCTATGGCAGATTGAT+AGG | - | chr1_2:4908730-4908749 | Msa0050880:intron | 35.0% |
| TTTCCTATGGCAGATTGATA+GGG | - | chr1_2:4908731-4908750 | Msa0050880:intron | 35.0% | |
| ! | AGCTTCTAGTCTGATTTTCT+GGG | + | chr1_2:4908766-4908785 | None:intergenic | 35.0% |
| TGCAGTTCAAGACAAACTAA+AGG | - | chr1_2:4908851-4908870 | Msa0050880:intron | 35.0% | |
| TATTCTTTAACAGGACTCCA+TGG | - | chr1_2:4908961-4908980 | Msa0050880:intron | 35.0% | |
| ATATAGGAATATACCGAGCA+AGG | - | chr1_2:4909178-4909197 | Msa0050880:CDS | 35.0% | |
| TATAGGAATATACCGAGCAA+GGG | - | chr1_2:4909179-4909198 | Msa0050880:CDS | 35.0% | |
| GTTTAAGAAAGTTAAGGTCG+TGG | + | chr1_2:4909274-4909293 | None:intergenic | 35.0% | |
| ATAATTGTATATCTCGCAGG+TGG | + | chr1_2:4909399-4909418 | None:intergenic | 35.0% | |
| ! | ATAATGACTTGCAGCATAAC+AGG | - | chr1_2:4909417-4909436 | Msa0050880:CDS | 35.0% |
| GATTAGCAAGCCCTTAAAAA+TGG | - | chr1_2:4909489-4909508 | Msa0050880:exon | 35.0% | |
| TTAGCAAGCCCTTAAAAATG+GGG | - | chr1_2:4909491-4909510 | Msa0050880:exon | 35.0% | |
| ATGAAATGCGCATGCGTTAA+CGG | - | chr1_2:4902259-4902278 | Msa0050880:three_prime_UTR | 40.0% | |
| TGAAGTTCTTCAGTGTTGTG+CGG | + | chr1_2:4902439-4902458 | None:intergenic | 40.0% | |
| !! | GTAGTGGCTTTATCTTCATC+GGG | + | chr1_2:4902535-4902554 | None:intergenic | 40.0% |
| !! | GGTAGTGGCTTTATCTTCAT+CGG | + | chr1_2:4902536-4902555 | None:intergenic | 40.0% |
| TGTTGTTACTGTTATCGTCG+TGG | + | chr1_2:4902588-4902607 | None:intergenic | 40.0% | |
| AACAAACCTCTCTTCCGTTA+CGG | + | chr1_2:4902630-4902649 | None:intergenic | 40.0% | |
| GCTGATAACCTTCCTTATAG+CGG | - | chr1_2:4902918-4902937 | Msa0050880:CDS | 40.0% | |
| CTGATAACCTTCCTTATAGC+GGG | - | chr1_2:4902919-4902938 | Msa0050880:CDS | 40.0% | |
| TGATAACCTTCCTTATAGCG+GGG | - | chr1_2:4902920-4902939 | Msa0050880:CDS | 40.0% | |
| AGTCTAACTTAGTGCAGGTT+TGG | + | chr1_2:4903114-4903133 | None:intergenic | 40.0% | |
| AGCTGATACTGCTGGATTAT+TGG | - | chr1_2:4903382-4903401 | Msa0050880:intron | 40.0% | |
| GGTATACTTCTGGTAAGTAG+AGG | + | chr1_2:4903414-4903433 | None:intergenic | 40.0% | |
| GGATTGTGGTAACACATCAA+AGG | - | chr1_2:4903773-4903792 | Msa0050880:intron | 40.0% | |
| CAGTAATGTCTCCATAACTG+GGG | + | chr1_2:4904097-4904116 | None:intergenic | 40.0% | |
| TCATCAGCATGATGAAACAG+AGG | + | chr1_2:4904148-4904167 | None:intergenic | 40.0% | |
| ! | GTCAAGTAGGTCAAGTATTG+AGG | + | chr1_2:4904237-4904256 | None:intergenic | 40.0% |
| TCTGTGTGAAATGGTCAAGT+AGG | + | chr1_2:4904250-4904269 | None:intergenic | 40.0% | |
| ! | TTTGAGAAGGTCAGGTATTG+TGG | - | chr1_2:4904448-4904467 | Msa0050880:intron | 40.0% |
| ! | TTGAGAAGGTCAGGTATTGT+GGG | - | chr1_2:4904449-4904468 | Msa0050880:intron | 40.0% |
| ! | TCCAAACAGGTCAAGTATTG+AGG | - | chr1_2:4904484-4904503 | Msa0050880:intron | 40.0% |
| !! | CCAAACAGGTCAAGTATTGA+GGG | - | chr1_2:4904485-4904504 | Msa0050880:intron | 40.0% |
| GTCCCAATAGGAGAAGAAAA+AGG | + | chr1_2:4904607-4904626 | None:intergenic | 40.0% | |
| TGGCAATATGTTGTCCCAAT+AGG | + | chr1_2:4904619-4904638 | None:intergenic | 40.0% | |
| !! | TTTGATGATGAGCTATCAGC+TGG | - | chr1_2:4904769-4904788 | Msa0050880:CDS | 40.0% |
| !! | TTGATGATGAGCTATCAGCT+GGG | - | chr1_2:4904770-4904789 | Msa0050880:CDS | 40.0% |
| TCATTGGAACTATAAGAGCC+AGG | - | chr1_2:4905056-4905075 | Msa0050880:intron | 40.0% | |
| ! | TTTTCAGTAAGAAGGTGGTG+AGG | - | chr1_2:4905147-4905166 | Msa0050880:intron | 40.0% |
| !! | AACCTGGAAAAGGTTTTTGG+TGG | - | chr1_2:4905384-4905403 | Msa0050880:intron | 40.0% |
| TGCAAAAGAGGACTTTCCTA+TGG | - | chr1_2:4905631-4905650 | Msa0050880:intron | 40.0% | |
| ATTTGTCAGAGCTCTGTTTC+TGG | + | chr1_2:4905846-4905865 | None:intergenic | 40.0% | |
| ! | GAAACAGAGCTCTGACAAAT+AGG | - | chr1_2:4905846-4905865 | Msa0050880:intron | 40.0% |
| CTAGGTTGCATTAGCACAAA+TGG | - | chr1_2:4905914-4905933 | Msa0050880:intron | 40.0% | |
| ! | GTCCACATTTTTGTTAGACG+AGG | + | chr1_2:4905951-4905970 | None:intergenic | 40.0% |
| AAACTAACCAAGGATACCAC+TGG | + | chr1_2:4906354-4906373 | None:intergenic | 40.0% | |
| !!! | TCCTTGGTTAGTTTTGCAAC+AGG | - | chr1_2:4906360-4906379 | Msa0050880:CDS | 40.0% |
| !! | TAGGTTGGTTATACGAATGC+TGG | - | chr1_2:4906466-4906485 | Msa0050880:intron | 40.0% |
| CACCAATGAAGACAATGTCT+AGG | + | chr1_2:4906630-4906649 | None:intergenic | 40.0% | |
| ! | TTTTATCATCCCGCAACCAA+GGG | + | chr1_2:4906797-4906816 | None:intergenic | 40.0% |
| ! | TTTTTATCATCCCGCAACCA+AGG | + | chr1_2:4906798-4906817 | None:intergenic | 40.0% |
| AAATTCAACCACACAGGACT+CGG | + | chr1_2:4906864-4906883 | None:intergenic | 40.0% | |
| ! | GTCCTGTGTGGTTGAATTTT+AGG | - | chr1_2:4906865-4906884 | Msa0050880:intron | 40.0% |
| TGCCTAAAATTCAACCACAC+AGG | + | chr1_2:4906870-4906889 | None:intergenic | 40.0% | |
| ! | GCTTTTGTCCAGATGAAGAA+TGG | - | chr1_2:4906917-4906936 | Msa0050880:intron | 40.0% |
| TGTCCAGATGAAGAATGGAA+AGG | - | chr1_2:4906922-4906941 | Msa0050880:intron | 40.0% | |
| ACTCCTTTCCATTCTTCATC+TGG | + | chr1_2:4906928-4906947 | None:intergenic | 40.0% | |
| TTTCTCCTAACAGACACTGT+TGG | - | chr1_2:4906947-4906966 | Msa0050880:intron | 40.0% | |
| CTGCAGAGAGCAGAAAAAAA+TGG | + | chr1_2:4907104-4907123 | None:intergenic | 40.0% | |
| !!! | CATTTTTTTCTGCTCTCTGC+AGG | - | chr1_2:4907102-4907121 | Msa0050880:intron | 40.0% |
| TGGTGCATGTGATTGATATC+AGG | - | chr1_2:4907173-4907192 | Msa0050880:intron | 40.0% | |
| ATTTATCTGTTGCTCAGCCA+GGG | + | chr1_2:4907324-4907343 | None:intergenic | 40.0% | |
| TGAGCAACAGATAAATGCTG+TGG | - | chr1_2:4907328-4907347 | Msa0050880:intron | 40.0% | |
| !! | CAATTCCAAAGTTGATGGTC+TGG | - | chr1_2:4907381-4907400 | Msa0050880:intron | 40.0% |
| TTGTTCCAGACCATCAACTT+TGG | + | chr1_2:4907389-4907408 | None:intergenic | 40.0% | |
| !! | AAAGTTGATGGTCTGGAACA+AGG | - | chr1_2:4907388-4907407 | Msa0050880:intron | 40.0% |
| ! | ATGGTCTGGAACAAGGTATT+GGG | - | chr1_2:4907395-4907414 | Msa0050880:intron | 40.0% |
| !! | GGAACAAGGTATTGGGAAAA+TGG | - | chr1_2:4907402-4907421 | Msa0050880:intron | 40.0% |
| CATCCCAAGTAATGTGGTAT+AGG | + | chr1_2:4907616-4907635 | None:intergenic | 40.0% | |
| !! | GCTTCTAGGATAGTTGATTC+AGG | - | chr1_2:4907967-4907986 | Msa0050880:intron | 40.0% |
| ! | CTAGGATAGTTGATTCAGGA+CGG | - | chr1_2:4907971-4907990 | Msa0050880:intron | 40.0% |
| !!! | GACTGCTTTTGGTTCAAAAC+TGG | - | chr1_2:4908146-4908165 | Msa0050880:intron | 40.0% |
| ! | AATCCTTTTCCCACTAAGTG+GGG | + | chr1_2:4908519-4908538 | None:intergenic | 40.0% |
| ! | CAATCCTTTTCCCACTAAGT+GGG | + | chr1_2:4908520-4908539 | None:intergenic | 40.0% |
| CTGTTACAGCTTGAACATTC+TGG | - | chr1_2:4908700-4908719 | Msa0050880:intron | 40.0% | |
| ! | GCTTCTAGTCTGATTTTCTG+GGG | + | chr1_2:4908765-4908784 | None:intergenic | 40.0% |
| ! | CAGCTTCTAGTCTGATTTTC+TGG | + | chr1_2:4908767-4908786 | None:intergenic | 40.0% |
| CAGAAAATCAGACTAGAAGC+TGG | - | chr1_2:4908765-4908784 | Msa0050880:intron | 40.0% | |
| GTATGCATATCTGCCTTAAG+TGG | - | chr1_2:4908804-4908823 | Msa0050880:intron | 40.0% | |
| ATATCTGCCTTAAGTGGCAA+TGG | - | chr1_2:4908810-4908829 | Msa0050880:intron | 40.0% | |
| ! | TTGTATGCCATTGCCACTTA+AGG | + | chr1_2:4908820-4908839 | None:intergenic | 40.0% |
| TTTAACAGGACTCCATGGTA+TGG | - | chr1_2:4908966-4908985 | Msa0050880:intron | 40.0% | |
| TTAACAGGACTCCATGGTAT+GGG | - | chr1_2:4908967-4908986 | Msa0050880:intron | 40.0% | |
| ! | AGAAGGTCCCCATTTTCAAA+TGG | + | chr1_2:4909007-4909026 | None:intergenic | 40.0% |
| !! | AACCATTCCAACTTGGTGTA+TGG | + | chr1_2:4909035-4909054 | None:intergenic | 40.0% |
| CTTGATATATGTCCCTTGCT+CGG | + | chr1_2:4909194-4909213 | None:intergenic | 40.0% | |
| CATACATATCTGTCACTAGG+TGG | - | chr1_2:4909329-4909348 | Msa0050880:CDS | 40.0% | |
| !! | AACACGGTCCCCATTTTTAA+GGG | + | chr1_2:4909502-4909521 | None:intergenic | 40.0% |
| ATCCTTCAACGCTTTCAACA+CGG | + | chr1_2:4909518-4909537 | None:intergenic | 40.0% | |
| TTATCTTCATCGGGAGTTGG+AGG | + | chr1_2:4902526-4902545 | None:intergenic | 45.0% | |
| GCTTTATCTTCATCGGGAGT+TGG | + | chr1_2:4902529-4902548 | None:intergenic | 45.0% | |
| TAGTTTCCCCGCTATAAGGA+AGG | + | chr1_2:4902929-4902948 | None:intergenic | 45.0% | |
| ! | GAAGAGAAAGCGTATCTGGT+TGG | - | chr1_2:4903290-4903309 | Msa0050880:intron | 45.0% |
| !! | CTGGTTGGTGTTGAGAGAAA+AGG | - | chr1_2:4903305-4903324 | Msa0050880:intron | 45.0% |
| ATCAAACTGTGCCCCAGTTA+TGG | - | chr1_2:4904083-4904102 | Msa0050880:intron | 45.0% | |
| TGATGAAACAGAGGAGTCTG+AGG | + | chr1_2:4904139-4904158 | None:intergenic | 45.0% | |
| !! | GTAGGTCAAGTATTGAGGGA+CGG | + | chr1_2:4904232-4904251 | None:intergenic | 45.0% |
| CCCTCAATACTTGACCTGTT+TGG | + | chr1_2:4904488-4904507 | None:intergenic | 45.0% | |
| !! | ACAGGTCAAGTATTGAGGGA+CGG | - | chr1_2:4904489-4904508 | Msa0050880:intron | 45.0% |
| !! | ACGGAGGGAGTATTGTTTAC+AGG | - | chr1_2:4904508-4904527 | Msa0050880:intron | 45.0% |
| !! | AGGGAGTATTGTTTACAGGC+AGG | - | chr1_2:4904512-4904531 | Msa0050880:intron | 45.0% |
| CCAAACCCTAGGACGTATAT+CGG | - | chr1_2:4904685-4904704 | Msa0050880:intron | 45.0% | |
| ATGAGCTATCAGCTGGGTAA+GGG | - | chr1_2:4904776-4904795 | Msa0050880:CDS | 45.0% | |
| CAAAGTAGAGCAGAACAGTC+TGG | + | chr1_2:4905231-4905250 | None:intergenic | 45.0% | |
| CTACAGTGATGACACCCAAA+AGG | - | chr1_2:4905266-4905285 | Msa0050880:CDS | 45.0% | |
| !! | TACTGATCCCTGCTGATTCT+AGG | - | chr1_2:4905352-4905371 | Msa0050880:intron | 45.0% |
| ! | CGCAACCTGGAAAAGGTTTT+TGG | - | chr1_2:4905381-4905400 | Msa0050880:intron | 45.0% |
| ! | CTCCACCAAAAACCTTTTCC+AGG | + | chr1_2:4905389-4905408 | None:intergenic | 45.0% |
| ACTCATCTTGAGCGTCAATC+AGG | - | chr1_2:4905969-4905988 | Msa0050880:intron | 45.0% | |
| ! | ATGCATGGGCTTTGACAGAT+CGG | - | chr1_2:4906252-4906271 | Msa0050880:intron | 45.0% |
| GCCTGTTGCAAAACTAACCA+AGG | + | chr1_2:4906364-4906383 | None:intergenic | 45.0% | |
| ! | TCCAACTACAAGGAGAGTAC+AGG | - | chr1_2:4906561-4906580 | Msa0050880:intron | 45.0% |
| ACCTGTACTCTCCTTGTAGT+TGG | + | chr1_2:4906565-4906584 | None:intergenic | 45.0% | |
| TTTACAGTGTCCCTTGGTTG+CGG | - | chr1_2:4906784-4906803 | Msa0050880:intron | 45.0% | |
| TTTATCTGTTGCTCAGCCAG+GGG | + | chr1_2:4907323-4907342 | None:intergenic | 45.0% | |
| CATTTATCTGTTGCTCAGCC+AGG | + | chr1_2:4907325-4907344 | None:intergenic | 45.0% | |
| ! | GATGGTCTGGAACAAGGTAT+TGG | - | chr1_2:4907394-4907413 | Msa0050880:intron | 45.0% |
| TCTTGTGAGTTGTGACCAAG+CGG | - | chr1_2:4907797-4907816 | Msa0050880:intron | 45.0% | |
| TGATCAAACTCTTGACCGCT+TGG | + | chr1_2:4907815-4907834 | None:intergenic | 45.0% | |
| AGCGGTCAAGAGTTTGATCA+TGG | - | chr1_2:4907815-4907834 | Msa0050880:intron | 45.0% | |
| ! | TAGCAGTTTAGAATGAGGGG+TGG | + | chr1_2:4907841-4907860 | None:intergenic | 45.0% |
| CCAAAAGCAGTCCATAATCC+AGG | + | chr1_2:4908138-4908157 | None:intergenic | 45.0% | |
| !! | CCTGGATTATGGACTGCTTT+TGG | - | chr1_2:4908135-4908154 | Msa0050880:intron | 45.0% |
| ATGATGTTGCGTTGGATGTG+TGG | - | chr1_2:4908238-4908257 | Msa0050880:intron | 45.0% | |
| GGATGTGTGGTAAGACTAGA+CGG | - | chr1_2:4908251-4908270 | Msa0050880:intron | 45.0% | |
| GATGTGTGGTAAGACTAGAC+GGG | - | chr1_2:4908252-4908271 | Msa0050880:intron | 45.0% | |
| GGTAAGGAGAGTAGATCAGA+TGG | - | chr1_2:4908343-4908362 | Msa0050880:CDS | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | - | chr1_2:4908346-4908365 | Msa0050880:CDS | 45.0% | |
| ! | CCAATCCTTTTCCCACTAAG+TGG | + | chr1_2:4908521-4908540 | None:intergenic | 45.0% |
| CCACTTAGTGGGAAAAGGAT+TGG | - | chr1_2:4908518-4908537 | Msa0050880:intron | 45.0% | |
| CTTCAAGTGCACAGTAAAGC+CGG | + | chr1_2:4908675-4908694 | None:intergenic | 45.0% | |
| TAGCCCTATCAATCTGCCAT+AGG | + | chr1_2:4908737-4908756 | None:intergenic | 45.0% | |
| ! | CACCATACACCAAGTTGGAA+TGG | - | chr1_2:4909030-4909049 | Msa0050880:intron | 45.0% |
| GCTACCTGTTGATCATAGTC+TGG | - | chr1_2:4909086-4909105 | Msa0050880:intron | 45.0% | |
| TCTGCCAGACTATGATCAAC+AGG | + | chr1_2:4909093-4909112 | None:intergenic | 45.0% | |
| CGAGCAAGGGACATATATCA+AGG | - | chr1_2:4909192-4909211 | Msa0050880:CDS | 45.0% | |
| GGTACACACAGTTGTCTCAT+AGG | + | chr1_2:4909253-4909272 | None:intergenic | 45.0% | |
| !! | CAACACGGTCCCCATTTTTA+AGG | + | chr1_2:4909503-4909522 | None:intergenic | 45.0% |
| AAATGCGCATGCGTTAACGG+TGG | - | chr1_2:4902262-4902281 | Msa0050880:three_prime_UTR | 50.0% | |
| TGGAAGTAAAACGGCGTCGT+TGG | + | chr1_2:4902479-4902498 | None:intergenic | 50.0% | |
| AACCGCTTCAAGCTCCGTAA+CGG | - | chr1_2:4902613-4902632 | Msa0050880:intron | 50.0% | |
| TTCCGTTACGGAGCTTGAAG+CGG | + | chr1_2:4902618-4902637 | None:intergenic | 50.0% | |
| ! | CAGCTAGTTTCCCCGCTATA+AGG | + | chr1_2:4902933-4902952 | None:intergenic | 50.0% |
| GAGCAGTTAGCTGATACTGC+TGG | - | chr1_2:4903374-4903393 | Msa0050880:intron | 50.0% | |
| CATGTTCACGCTCGTAAACC+TGG | - | chr1_2:4903985-4904004 | Msa0050880:intron | 50.0% | |
| !! | GTCAAGTATTGAGGGACGGA+GGG | + | chr1_2:4904493-4904512 | None:intergenic | 50.0% |
| !! | GTCAAGTATTGAGGGACGGA+GGG | - | chr1_2:4904493-4904512 | Msa0050880:intron | 50.0% |
| CCGATATACGTCCTAGGGTT+TGG | + | chr1_2:4904688-4904707 | None:intergenic | 50.0% | |
| CAGAGCCGATATACGTCCTA+GGG | + | chr1_2:4904693-4904712 | None:intergenic | 50.0% | |
| GATGAGCTATCAGCTGGGTA+AGG | - | chr1_2:4904775-4904794 | Msa0050880:CDS | 50.0% | |
| CTATAAGAGCCAGGTTGCTC+TGG | - | chr1_2:4905065-4905084 | Msa0050880:intron | 50.0% | |
| ACAAATCCTCCAGAGCAACC+TGG | + | chr1_2:4905077-4905096 | None:intergenic | 50.0% | |
| GCAGTTGCCTAGAATCAGCA+GGG | + | chr1_2:4905362-4905381 | None:intergenic | 50.0% | |
| CATCTTGAGCGTCAATCAGG+AGG | - | chr1_2:4905972-4905991 | Msa0050880:intron | 50.0% | |
| TCAATCAGGAGGACAGGTGA+AGG | - | chr1_2:4905983-4906002 | Msa0050880:intron | 50.0% | |
| CAATCAGGAGGACAGGTGAA+GGG | - | chr1_2:4905984-4906003 | Msa0050880:intron | 50.0% | |
| ACCGAAAGCAGTACCGTAAC+AGG | - | chr1_2:4906310-4906329 | Msa0050880:CDS | 50.0% | |
| GCCTGTTACGGTACTGCTTT+CGG | + | chr1_2:4906314-4906333 | None:intergenic | 50.0% | |
| GTACTGAGAGACGCCTGTTA+CGG | + | chr1_2:4906326-4906345 | None:intergenic | 50.0% | |
| CCAAGGGACACTGTAAACAG+AGG | + | chr1_2:4906781-4906800 | None:intergenic | 50.0% | |
| CCTCTGTTTACAGTGTCCCT+TGG | - | chr1_2:4906778-4906797 | Msa0050880:intron | 50.0% | |
| TTACAGTGTCCCTTGGTTGC+GGG | - | chr1_2:4906785-4906804 | Msa0050880:intron | 50.0% | |
| CTCTGATATCTCCTCCAGTG+TGG | + | chr1_2:4907143-4907162 | None:intergenic | 50.0% | |
| TTATCTGTTGCTCAGCCAGG+GGG | + | chr1_2:4907322-4907341 | None:intergenic | 50.0% | |
| TGATTCAGGACGGCAACAAG+AGG | - | chr1_2:4907981-4908000 | Msa0050880:intron | 50.0% | |
| GATTCAGGACGGCAACAAGA+GGG | - | chr1_2:4907982-4908001 | Msa0050880:intron | 50.0% | |
| ! | CGGAGATGATGATGTTGCGT+TGG | - | chr1_2:4908230-4908249 | Msa0050880:intron | 50.0% |
| GTGGTAAGACTAGACGGGAT+AGG | - | chr1_2:4908257-4908276 | Msa0050880:intron | 50.0% | |
| ! | CTTTTCCCACTAAGTGGGGT+CGG | + | chr1_2:4908515-4908534 | None:intergenic | 50.0% |
| GTGCACAGTAAAGCCGGTAA+AGG | + | chr1_2:4908669-4908688 | None:intergenic | 50.0% | |
| CAAAGCTTCCACCCATACCA+TGG | + | chr1_2:4908981-4909000 | None:intergenic | 50.0% | |
| ! | CTTGGTGTATGGTGCTGAGA+AGG | + | chr1_2:4909024-4909043 | None:intergenic | 50.0% |
| CTCAGCACCATACACCAAGT+TGG | - | chr1_2:4909025-4909044 | Msa0050880:intron | 50.0% | |
| AAGCAACCTCGCATAACGCA+GGG | + | chr1_2:4909227-4909246 | None:intergenic | 50.0% | |
| TAAGCAACCTCGCATAACGC+AGG | + | chr1_2:4909228-4909247 | None:intergenic | 50.0% | |
| !! | GACCGTGTTGAAAGCGTTGA+AGG | - | chr1_2:4909513-4909532 | Msa0050880:five_prime_UTR | 50.0% |
| ! | CAAGCTCCGTAACGGAAGAG+AGG | - | chr1_2:4902621-4902640 | Msa0050880:intron | 55.0% |
| !! | GGTCAAGTATTGAGGGACGG+AGG | + | chr1_2:4904492-4904511 | None:intergenic | 55.0% |
| !! | GGTCAAGTATTGAGGGACGG+AGG | - | chr1_2:4904492-4904511 | Msa0050880:intron | 55.0% |
| ! | GGCTTGCTTCTCCAAACCCT+AGG | - | chr1_2:4904674-4904693 | Msa0050880:intron | 55.0% |
| CCAGAGCCGATATACGTCCT+AGG | + | chr1_2:4904694-4904713 | None:intergenic | 55.0% | |
| !! | CCTAGGACGTATATCGGCTC+TGG | - | chr1_2:4904691-4904710 | Msa0050880:intron | 55.0% |
| TAAGAGCCAGGTTGCTCTGG+AGG | - | chr1_2:4905068-4905087 | Msa0050880:intron | 55.0% | |
| CGCAGTTGCCTAGAATCAGC+AGG | + | chr1_2:4905363-4905382 | None:intergenic | 55.0% | |
| TTCTAGGCAACTGCGCAACC+TGG | - | chr1_2:4905368-4905387 | Msa0050880:intron | 55.0% | |
| GCAACTGCGCAACCTGGAAA+AGG | - | chr1_2:4905374-4905393 | Msa0050880:intron | 55.0% | |
| TGAGCGTCAATCAGGAGGAC+AGG | - | chr1_2:4905977-4905996 | Msa0050880:intron | 55.0% | |
| AGGAGGACAGGTGAAGGGAA+TGG | - | chr1_2:4905989-4906008 | Msa0050880:intron | 55.0% | |
| GGAGGACAGGTGAAGGGAAT+GGG | - | chr1_2:4905990-4906009 | Msa0050880:intron | 55.0% | |
| TCTCTCAGTACCTGTGCCAG+TGG | - | chr1_2:4906335-4906354 | Msa0050880:CDS | 55.0% | |
| ACCTGTGCCAGTGGTATCCT+TGG | - | chr1_2:4906344-4906363 | Msa0050880:CDS | 55.0% | |
| ACCAAGGATACCACTGGCAC+AGG | + | chr1_2:4906348-4906367 | None:intergenic | 55.0% | |
| TGGAGCAGATGTTCTTGCCG+AGG | - | chr1_2:4906516-4906535 | Msa0050880:intron | 55.0% | |
| GCAAGAAACCGAGTCCTGTG+TGG | - | chr1_2:4906853-4906872 | Msa0050880:intron | 55.0% | |
| CATGAATTGCAGTCACCCCC+TGG | - | chr1_2:4907304-4907323 | Msa0050880:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr1_2:4908507-4908526 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr1_2:4908506-4908525 | Msa0050880:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr1_2:4908507-4908526 | Msa0050880:intron | 55.0% | |
| CGACCCCACTTAGTGGGAAA+AGG | - | chr1_2:4908513-4908532 | Msa0050880:intron | 55.0% | |
| ACAGGACTCCATGGTATGGG+TGG | - | chr1_2:4908970-4908989 | Msa0050880:intron | 55.0% | |
| AGCAACCTCGCATAACGCAG+GGG | + | chr1_2:4909226-4909245 | None:intergenic | 55.0% | |
| TGCGCATGCGTTAACGGTGG+TGG | - | chr1_2:4902265-4902284 | Msa0050880:three_prime_UTR | 60.0% | |
| TGCTGCCTTCAGAGCCACAC+TGG | - | chr1_2:4907126-4907145 | Msa0050880:intron | 60.0% | |
| TGCCTTCAGAGCCACACTGG+AGG | - | chr1_2:4907129-4907148 | Msa0050880:intron | 60.0% | |
| !! | CTCCTCCAGTGTGGCTCTGA+AGG | + | chr1_2:4907134-4907153 | None:intergenic | 60.0% |
| ATGTGCCCCTGCGTTATGCG+AGG | - | chr1_2:4909218-4909237 | Msa0050880:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 4902201 | 4909562 | 4902201 | ID=Msa0050880;Name=Msa0050880 |
| chr1_2 | mRNA | 4902201 | 4909562 | 4902201 | ID=Msa0050880-mRNA-1;Parent=Msa0050880;Name=Msa0050880-mRNA-1;_AED=0.07;_eAED=0.07;_QI=55|1|1|1|1|1|13|280|553 |
| chr1_2 | exon | 4902201 | 4902579 | 4902201 | ID=Msa0050880-mRNA-1:exon:1372;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4902700 | 4902789 | 4902700 | ID=Msa0050880-mRNA-1:exon:1371;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4902891 | 4903019 | 4902891 | ID=Msa0050880-mRNA-1:exon:1370;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4904354 | 4904447 | 4904354 | ID=Msa0050880-mRNA-1:exon:1369;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4904569 | 4904639 | 4904569 | ID=Msa0050880-mRNA-1:exon:1368;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4904766 | 4904834 | 4904766 | ID=Msa0050880-mRNA-1:exon:1367;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4905181 | 4905294 | 4905181 | ID=Msa0050880-mRNA-1:exon:1366;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4905398 | 4905493 | 4905398 | ID=Msa0050880-mRNA-1:exon:1365;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4905708 | 4905845 | 4905708 | ID=Msa0050880-mRNA-1:exon:1364;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4906275 | 4906389 | 4906275 | ID=Msa0050880-mRNA-1:exon:1363;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4906972 | 4907088 | 4906972 | ID=Msa0050880-mRNA-1:exon:1362;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4908337 | 4908479 | 4908337 | ID=Msa0050880-mRNA-1:exon:1361;Parent=Msa0050880-mRNA-1 |
| chr1_2 | exon | 4909121 | 4909562 | 4909121 | ID=Msa0050880-mRNA-1:exon:1360;Parent=Msa0050880-mRNA-1 |
| chr1_2 | five_prime_UTR | 4909508 | 4909562 | 4909508 | ID=Msa0050880-mRNA-1:five_prime_utr;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4909121 | 4909507 | 4909121 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4908337 | 4908479 | 4908337 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4906972 | 4907088 | 4906972 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4906275 | 4906389 | 4906275 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4905708 | 4905845 | 4905708 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4905398 | 4905493 | 4905398 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4905181 | 4905294 | 4905181 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4904766 | 4904834 | 4904766 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4904569 | 4904639 | 4904569 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4904354 | 4904447 | 4904354 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4902891 | 4903019 | 4902891 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4902700 | 4902789 | 4902700 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | CDS | 4902481 | 4902579 | 4902481 | ID=Msa0050880-mRNA-1:cds;Parent=Msa0050880-mRNA-1 |
| chr1_2 | three_prime_UTR | 4902201 | 4902480 | 4902201 | ID=Msa0050880-mRNA-1:three_prime_utr;Parent=Msa0050880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
