Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293550 | XP_013464522.1 | 81.651 | 327 | 7 | 4 | 1 | 278 | 1 | 323 | 2.57e-169 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293550 | sp|Q9SYM0|VTE6_ARATH | 57.394 | 284 | 67 | 5 | 46 | 275 | 47 | 330 | 3.89e-98 | 294 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293550 | A0A072V9R4 | 81.651 | 327 | 7 | 4 | 1 | 278 | 1 | 323 | 1.23e-169 | 481 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0293550 | Msa0332400 | 0.907666 | 3.960971e-81 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293550 | MtrunA17_Chr2g0314681 | 81.651 | 327 | 7 | 4 | 1 | 278 | 1 | 323 | 2.36e-173 | 481 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293550 | AT1G78620.1 | 57.394 | 284 | 67 | 5 | 46 | 275 | 47 | 330 | 3.96e-99 | 294 |
| Msa0293550 | AT1G78620.2 | 55.631 | 293 | 67 | 6 | 46 | 275 | 47 | 339 | 5.43e-96 | 286 |
Find 67 sgRNAs with CRISPR-Local
Find 546 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAAATTGATTGTTCTTAA+TGG | 0.178049 | 2_3:-44470948 | Msa0293550:three_prime_UTR |
| GCGAAGAATGTGAGAGTTTA+AGG | 0.207032 | 2_3:+44478602 | None:intergenic |
| AGTCAAAATGGCACAGAAAA+TGG | 0.253977 | 2_3:-44477625 | Msa0293550:CDS |
| AGGGGTCCAGGGAGTGTTAT+TGG | 0.294469 | 2_3:-44477570 | Msa0293550:CDS |
| TGAGCTTACAATGATGAAAT+AGG | 0.314279 | 2_3:+44478323 | None:intergenic |
| AAATTTAGGGATGCAAGTTT+TGG | 0.335808 | 2_3:+44471217 | None:intergenic |
| AATCTTGGTGAAAGCATAAT+TGG | 0.340647 | 2_3:-44471868 | Msa0293550:CDS |
| ACTCTTACTTGGCGTGCTTT+TGG | 0.341574 | 2_3:-44478372 | Msa0293550:CDS |
| TTTCACCAAGATTGGCAAAC+TGG | 0.344722 | 2_3:+44471878 | None:intergenic |
| AATTATGCTTTCACCAAGAT+TGG | 0.346679 | 2_3:+44471870 | None:intergenic |
| GCTGCCCAGTTTGCCAATCT+TGG | 0.362062 | 2_3:-44471883 | Msa0293550:CDS |
| GTTGGTGTAAATGTGAGTTT+TGG | 0.381754 | 2_3:+44478627 | None:intergenic |
| AGGGTTTATGTTTGTGATGT+TGG | 0.393863 | 2_3:+44478661 | None:intergenic |
| AGCTGCAACAAAAGTCAAAA+TGG | 0.399751 | 2_3:-44477637 | Msa0293550:CDS |
| AGAAAAGGAAGAAGGGGTCC+AGG | 0.424572 | 2_3:-44477582 | Msa0293550:CDS |
| CAACATCATCAACATATCAA+TGG | 0.443415 | 2_3:-44471274 | Msa0293550:CDS |
| AGTTTGTGTTACTGTAATCA+AGG | 0.453998 | 2_3:-44470995 | Msa0293550:three_prime_UTR |
| ATGTGAGAGTTTAAGGTTGT+TGG | 0.459491 | 2_3:+44478609 | None:intergenic |
| TTTCTCAGCTTTGGAGACTT+GGG | 0.460386 | 2_3:-44477485 | Msa0293550:intron |
| GAAGGGGCGGTTAGTGTTGA+AGG | 0.469316 | 2_3:-44477103 | Msa0293550:CDS |
| TTCACCAAGATTGGCAAACT+GGG | 0.473229 | 2_3:+44471879 | None:intergenic |
| AACATCATCAACATATCAAT+GGG | 0.473319 | 2_3:-44471273 | Msa0293550:CDS |
| CTGAGAAAAGAAAAGGAAGA+AGG | 0.478719 | 2_3:-44477590 | Msa0293550:CDS |
| AGTGTTGAAGGAACCTTGGC+TGG | 0.481616 | 2_3:-44477091 | Msa0293550:CDS |
| CTACCTTGAATGACGTAACT+AGG | 0.481900 | 2_3:+44477140 | None:intergenic |
| GCCACGTGGCAGGTGATGAT+TGG | 0.484057 | 2_3:+44478496 | None:intergenic |
| GTCTACATTTATACAAGAAA+AGG | 0.486174 | 2_3:+44471029 | None:intergenic |
| ACCGCCCCTTCTGTACCTCT+TGG | 0.489864 | 2_3:+44477115 | None:intergenic |
| ACAAACGCAACCGGCAGCAC+TGG | 0.490906 | 2_3:+44477545 | None:intergenic |
| AAATTGATTGTTCTTAATGG+TGG | 0.494574 | 2_3:-44470945 | Msa0293550:three_prime_UTR |
| GAGGAAAGCACAAACGCAAC+CGG | 0.496460 | 2_3:+44477536 | None:intergenic |
| AAAGAAGATTGCCACGTGGC+AGG | 0.496879 | 2_3:+44478486 | None:intergenic |
| AGTAAGACACTTCAACATCT+AGG | 0.497206 | 2_3:+44471119 | None:intergenic |
| AGATGTTGTTGGAGGAGCTA+TGG | 0.519266 | 2_3:-44478526 | Msa0293550:CDS |
| GATTGGCAAACTGGGCAGCT+AGG | 0.519301 | 2_3:+44471887 | None:intergenic |
| GTCTCTTGTGTTGAAAGCAA+TGG | 0.522323 | 2_3:-44471079 | Msa0293550:three_prime_UTR |
| GTAGTTCCAAGAGGTACAGA+AGG | 0.531342 | 2_3:-44477121 | Msa0293550:CDS |
| TCGAGTGTTCAAGATGTTGT+TGG | 0.532110 | 2_3:-44478537 | Msa0293550:CDS |
| GTACCTAGTTACGTCATTCA+AGG | 0.536903 | 2_3:-44477143 | Msa0293550:CDS |
| TGGTGCTTCATTTCAAGAGA+AGG | 0.538249 | 2_3:-44471848 | Msa0293550:CDS |
| CTGGATCCAATAACACTCCC+TGG | 0.539129 | 2_3:+44477564 | None:intergenic |
| ATTGCATCATGTTGTTGTTG+AGG | 0.541558 | 2_3:+44478571 | None:intergenic |
| TATGTTTGTGATGTTGGAAG+AGG | 0.543364 | 2_3:+44478667 | None:intergenic |
| GGGGTTGCTGAGAAAAGAAA+AGG | 0.555747 | 2_3:-44477597 | Msa0293550:CDS |
| GAAAAGGAAGAAGGGGTCCA+GGG | 0.558281 | 2_3:-44477581 | Msa0293550:CDS |
| GTTATTGGATCCAGTGCTGC+CGG | 0.567050 | 2_3:-44477555 | Msa0293550:CDS |
| AGTGTTCAAGATGTTGTTGG+AGG | 0.567276 | 2_3:-44478534 | Msa0293550:CDS |
| AAGAGAAGGAAGGATTTCGA+TGG | 0.569598 | 2_3:-44471834 | Msa0293550:CDS |
| TGAGAAAAGAAAAGGAAGAA+GGG | 0.576058 | 2_3:-44477589 | Msa0293550:CDS |
| GGTTAGTGTTGAAGGAACCT+TGG | 0.579465 | 2_3:-44477095 | Msa0293550:CDS |
| AGATGCTAAAATTCCAGCCA+AGG | 0.586125 | 2_3:+44477078 | None:intergenic |
| GCTTCATTTCAAGAGAAGGA+AGG | 0.588184 | 2_3:-44471844 | Msa0293550:CDS |
| TGTGATGTTGGAAGAGGCGA+GGG | 0.590477 | 2_3:+44478673 | None:intergenic |
| GGCACAGAAAATGGAACAAG+GGG | 0.597382 | 2_3:-44477616 | Msa0293550:CDS |
| TAGTTCCAAGAGGTACAGAA+GGG | 0.598143 | 2_3:-44477120 | Msa0293550:CDS |
| AGAGAAGGAAGGATTTCGAT+GGG | 0.605161 | 2_3:-44471833 | Msa0293550:intron |
| ATGGCACAGAAAATGGAACA+AGG | 0.629097 | 2_3:-44477618 | Msa0293550:CDS |
| TTGTGATGTTGGAAGAGGCG+AGG | 0.631395 | 2_3:+44478672 | None:intergenic |
| GAGAAAAGAAAAGGAAGAAG+GGG | 0.634746 | 2_3:-44477588 | Msa0293550:CDS |
| TCCAAGAGGTACAGAAGGGG+CGG | 0.638566 | 2_3:-44477116 | Msa0293550:CDS |
| GCCCAGAAGAAAACTGACAA+AGG | 0.643507 | 2_3:+44477045 | None:intergenic |
| TGGCACAGAAAATGGAACAA+GGG | 0.644509 | 2_3:-44477617 | Msa0293550:CDS |
| GCTTGCAAGTTGCAATGCAG+AGG | 0.647091 | 2_3:-44470882 | None:intergenic |
| AGTTCCAAGAGGTACAGAAG+GGG | 0.678598 | 2_3:-44477119 | Msa0293550:CDS |
| TCCAATCATCACCTGCCACG+TGG | 0.687047 | 2_3:-44478497 | Msa0293550:CDS |
| TCATTCAAGGTAGTTCCAAG+AGG | 0.702321 | 2_3:-44477130 | Msa0293550:CDS |
| TAACAAAGAAGATTGCCACG+TGG | 0.833811 | 2_3:+44478482 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTAATTATTTTTAAAA+TGG | - | chr2_3:44473483-44473502 | Msa0293550:intron | 0.0% |
| !!! | AAATTAATTATTTTTAAAAT+GGG | - | chr2_3:44473484-44473503 | Msa0293550:intron | 0.0% |
| !!! | TTAATATATAAATTTTAAAA+CGG | + | chr2_3:44474291-44474310 | None:intergenic | 0.0% |
| !!! | TGTTAATTAATATGATATTT+TGG | - | chr2_3:44473313-44473332 | Msa0293550:intron | 10.0% |
| !! | TTCCTATAAAAATAAAATAA+AGG | - | chr2_3:44474547-44474566 | Msa0293550:intron | 10.0% |
| !! | TAAAATGTAAATTAAATTCA+GGG | - | chr2_3:44474662-44474681 | Msa0293550:intron | 10.0% |
| !!! | AATTTTGAATTTGAAATTTA+AGG | - | chr2_3:44474701-44474720 | Msa0293550:intron | 10.0% |
| !! | TTGAAAAAAATTCAATATTT+AGG | - | chr2_3:44474733-44474752 | Msa0293550:intron | 10.0% |
| !!! | CATTTTTTTTAATAGAAAAA+TGG | - | chr2_3:44474892-44474911 | Msa0293550:intron | 10.0% |
| !! | AAAAAATGTATTAAAAAAGT+AGG | - | chr2_3:44476959-44476978 | Msa0293550:intron | 10.0% |
| !! | AAAAATGTATTAAAAAAGTA+GGG | - | chr2_3:44476960-44476979 | Msa0293550:intron | 10.0% |
| !!! | TTGAAAAATTTGATTTTTGT+TGG | - | chr2_3:44471361-44471380 | Msa0293550:intron | 15.0% |
| !!! | TTTCTTATTTTATGAAATTC+TGG | - | chr2_3:44471741-44471760 | Msa0293550:intron | 15.0% |
| !!! | ATATATTTTTAACAGAAACA+CGG | + | chr2_3:44472955-44472974 | None:intergenic | 15.0% |
| !! | AAATCTTAAATATAAACCTT+AGG | - | chr2_3:44473079-44473098 | Msa0293550:intron | 15.0% |
| !! | AATCTTAAATATAAACCTTA+GGG | - | chr2_3:44473080-44473099 | Msa0293550:intron | 15.0% |
| !!! | TAAAATTTTATTCTATTTGC+AGG | + | chr2_3:44474170-44474189 | None:intergenic | 15.0% |
| !!! | AGCCTTTATTTTATTTTTAT+AGG | + | chr2_3:44474552-44474571 | None:intergenic | 15.0% |
| !! | AATTGAACAAAAAATTTGTA+AGG | - | chr2_3:44474574-44474593 | Msa0293550:intron | 15.0% |
| !! | GTAAAATGTAAATTAAATTC+AGG | - | chr2_3:44474661-44474680 | Msa0293550:intron | 15.0% |
| !! | AAAAAAATTCAATATTTAGG+AGG | - | chr2_3:44474736-44474755 | Msa0293550:intron | 15.0% |
| !!! | AGATTTTGAATTTTGATTTA+AGG | - | chr2_3:44474769-44474788 | Msa0293550:intron | 15.0% |
| !! | TTGCCTTAAAAATATATTAT+TGG | - | chr2_3:44475031-44475050 | Msa0293550:intron | 15.0% |
| !! | TGCCTTAAAAATATATTATT+GGG | - | chr2_3:44475032-44475051 | Msa0293550:intron | 15.0% |
| !!! | TCAAAACAAATTAAATGTTT+TGG | - | chr2_3:44475084-44475103 | Msa0293550:intron | 15.0% |
| !!! | CAAAACAAATTAAATGTTTT+GGG | - | chr2_3:44475085-44475104 | Msa0293550:intron | 15.0% |
| !!! | AAAACAAATTAAATGTTTTG+GGG | - | chr2_3:44475086-44475105 | Msa0293550:intron | 15.0% |
| !! | ATATTATTCTTTATATGAAC+TGG | + | chr2_3:44476858-44476877 | None:intergenic | 15.0% |
| !! | CAAAACTGTAAATATTTATA+GGG | + | chr2_3:44477003-44477022 | None:intergenic | 15.0% |
| !! | ACAAAACTGTAAATATTTAT+AGG | + | chr2_3:44477004-44477023 | None:intergenic | 15.0% |
| !!! | AAAGTATGATTTTATTTTGT+AGG | - | chr2_3:44477190-44477209 | Msa0293550:intron | 15.0% |
| !!! | AAGTATGATTTTATTTTGTA+GGG | - | chr2_3:44477191-44477210 | Msa0293550:intron | 15.0% |
| !!! | GTTTTTTTCTTTACTTTTTT+CGG | + | chr2_3:44477265-44477284 | None:intergenic | 15.0% |
| !!! | TTCAATTTTATTTGAATTGT+GGG | + | chr2_3:44477303-44477322 | None:intergenic | 15.0% |
| !!! | CAGAAAATAATTAAGTTTTT+CGG | + | chr2_3:44477790-44477809 | None:intergenic | 15.0% |
| !! | TTGCAAAGATTGATTATTAA+TGG | - | chr2_3:44471609-44471628 | Msa0293550:intron | 20.0% |
| !!! | ATTTTGAATGTTTTGTTTGT+GGG | - | chr2_3:44471683-44471702 | Msa0293550:intron | 20.0% |
| !!! | AGTTTATCAATTTTCAGATA+AGG | + | chr2_3:44471721-44471740 | None:intergenic | 20.0% |
| !!! | ATTTTATGAAATTCTGGAAA+TGG | - | chr2_3:44471747-44471766 | Msa0293550:intron | 20.0% |
| !!! | TTTTATGAAATTCTGGAAAT+GGG | - | chr2_3:44471748-44471767 | Msa0293550:intron | 20.0% |
| !!! | ATGCAAATTTTCATTGTTTT+TGG | - | chr2_3:44471870-44471889 | Msa0293550:CDS | 20.0% |
| !!! | TTGATATAAAAGTATAGTGT+CGG | - | chr2_3:44472346-44472365 | Msa0293550:intron | 20.0% |
| !!! | TGAATCTGAAATATGTTTAT+GGG | - | chr2_3:44472587-44472606 | Msa0293550:intron | 20.0% |
| !!! | GTGTTTCTGTTAAAAATATA+TGG | - | chr2_3:44472954-44472973 | Msa0293550:intron | 20.0% |
| !!! | GTATTTTATCTTTACTTTTG+AGG | - | chr2_3:44473338-44473357 | Msa0293550:intron | 20.0% |
| !! | AAAAATTCCTTGATGTTATT+GGG | + | chr2_3:44473443-44473462 | None:intergenic | 20.0% |
| !! | AAAAAATTCCTTGATGTTAT+TGG | + | chr2_3:44473444-44473463 | None:intergenic | 20.0% |
| !! | AGTTTATCTAGATACATAAA+TGG | - | chr2_3:44473689-44473708 | Msa0293550:intron | 20.0% |
| !!! | TTAAAGTTGAGATTTTTCAA+AGG | - | chr2_3:44473884-44473903 | Msa0293550:intron | 20.0% |
| !!! | TAAAGTTGAGATTTTTCAAA+GGG | - | chr2_3:44473885-44473904 | Msa0293550:intron | 20.0% |
| !! | AATATTAAATTGGCTATAAC+CGG | - | chr2_3:44474211-44474230 | Msa0293550:intron | 20.0% |
| !!! | AATTTGAAATTTAAGGAAGA+AGG | - | chr2_3:44474708-44474727 | Msa0293550:intron | 20.0% |
| !! | TTAATAGAAAAATGGGAAAA+AGG | - | chr2_3:44474900-44474919 | Msa0293550:intron | 20.0% |
| !!! | TTATTTTTTTTGTCCCATTT+AGG | + | chr2_3:44474958-44474977 | None:intergenic | 20.0% |
| !! | GGGACAAAAAAAATAAATAA+AGG | - | chr2_3:44474962-44474981 | Msa0293550:intron | 20.0% |
| !! | GTTACAACTAAATAAGATAA+AGG | - | chr2_3:44474993-44475012 | Msa0293550:intron | 20.0% |
| !! | GCCTTAAAAATATATTATTG+GGG | - | chr2_3:44475033-44475052 | Msa0293550:intron | 20.0% |
| !!! | ACCCCAATAATATATTTTTA+AGG | + | chr2_3:44475037-44475056 | None:intergenic | 20.0% |
| !! | ATTAGAAGATAAATCCAAAT+AGG | + | chr2_3:44475689-44475708 | None:intergenic | 20.0% |
| !! | TTATCTTCTAATGAAATCAT+TGG | - | chr2_3:44475697-44475716 | Msa0293550:intron | 20.0% |
| !! | TTAAACTTCACTTTATACTT+CGG | - | chr2_3:44476200-44476219 | Msa0293550:intron | 20.0% |
| !! | TATAGATATTCCTATGAAAT+TGG | - | chr2_3:44476558-44476577 | Msa0293550:intron | 20.0% |
| !!! | ACTGTTATTTTTAGTTTGTA+GGG | - | chr2_3:44476604-44476623 | Msa0293550:intron | 20.0% |
| !!! | AAATGCGATTTTATTTTGTA+GGG | + | chr2_3:44477034-44477053 | None:intergenic | 20.0% |
| !!! | AAAATGCGATTTTATTTTGT+AGG | + | chr2_3:44477035-44477054 | None:intergenic | 20.0% |
| !!! | GCTGATGAAATTTTTTTATA+GGG | + | chr2_3:44477094-44477113 | None:intergenic | 20.0% |
| !!! | TGCTGATGAAATTTTTTTAT+AGG | + | chr2_3:44477095-44477114 | None:intergenic | 20.0% |
| !!! | AAAATTTCCATCAAGATTTT+TGG | - | chr2_3:44477130-44477149 | Msa0293550:CDS | 20.0% |
| !!! | CATTTTTCTTAAGCATTTTA+AGG | + | chr2_3:44477157-44477176 | None:intergenic | 20.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | - | chr2_3:44477221-44477240 | Msa0293550:intron | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | - | chr2_3:44477222-44477241 | Msa0293550:intron | 20.0% |
| !!! | GTTCAATTTTATTTGAATTG+TGG | + | chr2_3:44477304-44477323 | None:intergenic | 20.0% |
| !!! | TGGATAGTGTTTTATAATTT+CGG | - | chr2_3:44477459-44477478 | Msa0293550:intron | 20.0% |
| !!! | TGTATAGTTTTTGCTTTTTA+TGG | - | chr2_3:44477582-44477601 | Msa0293550:CDS | 20.0% |
| !! | ATAATTAAGAAGTAAATCAC+TGG | + | chr2_3:44477640-44477659 | None:intergenic | 20.0% |
| !!! | TTATTTGTTGTTAAACAGAT+TGG | - | chr2_3:44477656-44477675 | Msa0293550:intron | 20.0% |
| !! | TGTCATATATCACAAATTAT+AGG | + | chr2_3:44477917-44477936 | None:intergenic | 20.0% |
| !! | TAACGTTAAAACAATAATTC+TGG | - | chr2_3:44478164-44478183 | Msa0293550:intron | 20.0% |
| !! | AACGTTAAAACAATAATTCT+GGG | - | chr2_3:44478165-44478184 | Msa0293550:intron | 20.0% |
| !!! | AAAATTTTGCAGCAAATTTA+GGG | + | chr2_3:44478389-44478408 | None:intergenic | 20.0% |
| !! | TAGAAATTGATTGTTCTTAA+TGG | - | chr2_3:44478642-44478661 | Msa0293550:CDS | 20.0% |
| !!! | TAATTTGTTGATCTTTGTGT+TGG | - | chr2_3:44471133-44471152 | Msa0293550:three_prime_UTR | 25.0% |
| !!! | AATTTGTTGATCTTTGTGTT+GGG | - | chr2_3:44471134-44471153 | Msa0293550:three_prime_UTR | 25.0% |
| !!! | CTCAATTTTCGTTTTTTCTA+TGG | - | chr2_3:44471286-44471305 | Msa0293550:CDS | 25.0% |
| !!! | GTTTCGTTTTTGTTTATGAT+TGG | - | chr2_3:44471308-44471327 | Msa0293550:intron | 25.0% |
| !!! | GTGCAAAATTTGATTTTTGT+TGG | - | chr2_3:44471485-44471504 | Msa0293550:intron | 25.0% |
| ! | ATTTGTGAAATTTGGGAAAT+GGG | - | chr2_3:44471510-44471529 | Msa0293550:intron | 25.0% |
| !! | TTACGTGAAATTCTGAAAAT+GGG | - | chr2_3:44471634-44471653 | Msa0293550:intron | 25.0% |
| !!! | GATTTTGAATGTTTTGTTTG+TGG | - | chr2_3:44471682-44471701 | Msa0293550:intron | 25.0% |
| !!! | TTTTGAATGTTTTGTTTGTG+GGG | - | chr2_3:44471684-44471703 | Msa0293550:intron | 25.0% |
| !!! | TTTTGTGGAATTTGTTATTC+TGG | - | chr2_3:44471780-44471799 | Msa0293550:intron | 25.0% |
| !!! | GAATTTGTTATTCTGGAATT+GGG | - | chr2_3:44471787-44471806 | Msa0293550:intron | 25.0% |
| !!! | TTTTCATTGTTTTTGGTTCT+AGG | - | chr2_3:44471877-44471896 | Msa0293550:CDS | 25.0% |
| !!! | TTTCATTGTTTTTGGTTCTA+GGG | - | chr2_3:44471878-44471897 | Msa0293550:CDS | 25.0% |
| !! | CTGAATCTGAAATATGTTTA+TGG | - | chr2_3:44472586-44472605 | Msa0293550:intron | 25.0% |
| ! | TCAATGAAATCTCCAAATAA+AGG | + | chr2_3:44472663-44472682 | None:intergenic | 25.0% |
| !!! | AATACAGTTGGTAAAAGTAA+TGG | - | chr2_3:44472904-44472923 | Msa0293550:intron | 25.0% |
| !!! | ATTTTATTTAAGATGGACAG+TGG | - | chr2_3:44473029-44473048 | Msa0293550:intron | 25.0% |
| !!! | TTTACTTTTGAGGATCATAT+TGG | - | chr2_3:44473348-44473367 | Msa0293550:intron | 25.0% |
| ! | AAAATTCCTTGATGTTATTG+GGG | + | chr2_3:44473442-44473461 | None:intergenic | 25.0% |
| ! | TAAATTGAGGTCCATATTAA+GGG | + | chr2_3:44473512-44473531 | None:intergenic | 25.0% |
| ! | TTAAATTGAGGTCCATATTA+AGG | + | chr2_3:44473513-44473532 | None:intergenic | 25.0% |
| ! | TAATATGGACCTCAATTTAA+AGG | - | chr2_3:44473513-44473532 | Msa0293550:intron | 25.0% |
| ! | CAGAATTTGTATACACAAAA+TGG | + | chr2_3:44473595-44473614 | None:intergenic | 25.0% |
| ! | ATAAACTAGTTAATGTACAG+CGG | + | chr2_3:44473676-44473695 | None:intergenic | 25.0% |
| ! | ATTCAGATCTTTATGTGATT+TGG | + | chr2_3:44473719-44473738 | None:intergenic | 25.0% |
| !!! | AAAGTTGAGATTTTTCAAAG+GGG | - | chr2_3:44473886-44473905 | Msa0293550:intron | 25.0% |
| ! | AATGGTAGAAGAATTGTAAA+TGG | - | chr2_3:44473937-44473956 | Msa0293550:intron | 25.0% |
| ! | ATGGTAGAAGAATTGTAAAT+GGG | - | chr2_3:44473938-44473957 | Msa0293550:intron | 25.0% |
| ! | TAATATGGACCATATTGAAA+GGG | + | chr2_3:44474262-44474281 | None:intergenic | 25.0% |
| ! | TTTCAATATGGTCCATATTA+GGG | - | chr2_3:44474262-44474281 | Msa0293550:intron | 25.0% |
| ! | AGTTCAATAAAACTTATGCA+GGG | + | chr2_3:44474371-44474390 | None:intergenic | 25.0% |
| ! | AAGTTCAATAAAACTTATGC+AGG | + | chr2_3:44474372-44474391 | None:intergenic | 25.0% |
| ! | AGTTGAATAAAACTTATGCA+GGG | + | chr2_3:44474474-44474493 | None:intergenic | 25.0% |
| ! | AAGTTGAATAAAACTTATGC+AGG | + | chr2_3:44474475-44474494 | None:intergenic | 25.0% |
| ! | TTAACACAACTGAATCAATA+AGG | - | chr2_3:44474610-44474629 | Msa0293550:intron | 25.0% |
| !! | TGATAGATAAAGTACCTAAA+TGG | - | chr2_3:44474941-44474960 | Msa0293550:intron | 25.0% |
| !! | GATAGATAAAGTACCTAAAT+GGG | - | chr2_3:44474942-44474961 | Msa0293550:intron | 25.0% |
| ! | AATCAGGATAATATCTGATT+TGG | + | chr2_3:44475499-44475518 | None:intergenic | 25.0% |
| ! | AAATCAGATATTATCCTGAT+TGG | - | chr2_3:44475498-44475517 | Msa0293550:intron | 25.0% |
| ! | TATTATCCTGATTGGATTTA+TGG | - | chr2_3:44475506-44475525 | Msa0293550:intron | 25.0% |
| ! | ATTATCCTGATTGGATTTAT+GGG | - | chr2_3:44475507-44475526 | Msa0293550:intron | 25.0% |
| ! | AACTACAATATATATACGTG+TGG | + | chr2_3:44475592-44475611 | None:intergenic | 25.0% |
| !! | GTATGAAATCTGAAATTGTA+CGG | + | chr2_3:44475837-44475856 | None:intergenic | 25.0% |
| ! | ATTTCATCTTCCACTTAATT+TGG | - | chr2_3:44476087-44476106 | Msa0293550:intron | 25.0% |
| ! | TTTCATCTTCCACTTAATTT+GGG | - | chr2_3:44476088-44476107 | Msa0293550:intron | 25.0% |
| ! | ACTTGTAGCATACTTAATAT+TGG | + | chr2_3:44476298-44476317 | None:intergenic | 25.0% |
| ! | TATTAAGTATGCTACAAGTT+TGG | - | chr2_3:44476299-44476318 | Msa0293550:intron | 25.0% |
| ! | ATTAAGTATGCTACAAGTTT+GGG | - | chr2_3:44476300-44476319 | Msa0293550:intron | 25.0% |
| ! | ACTAGAGTTGAGTTAAATTA+GGG | + | chr2_3:44476355-44476374 | None:intergenic | 25.0% |
| ! | AACTAGAGTTGAGTTAAATT+AGG | + | chr2_3:44476356-44476375 | None:intergenic | 25.0% |
| !!! | CACTGTTATTTTTAGTTTGT+AGG | - | chr2_3:44476603-44476622 | Msa0293550:intron | 25.0% |
| ! | AATCAAAGGAATTTGTATCA+TGG | - | chr2_3:44476632-44476651 | Msa0293550:intron | 25.0% |
| ! | ACACATATCTATGTTTCAAT+AGG | - | chr2_3:44476691-44476710 | Msa0293550:intron | 25.0% |
| !!! | AATTTTATTTGAATTGTGGG+AGG | + | chr2_3:44477300-44477319 | None:intergenic | 25.0% |
| !!! | TTTTAAAAACAAGACCAAAC+CGG | + | chr2_3:44477371-44477390 | None:intergenic | 25.0% |
| !!! | TTGGTCTTGTTTTTAAAACA+TGG | - | chr2_3:44477373-44477392 | Msa0293550:intron | 25.0% |
| !!! | TGGTCTTGTTTTTAAAACAT+GGG | - | chr2_3:44477374-44477393 | Msa0293550:intron | 25.0% |
| ! | GTTATGGATTTAATTGTTCT+TGG | - | chr2_3:44477439-44477458 | Msa0293550:intron | 25.0% |
| ! | TTCAATAACTTCATTGTTGA+CGG | + | chr2_3:44477551-44477570 | None:intergenic | 25.0% |
| ! | AAGCAAAAACTATACAAGTA+AGG | + | chr2_3:44477578-44477597 | None:intergenic | 25.0% |
| ! | AACATCATCAACATATCAAT+GGG | - | chr2_3:44478317-44478336 | Msa0293550:intron | 25.0% |
| !! | GAAAATTTTGCAGCAAATTT+AGG | + | chr2_3:44478390-44478409 | None:intergenic | 25.0% |
| !!! | AATTTGCTGCAAAATTTTCT+CGG | - | chr2_3:44478391-44478410 | Msa0293550:CDS | 25.0% |
| ! | GTCTACATTTATACAAGAAA+AGG | + | chr2_3:44478564-44478583 | None:intergenic | 25.0% |
| !! | TAACACAAACTTTTCTTTCA+TGG | + | chr2_3:44478586-44478605 | None:intergenic | 25.0% |
| ! | AAATTGATTGTTCTTAATGG+TGG | - | chr2_3:44478645-44478664 | Msa0293550:CDS | 25.0% |
| TGAGCTTACAATGATGAAAT+AGG | + | chr2_3:44471270-44471289 | None:intergenic | 30.0% | |
| !!! | TGGTTTGTTTGTTTTGAAAG+TGG | - | chr2_3:44471328-44471347 | Msa0293550:intron | 30.0% |
| !! | TTGTTGGAGTTTTGTGAAAT+TGG | - | chr2_3:44471377-44471396 | Msa0293550:intron | 30.0% |
| !! | TGTTGGAGTTTTGTGAAATT+GGG | - | chr2_3:44471378-44471397 | Msa0293550:intron | 30.0% |
| ! | TTTTGTGAAATTGGGGAAAT+GGG | - | chr2_3:44471386-44471405 | Msa0293550:intron | 30.0% |
| !!! | ATTTTGGTTGATTTGGTTTC+TGG | - | chr2_3:44471416-44471435 | Msa0293550:intron | 30.0% |
| !!! | TTTTGGTTGATTTGGTTTCT+GGG | - | chr2_3:44471417-44471436 | Msa0293550:intron | 30.0% |
| !! | TCTGGGTTTTGTAGAATTTT+TGG | - | chr2_3:44471434-44471453 | Msa0293550:intron | 30.0% |
| TGTTGGAGATTTGTGAAATT+TGG | - | chr2_3:44471502-44471521 | Msa0293550:intron | 30.0% | |
| GTTGGAGATTTGTGAAATTT+GGG | - | chr2_3:44471503-44471522 | Msa0293550:intron | 30.0% | |
| GATTTGTGAAATTTGGGAAA+TGG | - | chr2_3:44471509-44471528 | Msa0293550:intron | 30.0% | |
| !!! | TTTGGAGATTTTGGTTGATT+TGG | - | chr2_3:44471533-44471552 | Msa0293550:intron | 30.0% |
| !!! | ATTTTGGTTGATTTGGATTC+TGG | - | chr2_3:44471540-44471559 | Msa0293550:intron | 30.0% |
| !!! | TTTTGGTTGATTTGGATTCT+GGG | - | chr2_3:44471541-44471560 | Msa0293550:intron | 30.0% |
| ! | GTTACGTGAAATTCTGAAAA+TGG | - | chr2_3:44471633-44471652 | Msa0293550:intron | 30.0% |
| ! | TACGTGAAATTCTGAAAATG+GGG | - | chr2_3:44471635-44471654 | Msa0293550:intron | 30.0% |
| !! | GGAATTTGTTATTCTGGAAT+TGG | - | chr2_3:44471786-44471805 | Msa0293550:intron | 30.0% |
| !! | TGAAAGTGTTAAACTTCATC+AGG | - | chr2_3:44471823-44471842 | Msa0293550:intron | 30.0% |
| !!! | TTTTGTACTTTGGAGTTGAT+TGG | - | chr2_3:44471909-44471928 | Msa0293550:CDS | 30.0% |
| TGAGAAAAGAAAAGGAAGAA+GGG | - | chr2_3:44472001-44472020 | Msa0293550:intron | 30.0% | |
| ! | TATTGATAACAACACAGTGA+AGG | + | chr2_3:44472287-44472306 | None:intergenic | 30.0% |
| TATTTCAGATTCAGAGATCA+GGG | + | chr2_3:44472580-44472599 | None:intergenic | 30.0% | |
| ATATTTCAGATTCAGAGATC+AGG | + | chr2_3:44472581-44472600 | None:intergenic | 30.0% | |
| ATATGTTTATGGGATTACTG+TGG | - | chr2_3:44472597-44472616 | Msa0293550:intron | 30.0% | |
| TATGTTTATGGGATTACTGT+GGG | - | chr2_3:44472598-44472617 | Msa0293550:intron | 30.0% | |
| !! | AATGGATTAATGAGGTAATC+AGG | - | chr2_3:44472628-44472647 | Msa0293550:intron | 30.0% |
| GCAGAAATGTATCGTATATA+AGG | + | chr2_3:44472693-44472712 | None:intergenic | 30.0% | |
| ! | CGAGAAAATGCTTTATTAGT+GGG | - | chr2_3:44472712-44472731 | Msa0293550:intron | 30.0% |
| TCTGTTCATGATGATTGAAA+TGG | - | chr2_3:44472799-44472818 | Msa0293550:intron | 30.0% | |
| TTCATGATGATTGAAATGGT+AGG | - | chr2_3:44472803-44472822 | Msa0293550:intron | 30.0% | |
| AGGTAAGTAATGAATACAGT+TGG | - | chr2_3:44472892-44472911 | Msa0293550:intron | 30.0% | |
| !! | AGTTGGTAAAAGTAATGGAT+TGG | - | chr2_3:44472909-44472928 | Msa0293550:intron | 30.0% |
| !! | GTTGGTAAAAGTAATGGATT+GGG | - | chr2_3:44472910-44472929 | Msa0293550:intron | 30.0% |
| AAATTCCTTGATGTTATTGG+GGG | + | chr2_3:44473441-44473460 | None:intergenic | 30.0% | |
| AGGTTCAATCCTTTAAATTG+AGG | + | chr2_3:44473525-44473544 | None:intergenic | 30.0% | |
| TTATAGCTGGTAATTTACTG+AGG | + | chr2_3:44473545-44473564 | None:intergenic | 30.0% | |
| TCAGTAAATTACCAGCTATA+AGG | - | chr2_3:44473544-44473563 | Msa0293550:intron | 30.0% | |
| CAGTAAATTACCAGCTATAA+GGG | - | chr2_3:44473545-44473564 | Msa0293550:intron | 30.0% | |
| AGTAAATTACCAGCTATAAG+GGG | - | chr2_3:44473546-44473565 | Msa0293550:intron | 30.0% | |
| TGTATACACAAAATGGAAAC+CGG | + | chr2_3:44473588-44473607 | None:intergenic | 30.0% | |
| ! | ATTATGAGGATGGGTTTAAA+AGG | + | chr2_3:44473646-44473665 | None:intergenic | 30.0% |
| ! | AAGTATGAGGTTTTCTTGTT+TGG | + | chr2_3:44473837-44473856 | None:intergenic | 30.0% |
| !! | AAGTTGAGATTTTTCAAAGG+GGG | - | chr2_3:44473887-44473906 | Msa0293550:intron | 30.0% |
| ! | AGCTTTAACTTTCGTTTCAA+TGG | - | chr2_3:44473919-44473938 | Msa0293550:intron | 30.0% |
| AGTGAGGTAAAACTATAAAC+TGG | - | chr2_3:44473961-44473980 | Msa0293550:intron | 30.0% | |
| AACCATTGAAATGGTTTCAT+GGG | + | chr2_3:44474081-44474100 | None:intergenic | 30.0% | |
| CTATTACTCTGTGTTTACAA+AGG | + | chr2_3:44474143-44474162 | None:intergenic | 30.0% | |
| CTTTGTAAACACAGAGTAAT+AGG | - | chr2_3:44474141-44474160 | Msa0293550:intron | 30.0% | |
| ATATTGAAAGGGTCCAATTA+TGG | + | chr2_3:44474251-44474270 | None:intergenic | 30.0% | |
| ATAATTGGACCCTTTCAATA+TGG | - | chr2_3:44474250-44474269 | Msa0293550:intron | 30.0% | |
| CTAATATGGACCATATTGAA+AGG | + | chr2_3:44474263-44474282 | None:intergenic | 30.0% | |
| CTTTCAATATGGTCCATATT+AGG | - | chr2_3:44474261-44474280 | Msa0293550:intron | 30.0% | |
| TTCAATATGGTCCATATTAG+GGG | - | chr2_3:44474263-44474282 | Msa0293550:intron | 30.0% | |
| ATTCAGGGTTTATTGAGATT+TGG | - | chr2_3:44474677-44474696 | Msa0293550:intron | 30.0% | |
| TTCAGGGTTTATTGAGATTT+GGG | - | chr2_3:44474678-44474697 | Msa0293550:intron | 30.0% | |
| CTTATTTAGTTGTAACACAC+TGG | + | chr2_3:44474989-44475008 | None:intergenic | 30.0% | |
| ATCGACTAAGAAAGAATACA+AGG | + | chr2_3:44475540-44475559 | None:intergenic | 30.0% | |
| ATTCTATTCCCTAATCTAGA+GGG | - | chr2_3:44475558-44475577 | Msa0293550:intron | 30.0% | |
| TTCTCAATGTGATAGAATGA+GGG | + | chr2_3:44475617-44475636 | None:intergenic | 30.0% | |
| ATTCTCAATGTGATAGAATG+AGG | + | chr2_3:44475618-44475637 | None:intergenic | 30.0% | |
| ATTGGTTATGTTATGATCCA+TGG | - | chr2_3:44475715-44475734 | Msa0293550:intron | 30.0% | |
| ! | AACTAACGTGATTTCTCTTT+TGG | + | chr2_3:44475781-44475800 | None:intergenic | 30.0% |
| ! | GTGATTAAAGTATCATACTC+AGG | + | chr2_3:44475938-44475957 | None:intergenic | 30.0% |
| !! | TCTATTTCTGCAATGTCATA+TGG | + | chr2_3:44475983-44476002 | None:intergenic | 30.0% |
| AGAAATAGATGCTCTTATCT+TGG | - | chr2_3:44475994-44476013 | Msa0293550:intron | 30.0% | |
| ! | AGTTTTTACAGCATTTAGCA+AGG | + | chr2_3:44476142-44476161 | None:intergenic | 30.0% |
| ! | ATAATTTTCATCTGTTTCCG+AGG | + | chr2_3:44476541-44476560 | None:intergenic | 30.0% |
| ! | CCAGTATTTTCCAATTTCAT+AGG | + | chr2_3:44476571-44476590 | None:intergenic | 30.0% |
| CCTATGAAATTGGAAAATAC+TGG | - | chr2_3:44476568-44476587 | Msa0293550:intron | 30.0% | |
| AAGGAATTTGTATCATGGAA+AGG | - | chr2_3:44476637-44476656 | Msa0293550:intron | 30.0% | |
| !! | TCATTCATTTGTTGTCAAGT+CGG | - | chr2_3:44476731-44476750 | Msa0293550:intron | 30.0% |
| ! | CTTGATGGAAATTTTTGACA+GGG | + | chr2_3:44477125-44477144 | None:intergenic | 30.0% |
| ! | TCTTGATGGAAATTTTTGAC+AGG | + | chr2_3:44477126-44477145 | None:intergenic | 30.0% |
| TTAAGGACCAAAAATCTTGA+TGG | + | chr2_3:44477140-44477159 | None:intergenic | 30.0% | |
| TGCTTAAGAAAAATGTCACA+TGG | - | chr2_3:44477162-44477181 | Msa0293550:intron | 30.0% | |
| !!! | GAAAAGATTAGCTTTTTGGT+TGG | + | chr2_3:44477326-44477345 | None:intergenic | 30.0% |
| !!! | GGTCTTGTTTTTAAAACATG+GGG | - | chr2_3:44477375-44477394 | Msa0293550:intron | 30.0% |
| !! | TTGGCTTTTCAGCATTATAT+GGG | + | chr2_3:44477402-44477421 | None:intergenic | 30.0% |
| GAATAAGCATCTCTATGTTA+TGG | - | chr2_3:44477423-44477442 | Msa0293550:intron | 30.0% | |
| CGGATAATGAAAACGATAAA+AGG | - | chr2_3:44477479-44477498 | Msa0293550:intron | 30.0% | |
| AATTATGCTTTCACCAAGAT+TGG | + | chr2_3:44477723-44477742 | None:intergenic | 30.0% | |
| ! | AATCTTGGTGAAAGCATAAT+TGG | - | chr2_3:44477722-44477741 | Msa0293550:intron | 30.0% |
| !! | GTTTTTAAGCATACATTGCA+TGG | - | chr2_3:44477960-44477979 | Msa0293550:intron | 30.0% |
| TACTTGCATGTATGAATTCA+CGG | - | chr2_3:44478012-44478031 | Msa0293550:intron | 30.0% | |
| ! | AAAAATTCCATTGTCCGTTT+TGG | + | chr2_3:44478143-44478162 | None:intergenic | 30.0% |
| CAGATATATGCAGATTAAGT+CGG | + | chr2_3:44478222-44478241 | None:intergenic | 30.0% | |
| CATTATTGAGCTGCAAAAAA+AGG | + | chr2_3:44478289-44478308 | None:intergenic | 30.0% | |
| CAACATCATCAACATATCAA+TGG | - | chr2_3:44478316-44478335 | Msa0293550:intron | 30.0% | |
| ! | AAATTTAGGGATGCAAGTTT+TGG | + | chr2_3:44478376-44478395 | None:intergenic | 30.0% |
| ! | AGTTTGTGTTACTGTAATCA+AGG | - | chr2_3:44478595-44478614 | Msa0293550:CDS | 30.0% |
| TATGTTTGTGATGTTGGAAG+AGG | + | chr2_3:44470926-44470945 | None:intergenic | 35.0% | |
| AGGGTTTATGTTTGTGATGT+TGG | + | chr2_3:44470932-44470951 | None:intergenic | 35.0% | |
| ! | GTTGGTGTAAATGTGAGTTT+TGG | + | chr2_3:44470966-44470985 | None:intergenic | 35.0% |
| ! | ATGTGAGAGTTTAAGGTTGT+TGG | + | chr2_3:44470984-44471003 | None:intergenic | 35.0% |
| ! | ATTGCATCATGTTGTTGTTG+AGG | + | chr2_3:44471022-44471041 | None:intergenic | 35.0% |
| !!! | GTTCTCCTATTTTGGTTACT+GGG | - | chr2_3:44471156-44471175 | Msa0293550:three_prime_UTR | 35.0% |
| !!! | ATTGTTGCTGCTTTTTTGCT+TGG | - | chr2_3:44471194-44471213 | Msa0293550:three_prime_UTR | 35.0% |
| ! | TTTTGCTTGGTACTCTTACT+TGG | - | chr2_3:44471207-44471226 | Msa0293550:exon | 35.0% |
| !! | GTTGGAGTTTTGTGAAATTG+GGG | - | chr2_3:44471379-44471398 | Msa0293550:intron | 35.0% |
| ! | GTTTTGTGAAATTGGGGAAA+TGG | - | chr2_3:44471385-44471404 | Msa0293550:intron | 35.0% |
| !!! | TGTGGAGATTTTGGTTGATT+TGG | - | chr2_3:44471409-44471428 | Msa0293550:intron | 35.0% |
| ! | TGAAATTTGGGAAATGGGTT+TGG | - | chr2_3:44471515-44471534 | Msa0293550:intron | 35.0% |
| !! | TTTGGTTGATTTGGATTCTG+GGG | - | chr2_3:44471542-44471561 | Msa0293550:intron | 35.0% |
| !!! | CACGTTTTAGTTGAAATCAC+TGG | + | chr2_3:44471663-44471682 | None:intergenic | 35.0% |
| !!! | AATGGGTTTTGAGAGTTTTG+TGG | - | chr2_3:44471765-44471784 | Msa0293550:intron | 35.0% |
| !! | GGTTGATGCTTTTTGTACTT+TGG | - | chr2_3:44471899-44471918 | Msa0293550:CDS | 35.0% |
| !! | TACTTTGGAGTTGATTGGTT+TGG | - | chr2_3:44471914-44471933 | Msa0293550:CDS | 35.0% |
| !! | ACTTTGGAGTTGATTGGTTT+GGG | - | chr2_3:44471915-44471934 | Msa0293550:CDS | 35.0% |
| !! | ATTGGTTTGGGGTTTGTTTA+GGG | - | chr2_3:44471927-44471946 | Msa0293550:intron | 35.0% |
| AGCTGCAACAAAAGTCAAAA+TGG | - | chr2_3:44471953-44471972 | Msa0293550:intron | 35.0% | |
| AGTCAAAATGGCACAGAAAA+TGG | - | chr2_3:44471965-44471984 | Msa0293550:intron | 35.0% | |
| CTGAGAAAAGAAAAGGAAGA+AGG | - | chr2_3:44472000-44472019 | Msa0293550:intron | 35.0% | |
| GAGAAAAGAAAAGGAAGAAG+GGG | - | chr2_3:44472002-44472021 | Msa0293550:intron | 35.0% | |
| ! | TGTGCTTTCCTCACAATTTT+TGG | - | chr2_3:44472065-44472084 | Msa0293550:intron | 35.0% |
| !!! | TTCCTCACAATTTTTGGAGT+TGG | - | chr2_3:44472071-44472090 | Msa0293550:intron | 35.0% |
| !! | TAGATCAGTTGGTAAACTAG+GGG | + | chr2_3:44472253-44472272 | None:intergenic | 35.0% |
| !! | GTAGATCAGTTGGTAAACTA+GGG | + | chr2_3:44472254-44472273 | None:intergenic | 35.0% |
| !! | AGTAGATCAGTTGGTAAACT+AGG | + | chr2_3:44472255-44472274 | None:intergenic | 35.0% |
| AGGTTGCATTGTCCTTTATT+TGG | - | chr2_3:44472648-44472667 | Msa0293550:intron | 35.0% | |
| ! | GCGAGAAAATGCTTTATTAG+TGG | - | chr2_3:44472711-44472730 | Msa0293550:intron | 35.0% |
| TTGTTTGTTTCCCTAACAGT+TGG | - | chr2_3:44472867-44472886 | Msa0293550:intron | 35.0% | |
| ACTTACCTATCCAACTGTTA+GGG | + | chr2_3:44472880-44472899 | None:intergenic | 35.0% | |
| TACTTACCTATCCAACTGTT+AGG | + | chr2_3:44472881-44472900 | None:intergenic | 35.0% | |
| TATGGAGAGAGTAAATGTAG+AGG | - | chr2_3:44472972-44472991 | Msa0293550:intron | 35.0% | |
| AGAACAGTCAATGTAGAGTT+AGG | - | chr2_3:44473191-44473210 | Msa0293550:intron | 35.0% | |
| GAACAGTCAATGTAGAGTTA+GGG | - | chr2_3:44473192-44473211 | Msa0293550:intron | 35.0% | |
| AAACAGAGTAAGGATTTGTG+CGG | - | chr2_3:44473246-44473265 | Msa0293550:intron | 35.0% | |
| TAAAATGGGAGCCCTTAATA+TGG | - | chr2_3:44473498-44473517 | Msa0293550:intron | 35.0% | |
| GGCTTAAGAATTATGAGGAT+GGG | + | chr2_3:44473655-44473674 | None:intergenic | 35.0% | |
| AGAAAACCTCATACTTGTGT+TGG | - | chr2_3:44473841-44473860 | Msa0293550:intron | 35.0% | |
| AAGAATTGTAAATGGGAGTG+AGG | - | chr2_3:44473945-44473964 | Msa0293550:intron | 35.0% | |
| CAACCATTGAAATGGTTTCA+TGG | + | chr2_3:44474082-44474101 | None:intergenic | 35.0% | |
| CTTTCGTTCAACCATTGAAA+TGG | + | chr2_3:44474090-44474109 | None:intergenic | 35.0% | |
| TTTATAGAATCGGGCAACTT+GGG | + | chr2_3:44475115-44475134 | None:intergenic | 35.0% | |
| ! | TTTTATAGAATCGGGCAACT+TGG | + | chr2_3:44475116-44475135 | None:intergenic | 35.0% |
| ATACTGATAACACTGATCCA+GGG | + | chr2_3:44475147-44475166 | None:intergenic | 35.0% | |
| AGATTGTGCTCATTTCACAT+TGG | + | chr2_3:44475221-44475240 | None:intergenic | 35.0% | |
| ! | GAAATGAGCACAATCTCTTT+TGG | - | chr2_3:44475225-44475244 | Msa0293550:intron | 35.0% |
| GTCAAGTCTATACCAACAAA+GGG | + | chr2_3:44475294-44475313 | None:intergenic | 35.0% | |
| !! | ATTTGAGTTGAACTGAGTTG+TGG | - | chr2_3:44475371-44475390 | Msa0293550:intron | 35.0% |
| ! | CTGGTTTAACAGGTGTATTT+TGG | + | chr2_3:44475448-44475467 | None:intergenic | 35.0% |
| AGAATCCCATAAATCCAATC+AGG | + | chr2_3:44475515-44475534 | None:intergenic | 35.0% | |
| GATTCTATTCCCTAATCTAG+AGG | - | chr2_3:44475557-44475576 | Msa0293550:intron | 35.0% | |
| GCAATCTTGAATCTCCTATT+TGG | - | chr2_3:44475672-44475691 | Msa0293550:intron | 35.0% | |
| !!! | CGTGATTTCTCTTTTGGTTT+AGG | + | chr2_3:44475775-44475794 | None:intergenic | 35.0% |
| AATTGTACGGTTTCCTTTCT+TGG | + | chr2_3:44475824-44475843 | None:intergenic | 35.0% | |
| CGATATTCTTGAGGTGAAAA+TGG | + | chr2_3:44475904-44475923 | None:intergenic | 35.0% | |
| ACCTCAAGAATATCGTTGAA+GGG | - | chr2_3:44475909-44475928 | Msa0293550:intron | 35.0% | |
| AGTACTTGACCCAAATTAAG+TGG | + | chr2_3:44476100-44476119 | None:intergenic | 35.0% | |
| AAGTTTAACCGCGTTAAAGT+GGG | + | chr2_3:44476188-44476207 | None:intergenic | 35.0% | |
| TTCACTTTATACTTCGGTCA+TGG | - | chr2_3:44476206-44476225 | Msa0293550:intron | 35.0% | |
| TTATACTTCGGTCATGGAAA+AGG | - | chr2_3:44476212-44476231 | Msa0293550:intron | 35.0% | |
| GCATACTTAATATTGGAACG+AGG | + | chr2_3:44476291-44476310 | None:intergenic | 35.0% | |
| AGAATTGATACATTCCGTGA+TGG | - | chr2_3:44476458-44476477 | Msa0293550:intron | 35.0% | |
| CAAGTATATACGTTCCATCA+CGG | + | chr2_3:44476475-44476494 | None:intergenic | 35.0% | |
| ! | AGGATCATTAGTTGATTCCT+CGG | - | chr2_3:44476521-44476540 | Msa0293550:intron | 35.0% |
| TTTGTAGGGAAGAGAATCAA+AGG | - | chr2_3:44476618-44476637 | Msa0293550:intron | 35.0% | |
| AGCTATGCATCTAAACATTG+TGG | - | chr2_3:44476792-44476811 | Msa0293550:intron | 35.0% | |
| ATTGTGGATCCTACAAATTG+AGG | - | chr2_3:44476808-44476827 | Msa0293550:intron | 35.0% | |
| TTGTGGATCCTACAAATTGA+GGG | - | chr2_3:44476809-44476828 | Msa0293550:intron | 35.0% | |
| ! | CTTCAATTTGTTCACATGGA+TGG | - | chr2_3:44476916-44476935 | Msa0293550:intron | 35.0% |
| ! | GTCCCTATAAAATTTTCCGT+CGG | - | chr2_3:44477058-44477077 | Msa0293550:CDS | 35.0% |
| ! | TGCCGACGGAAAATTTTATA+GGG | + | chr2_3:44477063-44477082 | None:intergenic | 35.0% |
| ! | ATGCCGACGGAAAATTTTAT+AGG | + | chr2_3:44477064-44477083 | None:intergenic | 35.0% |
| !!! | CTGGGAAAAGATTAGCTTTT+TGG | + | chr2_3:44477330-44477349 | None:intergenic | 35.0% |
| CAGGTTCAACAAATTCAACT+GGG | + | chr2_3:44477348-44477367 | None:intergenic | 35.0% | |
| !!! | GTTGGCTTTTCAGCATTATA+TGG | + | chr2_3:44477403-44477422 | None:intergenic | 35.0% |
| ACATAGAGATGCTTATTCGT+TGG | + | chr2_3:44477421-44477440 | None:intergenic | 35.0% | |
| GGAATTTAAGTCAATGAGGA+AGG | + | chr2_3:44477530-44477549 | None:intergenic | 35.0% | |
| TGACGGAATTTAAGTCAATG+AGG | + | chr2_3:44477534-44477553 | None:intergenic | 35.0% | |
| TGCAAGTAACACATGTTGAT+AGG | + | chr2_3:44478000-44478019 | None:intergenic | 35.0% | |
| ! | GGCTTTTGTTAAAATCATGG+TGG | + | chr2_3:44478068-44478087 | None:intergenic | 35.0% |
| !!! | GCTGGCTTTTGTTAAAATCA+TGG | + | chr2_3:44478071-44478090 | None:intergenic | 35.0% |
| ! | AAGCCAGCTTTAACAAAATC+AGG | - | chr2_3:44478083-44478102 | Msa0293550:intron | 35.0% |
| ! | AGCCAGCTTTAACAAAATCA+GGG | - | chr2_3:44478084-44478103 | Msa0293550:intron | 35.0% |
| TAATTCTGGGCTGAAAATGA+AGG | - | chr2_3:44478178-44478197 | Msa0293550:intron | 35.0% | |
| AATTCTGGGCTGAAAATGAA+GGG | - | chr2_3:44478179-44478198 | Msa0293550:intron | 35.0% | |
| ATATATGCAGATTAAGTCGG+AGG | + | chr2_3:44478219-44478238 | None:intergenic | 35.0% | |
| CGACTTAATCTGCATATATC+TGG | - | chr2_3:44478220-44478239 | Msa0293550:intron | 35.0% | |
| AGTAAGACACTTCAACATCT+AGG | + | chr2_3:44478474-44478493 | None:intergenic | 35.0% | |
| !!! | AGTTTTGGAGAGAGCGAATA+GGG | + | chr2_3:44470951-44470970 | None:intergenic | 40.0% |
| GCGAAGAATGTGAGAGTTTA+AGG | + | chr2_3:44470991-44471010 | None:intergenic | 40.0% | |
| TCGAGTGTTCAAGATGTTGT+TGG | - | chr2_3:44471053-44471072 | Msa0293550:three_prime_UTR | 40.0% | |
| AGTGTTCAAGATGTTGTTGG+AGG | - | chr2_3:44471056-44471075 | Msa0293550:three_prime_UTR | 40.0% | |
| TAACAAAGAAGATTGCCACG+TGG | + | chr2_3:44471111-44471130 | None:intergenic | 40.0% | |
| ! | TGTGTTGGGTTCTCCTATTT+TGG | - | chr2_3:44471148-44471167 | Msa0293550:three_prime_UTR | 40.0% |
| !!! | GGTTCTCCTATTTTGGTTAC+TGG | - | chr2_3:44471155-44471174 | Msa0293550:three_prime_UTR | 40.0% |
| GACAACCCAGTAACCAAAAT+AGG | + | chr2_3:44471164-44471183 | None:intergenic | 40.0% | |
| ! | TTACTGGGTTGTCGTTTGAA+GGG | - | chr2_3:44471171-44471190 | Msa0293550:three_prime_UTR | 40.0% |
| !! | GGAAATGGGTTTGGAGATTT+TGG | - | chr2_3:44471524-44471543 | Msa0293550:intron | 40.0% |
| !!! | AATGTTTTGTTTGTGGGGTG+TGG | - | chr2_3:44471689-44471708 | Msa0293550:intron | 40.0% |
| !!! | ATGTTTTGTTTGTGGGGTGT+GGG | - | chr2_3:44471690-44471709 | Msa0293550:intron | 40.0% |
| !! | CTTTGGAGTTGATTGGTTTG+GGG | - | chr2_3:44471916-44471935 | Msa0293550:CDS | 40.0% |
| !! | GATTGGTTTGGGGTTTGTTT+AGG | - | chr2_3:44471926-44471945 | Msa0293550:intron | 40.0% |
| ATGGCACAGAAAATGGAACA+AGG | - | chr2_3:44471972-44471991 | Msa0293550:intron | 40.0% | |
| TGGCACAGAAAATGGAACAA+GGG | - | chr2_3:44471973-44471992 | Msa0293550:intron | 40.0% | |
| CTCCAACTCCAAAAATTGTG+AGG | + | chr2_3:44472076-44472095 | None:intergenic | 40.0% | |
| !!! | CTCACAATTTTTGGAGTTGG+AGG | - | chr2_3:44472074-44472093 | Msa0293550:intron | 40.0% |
| !!! | AATTTTTGGAGTTGGAGGAG+CGG | - | chr2_3:44472079-44472098 | Msa0293550:intron | 40.0% |
| !!! | TTTTCTCAGCTTTGGAGACT+TGG | - | chr2_3:44472104-44472123 | Msa0293550:intron | 40.0% |
| !! | TTTCTCAGCTTTGGAGACTT+GGG | - | chr2_3:44472105-44472124 | Msa0293550:intron | 40.0% |
| TCTCAAGTCAGTAGATCAGT+TGG | + | chr2_3:44472264-44472283 | None:intergenic | 40.0% | |
| AAGCACACGGAACTTTACTA+AGG | + | chr2_3:44472418-44472437 | None:intergenic | 40.0% | |
| GTACCTAGTTACGTCATTCA+AGG | - | chr2_3:44472447-44472466 | Msa0293550:intron | 40.0% | |
| CTACCTTGAATGACGTAACT+AGG | + | chr2_3:44472453-44472472 | None:intergenic | 40.0% | |
| TCATTCAAGGTAGTTCCAAG+AGG | - | chr2_3:44472460-44472479 | Msa0293550:intron | 40.0% | |
| ! | TAGTTCCAAGAGGTACAGAA+GGG | - | chr2_3:44472470-44472489 | Msa0293550:intron | 40.0% |
| AGATGCTAAAATTCCAGCCA+AGG | + | chr2_3:44472515-44472534 | None:intergenic | 40.0% | |
| ! | TGCCTTTGTCAGTTTTCTTC+TGG | - | chr2_3:44472543-44472562 | Msa0293550:intron | 40.0% |
| ! | GCCTTTGTCAGTTTTCTTCT+GGG | - | chr2_3:44472544-44472563 | Msa0293550:intron | 40.0% |
| TTTATGGGATTACTGTGGGT+GGG | - | chr2_3:44472602-44472621 | Msa0293550:intron | 40.0% | |
| !! | GTGGGAAGAATGGATTAATG+AGG | - | chr2_3:44472620-44472639 | Msa0293550:intron | 40.0% |
| TGTTTCCCTAACAGTTGGAT+AGG | - | chr2_3:44472872-44472891 | Msa0293550:intron | 40.0% | |
| GGAAACCTCTTAAGGATCTT+TGG | - | chr2_3:44473050-44473069 | Msa0293550:intron | 40.0% | |
| !! | TGCGAAATTAAGTGCTGACA+GGG | - | chr2_3:44473220-44473239 | Msa0293550:intron | 40.0% |
| GACAGGGATAAAACAGAGTA+AGG | - | chr2_3:44473236-44473255 | Msa0293550:intron | 40.0% | |
| ATACTCCCCCAATAACATCA+AGG | - | chr2_3:44473433-44473452 | Msa0293550:intron | 40.0% | |
| ! | ATAAGGGGTACAGACTTTGT+AGG | - | chr2_3:44473561-44473580 | Msa0293550:intron | 40.0% |
| CGGCTTAAGAATTATGAGGA+TGG | + | chr2_3:44473656-44473675 | None:intergenic | 40.0% | |
| ACAGCGGCTTAAGAATTATG+AGG | + | chr2_3:44473660-44473679 | None:intergenic | 40.0% | |
| CTAGTACCAACACAAGTATG+AGG | + | chr2_3:44473850-44473869 | None:intergenic | 40.0% | |
| TGGTCGTGGATCTTAAAGTT+TGG | + | chr2_3:44473987-44474006 | None:intergenic | 40.0% | |
| ACCACAACTAAGTAAGGAGA+TGG | - | chr2_3:44474003-44474022 | Msa0293550:intron | 40.0% | |
| TCCATCTCCTTACTTAGTTG+TGG | + | chr2_3:44474007-44474026 | None:intergenic | 40.0% | |
| ACAACTAAGTAAGGAGATGG+AGG | - | chr2_3:44474006-44474025 | Msa0293550:intron | 40.0% | |
| CTCACTCATAGATAGAAACC+AGG | - | chr2_3:44474048-44474067 | Msa0293550:intron | 40.0% | |
| TTGAAATGGTTTCATGGGTG+TGG | + | chr2_3:44474076-44474095 | None:intergenic | 40.0% | |
| CACCCATGAAACCATTTCAA+TGG | - | chr2_3:44474076-44474095 | Msa0293550:intron | 40.0% | |
| CAGCATCAATGGTCCATAAT+TGG | - | chr2_3:44474235-44474254 | Msa0293550:intron | 40.0% | |
| TTAAAACGGTGCCCCTAATA+TGG | + | chr2_3:44474277-44474296 | None:intergenic | 40.0% | |
| ! | CGGAGGCTTTTTATAGAATC+GGG | + | chr2_3:44475124-44475143 | None:intergenic | 40.0% |
| ! | GCGGAGGCTTTTTATAGAAT+CGG | + | chr2_3:44475125-44475144 | None:intergenic | 40.0% |
| GATACTGATAACACTGATCC+AGG | + | chr2_3:44475148-44475167 | None:intergenic | 40.0% | |
| TGCTCATTTCACATTGGACT+TGG | + | chr2_3:44475215-44475234 | None:intergenic | 40.0% | |
| AACAAAGCGAACAGTGATTC+AGG | + | chr2_3:44475252-44475271 | None:intergenic | 40.0% | |
| GCTGTACAAATTCCCTTTGT+TGG | - | chr2_3:44475279-44475298 | Msa0293550:intron | 40.0% | |
| GGTCAAGTCTATACCAACAA+AGG | + | chr2_3:44475295-44475314 | None:intergenic | 40.0% | |
| TGGTTCAGTTTAGTATCGTC+TGG | + | chr2_3:44475345-44475364 | None:intergenic | 40.0% | |
| GATACTAAACTGAACCAGAC+TGG | - | chr2_3:44475348-44475367 | Msa0293550:intron | 40.0% | |
| AGTTCAACTCAAATCCAGTC+TGG | + | chr2_3:44475365-44475384 | None:intergenic | 40.0% | |
| ! | TGCTCTGAGTCGTTCTATTT+CGG | + | chr2_3:44475398-44475417 | None:intergenic | 40.0% |
| !!! | TATTTTGGTTCTGTCTGACC+TGG | + | chr2_3:44475433-44475452 | None:intergenic | 40.0% |
| ! | TTGGTCTGATCTGGTTTAAC+AGG | + | chr2_3:44475458-44475477 | None:intergenic | 40.0% |
| !! | TGGTTTAGTTTGGTCTGATC+TGG | + | chr2_3:44475467-44475486 | None:intergenic | 40.0% |
| AGATCAGACCAAACTAAACC+AGG | - | chr2_3:44475466-44475485 | Msa0293550:intron | 40.0% | |
| ACCAAACTAAACCAGGTTGT+GGG | - | chr2_3:44475473-44475492 | Msa0293550:intron | 40.0% | |
| ATTCCCTAATCTAGAGGGAT+TGG | - | chr2_3:44475563-44475582 | Msa0293550:intron | 40.0% | |
| CAACCAATCCCTCTAGATTA+GGG | + | chr2_3:44475569-44475588 | None:intergenic | 40.0% | |
| TTGCAGTCATGAAAGACTTG+AGG | + | chr2_3:44475656-44475675 | None:intergenic | 40.0% | |
| TTATGATCCATGGCTACTGT+GGG | - | chr2_3:44475725-44475744 | Msa0293550:intron | 40.0% | |
| CTACTGTGGGAGAAAATTCA+CGG | - | chr2_3:44475738-44475757 | Msa0293550:intron | 40.0% | |
| AAACTGCTCAACACCAAGAA+AGG | - | chr2_3:44475808-44475827 | Msa0293550:intron | 40.0% | |
| CACCTCAAGAATATCGTTGA+AGG | - | chr2_3:44475908-44475927 | Msa0293550:intron | 40.0% | |
| GGTCAAGTACTAATAGCTAC+AGG | - | chr2_3:44476109-44476128 | Msa0293550:intron | 40.0% | |
| GAAGTTTAACCGCGTTAAAG+TGG | + | chr2_3:44476189-44476208 | None:intergenic | 40.0% | |
| TCAAGTCGGAACTGTAACAT+AGG | - | chr2_3:44476745-44476764 | Msa0293550:intron | 40.0% | |
| CAAGTCGGAACTGTAACATA+GGG | - | chr2_3:44476746-44476765 | Msa0293550:intron | 40.0% | |
| AAGTCGGAACTGTAACATAG+GGG | - | chr2_3:44476747-44476766 | Msa0293550:intron | 40.0% | |
| CTGTAACATAGGGGGTAAAA+AGG | - | chr2_3:44476756-44476775 | Msa0293550:intron | 40.0% | |
| CCTATGTTCCCTCAATTTGT+AGG | + | chr2_3:44476820-44476839 | None:intergenic | 40.0% | |
| CCTACAAATTGAGGGAACAT+AGG | - | chr2_3:44476817-44476836 | Msa0293550:intron | 40.0% | |
| AACCAGATCAGAGATTGAAC+TGG | - | chr2_3:44476884-44476903 | Msa0293550:intron | 40.0% | |
| ! | CGTGCTTCAATTTGTTCACA+TGG | - | chr2_3:44476912-44476931 | Msa0293550:intron | 40.0% |
| ATAGGGACTAAAAATGCCGA+CGG | + | chr2_3:44477077-44477096 | None:intergenic | 40.0% | |
| GCAGGTTCAACAAATTCAAC+TGG | + | chr2_3:44477349-44477368 | None:intergenic | 40.0% | |
| !! | GTTGAATTTGTTGAACCTGC+CGG | - | chr2_3:44477349-44477368 | Msa0293550:intron | 40.0% |
| AAGGAAAAGCTGCTGTCAAA+AGG | + | chr2_3:44477511-44477530 | None:intergenic | 40.0% | |
| TTCACCAAGATTGGCAAACT+GGG | + | chr2_3:44477714-44477733 | None:intergenic | 40.0% | |
| TTTCACCAAGATTGGCAAAC+TGG | + | chr2_3:44477715-44477734 | None:intergenic | 40.0% | |
| TGGTGCTTCATTTCAAGAGA+AGG | - | chr2_3:44477742-44477761 | Msa0293550:intron | 40.0% | |
| GCTTCATTTCAAGAGAAGGA+AGG | - | chr2_3:44477746-44477765 | Msa0293550:intron | 40.0% | |
| AAGAGAAGGAAGGATTTCGA+TGG | - | chr2_3:44477756-44477775 | Msa0293550:intron | 40.0% | |
| AGAGAAGGAAGGATTTCGAT+GGG | - | chr2_3:44477757-44477776 | Msa0293550:intron | 40.0% | |
| ATTGGCTACATCAGACATGT+TGG | + | chr2_3:44477834-44477853 | None:intergenic | 40.0% | |
| CACAAGCAGACAGCTTAAAT+TGG | + | chr2_3:44477852-44477871 | None:intergenic | 40.0% | |
| ! | AAGCTGTCTGCTTGTGTTTT+AGG | - | chr2_3:44477856-44477875 | Msa0293550:intron | 40.0% |
| CGGTGAGCTTGACAAAATTA+CGG | - | chr2_3:44478032-44478051 | Msa0293550:intron | 40.0% | |
| GCTTGACAAAATTACGGTGT+CGG | - | chr2_3:44478038-44478057 | Msa0293550:intron | 40.0% | |
| ! | CACCCTGATTTTGTTAAAGC+TGG | + | chr2_3:44478089-44478108 | None:intergenic | 40.0% |
| ! | CAGCTTTAACAAAATCAGGG+TGG | - | chr2_3:44478087-44478106 | Msa0293550:intron | 40.0% |
| !!! | CATTGTCCGTTTTGGAATGA+CGG | + | chr2_3:44478135-44478154 | None:intergenic | 40.0% |
| GTCTCTTGTGTTGAAAGCAA+TGG | - | chr2_3:44478511-44478530 | Msa0293550:CDS | 40.0% | |
| !!! | GAGTTTTGGAGAGAGCGAAT+AGG | + | chr2_3:44470952-44470971 | None:intergenic | 45.0% |
| AGATGTTGTTGGAGGAGCTA+TGG | - | chr2_3:44471064-44471083 | Msa0293550:three_prime_UTR | 45.0% | |
| ! | GTTACTGGGTTGTCGTTTGA+AGG | - | chr2_3:44471170-44471189 | Msa0293550:three_prime_UTR | 45.0% |
| ! | ACTCTTACTTGGCGTGCTTT+TGG | - | chr2_3:44471218-44471237 | Msa0293550:exon | 45.0% |
| TGAAATTGGGGAAATGGGTG+TGG | - | chr2_3:44471391-44471410 | Msa0293550:intron | 45.0% | |
| ! | GGAAATGGGTGTGGAGATTT+TGG | - | chr2_3:44471400-44471419 | Msa0293550:intron | 45.0% |
| GGCACAGAAAATGGAACAAG+GGG | - | chr2_3:44471974-44471993 | Msa0293550:intron | 45.0% | |
| GGGGTTGCTGAGAAAAGAAA+AGG | - | chr2_3:44471993-44472012 | Msa0293550:intron | 45.0% | |
| ! | TGAGACTGTGTCACTCAACT+TGG | + | chr2_3:44472150-44472169 | None:intergenic | 45.0% |
| GACACAGTCTCAAGTGAGAT+CGG | - | chr2_3:44472158-44472177 | Msa0293550:intron | 45.0% | |
| AGTGAGATCGGCAAAGCATA+TGG | - | chr2_3:44472170-44472189 | Msa0293550:intron | 45.0% | |
| GTACCTGGACATTAAGCACA+CGG | + | chr2_3:44472431-44472450 | None:intergenic | 45.0% | |
| GAATGACGTAACTAGGTACC+TGG | + | chr2_3:44472446-44472465 | None:intergenic | 45.0% | |
| ! | GTAGTTCCAAGAGGTACAGA+AGG | - | chr2_3:44472469-44472488 | Msa0293550:intron | 45.0% |
| ! | AGTTCCAAGAGGTACAGAAG+GGG | - | chr2_3:44472471-44472490 | Msa0293550:intron | 45.0% |
| ! | GGTTAGTGTTGAAGGAACCT+TGG | - | chr2_3:44472495-44472514 | Msa0293550:intron | 45.0% |
| GCCCAGAAGAAAACTGACAA+AGG | + | chr2_3:44472548-44472567 | None:intergenic | 45.0% | |
| GTTTATGGGATTACTGTGGG+TGG | - | chr2_3:44472601-44472620 | Msa0293550:intron | 45.0% | |
| ATTACTGTGGGTGGGAAGAA+TGG | - | chr2_3:44472610-44472629 | Msa0293550:intron | 45.0% | |
| TGGACAGTGGAAACCTCTTA+AGG | - | chr2_3:44473042-44473061 | Msa0293550:intron | 45.0% | |
| ACCTCTTAAGGATCTTTGGC+TGG | - | chr2_3:44473054-44473073 | Msa0293550:intron | 45.0% | |
| ACCAGCCAAAGATCCTTAAG+AGG | + | chr2_3:44473058-44473077 | None:intergenic | 45.0% | |
| CTTTGCAGCTCAAATCCCTA+AGG | + | chr2_3:44473098-44473117 | None:intergenic | 45.0% | |
| AGGGATTTGAGCTGCAAAGT+AGG | - | chr2_3:44473099-44473118 | Msa0293550:intron | 45.0% | |
| GGGATTTGAGCTGCAAAGTA+GGG | - | chr2_3:44473100-44473119 | Msa0293550:intron | 45.0% | |
| AACTTTGCAACTATCTGCGC+AGG | + | chr2_3:44473158-44473177 | None:intergenic | 45.0% | |
| TGCGCAGATAGTTGCAAAGT+TGG | - | chr2_3:44473157-44473176 | Msa0293550:intron | 45.0% | |
| GCGCAGATAGTTGCAAAGTT+GGG | - | chr2_3:44473158-44473177 | Msa0293550:intron | 45.0% | |
| CAGATAGTTGCAAAGTTGGG+TGG | - | chr2_3:44473161-44473180 | Msa0293550:intron | 45.0% | |
| !! | CTGCGAAATTAAGTGCTGAC+AGG | - | chr2_3:44473219-44473238 | Msa0293550:intron | 45.0% |
| AGAGTAAGGATTTGTGCGGT+GGG | - | chr2_3:44473250-44473269 | Msa0293550:intron | 45.0% | |
| GTGTGCGTTTGCGTTTGTAT+GGG | - | chr2_3:44473272-44473291 | Msa0293550:intron | 45.0% | |
| TGTGCGTTTGCGTTTGTATG+GGG | - | chr2_3:44473273-44473292 | Msa0293550:intron | 45.0% | |
| TTTGCGTTTGTATGGGGGTT+GGG | - | chr2_3:44473279-44473298 | Msa0293550:intron | 45.0% | |
| AAGTCTGTACCCCTTATAGC+TGG | + | chr2_3:44473558-44473577 | None:intergenic | 45.0% | |
| TCCACGACCACAACTAAGTA+AGG | - | chr2_3:44473997-44474016 | Msa0293550:intron | 45.0% | |
| TCCTTACTTAGTTGTGGTCG+TGG | + | chr2_3:44474001-44474020 | None:intergenic | 45.0% | |
| AGTAAGGAGATGGAGGTTTG+TGG | - | chr2_3:44474013-44474032 | Msa0293550:intron | 45.0% | |
| GTAAGGAGATGGAGGTTTGT+GGG | - | chr2_3:44474014-44474033 | Msa0293550:intron | 45.0% | |
| CTATAACCGGTCAGCATCAA+TGG | - | chr2_3:44474224-44474243 | Msa0293550:intron | 45.0% | |
| TATGGACCATTGATGCTGAC+CGG | + | chr2_3:44474233-44474252 | None:intergenic | 45.0% | |
| TGGTATAGACTTGACCATCC+TGG | - | chr2_3:44475299-44475318 | Msa0293550:intron | 45.0% | |
| CAGTTTAGTATCGTCTGGTC+TGG | + | chr2_3:44475340-44475359 | None:intergenic | 45.0% | |
| GACCAAACTAAACCAGGTTG+TGG | - | chr2_3:44475472-44475491 | Msa0293550:intron | 45.0% | |
| GCAACCAATCCCTCTAGATT+AGG | + | chr2_3:44475570-44475589 | None:intergenic | 45.0% | |
| GTTATGATCCATGGCTACTG+TGG | - | chr2_3:44475724-44475743 | Msa0293550:intron | 45.0% | |
| ! | ATTTTCTCCCACAGTAGCCA+TGG | + | chr2_3:44475735-44475754 | None:intergenic | 45.0% |
| GCCCTTCAACGATATTCTTG+AGG | + | chr2_3:44475913-44475932 | None:intergenic | 45.0% | |
| AAGCCCGAGTAGAATTCTCT+CGG | - | chr2_3:44476037-44476056 | Msa0293550:intron | 45.0% | |
| ACACCGAGAGAATTCTACTC+GGG | + | chr2_3:44476043-44476062 | None:intergenic | 45.0% | |
| GACACCGAGAGAATTCTACT+CGG | + | chr2_3:44476044-44476063 | None:intergenic | 45.0% | |
| TGCTTCTTCCCACTTTAACG+CGG | - | chr2_3:44476177-44476196 | Msa0293550:intron | 45.0% | |
| GGTCATGGAAAAGGTTCATG+TGG | - | chr2_3:44476221-44476240 | Msa0293550:intron | 45.0% | |
| AAAGGTTCATGTGGTTGCAG+TGG | - | chr2_3:44476230-44476249 | Msa0293550:intron | 45.0% | |
| ! | GGAACGTTTTGCTGATCAAG+AGG | - | chr2_3:44476251-44476270 | Msa0293550:intron | 45.0% |
| ! | TGCTGATCAAGAGGTACAAG+AGG | - | chr2_3:44476260-44476279 | Msa0293550:intron | 45.0% |
| AATTAGGGTCACACGATGAC+AGG | + | chr2_3:44476340-44476359 | None:intergenic | 45.0% | |
| AGTCGGAACTGTAACATAGG+GGG | - | chr2_3:44476748-44476767 | Msa0293550:intron | 45.0% | |
| TGCCAGTTCAATCTCTGATC+TGG | + | chr2_3:44476889-44476908 | None:intergenic | 45.0% | |
| ! | ATTTGTTGAACCTGCCGGTT+TGG | - | chr2_3:44477354-44477373 | Msa0293550:intron | 45.0% |
| AAAAACAAGACCAAACCGGC+AGG | + | chr2_3:44477367-44477386 | None:intergenic | 45.0% | |
| AACACGCCGTCATTCCAAAA+CGG | - | chr2_3:44478126-44478145 | Msa0293550:intron | 45.0% | |
| CGTCATTCCAAAACGGACAA+TGG | - | chr2_3:44478133-44478152 | Msa0293550:intron | 45.0% | |
| !!! | ATTTTATTATTTAATTTCTA+GGG | + | chr2_3:44472768-44472787 | None:intergenic | 5.0% |
| !!! | AATTTTATTATTTAATTTCT+AGG | + | chr2_3:44472769-44472788 | None:intergenic | 5.0% |
| !!! | TTTTATAATTTTATTTAAGA+TGG | - | chr2_3:44473022-44473041 | Msa0293550:intron | 5.0% |
| !! | TGAATATAAAAATATTAAAT+TGG | - | chr2_3:44474201-44474220 | Msa0293550:intron | 5.0% |
| !!! | ATTTTTTTTAATAGAAAAAT+GGG | - | chr2_3:44474893-44474912 | Msa0293550:intron | 5.0% |
| TGTGATGTTGGAAGAGGCGA+GGG | + | chr2_3:44470920-44470939 | None:intergenic | 50.0% | |
| TTGTGATGTTGGAAGAGGCG+AGG | + | chr2_3:44470921-44470940 | None:intergenic | 50.0% | |
| AAAGAAGATTGCCACGTGGC+AGG | + | chr2_3:44471107-44471126 | None:intergenic | 50.0% | |
| ! | CTTACTTGGCGTGCTTTTGG+TGG | - | chr2_3:44471221-44471240 | Msa0293550:CDS | 50.0% |
| TTGTTTGTGGGGTGTGGGAT+TGG | - | chr2_3:44471695-44471714 | Msa0293550:intron | 50.0% | |
| AGAAAAGGAAGAAGGGGTCC+AGG | - | chr2_3:44472008-44472027 | Msa0293550:intron | 50.0% | |
| GAAAAGGAAGAAGGGGTCCA+GGG | - | chr2_3:44472009-44472028 | Msa0293550:intron | 50.0% | |
| CTGGATCCAATAACACTCCC+TGG | + | chr2_3:44472029-44472048 | None:intergenic | 50.0% | |
| GTTATTGGATCCAGTGCTGC+CGG | - | chr2_3:44472035-44472054 | Msa0293550:intron | 50.0% | |
| ! | GAGGAAAGCACAAACGCAAC+CGG | + | chr2_3:44472057-44472076 | None:intergenic | 50.0% |
| !! | GAGCGGCTTTTTCTCAGCTT+TGG | - | chr2_3:44472096-44472115 | Msa0293550:intron | 50.0% |
| GGTAAACTAGGGGACATCGA+AGG | + | chr2_3:44472243-44472262 | None:intergenic | 50.0% | |
| GTTCCGTGTGCTTAATGTCC+AGG | - | chr2_3:44472425-44472444 | Msa0293550:intron | 50.0% | |
| ! | AGTGTTGAAGGAACCTTGGC+TGG | - | chr2_3:44472499-44472518 | Msa0293550:intron | 50.0% |
| ! | TGTCAGTTTTCTTCTGGGCG+AGG | - | chr2_3:44472549-44472568 | Msa0293550:intron | 50.0% |
| CAGAGTAAGGATTTGTGCGG+TGG | - | chr2_3:44473249-44473268 | Msa0293550:intron | 50.0% | |
| GGTGTGCGTTTGCGTTTGTA+TGG | - | chr2_3:44473271-44473290 | Msa0293550:intron | 50.0% | |
| GTGCGTTTGCGTTTGTATGG+GGG | - | chr2_3:44473274-44473293 | Msa0293550:intron | 50.0% | |
| GTTTGCGTTTGTATGGGGGT+TGG | - | chr2_3:44473278-44473297 | Msa0293550:intron | 50.0% | |
| GGGTACAGACTTTGTAGGAC+CGG | - | chr2_3:44473566-44473585 | Msa0293550:intron | 50.0% | |
| ! | TGTGTTGGTACTAGCTGCGA+TGG | - | chr2_3:44473856-44473875 | Msa0293550:intron | 50.0% |
| TCTATAAAAAGCCTCCGCCC+TGG | - | chr2_3:44475127-44475146 | Msa0293550:intron | 50.0% | |
| CTGATAACACTGATCCAGGG+CGG | + | chr2_3:44475144-44475163 | None:intergenic | 50.0% | |
| TGGTCTGGTCAGCTCTTGTT+CGG | + | chr2_3:44475325-44475344 | None:intergenic | 50.0% | |
| AGAGCAAACTGAACTGAGCC+AGG | - | chr2_3:44475412-44475431 | Msa0293550:intron | 50.0% | |
| GCCCACAACCTGGTTTAGTT+TGG | + | chr2_3:44475477-44475496 | None:intergenic | 50.0% | |
| !! | ATCTGATTTGGCCCACAACC+TGG | + | chr2_3:44475487-44475506 | None:intergenic | 50.0% |
| TCCATGTATTGCCAAGCTGC+AGG | + | chr2_3:44476410-44476429 | None:intergenic | 50.0% | |
| GCAGCTTGGCAATACATGGA+AGG | - | chr2_3:44476410-44476429 | Msa0293550:intron | 50.0% | |
| TTGTGGGAGGTTCAACTCAC+TGG | + | chr2_3:44477287-44477306 | None:intergenic | 50.0% | |
| TCCAATCATCACCTGCCACG+TGG | - | chr2_3:44471093-44471112 | Msa0293550:three_prime_UTR | 55.0% | |
| !!! | TGGCGTGCTTTTGGTGGTGA+TGG | - | chr2_3:44471227-44471246 | Msa0293550:CDS | 55.0% |
| !! | AGGGGTCCAGGGAGTGTTAT+TGG | - | chr2_3:44472020-44472039 | Msa0293550:intron | 55.0% |
| ! | TCCAAGAGGTACAGAAGGGG+CGG | - | chr2_3:44472474-44472493 | Msa0293550:intron | 55.0% |
| ! | GAAGGGGCGGTTAGTGTTGA+AGG | - | chr2_3:44472487-44472506 | Msa0293550:intron | 55.0% |
| GGTTTCATGGGTGTGGTTCC+TGG | + | chr2_3:44474069-44474088 | None:intergenic | 55.0% | |
| ATAACACTGATCCAGGGCGG+AGG | + | chr2_3:44475141-44475160 | None:intergenic | 55.0% | |
| GTCACACGATGACAGGACAC+AGG | + | chr2_3:44476333-44476352 | None:intergenic | 55.0% | |
| CACCATTTCAGCCTGCAGCT+TGG | - | chr2_3:44476396-44476415 | Msa0293550:intron | 55.0% | |
| TGCCAAGCTGCAGGCTGAAA+TGG | + | chr2_3:44476401-44476420 | None:intergenic | 55.0% | |
| GCCTGCAGCTTGGCAATACA+TGG | - | chr2_3:44476406-44476425 | Msa0293550:intron | 55.0% | |
| CAAGCAGTAGAGCTGAGCTG+AGG | - | chr2_3:44476501-44476520 | Msa0293550:intron | 55.0% | |
| GATTGGCAAACTGGGCAGCT+AGG | + | chr2_3:44477706-44477725 | None:intergenic | 55.0% | |
| GCTGCCCAGTTTGCCAATCT+TGG | - | chr2_3:44477707-44477726 | Msa0293550:intron | 55.0% | |
| GCCACGTGGCAGGTGATGAT+TGG | + | chr2_3:44471097-44471116 | None:intergenic | 60.0% | |
| ACAAACGCAACCGGCAGCAC+TGG | + | chr2_3:44472048-44472067 | None:intergenic | 60.0% | |
| ACCGCCCCTTCTGTACCTCT+TGG | + | chr2_3:44472478-44472497 | None:intergenic | 60.0% | |
| CAGCTCTTGTTCGGCCAGGA+TGG | + | chr2_3:44475316-44475335 | None:intergenic | 60.0% | |
| TGGTCAGCTCTTGTTCGGCC+AGG | + | chr2_3:44475320-44475339 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 44470885 | 44478727 | 44470885 | ID=Msa0293550;Name=Msa0293550 |
| chr2_3 | mRNA | 44470885 | 44478727 | 44470885 | ID=Msa0293550-mRNA-1;Parent=Msa0293550;Name=Msa0293550-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.6|0.5|1|0.6|0.83|6|336|278 |
| chr2_3 | exon | 44470885 | 44471313 | 44470885 | ID=Msa0293550-mRNA-1:exon:14005;Parent=Msa0293550-mRNA-1 |
| chr2_3 | exon | 44471834 | 44471938 | 44471834 | ID=Msa0293550-mRNA-1:exon:14004;Parent=Msa0293550-mRNA-1 |
| chr2_3 | exon | 44477042 | 44477165 | 44477042 | ID=Msa0293550-mRNA-1:exon:14003;Parent=Msa0293550-mRNA-1 |
| chr2_3 | exon | 44477486 | 44477664 | 44477486 | ID=Msa0293550-mRNA-1:exon:14002;Parent=Msa0293550-mRNA-1 |
| chr2_3 | exon | 44478332 | 44478420 | 44478332 | ID=Msa0293550-mRNA-1:exon:14001;Parent=Msa0293550-mRNA-1 |
| chr2_3 | exon | 44478481 | 44478727 | 44478481 | ID=Msa0293550-mRNA-1:exon:14000;Parent=Msa0293550-mRNA-1 |
| chr2_3 | CDS | 44478481 | 44478727 | 44478481 | ID=Msa0293550-mRNA-1:cds;Parent=Msa0293550-mRNA-1 |
| chr2_3 | CDS | 44478332 | 44478420 | 44478332 | ID=Msa0293550-mRNA-1:cds;Parent=Msa0293550-mRNA-1 |
| chr2_3 | CDS | 44477486 | 44477664 | 44477486 | ID=Msa0293550-mRNA-1:cds;Parent=Msa0293550-mRNA-1 |
| chr2_3 | CDS | 44477042 | 44477165 | 44477042 | ID=Msa0293550-mRNA-1:cds;Parent=Msa0293550-mRNA-1 |
| chr2_3 | CDS | 44471834 | 44471938 | 44471834 | ID=Msa0293550-mRNA-1:cds;Parent=Msa0293550-mRNA-1 |
| chr2_3 | CDS | 44471221 | 44471313 | 44471221 | ID=Msa0293550-mRNA-1:cds;Parent=Msa0293550-mRNA-1 |
| chr2_3 | three_prime_UTR | 44470885 | 44471220 | 44470885 | ID=Msa0293550-mRNA-1:three_prime_utr;Parent=Msa0293550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
