Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332400 | XP_013464522.1 | 81.651 | 327 | 7 | 4 | 1 | 278 | 1 | 323 | 2.57e-169 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332400 | sp|Q9SYM0|VTE6_ARATH | 57.394 | 284 | 67 | 5 | 46 | 275 | 47 | 330 | 3.89e-98 | 294 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0293550 | Msa0332400 | 0.907666 | 3.960971e-81 | -8.615850e-47 |
| Msa0332400 | Msa0824910 | 0.804078 | 2.567464e-49 | -8.615850e-47 |
| Msa0332400 | Msa1453620 | 0.807462 | 4.996235e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332400 | MtrunA17_Chr2g0314681 | 81.651 | 327 | 7 | 4 | 1 | 278 | 1 | 323 | 2.36e-173 | 481 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332400 | AT1G78620.1 | 57.394 | 284 | 67 | 5 | 46 | 275 | 47 | 330 | 3.96e-99 | 294 |
| Msa0332400 | AT1G78620.2 | 55.631 | 293 | 67 | 6 | 46 | 275 | 47 | 339 | 5.43e-96 | 286 |
Find 67 sgRNAs with CRISPR-Local
Find 547 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAAATTGATTGTTCTTAA+TGG | 0.178049 | 2_4:+49463252 | Msa0332400:three_prime_UTR |
| GCGAAGAATGTGAGAGTTTA+AGG | 0.207032 | 2_4:-49455600 | None:intergenic |
| AGTCAAAATGGCACAGAAAA+TGG | 0.253977 | 2_4:+49456577 | Msa0332400:CDS |
| AGGGGTCCAGGGAGTGTTAT+TGG | 0.294469 | 2_4:+49456632 | Msa0332400:CDS |
| TGAGCTTACAATGATGAAAT+AGG | 0.314279 | 2_4:-49455879 | None:intergenic |
| AAATTTAGGGATGCAAGTTT+TGG | 0.335808 | 2_4:-49462983 | None:intergenic |
| AATCTTGGTGAAAGCATAAT+TGG | 0.340647 | 2_4:+49462332 | Msa0332400:CDS |
| ACTCTTACTTGGCGTGCTTT+TGG | 0.341574 | 2_4:+49455830 | Msa0332400:CDS |
| TTTCACCAAGATTGGCAAAC+TGG | 0.344722 | 2_4:-49462322 | None:intergenic |
| AATTATGCTTTCACCAAGAT+TGG | 0.346679 | 2_4:-49462330 | None:intergenic |
| GCTGCCCAGTTTGCCAATCT+TGG | 0.362062 | 2_4:+49462317 | Msa0332400:CDS |
| GTTGGTGTAAATGTGAGTTT+TGG | 0.381754 | 2_4:-49455575 | None:intergenic |
| AGGGTTTATGTTTGTGATGT+TGG | 0.393863 | 2_4:-49455541 | None:intergenic |
| AGCTGCAACAAAAGTCAAAA+TGG | 0.399751 | 2_4:+49456565 | Msa0332400:CDS |
| AGAAAAGGAAGAAGGGGTCC+AGG | 0.424572 | 2_4:+49456620 | Msa0332400:CDS |
| CAACATCATCAACATATCAA+TGG | 0.443415 | 2_4:+49462926 | Msa0332400:CDS |
| AGTTTGTGTTACTGTAATCA+AGG | 0.453998 | 2_4:+49463205 | Msa0332400:three_prime_UTR |
| ATGTGAGAGTTTAAGGTTGT+TGG | 0.459491 | 2_4:-49455593 | None:intergenic |
| TTTCTCAGCTTTGGAGACTT+GGG | 0.460386 | 2_4:+49456717 | Msa0332400:CDS |
| GAAGGGGCGGTTAGTGTTGA+AGG | 0.469316 | 2_4:+49457099 | Msa0332400:CDS |
| TTCACCAAGATTGGCAAACT+GGG | 0.473229 | 2_4:-49462321 | None:intergenic |
| AACATCATCAACATATCAAT+GGG | 0.473319 | 2_4:+49462927 | Msa0332400:CDS |
| CTGAGAAAAGAAAAGGAAGA+AGG | 0.478719 | 2_4:+49456612 | Msa0332400:CDS |
| AGTGTTGAAGGAACCTTGGC+TGG | 0.481616 | 2_4:+49457111 | Msa0332400:CDS |
| CTACCTTGAATGACGTAACT+AGG | 0.481900 | 2_4:-49457062 | None:intergenic |
| GCCACGTGGCAGGTGATGAT+TGG | 0.484057 | 2_4:-49455706 | None:intergenic |
| GTCTACATTTATACAAGAAA+AGG | 0.486174 | 2_4:-49463171 | None:intergenic |
| ACCGCCCCTTCTGTACCTCT+TGG | 0.489864 | 2_4:-49457087 | None:intergenic |
| ACAAACGCAACCGGCAGCAC+TGG | 0.490906 | 2_4:-49456657 | None:intergenic |
| AAATTGATTGTTCTTAATGG+TGG | 0.494574 | 2_4:+49463255 | Msa0332400:three_prime_UTR |
| GAGGAAAGCACAAACGCAAC+CGG | 0.496460 | 2_4:-49456666 | None:intergenic |
| AAAGAAGATTGCCACGTGGC+AGG | 0.496879 | 2_4:-49455716 | None:intergenic |
| AGTAAGACACTTCAACATCT+AGG | 0.497206 | 2_4:-49463081 | None:intergenic |
| AGATGTTGTTGGAGGAGCTA+TGG | 0.519266 | 2_4:+49455676 | Msa0332400:CDS |
| GATTGGCAAACTGGGCAGCT+AGG | 0.519301 | 2_4:-49462313 | None:intergenic |
| GTCTCTTGTGTTGAAAGCAA+TGG | 0.522323 | 2_4:+49463121 | Msa0332400:three_prime_UTR |
| GTAGTTCCAAGAGGTACAGA+AGG | 0.531342 | 2_4:+49457081 | Msa0332400:CDS |
| TCGAGTGTTCAAGATGTTGT+TGG | 0.532110 | 2_4:+49455665 | Msa0332400:CDS |
| GTACCTAGTTACGTCATTCA+AGG | 0.536903 | 2_4:+49457059 | Msa0332400:CDS |
| TGGTGCTTCATTTCAAGAGA+AGG | 0.538249 | 2_4:+49462352 | Msa0332400:CDS |
| CTGGATCCAATAACACTCCC+TGG | 0.539129 | 2_4:-49456638 | None:intergenic |
| ATTGCATCATGTTGTTGTTG+AGG | 0.541558 | 2_4:-49455631 | None:intergenic |
| TATGTTTGTGATGTTGGAAG+AGG | 0.543364 | 2_4:-49455535 | None:intergenic |
| GGGGTTGCTGAGAAAAGAAA+AGG | 0.555747 | 2_4:+49456605 | Msa0332400:CDS |
| GAAAAGGAAGAAGGGGTCCA+GGG | 0.558281 | 2_4:+49456621 | Msa0332400:CDS |
| GTTATTGGATCCAGTGCTGC+CGG | 0.567050 | 2_4:+49456647 | Msa0332400:CDS |
| AGTGTTCAAGATGTTGTTGG+AGG | 0.567276 | 2_4:+49455668 | Msa0332400:CDS |
| AAGAGAAGGAAGGATTTCGA+TGG | 0.569598 | 2_4:+49462366 | Msa0332400:CDS |
| TGAGAAAAGAAAAGGAAGAA+GGG | 0.576058 | 2_4:+49456613 | Msa0332400:CDS |
| GGTTAGTGTTGAAGGAACCT+TGG | 0.579465 | 2_4:+49457107 | Msa0332400:CDS |
| AGATGCTAAAATTCCAGCCA+AGG | 0.586125 | 2_4:-49457124 | None:intergenic |
| GCTTCATTTCAAGAGAAGGA+AGG | 0.588184 | 2_4:+49462356 | Msa0332400:CDS |
| TGTGATGTTGGAAGAGGCGA+GGG | 0.590477 | 2_4:-49455529 | None:intergenic |
| GGCACAGAAAATGGAACAAG+GGG | 0.597382 | 2_4:+49456586 | Msa0332400:CDS |
| TAGTTCCAAGAGGTACAGAA+GGG | 0.598143 | 2_4:+49457082 | Msa0332400:CDS |
| AGAGAAGGAAGGATTTCGAT+GGG | 0.605161 | 2_4:+49462367 | Msa0332400:CDS |
| ATGGCACAGAAAATGGAACA+AGG | 0.629097 | 2_4:+49456584 | Msa0332400:CDS |
| TTGTGATGTTGGAAGAGGCG+AGG | 0.631395 | 2_4:-49455530 | None:intergenic |
| GAGAAAAGAAAAGGAAGAAG+GGG | 0.634746 | 2_4:+49456614 | Msa0332400:CDS |
| TCCAAGAGGTACAGAAGGGG+CGG | 0.638566 | 2_4:+49457086 | Msa0332400:CDS |
| GCCCAGAAGAAAACTGACAA+AGG | 0.643507 | 2_4:-49457157 | None:intergenic |
| TGGCACAGAAAATGGAACAA+GGG | 0.644509 | 2_4:+49456585 | Msa0332400:CDS |
| GCTTGCAAGTTGCAATGCAG+AGG | 0.647091 | 2_4:+49463318 | Msa0332400:three_prime_UTR |
| AGTTCCAAGAGGTACAGAAG+GGG | 0.678598 | 2_4:+49457083 | Msa0332400:CDS |
| TCCAATCATCACCTGCCACG+TGG | 0.687047 | 2_4:+49455705 | Msa0332400:CDS |
| TCATTCAAGGTAGTTCCAAG+AGG | 0.702321 | 2_4:+49457072 | Msa0332400:CDS |
| TAACAAAGAAGATTGCCACG+TGG | 0.833811 | 2_4:-49455720 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTAATTATTTTTAAAA+TGG | + | chr2_4:49458095-49458114 | Msa0332400:intron | 0.0% |
| !!! | AAATTAATTATTTTTAAAAT+GGG | + | chr2_4:49458096-49458115 | Msa0332400:intron | 0.0% |
| !!! | TTAATATATAAATTTTAAAA+CGG | - | chr2_4:49458903-49458922 | None:intergenic | 0.0% |
| !!! | TGTTAATTAATATGATATTT+TGG | + | chr2_4:49457925-49457944 | Msa0332400:intron | 10.0% |
| !! | TTCCTATAAAAATAAAATAA+AGG | + | chr2_4:49459159-49459178 | Msa0332400:intron | 10.0% |
| !! | TAAAATGTAAATTAAATTCA+GGG | + | chr2_4:49459273-49459292 | Msa0332400:intron | 10.0% |
| !!! | AATTTTGAATTTGAAATTTA+AGG | + | chr2_4:49459312-49459331 | Msa0332400:intron | 10.0% |
| !! | TTGAAAAAAATTCAATATTT+AGG | + | chr2_4:49459344-49459363 | Msa0332400:intron | 10.0% |
| !!! | CATTTTTTTAATAGAAAAAT+GGG | + | chr2_4:49459503-49459522 | Msa0332400:intron | 10.0% |
| !! | AAAAAATGTATTAAAAAAGT+AGG | + | chr2_4:49461569-49461588 | Msa0332400:intron | 10.0% |
| !! | AAAAATGTATTAAAAAAGTA+GGG | + | chr2_4:49461570-49461589 | Msa0332400:intron | 10.0% |
| !!! | TTGAAAAATTTGATTTTTGT+TGG | + | chr2_4:49455973-49455992 | Msa0332400:intron | 15.0% |
| !!! | TTTCTTATTTTATGAAATTC+TGG | + | chr2_4:49456353-49456372 | Msa0332400:intron | 15.0% |
| !!! | ATATATTTTTAACAGAAACA+CGG | - | chr2_4:49457567-49457586 | None:intergenic | 15.0% |
| !! | AAATCTTAAATATAAACCTT+AGG | + | chr2_4:49457691-49457710 | Msa0332400:intron | 15.0% |
| !! | AATCTTAAATATAAACCTTA+GGG | + | chr2_4:49457692-49457711 | Msa0332400:intron | 15.0% |
| !!! | TAAAATTTTATTCTATTTGC+AGG | - | chr2_4:49458782-49458801 | None:intergenic | 15.0% |
| !!! | AGCCTTTATTTTATTTTTAT+AGG | - | chr2_4:49459164-49459183 | None:intergenic | 15.0% |
| !! | AATTGAACAAAAAATTTGTA+AGG | + | chr2_4:49459186-49459205 | Msa0332400:intron | 15.0% |
| !! | GTAAAATGTAAATTAAATTC+AGG | + | chr2_4:49459272-49459291 | Msa0332400:intron | 15.0% |
| !! | AAAAAAATTCAATATTTAGG+AGG | + | chr2_4:49459347-49459366 | Msa0332400:intron | 15.0% |
| !!! | AGATTTTGAATTTTGATTTA+AGG | + | chr2_4:49459380-49459399 | Msa0332400:intron | 15.0% |
| !!! | GCATTTTTTTAATAGAAAAA+TGG | + | chr2_4:49459502-49459521 | Msa0332400:intron | 15.0% |
| !! | TTGCCTTAAAAATATATTAT+TGG | + | chr2_4:49459641-49459660 | Msa0332400:intron | 15.0% |
| !! | TGCCTTAAAAATATATTATT+GGG | + | chr2_4:49459642-49459661 | Msa0332400:intron | 15.0% |
| !!! | TCAAAACAAATTAAATGTTT+TGG | + | chr2_4:49459694-49459713 | Msa0332400:intron | 15.0% |
| !!! | CAAAACAAATTAAATGTTTT+GGG | + | chr2_4:49459695-49459714 | Msa0332400:intron | 15.0% |
| !!! | AAAACAAATTAAATGTTTTG+GGG | + | chr2_4:49459696-49459715 | Msa0332400:intron | 15.0% |
| !! | ATATTATTCTTTATATGAAC+TGG | - | chr2_4:49461468-49461487 | None:intergenic | 15.0% |
| !! | CAAAACTGTAAATATTTATA+GGG | - | chr2_4:49461613-49461632 | None:intergenic | 15.0% |
| !! | ACAAAACTGTAAATATTTAT+AGG | - | chr2_4:49461614-49461633 | None:intergenic | 15.0% |
| !!! | AAAGTATGATTTTATTTTGT+AGG | + | chr2_4:49461800-49461819 | Msa0332400:intron | 15.0% |
| !!! | AAGTATGATTTTATTTTGTA+GGG | + | chr2_4:49461801-49461820 | Msa0332400:intron | 15.0% |
| !!! | GTTTTTTTCTTTACTTTTTT+CGG | - | chr2_4:49461875-49461894 | None:intergenic | 15.0% |
| !!! | TTCAATTTTATTTGAATTGT+GGG | - | chr2_4:49461913-49461932 | None:intergenic | 15.0% |
| !!! | CAGAAAATAATTAAGTTTTT+CGG | - | chr2_4:49462400-49462419 | None:intergenic | 15.0% |
| !! | TTGCAAAGATTGATTATTAA+TGG | + | chr2_4:49456221-49456240 | Msa0332400:intron | 20.0% |
| !!! | ATTTTGAATGTTTTGTTTGT+GGG | + | chr2_4:49456295-49456314 | Msa0332400:intron | 20.0% |
| !!! | AGTTTATCAATTTTCAGATA+AGG | - | chr2_4:49456333-49456352 | None:intergenic | 20.0% |
| !!! | ATTTTATGAAATTCTGGAAA+TGG | + | chr2_4:49456359-49456378 | Msa0332400:intron | 20.0% |
| !!! | TTTTATGAAATTCTGGAAAT+GGG | + | chr2_4:49456360-49456379 | Msa0332400:intron | 20.0% |
| !!! | ATGCAAATTTTCATTGTTTT+TGG | + | chr2_4:49456482-49456501 | Msa0332400:intron | 20.0% |
| !!! | TTGATATAAAAGTATAGTGT+CGG | + | chr2_4:49456958-49456977 | Msa0332400:intron | 20.0% |
| !!! | TGAATCTGAAATATGTTTAT+GGG | + | chr2_4:49457199-49457218 | Msa0332400:intron | 20.0% |
| !!! | GTGTTTCTGTTAAAAATATA+TGG | + | chr2_4:49457566-49457585 | Msa0332400:intron | 20.0% |
| !!! | GTATTTTATCTTTACTTTTG+AGG | + | chr2_4:49457950-49457969 | Msa0332400:intron | 20.0% |
| !! | AAAAATTCCTTGATGTTATT+GGG | - | chr2_4:49458055-49458074 | None:intergenic | 20.0% |
| !! | AAAAAATTCCTTGATGTTAT+TGG | - | chr2_4:49458056-49458075 | None:intergenic | 20.0% |
| !! | AGTTTATCTAGATACATAAA+TGG | + | chr2_4:49458301-49458320 | Msa0332400:intron | 20.0% |
| !!! | TTAAAGTTGAGATTTTTCAA+AGG | + | chr2_4:49458496-49458515 | Msa0332400:intron | 20.0% |
| !!! | TAAAGTTGAGATTTTTCAAA+GGG | + | chr2_4:49458497-49458516 | Msa0332400:intron | 20.0% |
| !! | AATATTAAATTGGCTATAAC+CGG | + | chr2_4:49458823-49458842 | Msa0332400:intron | 20.0% |
| !!! | AATTTGAAATTTAAGGAAGA+AGG | + | chr2_4:49459319-49459338 | Msa0332400:intron | 20.0% |
| !! | TTAATAGAAAAATGGGAAAA+AGG | + | chr2_4:49459510-49459529 | Msa0332400:intron | 20.0% |
| !!! | TTATTTTTTTTGTCCCATTT+AGG | - | chr2_4:49459568-49459587 | None:intergenic | 20.0% |
| !! | GGGACAAAAAAAATAAATAA+AGG | + | chr2_4:49459572-49459591 | Msa0332400:intron | 20.0% |
| !! | GTTACAACTAAATAAGATAA+AGG | + | chr2_4:49459603-49459622 | Msa0332400:intron | 20.0% |
| !! | GCCTTAAAAATATATTATTG+GGG | + | chr2_4:49459643-49459662 | Msa0332400:intron | 20.0% |
| !!! | ACCCCAATAATATATTTTTA+AGG | - | chr2_4:49459647-49459666 | None:intergenic | 20.0% |
| !! | ATTAGAAGATAAATCCAAAT+AGG | - | chr2_4:49460299-49460318 | None:intergenic | 20.0% |
| !! | TTATCTTCTAATGAAATCAT+TGG | + | chr2_4:49460307-49460326 | Msa0332400:intron | 20.0% |
| !! | TTAAACTTCACTTTATACTT+CGG | + | chr2_4:49460810-49460829 | Msa0332400:intron | 20.0% |
| !! | TATAGATATTCCTATGAAAT+TGG | + | chr2_4:49461168-49461187 | Msa0332400:intron | 20.0% |
| !!! | ACTGTTATTTTTAGTTTGTA+GGG | + | chr2_4:49461214-49461233 | Msa0332400:intron | 20.0% |
| !!! | AAATGCGATTTTATTTTGTA+GGG | - | chr2_4:49461644-49461663 | None:intergenic | 20.0% |
| !!! | AAAATGCGATTTTATTTTGT+AGG | - | chr2_4:49461645-49461664 | None:intergenic | 20.0% |
| !!! | GCTGATGAAATTTTTTTATA+GGG | - | chr2_4:49461704-49461723 | None:intergenic | 20.0% |
| !!! | TGCTGATGAAATTTTTTTAT+AGG | - | chr2_4:49461705-49461724 | None:intergenic | 20.0% |
| !!! | AAAATTTCCATCAAGATTTT+TGG | + | chr2_4:49461740-49461759 | Msa0332400:intron | 20.0% |
| !!! | CATTTTTCTTAAGCATTTTA+AGG | - | chr2_4:49461767-49461786 | None:intergenic | 20.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | + | chr2_4:49461831-49461850 | Msa0332400:intron | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | + | chr2_4:49461832-49461851 | Msa0332400:intron | 20.0% |
| !!! | GTTCAATTTTATTTGAATTG+TGG | - | chr2_4:49461914-49461933 | None:intergenic | 20.0% |
| !!! | TGGATAGTGTTTTATAATTT+CGG | + | chr2_4:49462069-49462088 | Msa0332400:intron | 20.0% |
| !!! | TGTATAGTTTTTGCTTTTTA+TGG | + | chr2_4:49462192-49462211 | Msa0332400:intron | 20.0% |
| !! | ATAATTAAGAAGTAAATCAC+TGG | - | chr2_4:49462250-49462269 | None:intergenic | 20.0% |
| !!! | TTATTTGTTGTTAAACAGAT+TGG | + | chr2_4:49462266-49462285 | Msa0332400:intron | 20.0% |
| !! | TGTCATATATCACAAATTAT+AGG | - | chr2_4:49462527-49462546 | None:intergenic | 20.0% |
| !! | TAACGTTAAAACAATAATTC+TGG | + | chr2_4:49462774-49462793 | Msa0332400:intron | 20.0% |
| !! | AACGTTAAAACAATAATTCT+GGG | + | chr2_4:49462775-49462794 | Msa0332400:intron | 20.0% |
| !!! | AAAATTTTGCAGCAAATTTA+GGG | - | chr2_4:49462999-49463018 | None:intergenic | 20.0% |
| !! | TAGAAATTGATTGTTCTTAA+TGG | + | chr2_4:49463252-49463271 | Msa0332400:three_prime_UTR | 20.0% |
| !!! | TAATTTGTTGATCTTTGTGT+TGG | + | chr2_4:49455745-49455764 | Msa0332400:intron | 25.0% |
| !!! | AATTTGTTGATCTTTGTGTT+GGG | + | chr2_4:49455746-49455765 | Msa0332400:intron | 25.0% |
| !!! | CTCAATTTTCGTTTTTTCTA+TGG | + | chr2_4:49455898-49455917 | Msa0332400:intron | 25.0% |
| !!! | GTTTCGTTTTTGTTTATGAT+TGG | + | chr2_4:49455920-49455939 | Msa0332400:intron | 25.0% |
| !!! | GTGCAAAATTTGATTTTTGT+TGG | + | chr2_4:49456097-49456116 | Msa0332400:intron | 25.0% |
| ! | ATTTGTGAAATTTGGGAAAT+GGG | + | chr2_4:49456122-49456141 | Msa0332400:intron | 25.0% |
| !! | TTACGTGAAATTCTGAAAAT+GGG | + | chr2_4:49456246-49456265 | Msa0332400:intron | 25.0% |
| !!! | GATTTTGAATGTTTTGTTTG+TGG | + | chr2_4:49456294-49456313 | Msa0332400:intron | 25.0% |
| !!! | TTTTGAATGTTTTGTTTGTG+GGG | + | chr2_4:49456296-49456315 | Msa0332400:intron | 25.0% |
| !!! | TTTTGTGGAATTTGTTATTC+TGG | + | chr2_4:49456392-49456411 | Msa0332400:intron | 25.0% |
| !!! | GAATTTGTTATTCTGGAATT+GGG | + | chr2_4:49456399-49456418 | Msa0332400:intron | 25.0% |
| !!! | TTTTCATTGTTTTTGGTTCT+AGG | + | chr2_4:49456489-49456508 | Msa0332400:intron | 25.0% |
| !!! | TTTCATTGTTTTTGGTTCTA+GGG | + | chr2_4:49456490-49456509 | Msa0332400:intron | 25.0% |
| !! | CTGAATCTGAAATATGTTTA+TGG | + | chr2_4:49457198-49457217 | Msa0332400:intron | 25.0% |
| ! | TCAATGAAATCTCCAAATAA+AGG | - | chr2_4:49457275-49457294 | None:intergenic | 25.0% |
| !!! | AATACAGTTGGTAAAAGTAA+TGG | + | chr2_4:49457516-49457535 | Msa0332400:intron | 25.0% |
| !!! | ATTTTATTTAAGATGGACAG+TGG | + | chr2_4:49457641-49457660 | Msa0332400:intron | 25.0% |
| !!! | TTTACTTTTGAGGATCATAT+TGG | + | chr2_4:49457960-49457979 | Msa0332400:intron | 25.0% |
| ! | AAAATTCCTTGATGTTATTG+GGG | - | chr2_4:49458054-49458073 | None:intergenic | 25.0% |
| ! | TAAATTGAGGTCCATATTAA+GGG | - | chr2_4:49458124-49458143 | None:intergenic | 25.0% |
| ! | TTAAATTGAGGTCCATATTA+AGG | - | chr2_4:49458125-49458144 | None:intergenic | 25.0% |
| ! | TAATATGGACCTCAATTTAA+AGG | + | chr2_4:49458125-49458144 | Msa0332400:intron | 25.0% |
| ! | CAGAATTTGTATACACAAAA+TGG | - | chr2_4:49458207-49458226 | None:intergenic | 25.0% |
| ! | ATAAACTAGTTAATGTACAG+CGG | - | chr2_4:49458288-49458307 | None:intergenic | 25.0% |
| ! | ATTCAGATCTTTATGTGATT+TGG | - | chr2_4:49458331-49458350 | None:intergenic | 25.0% |
| !!! | AAAGTTGAGATTTTTCAAAG+GGG | + | chr2_4:49458498-49458517 | Msa0332400:intron | 25.0% |
| ! | AATGGTAGAAGAATTGTAAA+TGG | + | chr2_4:49458549-49458568 | Msa0332400:intron | 25.0% |
| ! | ATGGTAGAAGAATTGTAAAT+GGG | + | chr2_4:49458550-49458569 | Msa0332400:intron | 25.0% |
| ! | TAATATGGACCATATTGAAA+GGG | - | chr2_4:49458874-49458893 | None:intergenic | 25.0% |
| ! | TTTCAATATGGTCCATATTA+GGG | + | chr2_4:49458874-49458893 | Msa0332400:intron | 25.0% |
| ! | AGTTCAATAAAACTTATGCA+GGG | - | chr2_4:49458983-49459002 | None:intergenic | 25.0% |
| ! | AAGTTCAATAAAACTTATGC+AGG | - | chr2_4:49458984-49459003 | None:intergenic | 25.0% |
| ! | AGTTGAATAAAACTTATGCA+GGG | - | chr2_4:49459086-49459105 | None:intergenic | 25.0% |
| ! | AAGTTGAATAAAACTTATGC+AGG | - | chr2_4:49459087-49459106 | None:intergenic | 25.0% |
| ! | TTAACACAACTGAATCAATA+AGG | + | chr2_4:49459222-49459241 | Msa0332400:intron | 25.0% |
| !! | TGATAGATAAAGTACCTAAA+TGG | + | chr2_4:49459551-49459570 | Msa0332400:intron | 25.0% |
| !! | GATAGATAAAGTACCTAAAT+GGG | + | chr2_4:49459552-49459571 | Msa0332400:intron | 25.0% |
| ! | AATCAGGATAATATCTGATT+TGG | - | chr2_4:49460109-49460128 | None:intergenic | 25.0% |
| ! | AAATCAGATATTATCCTGAT+TGG | + | chr2_4:49460108-49460127 | Msa0332400:intron | 25.0% |
| ! | TATTATCCTGATTGGATTTA+TGG | + | chr2_4:49460116-49460135 | Msa0332400:intron | 25.0% |
| ! | ATTATCCTGATTGGATTTAT+GGG | + | chr2_4:49460117-49460136 | Msa0332400:intron | 25.0% |
| ! | AACTACAATATATATACGTG+TGG | - | chr2_4:49460202-49460221 | None:intergenic | 25.0% |
| !! | GTATGAAATCTGAAATTGTA+CGG | - | chr2_4:49460447-49460466 | None:intergenic | 25.0% |
| ! | ATTTCATCTTCCACTTAATT+TGG | + | chr2_4:49460697-49460716 | Msa0332400:intron | 25.0% |
| ! | TTTCATCTTCCACTTAATTT+GGG | + | chr2_4:49460698-49460717 | Msa0332400:intron | 25.0% |
| ! | ACTTGTAGCATACTTAATAT+TGG | - | chr2_4:49460908-49460927 | None:intergenic | 25.0% |
| ! | TATTAAGTATGCTACAAGTT+TGG | + | chr2_4:49460909-49460928 | Msa0332400:intron | 25.0% |
| ! | ATTAAGTATGCTACAAGTTT+GGG | + | chr2_4:49460910-49460929 | Msa0332400:intron | 25.0% |
| ! | ACTAGAGTTGAGTTAAATTA+GGG | - | chr2_4:49460965-49460984 | None:intergenic | 25.0% |
| ! | AACTAGAGTTGAGTTAAATT+AGG | - | chr2_4:49460966-49460985 | None:intergenic | 25.0% |
| !!! | CACTGTTATTTTTAGTTTGT+AGG | + | chr2_4:49461213-49461232 | Msa0332400:intron | 25.0% |
| ! | AATCAAAGGAATTTGTATCA+TGG | + | chr2_4:49461242-49461261 | Msa0332400:intron | 25.0% |
| ! | ACACATATCTATGTTTCAAT+AGG | + | chr2_4:49461301-49461320 | Msa0332400:intron | 25.0% |
| !!! | AATTTTATTTGAATTGTGGG+AGG | - | chr2_4:49461910-49461929 | None:intergenic | 25.0% |
| !!! | TTTTAAAAACAAGACCAAAC+CGG | - | chr2_4:49461981-49462000 | None:intergenic | 25.0% |
| !!! | TTGGTCTTGTTTTTAAAACA+TGG | + | chr2_4:49461983-49462002 | Msa0332400:intron | 25.0% |
| !!! | TGGTCTTGTTTTTAAAACAT+GGG | + | chr2_4:49461984-49462003 | Msa0332400:intron | 25.0% |
| ! | GTTATGGATTTAATTGTTCT+TGG | + | chr2_4:49462049-49462068 | Msa0332400:intron | 25.0% |
| ! | TTCAATAACTTCATTGTTGA+CGG | - | chr2_4:49462161-49462180 | None:intergenic | 25.0% |
| ! | AAGCAAAAACTATACAAGTA+AGG | - | chr2_4:49462188-49462207 | None:intergenic | 25.0% |
| ! | AACATCATCAACATATCAAT+GGG | + | chr2_4:49462927-49462946 | Msa0332400:CDS | 25.0% |
| !! | GAAAATTTTGCAGCAAATTT+AGG | - | chr2_4:49463000-49463019 | None:intergenic | 25.0% |
| !!! | AATTTGCTGCAAAATTTTCT+CGG | + | chr2_4:49463001-49463020 | Msa0332400:exon | 25.0% |
| ! | GTCTACATTTATACAAGAAA+AGG | - | chr2_4:49463174-49463193 | None:intergenic | 25.0% |
| !! | TAACACAAACTTTTCTTTCA+TGG | - | chr2_4:49463196-49463215 | None:intergenic | 25.0% |
| ! | AAATTGATTGTTCTTAATGG+TGG | + | chr2_4:49463255-49463274 | Msa0332400:three_prime_UTR | 25.0% |
| TGAGCTTACAATGATGAAAT+AGG | - | chr2_4:49455882-49455901 | None:intergenic | 30.0% | |
| !!! | TGGTTTGTTTGTTTTGAAAG+TGG | + | chr2_4:49455940-49455959 | Msa0332400:intron | 30.0% |
| !! | TTGTTGGAGTTTTGTGAAAT+TGG | + | chr2_4:49455989-49456008 | Msa0332400:intron | 30.0% |
| !! | TGTTGGAGTTTTGTGAAATT+GGG | + | chr2_4:49455990-49456009 | Msa0332400:intron | 30.0% |
| ! | TTTTGTGAAATTGGGGAAAT+GGG | + | chr2_4:49455998-49456017 | Msa0332400:intron | 30.0% |
| !!! | ATTTTGGTTGATTTGGTTTC+TGG | + | chr2_4:49456028-49456047 | Msa0332400:intron | 30.0% |
| !!! | TTTTGGTTGATTTGGTTTCT+GGG | + | chr2_4:49456029-49456048 | Msa0332400:intron | 30.0% |
| !! | TCTGGGTTTTGTAGAATTTT+TGG | + | chr2_4:49456046-49456065 | Msa0332400:intron | 30.0% |
| TGTTGGAGATTTGTGAAATT+TGG | + | chr2_4:49456114-49456133 | Msa0332400:intron | 30.0% | |
| GTTGGAGATTTGTGAAATTT+GGG | + | chr2_4:49456115-49456134 | Msa0332400:intron | 30.0% | |
| GATTTGTGAAATTTGGGAAA+TGG | + | chr2_4:49456121-49456140 | Msa0332400:intron | 30.0% | |
| !!! | TTTGGAGATTTTGGTTGATT+TGG | + | chr2_4:49456145-49456164 | Msa0332400:intron | 30.0% |
| !!! | ATTTTGGTTGATTTGGATTC+TGG | + | chr2_4:49456152-49456171 | Msa0332400:intron | 30.0% |
| !!! | TTTTGGTTGATTTGGATTCT+GGG | + | chr2_4:49456153-49456172 | Msa0332400:intron | 30.0% |
| ! | GTTACGTGAAATTCTGAAAA+TGG | + | chr2_4:49456245-49456264 | Msa0332400:intron | 30.0% |
| ! | TACGTGAAATTCTGAAAATG+GGG | + | chr2_4:49456247-49456266 | Msa0332400:intron | 30.0% |
| !! | GGAATTTGTTATTCTGGAAT+TGG | + | chr2_4:49456398-49456417 | Msa0332400:intron | 30.0% |
| !! | TGAAAGTGTTAAACTTCATC+AGG | + | chr2_4:49456435-49456454 | Msa0332400:intron | 30.0% |
| !!! | TTTTGTACTTTGGAGTTGAT+TGG | + | chr2_4:49456521-49456540 | Msa0332400:intron | 30.0% |
| TGAGAAAAGAAAAGGAAGAA+GGG | + | chr2_4:49456613-49456632 | Msa0332400:CDS | 30.0% | |
| ! | TATTGATAACAACACAGTGA+AGG | - | chr2_4:49456899-49456918 | None:intergenic | 30.0% |
| TATTTCAGATTCAGAGATCA+GGG | - | chr2_4:49457192-49457211 | None:intergenic | 30.0% | |
| ATATTTCAGATTCAGAGATC+AGG | - | chr2_4:49457193-49457212 | None:intergenic | 30.0% | |
| ATATGTTTATGGGATTACTG+TGG | + | chr2_4:49457209-49457228 | Msa0332400:intron | 30.0% | |
| TATGTTTATGGGATTACTGT+GGG | + | chr2_4:49457210-49457229 | Msa0332400:intron | 30.0% | |
| !! | AATGGATTAATGAGGTAATC+AGG | + | chr2_4:49457240-49457259 | Msa0332400:intron | 30.0% |
| GCAGAAATGTATCGTATATA+AGG | - | chr2_4:49457305-49457324 | None:intergenic | 30.0% | |
| ! | CGAGAAAATGCTTTATTAGT+GGG | + | chr2_4:49457324-49457343 | Msa0332400:intron | 30.0% |
| TCTGTTCATGATGATTGAAA+TGG | + | chr2_4:49457411-49457430 | Msa0332400:intron | 30.0% | |
| TTCATGATGATTGAAATGGT+AGG | + | chr2_4:49457415-49457434 | Msa0332400:intron | 30.0% | |
| AGGTAAGTAATGAATACAGT+TGG | + | chr2_4:49457504-49457523 | Msa0332400:intron | 30.0% | |
| !! | AGTTGGTAAAAGTAATGGAT+TGG | + | chr2_4:49457521-49457540 | Msa0332400:intron | 30.0% |
| !! | GTTGGTAAAAGTAATGGATT+GGG | + | chr2_4:49457522-49457541 | Msa0332400:intron | 30.0% |
| AAATTCCTTGATGTTATTGG+GGG | - | chr2_4:49458053-49458072 | None:intergenic | 30.0% | |
| AGGTTCAATCCTTTAAATTG+AGG | - | chr2_4:49458137-49458156 | None:intergenic | 30.0% | |
| TTATAGCTGGTAATTTACTG+AGG | - | chr2_4:49458157-49458176 | None:intergenic | 30.0% | |
| TCAGTAAATTACCAGCTATA+AGG | + | chr2_4:49458156-49458175 | Msa0332400:intron | 30.0% | |
| CAGTAAATTACCAGCTATAA+GGG | + | chr2_4:49458157-49458176 | Msa0332400:intron | 30.0% | |
| AGTAAATTACCAGCTATAAG+GGG | + | chr2_4:49458158-49458177 | Msa0332400:intron | 30.0% | |
| TGTATACACAAAATGGAAAC+CGG | - | chr2_4:49458200-49458219 | None:intergenic | 30.0% | |
| ! | ATTATGAGGATGGGTTTAAA+AGG | - | chr2_4:49458258-49458277 | None:intergenic | 30.0% |
| ! | AAGTATGAGGTTTTCTTGTT+TGG | - | chr2_4:49458449-49458468 | None:intergenic | 30.0% |
| !! | AAGTTGAGATTTTTCAAAGG+GGG | + | chr2_4:49458499-49458518 | Msa0332400:intron | 30.0% |
| ! | AGCTTTAACTTTCGTTTCAA+TGG | + | chr2_4:49458531-49458550 | Msa0332400:intron | 30.0% |
| AGTGAGGTAAAACTATAAAC+TGG | + | chr2_4:49458573-49458592 | Msa0332400:intron | 30.0% | |
| AACCATTGAAATGGTTTCAT+GGG | - | chr2_4:49458693-49458712 | None:intergenic | 30.0% | |
| CTATTACTCTGTGTTTACAA+AGG | - | chr2_4:49458755-49458774 | None:intergenic | 30.0% | |
| CTTTGTAAACACAGAGTAAT+AGG | + | chr2_4:49458753-49458772 | Msa0332400:intron | 30.0% | |
| ATATTGAAAGGGTCCAATTA+TGG | - | chr2_4:49458863-49458882 | None:intergenic | 30.0% | |
| ATAATTGGACCCTTTCAATA+TGG | + | chr2_4:49458862-49458881 | Msa0332400:intron | 30.0% | |
| CTAATATGGACCATATTGAA+AGG | - | chr2_4:49458875-49458894 | None:intergenic | 30.0% | |
| CTTTCAATATGGTCCATATT+AGG | + | chr2_4:49458873-49458892 | Msa0332400:intron | 30.0% | |
| TTCAATATGGTCCATATTAG+GGG | + | chr2_4:49458875-49458894 | Msa0332400:intron | 30.0% | |
| ATTCAGGGTTTATTGAGATT+TGG | + | chr2_4:49459288-49459307 | Msa0332400:intron | 30.0% | |
| TTCAGGGTTTATTGAGATTT+GGG | + | chr2_4:49459289-49459308 | Msa0332400:intron | 30.0% | |
| CTTATTTAGTTGTAACACAC+TGG | - | chr2_4:49459599-49459618 | None:intergenic | 30.0% | |
| ATCGACTAAGAAAGAATACA+AGG | - | chr2_4:49460150-49460169 | None:intergenic | 30.0% | |
| ATTCTATTCCCTAATCTAGA+GGG | + | chr2_4:49460168-49460187 | Msa0332400:intron | 30.0% | |
| TTCTCAATGTGATAGAATGA+GGG | - | chr2_4:49460227-49460246 | None:intergenic | 30.0% | |
| ATTCTCAATGTGATAGAATG+AGG | - | chr2_4:49460228-49460247 | None:intergenic | 30.0% | |
| ATTGGTTATGTTATGATCCA+TGG | + | chr2_4:49460325-49460344 | Msa0332400:intron | 30.0% | |
| ! | AACTAACGTGATTTCTCTTT+TGG | - | chr2_4:49460391-49460410 | None:intergenic | 30.0% |
| ! | GTGATTAAAGTATCATACTC+AGG | - | chr2_4:49460548-49460567 | None:intergenic | 30.0% |
| !! | TCTATTTCTGCAATGTCATA+TGG | - | chr2_4:49460593-49460612 | None:intergenic | 30.0% |
| AGAAATAGATGCTCTTATCT+TGG | + | chr2_4:49460604-49460623 | Msa0332400:intron | 30.0% | |
| ! | AGTTTTTACAGCATTTAGCA+AGG | - | chr2_4:49460752-49460771 | None:intergenic | 30.0% |
| ! | ATAATTTTCATCTGTTTCCG+AGG | - | chr2_4:49461151-49461170 | None:intergenic | 30.0% |
| ! | CCAGTATTTTCCAATTTCAT+AGG | - | chr2_4:49461181-49461200 | None:intergenic | 30.0% |
| CCTATGAAATTGGAAAATAC+TGG | + | chr2_4:49461178-49461197 | Msa0332400:intron | 30.0% | |
| AAGGAATTTGTATCATGGAA+AGG | + | chr2_4:49461247-49461266 | Msa0332400:intron | 30.0% | |
| !! | TCATTCATTTGTTGTCAAGT+CGG | + | chr2_4:49461341-49461360 | Msa0332400:intron | 30.0% |
| ! | CTTGATGGAAATTTTTGACA+GGG | - | chr2_4:49461735-49461754 | None:intergenic | 30.0% |
| ! | TCTTGATGGAAATTTTTGAC+AGG | - | chr2_4:49461736-49461755 | None:intergenic | 30.0% |
| TTAAGGACCAAAAATCTTGA+TGG | - | chr2_4:49461750-49461769 | None:intergenic | 30.0% | |
| TGCTTAAGAAAAATGTCACA+TGG | + | chr2_4:49461772-49461791 | Msa0332400:intron | 30.0% | |
| !!! | GAAAAGATTAGCTTTTTGGT+TGG | - | chr2_4:49461936-49461955 | None:intergenic | 30.0% |
| !!! | GGTCTTGTTTTTAAAACATG+GGG | + | chr2_4:49461985-49462004 | Msa0332400:intron | 30.0% |
| !! | TTGGCTTTTCAGCATTATAT+GGG | - | chr2_4:49462012-49462031 | None:intergenic | 30.0% |
| GAATAAGCATCTCTATGTTA+TGG | + | chr2_4:49462033-49462052 | Msa0332400:intron | 30.0% | |
| CGGATAATGAAAACGATAAA+AGG | + | chr2_4:49462089-49462108 | Msa0332400:intron | 30.0% | |
| AATTATGCTTTCACCAAGAT+TGG | - | chr2_4:49462333-49462352 | None:intergenic | 30.0% | |
| ! | AATCTTGGTGAAAGCATAAT+TGG | + | chr2_4:49462332-49462351 | Msa0332400:CDS | 30.0% |
| !! | GTTTTTAAGCATACATTGCA+TGG | + | chr2_4:49462570-49462589 | Msa0332400:intron | 30.0% |
| TACTTGCATGTATGAATTCA+CGG | + | chr2_4:49462622-49462641 | Msa0332400:intron | 30.0% | |
| ! | AAAAATTCCATTGTCCGTTT+TGG | - | chr2_4:49462753-49462772 | None:intergenic | 30.0% |
| CAGATATATGCAGATTAAGT+CGG | - | chr2_4:49462832-49462851 | None:intergenic | 30.0% | |
| CATTATTGAGCTGCAAAAAA+AGG | - | chr2_4:49462899-49462918 | None:intergenic | 30.0% | |
| CAACATCATCAACATATCAA+TGG | + | chr2_4:49462926-49462945 | Msa0332400:CDS | 30.0% | |
| ! | AAATTTAGGGATGCAAGTTT+TGG | - | chr2_4:49462986-49463005 | None:intergenic | 30.0% |
| ! | AGTTTGTGTTACTGTAATCA+AGG | + | chr2_4:49463205-49463224 | Msa0332400:three_prime_UTR | 30.0% |
| TATGTTTGTGATGTTGGAAG+AGG | - | chr2_4:49455538-49455557 | None:intergenic | 35.0% | |
| AGGGTTTATGTTTGTGATGT+TGG | - | chr2_4:49455544-49455563 | None:intergenic | 35.0% | |
| ! | GTTGGTGTAAATGTGAGTTT+TGG | - | chr2_4:49455578-49455597 | None:intergenic | 35.0% |
| ! | ATGTGAGAGTTTAAGGTTGT+TGG | - | chr2_4:49455596-49455615 | None:intergenic | 35.0% |
| ! | ATTGCATCATGTTGTTGTTG+AGG | - | chr2_4:49455634-49455653 | None:intergenic | 35.0% |
| !!! | GTTCTCCTATTTTGGTTACT+GGG | + | chr2_4:49455768-49455787 | Msa0332400:intron | 35.0% |
| !!! | ATTGTTGCTGCTTTTTTGCT+TGG | + | chr2_4:49455806-49455825 | Msa0332400:CDS | 35.0% |
| ! | TTTTGCTTGGTACTCTTACT+TGG | + | chr2_4:49455819-49455838 | Msa0332400:CDS | 35.0% |
| !! | GTTGGAGTTTTGTGAAATTG+GGG | + | chr2_4:49455991-49456010 | Msa0332400:intron | 35.0% |
| ! | GTTTTGTGAAATTGGGGAAA+TGG | + | chr2_4:49455997-49456016 | Msa0332400:intron | 35.0% |
| !!! | TGTGGAGATTTTGGTTGATT+TGG | + | chr2_4:49456021-49456040 | Msa0332400:intron | 35.0% |
| ! | TGAAATTTGGGAAATGGGTT+TGG | + | chr2_4:49456127-49456146 | Msa0332400:intron | 35.0% |
| !! | TTTGGTTGATTTGGATTCTG+GGG | + | chr2_4:49456154-49456173 | Msa0332400:intron | 35.0% |
| !!! | CACGTTTTAGTTGAAATCAC+TGG | - | chr2_4:49456275-49456294 | None:intergenic | 35.0% |
| !!! | AATGGGTTTTGAGAGTTTTG+TGG | + | chr2_4:49456377-49456396 | Msa0332400:intron | 35.0% |
| !! | GGTTGATGCTTTTTGTACTT+TGG | + | chr2_4:49456511-49456530 | Msa0332400:intron | 35.0% |
| !! | TACTTTGGAGTTGATTGGTT+TGG | + | chr2_4:49456526-49456545 | Msa0332400:intron | 35.0% |
| !! | ACTTTGGAGTTGATTGGTTT+GGG | + | chr2_4:49456527-49456546 | Msa0332400:intron | 35.0% |
| !! | ATTGGTTTGGGGTTTGTTTA+GGG | + | chr2_4:49456539-49456558 | Msa0332400:intron | 35.0% |
| AGCTGCAACAAAAGTCAAAA+TGG | + | chr2_4:49456565-49456584 | Msa0332400:CDS | 35.0% | |
| AGTCAAAATGGCACAGAAAA+TGG | + | chr2_4:49456577-49456596 | Msa0332400:CDS | 35.0% | |
| CTGAGAAAAGAAAAGGAAGA+AGG | + | chr2_4:49456612-49456631 | Msa0332400:CDS | 35.0% | |
| GAGAAAAGAAAAGGAAGAAG+GGG | + | chr2_4:49456614-49456633 | Msa0332400:CDS | 35.0% | |
| ! | TGTGCTTTCCTCACAATTTT+TGG | + | chr2_4:49456677-49456696 | Msa0332400:CDS | 35.0% |
| !!! | TTCCTCACAATTTTTGGAGT+TGG | + | chr2_4:49456683-49456702 | Msa0332400:CDS | 35.0% |
| !! | TAGATCAGTTGGTAAACTAG+GGG | - | chr2_4:49456865-49456884 | None:intergenic | 35.0% |
| !! | GTAGATCAGTTGGTAAACTA+GGG | - | chr2_4:49456866-49456885 | None:intergenic | 35.0% |
| !! | AGTAGATCAGTTGGTAAACT+AGG | - | chr2_4:49456867-49456886 | None:intergenic | 35.0% |
| AGGTTGCATTGTCCTTTATT+TGG | + | chr2_4:49457260-49457279 | Msa0332400:intron | 35.0% | |
| ! | GCGAGAAAATGCTTTATTAG+TGG | + | chr2_4:49457323-49457342 | Msa0332400:intron | 35.0% |
| TTGTTTGTTTCCCTAACAGT+TGG | + | chr2_4:49457479-49457498 | Msa0332400:intron | 35.0% | |
| ACTTACCTATCCAACTGTTA+GGG | - | chr2_4:49457492-49457511 | None:intergenic | 35.0% | |
| TACTTACCTATCCAACTGTT+AGG | - | chr2_4:49457493-49457512 | None:intergenic | 35.0% | |
| TATGGAGAGAGTAAATGTAG+AGG | + | chr2_4:49457584-49457603 | Msa0332400:intron | 35.0% | |
| AGAACAGTCAATGTAGAGTT+AGG | + | chr2_4:49457803-49457822 | Msa0332400:intron | 35.0% | |
| GAACAGTCAATGTAGAGTTA+GGG | + | chr2_4:49457804-49457823 | Msa0332400:intron | 35.0% | |
| AAACAGAGTAAGGATTTGTG+CGG | + | chr2_4:49457858-49457877 | Msa0332400:intron | 35.0% | |
| TAAAATGGGAGCCCTTAATA+TGG | + | chr2_4:49458110-49458129 | Msa0332400:intron | 35.0% | |
| GGCTTAAGAATTATGAGGAT+GGG | - | chr2_4:49458267-49458286 | None:intergenic | 35.0% | |
| AGAAAACCTCATACTTGTGT+TGG | + | chr2_4:49458453-49458472 | Msa0332400:intron | 35.0% | |
| AAGAATTGTAAATGGGAGTG+AGG | + | chr2_4:49458557-49458576 | Msa0332400:intron | 35.0% | |
| CAACCATTGAAATGGTTTCA+TGG | - | chr2_4:49458694-49458713 | None:intergenic | 35.0% | |
| CTTTCGTTCAACCATTGAAA+TGG | - | chr2_4:49458702-49458721 | None:intergenic | 35.0% | |
| TTTATAGAATCGGGCAACTT+GGG | - | chr2_4:49459725-49459744 | None:intergenic | 35.0% | |
| ! | TTTTATAGAATCGGGCAACT+TGG | - | chr2_4:49459726-49459745 | None:intergenic | 35.0% |
| ATACTGATAACACTGATCCA+GGG | - | chr2_4:49459757-49459776 | None:intergenic | 35.0% | |
| AGATTGTGCTCATTTCACAT+TGG | - | chr2_4:49459831-49459850 | None:intergenic | 35.0% | |
| ! | GAAATGAGCACAATCTCTTT+TGG | + | chr2_4:49459835-49459854 | Msa0332400:intron | 35.0% |
| GTCAAGTCTATACCAACAAA+GGG | - | chr2_4:49459904-49459923 | None:intergenic | 35.0% | |
| !! | ATTTGAGTTGAACTGAGTTG+TGG | + | chr2_4:49459981-49460000 | Msa0332400:intron | 35.0% |
| ! | CTGGTTTAACAGGTGTATTT+TGG | - | chr2_4:49460058-49460077 | None:intergenic | 35.0% |
| AGAATCCCATAAATCCAATC+AGG | - | chr2_4:49460125-49460144 | None:intergenic | 35.0% | |
| GATTCTATTCCCTAATCTAG+AGG | + | chr2_4:49460167-49460186 | Msa0332400:intron | 35.0% | |
| GCAATCTTGAATCTCCTATT+TGG | + | chr2_4:49460282-49460301 | Msa0332400:intron | 35.0% | |
| !!! | CGTGATTTCTCTTTTGGTTT+AGG | - | chr2_4:49460385-49460404 | None:intergenic | 35.0% |
| AATTGTACGGTTTCCTTTCT+TGG | - | chr2_4:49460434-49460453 | None:intergenic | 35.0% | |
| CGATATTCTTGAGGTGAAAA+TGG | - | chr2_4:49460514-49460533 | None:intergenic | 35.0% | |
| ACCTCAAGAATATCGTTGAA+GGG | + | chr2_4:49460519-49460538 | Msa0332400:intron | 35.0% | |
| AGTACTTGACCCAAATTAAG+TGG | - | chr2_4:49460710-49460729 | None:intergenic | 35.0% | |
| AAGTTTAACCGCGTTAAAGT+GGG | - | chr2_4:49460798-49460817 | None:intergenic | 35.0% | |
| TTCACTTTATACTTCGGTCA+TGG | + | chr2_4:49460816-49460835 | Msa0332400:intron | 35.0% | |
| TTATACTTCGGTCATGGAAA+AGG | + | chr2_4:49460822-49460841 | Msa0332400:intron | 35.0% | |
| GCATACTTAATATTGGAACG+AGG | - | chr2_4:49460901-49460920 | None:intergenic | 35.0% | |
| AGAATTGATACATTCCGTGA+TGG | + | chr2_4:49461068-49461087 | Msa0332400:intron | 35.0% | |
| CAAGTATATACGTTCCATCA+CGG | - | chr2_4:49461085-49461104 | None:intergenic | 35.0% | |
| ! | AGGATCATTAGTTGATTCCT+CGG | + | chr2_4:49461131-49461150 | Msa0332400:intron | 35.0% |
| TTTGTAGGGAAGAGAATCAA+AGG | + | chr2_4:49461228-49461247 | Msa0332400:intron | 35.0% | |
| AGCTATGCATCTAAACATTG+TGG | + | chr2_4:49461402-49461421 | Msa0332400:intron | 35.0% | |
| ATTGTGGATCCTACAAATTG+AGG | + | chr2_4:49461418-49461437 | Msa0332400:intron | 35.0% | |
| TTGTGGATCCTACAAATTGA+GGG | + | chr2_4:49461419-49461438 | Msa0332400:intron | 35.0% | |
| ! | CTTCAATTTGTTCACATGGA+TGG | + | chr2_4:49461526-49461545 | Msa0332400:intron | 35.0% |
| ! | GTCCCTATAAAATTTTCCGT+CGG | + | chr2_4:49461668-49461687 | Msa0332400:intron | 35.0% |
| ! | TGCCGACGGAAAATTTTATA+GGG | - | chr2_4:49461673-49461692 | None:intergenic | 35.0% |
| ! | ATGCCGACGGAAAATTTTAT+AGG | - | chr2_4:49461674-49461693 | None:intergenic | 35.0% |
| !!! | CTGGGAAAAGATTAGCTTTT+TGG | - | chr2_4:49461940-49461959 | None:intergenic | 35.0% |
| CAGGTTCAACAAATTCAACT+GGG | - | chr2_4:49461958-49461977 | None:intergenic | 35.0% | |
| !!! | GTTGGCTTTTCAGCATTATA+TGG | - | chr2_4:49462013-49462032 | None:intergenic | 35.0% |
| ACATAGAGATGCTTATTCGT+TGG | - | chr2_4:49462031-49462050 | None:intergenic | 35.0% | |
| GGAATTTAAGTCAATGAGGA+AGG | - | chr2_4:49462140-49462159 | None:intergenic | 35.0% | |
| TGACGGAATTTAAGTCAATG+AGG | - | chr2_4:49462144-49462163 | None:intergenic | 35.0% | |
| TGCAAGTAACACATGTTGAT+AGG | - | chr2_4:49462610-49462629 | None:intergenic | 35.0% | |
| ! | GGCTTTTGTTAAAATCATGG+TGG | - | chr2_4:49462678-49462697 | None:intergenic | 35.0% |
| !!! | GCTGGCTTTTGTTAAAATCA+TGG | - | chr2_4:49462681-49462700 | None:intergenic | 35.0% |
| ! | AAGCCAGCTTTAACAAAATC+AGG | + | chr2_4:49462693-49462712 | Msa0332400:intron | 35.0% |
| ! | AGCCAGCTTTAACAAAATCA+GGG | + | chr2_4:49462694-49462713 | Msa0332400:intron | 35.0% |
| TAATTCTGGGCTGAAAATGA+AGG | + | chr2_4:49462788-49462807 | Msa0332400:intron | 35.0% | |
| AATTCTGGGCTGAAAATGAA+GGG | + | chr2_4:49462789-49462808 | Msa0332400:intron | 35.0% | |
| ATATATGCAGATTAAGTCGG+AGG | - | chr2_4:49462829-49462848 | None:intergenic | 35.0% | |
| CGACTTAATCTGCATATATC+TGG | + | chr2_4:49462830-49462849 | Msa0332400:intron | 35.0% | |
| AGTAAGACACTTCAACATCT+AGG | - | chr2_4:49463084-49463103 | None:intergenic | 35.0% | |
| !!! | AGTTTTGGAGAGAGCGAATA+GGG | - | chr2_4:49455563-49455582 | None:intergenic | 40.0% |
| GCGAAGAATGTGAGAGTTTA+AGG | - | chr2_4:49455603-49455622 | None:intergenic | 40.0% | |
| TCGAGTGTTCAAGATGTTGT+TGG | + | chr2_4:49455665-49455684 | Msa0332400:CDS | 40.0% | |
| AGTGTTCAAGATGTTGTTGG+AGG | + | chr2_4:49455668-49455687 | Msa0332400:CDS | 40.0% | |
| TAACAAAGAAGATTGCCACG+TGG | - | chr2_4:49455723-49455742 | None:intergenic | 40.0% | |
| ! | TGTGTTGGGTTCTCCTATTT+TGG | + | chr2_4:49455760-49455779 | Msa0332400:intron | 40.0% |
| !!! | GGTTCTCCTATTTTGGTTAC+TGG | + | chr2_4:49455767-49455786 | Msa0332400:intron | 40.0% |
| GACAACCCAGTAACCAAAAT+AGG | - | chr2_4:49455776-49455795 | None:intergenic | 40.0% | |
| ! | TTACTGGGTTGTCGTTTGAA+GGG | + | chr2_4:49455783-49455802 | Msa0332400:intron | 40.0% |
| !! | GGAAATGGGTTTGGAGATTT+TGG | + | chr2_4:49456136-49456155 | Msa0332400:intron | 40.0% |
| !!! | AATGTTTTGTTTGTGGGGTG+TGG | + | chr2_4:49456301-49456320 | Msa0332400:intron | 40.0% |
| !!! | ATGTTTTGTTTGTGGGGTGT+GGG | + | chr2_4:49456302-49456321 | Msa0332400:intron | 40.0% |
| !! | CTTTGGAGTTGATTGGTTTG+GGG | + | chr2_4:49456528-49456547 | Msa0332400:intron | 40.0% |
| !! | GATTGGTTTGGGGTTTGTTT+AGG | + | chr2_4:49456538-49456557 | Msa0332400:intron | 40.0% |
| ATGGCACAGAAAATGGAACA+AGG | + | chr2_4:49456584-49456603 | Msa0332400:CDS | 40.0% | |
| TGGCACAGAAAATGGAACAA+GGG | + | chr2_4:49456585-49456604 | Msa0332400:CDS | 40.0% | |
| CTCCAACTCCAAAAATTGTG+AGG | - | chr2_4:49456688-49456707 | None:intergenic | 40.0% | |
| !!! | CTCACAATTTTTGGAGTTGG+AGG | + | chr2_4:49456686-49456705 | Msa0332400:CDS | 40.0% |
| !!! | AATTTTTGGAGTTGGAGGAG+CGG | + | chr2_4:49456691-49456710 | Msa0332400:CDS | 40.0% |
| !!! | TTTTCTCAGCTTTGGAGACT+TGG | + | chr2_4:49456716-49456735 | Msa0332400:CDS | 40.0% |
| !! | TTTCTCAGCTTTGGAGACTT+GGG | + | chr2_4:49456717-49456736 | Msa0332400:CDS | 40.0% |
| TCTCAAGTCAGTAGATCAGT+TGG | - | chr2_4:49456876-49456895 | None:intergenic | 40.0% | |
| AAGCACACGGAACTTTACTA+AGG | - | chr2_4:49457030-49457049 | None:intergenic | 40.0% | |
| GTACCTAGTTACGTCATTCA+AGG | + | chr2_4:49457059-49457078 | Msa0332400:CDS | 40.0% | |
| CTACCTTGAATGACGTAACT+AGG | - | chr2_4:49457065-49457084 | None:intergenic | 40.0% | |
| TCATTCAAGGTAGTTCCAAG+AGG | + | chr2_4:49457072-49457091 | Msa0332400:CDS | 40.0% | |
| ! | TAGTTCCAAGAGGTACAGAA+GGG | + | chr2_4:49457082-49457101 | Msa0332400:CDS | 40.0% |
| AGATGCTAAAATTCCAGCCA+AGG | - | chr2_4:49457127-49457146 | None:intergenic | 40.0% | |
| ! | TGCCTTTGTCAGTTTTCTTC+TGG | + | chr2_4:49457155-49457174 | Msa0332400:CDS | 40.0% |
| ! | GCCTTTGTCAGTTTTCTTCT+GGG | + | chr2_4:49457156-49457175 | Msa0332400:CDS | 40.0% |
| TTTATGGGATTACTGTGGGT+GGG | + | chr2_4:49457214-49457233 | Msa0332400:intron | 40.0% | |
| !! | GTGGGAAGAATGGATTAATG+AGG | + | chr2_4:49457232-49457251 | Msa0332400:intron | 40.0% |
| TGTTTCCCTAACAGTTGGAT+AGG | + | chr2_4:49457484-49457503 | Msa0332400:intron | 40.0% | |
| GGAAACCTCTTAAGGATCTT+TGG | + | chr2_4:49457662-49457681 | Msa0332400:intron | 40.0% | |
| !! | TGCGAAATTAAGTGCTGACA+GGG | + | chr2_4:49457832-49457851 | Msa0332400:intron | 40.0% |
| GACAGGGATAAAACAGAGTA+AGG | + | chr2_4:49457848-49457867 | Msa0332400:intron | 40.0% | |
| ATACTCCCCCAATAACATCA+AGG | + | chr2_4:49458045-49458064 | Msa0332400:intron | 40.0% | |
| ! | ATAAGGGGTACAGACTTTGT+AGG | + | chr2_4:49458173-49458192 | Msa0332400:intron | 40.0% |
| CGGCTTAAGAATTATGAGGA+TGG | - | chr2_4:49458268-49458287 | None:intergenic | 40.0% | |
| ACAGCGGCTTAAGAATTATG+AGG | - | chr2_4:49458272-49458291 | None:intergenic | 40.0% | |
| CTAGTACCAACACAAGTATG+AGG | - | chr2_4:49458462-49458481 | None:intergenic | 40.0% | |
| TGGTCGTGGATCTTAAAGTT+TGG | - | chr2_4:49458599-49458618 | None:intergenic | 40.0% | |
| ACCACAACTAAGTAAGGAGA+TGG | + | chr2_4:49458615-49458634 | Msa0332400:intron | 40.0% | |
| TCCATCTCCTTACTTAGTTG+TGG | - | chr2_4:49458619-49458638 | None:intergenic | 40.0% | |
| ACAACTAAGTAAGGAGATGG+AGG | + | chr2_4:49458618-49458637 | Msa0332400:intron | 40.0% | |
| CTCACTCATAGATAGAAACC+AGG | + | chr2_4:49458660-49458679 | Msa0332400:intron | 40.0% | |
| TTGAAATGGTTTCATGGGTG+TGG | - | chr2_4:49458688-49458707 | None:intergenic | 40.0% | |
| CACCCATGAAACCATTTCAA+TGG | + | chr2_4:49458688-49458707 | Msa0332400:intron | 40.0% | |
| CAGCATCAATGGTCCATAAT+TGG | + | chr2_4:49458847-49458866 | Msa0332400:intron | 40.0% | |
| TTAAAACGGTGCCCCTAATA+TGG | - | chr2_4:49458889-49458908 | None:intergenic | 40.0% | |
| ! | CGGAGGCTTTTTATAGAATC+GGG | - | chr2_4:49459734-49459753 | None:intergenic | 40.0% |
| ! | GCGGAGGCTTTTTATAGAAT+CGG | - | chr2_4:49459735-49459754 | None:intergenic | 40.0% |
| GATACTGATAACACTGATCC+AGG | - | chr2_4:49459758-49459777 | None:intergenic | 40.0% | |
| TGCTCATTTCACATTGGACT+TGG | - | chr2_4:49459825-49459844 | None:intergenic | 40.0% | |
| AACAAAGCGAACAGTGATTC+AGG | - | chr2_4:49459862-49459881 | None:intergenic | 40.0% | |
| GCTGTACAAATTCCCTTTGT+TGG | + | chr2_4:49459889-49459908 | Msa0332400:intron | 40.0% | |
| GGTCAAGTCTATACCAACAA+AGG | - | chr2_4:49459905-49459924 | None:intergenic | 40.0% | |
| TGGTTCAGTTTAGTATCGTC+TGG | - | chr2_4:49459955-49459974 | None:intergenic | 40.0% | |
| GATACTAAACTGAACCAGAC+TGG | + | chr2_4:49459958-49459977 | Msa0332400:intron | 40.0% | |
| AGTTCAACTCAAATCCAGTC+TGG | - | chr2_4:49459975-49459994 | None:intergenic | 40.0% | |
| ! | TGCTCTGAGTCGTTCTATTT+CGG | - | chr2_4:49460008-49460027 | None:intergenic | 40.0% |
| !!! | TATTTTGGTTCTGTCTGACC+TGG | - | chr2_4:49460043-49460062 | None:intergenic | 40.0% |
| ! | TTGGTCTGATCTGGTTTAAC+AGG | - | chr2_4:49460068-49460087 | None:intergenic | 40.0% |
| !! | TGGTTTAGTTTGGTCTGATC+TGG | - | chr2_4:49460077-49460096 | None:intergenic | 40.0% |
| AGATCAGACCAAACTAAACC+AGG | + | chr2_4:49460076-49460095 | Msa0332400:intron | 40.0% | |
| ACCAAACTAAACCAGGTTGT+GGG | + | chr2_4:49460083-49460102 | Msa0332400:intron | 40.0% | |
| ATTCCCTAATCTAGAGGGAT+TGG | + | chr2_4:49460173-49460192 | Msa0332400:intron | 40.0% | |
| CAACCAATCCCTCTAGATTA+GGG | - | chr2_4:49460179-49460198 | None:intergenic | 40.0% | |
| TTGCAGTCATGAAAGACTTG+AGG | - | chr2_4:49460266-49460285 | None:intergenic | 40.0% | |
| TTATGATCCATGGCTACTGT+GGG | + | chr2_4:49460335-49460354 | Msa0332400:intron | 40.0% | |
| CTACTGTGGGAGAAAATTCA+CGG | + | chr2_4:49460348-49460367 | Msa0332400:intron | 40.0% | |
| AAACTGCTCAACACCAAGAA+AGG | + | chr2_4:49460418-49460437 | Msa0332400:intron | 40.0% | |
| TCAAAGCCCTGATTGATATC+TGG | + | chr2_4:49460473-49460492 | Msa0332400:intron | 40.0% | |
| CACCTCAAGAATATCGTTGA+AGG | + | chr2_4:49460518-49460537 | Msa0332400:intron | 40.0% | |
| GGTCAAGTACTAATAGCTAC+AGG | + | chr2_4:49460719-49460738 | Msa0332400:intron | 40.0% | |
| GAAGTTTAACCGCGTTAAAG+TGG | - | chr2_4:49460799-49460818 | None:intergenic | 40.0% | |
| TCAAGTCGGAACTGTAACAT+AGG | + | chr2_4:49461355-49461374 | Msa0332400:intron | 40.0% | |
| CAAGTCGGAACTGTAACATA+GGG | + | chr2_4:49461356-49461375 | Msa0332400:intron | 40.0% | |
| AAGTCGGAACTGTAACATAG+GGG | + | chr2_4:49461357-49461376 | Msa0332400:intron | 40.0% | |
| CTGTAACATAGGGGGTAAAA+AGG | + | chr2_4:49461366-49461385 | Msa0332400:intron | 40.0% | |
| CCTATGTTCCCTCAATTTGT+AGG | - | chr2_4:49461430-49461449 | None:intergenic | 40.0% | |
| CCTACAAATTGAGGGAACAT+AGG | + | chr2_4:49461427-49461446 | Msa0332400:intron | 40.0% | |
| AACCAGATCAGAGATTGAAC+TGG | + | chr2_4:49461494-49461513 | Msa0332400:intron | 40.0% | |
| ! | CGTGCTTCAATTTGTTCACA+TGG | + | chr2_4:49461522-49461541 | Msa0332400:intron | 40.0% |
| ATAGGGACTAAAAATGCCGA+CGG | - | chr2_4:49461687-49461706 | None:intergenic | 40.0% | |
| GCAGGTTCAACAAATTCAAC+TGG | - | chr2_4:49461959-49461978 | None:intergenic | 40.0% | |
| !! | GTTGAATTTGTTGAACCTGC+CGG | + | chr2_4:49461959-49461978 | Msa0332400:intron | 40.0% |
| AAGGAAAAGCTGCTGTCAAA+AGG | - | chr2_4:49462121-49462140 | None:intergenic | 40.0% | |
| TTCACCAAGATTGGCAAACT+GGG | - | chr2_4:49462324-49462343 | None:intergenic | 40.0% | |
| TTTCACCAAGATTGGCAAAC+TGG | - | chr2_4:49462325-49462344 | None:intergenic | 40.0% | |
| TGGTGCTTCATTTCAAGAGA+AGG | + | chr2_4:49462352-49462371 | Msa0332400:CDS | 40.0% | |
| GCTTCATTTCAAGAGAAGGA+AGG | + | chr2_4:49462356-49462375 | Msa0332400:CDS | 40.0% | |
| AAGAGAAGGAAGGATTTCGA+TGG | + | chr2_4:49462366-49462385 | Msa0332400:CDS | 40.0% | |
| AGAGAAGGAAGGATTTCGAT+GGG | + | chr2_4:49462367-49462386 | Msa0332400:CDS | 40.0% | |
| ATTGGCTACATCAGACATGT+TGG | - | chr2_4:49462444-49462463 | None:intergenic | 40.0% | |
| CACAAGCAGACAGCTTAAAT+TGG | - | chr2_4:49462462-49462481 | None:intergenic | 40.0% | |
| ! | AAGCTGTCTGCTTGTGTTTT+AGG | + | chr2_4:49462466-49462485 | Msa0332400:intron | 40.0% |
| CGGTGAGCTTGACAAAATTA+CGG | + | chr2_4:49462642-49462661 | Msa0332400:intron | 40.0% | |
| GCTTGACAAAATTACGGTGT+CGG | + | chr2_4:49462648-49462667 | Msa0332400:intron | 40.0% | |
| ! | CACCCTGATTTTGTTAAAGC+TGG | - | chr2_4:49462699-49462718 | None:intergenic | 40.0% |
| ! | CAGCTTTAACAAAATCAGGG+TGG | + | chr2_4:49462697-49462716 | Msa0332400:intron | 40.0% |
| !!! | CATTGTCCGTTTTGGAATGA+CGG | - | chr2_4:49462745-49462764 | None:intergenic | 40.0% |
| GTCTCTTGTGTTGAAAGCAA+TGG | + | chr2_4:49463121-49463140 | Msa0332400:three_prime_UTR | 40.0% | |
| !!! | GAGTTTTGGAGAGAGCGAAT+AGG | - | chr2_4:49455564-49455583 | None:intergenic | 45.0% |
| AGATGTTGTTGGAGGAGCTA+TGG | + | chr2_4:49455676-49455695 | Msa0332400:CDS | 45.0% | |
| ! | GTTACTGGGTTGTCGTTTGA+AGG | + | chr2_4:49455782-49455801 | Msa0332400:intron | 45.0% |
| ! | ACTCTTACTTGGCGTGCTTT+TGG | + | chr2_4:49455830-49455849 | Msa0332400:CDS | 45.0% |
| TGAAATTGGGGAAATGGGTG+TGG | + | chr2_4:49456003-49456022 | Msa0332400:intron | 45.0% | |
| ! | GGAAATGGGTGTGGAGATTT+TGG | + | chr2_4:49456012-49456031 | Msa0332400:intron | 45.0% |
| GGCACAGAAAATGGAACAAG+GGG | + | chr2_4:49456586-49456605 | Msa0332400:CDS | 45.0% | |
| GGGGTTGCTGAGAAAAGAAA+AGG | + | chr2_4:49456605-49456624 | Msa0332400:CDS | 45.0% | |
| ! | TGAGACTGTGTCACTCAACT+TGG | - | chr2_4:49456762-49456781 | None:intergenic | 45.0% |
| GACACAGTCTCAAGTGAGAT+CGG | + | chr2_4:49456770-49456789 | Msa0332400:intron | 45.0% | |
| AGTGAGATCGGCAAAGCATA+TGG | + | chr2_4:49456782-49456801 | Msa0332400:intron | 45.0% | |
| GTACCTGGACATTAAGCACA+CGG | - | chr2_4:49457043-49457062 | None:intergenic | 45.0% | |
| GAATGACGTAACTAGGTACC+TGG | - | chr2_4:49457058-49457077 | None:intergenic | 45.0% | |
| ! | GTAGTTCCAAGAGGTACAGA+AGG | + | chr2_4:49457081-49457100 | Msa0332400:CDS | 45.0% |
| ! | AGTTCCAAGAGGTACAGAAG+GGG | + | chr2_4:49457083-49457102 | Msa0332400:CDS | 45.0% |
| ! | GGTTAGTGTTGAAGGAACCT+TGG | + | chr2_4:49457107-49457126 | Msa0332400:CDS | 45.0% |
| GCCCAGAAGAAAACTGACAA+AGG | - | chr2_4:49457160-49457179 | None:intergenic | 45.0% | |
| GTTTATGGGATTACTGTGGG+TGG | + | chr2_4:49457213-49457232 | Msa0332400:intron | 45.0% | |
| ATTACTGTGGGTGGGAAGAA+TGG | + | chr2_4:49457222-49457241 | Msa0332400:intron | 45.0% | |
| TGGACAGTGGAAACCTCTTA+AGG | + | chr2_4:49457654-49457673 | Msa0332400:intron | 45.0% | |
| ACCTCTTAAGGATCTTTGGC+TGG | + | chr2_4:49457666-49457685 | Msa0332400:intron | 45.0% | |
| ACCAGCCAAAGATCCTTAAG+AGG | - | chr2_4:49457670-49457689 | None:intergenic | 45.0% | |
| CTTTGCAGCTCAAATCCCTA+AGG | - | chr2_4:49457710-49457729 | None:intergenic | 45.0% | |
| AGGGATTTGAGCTGCAAAGT+AGG | + | chr2_4:49457711-49457730 | Msa0332400:intron | 45.0% | |
| GGGATTTGAGCTGCAAAGTA+GGG | + | chr2_4:49457712-49457731 | Msa0332400:intron | 45.0% | |
| AACTTTGCAACTATCTGCGC+AGG | - | chr2_4:49457770-49457789 | None:intergenic | 45.0% | |
| TGCGCAGATAGTTGCAAAGT+TGG | + | chr2_4:49457769-49457788 | Msa0332400:intron | 45.0% | |
| GCGCAGATAGTTGCAAAGTT+GGG | + | chr2_4:49457770-49457789 | Msa0332400:intron | 45.0% | |
| CAGATAGTTGCAAAGTTGGG+TGG | + | chr2_4:49457773-49457792 | Msa0332400:intron | 45.0% | |
| !! | CTGCGAAATTAAGTGCTGAC+AGG | + | chr2_4:49457831-49457850 | Msa0332400:intron | 45.0% |
| AGAGTAAGGATTTGTGCGGT+GGG | + | chr2_4:49457862-49457881 | Msa0332400:intron | 45.0% | |
| GTGTGCGTTTGCGTTTGTAT+GGG | + | chr2_4:49457884-49457903 | Msa0332400:intron | 45.0% | |
| TGTGCGTTTGCGTTTGTATG+GGG | + | chr2_4:49457885-49457904 | Msa0332400:intron | 45.0% | |
| TTTGCGTTTGTATGGGGGTT+GGG | + | chr2_4:49457891-49457910 | Msa0332400:intron | 45.0% | |
| AAGTCTGTACCCCTTATAGC+TGG | - | chr2_4:49458170-49458189 | None:intergenic | 45.0% | |
| TCCACGACCACAACTAAGTA+AGG | + | chr2_4:49458609-49458628 | Msa0332400:intron | 45.0% | |
| TCCTTACTTAGTTGTGGTCG+TGG | - | chr2_4:49458613-49458632 | None:intergenic | 45.0% | |
| AGTAAGGAGATGGAGGTTTG+TGG | + | chr2_4:49458625-49458644 | Msa0332400:intron | 45.0% | |
| GTAAGGAGATGGAGGTTTGT+GGG | + | chr2_4:49458626-49458645 | Msa0332400:intron | 45.0% | |
| CTATAACCGGTCAGCATCAA+TGG | + | chr2_4:49458836-49458855 | Msa0332400:intron | 45.0% | |
| TATGGACCATTGATGCTGAC+CGG | - | chr2_4:49458845-49458864 | None:intergenic | 45.0% | |
| TGGTATAGACTTGACCATCC+TGG | + | chr2_4:49459909-49459928 | Msa0332400:intron | 45.0% | |
| CAGTTTAGTATCGTCTGGTC+TGG | - | chr2_4:49459950-49459969 | None:intergenic | 45.0% | |
| GACCAAACTAAACCAGGTTG+TGG | + | chr2_4:49460082-49460101 | Msa0332400:intron | 45.0% | |
| GCAACCAATCCCTCTAGATT+AGG | - | chr2_4:49460180-49460199 | None:intergenic | 45.0% | |
| GTTATGATCCATGGCTACTG+TGG | + | chr2_4:49460334-49460353 | Msa0332400:intron | 45.0% | |
| ! | ATTTTCTCCCACAGTAGCCA+TGG | - | chr2_4:49460345-49460364 | None:intergenic | 45.0% |
| GCCCTTCAACGATATTCTTG+AGG | - | chr2_4:49460523-49460542 | None:intergenic | 45.0% | |
| AAGCCCGAGTAGAATTCTCT+CGG | + | chr2_4:49460647-49460666 | Msa0332400:intron | 45.0% | |
| ACACCGAGAGAATTCTACTC+GGG | - | chr2_4:49460653-49460672 | None:intergenic | 45.0% | |
| GACACCGAGAGAATTCTACT+CGG | - | chr2_4:49460654-49460673 | None:intergenic | 45.0% | |
| TGCTTCTTCCCACTTTAACG+CGG | + | chr2_4:49460787-49460806 | Msa0332400:intron | 45.0% | |
| GGTCATGGAAAAGGTTCATG+TGG | + | chr2_4:49460831-49460850 | Msa0332400:intron | 45.0% | |
| AAAGGTTCATGTGGTTGCAG+TGG | + | chr2_4:49460840-49460859 | Msa0332400:intron | 45.0% | |
| ! | GGAACGTTTTGCTGATCAAG+AGG | + | chr2_4:49460861-49460880 | Msa0332400:intron | 45.0% |
| ! | TGCTGATCAAGAGGTACAAG+AGG | + | chr2_4:49460870-49460889 | Msa0332400:intron | 45.0% |
| AATTAGGGTCACACGATGAC+AGG | - | chr2_4:49460950-49460969 | None:intergenic | 45.0% | |
| AGTCGGAACTGTAACATAGG+GGG | + | chr2_4:49461358-49461377 | Msa0332400:intron | 45.0% | |
| TGCCAGTTCAATCTCTGATC+TGG | - | chr2_4:49461499-49461518 | None:intergenic | 45.0% | |
| ! | ATTTGTTGAACCTGCCGGTT+TGG | + | chr2_4:49461964-49461983 | Msa0332400:intron | 45.0% |
| AAAAACAAGACCAAACCGGC+AGG | - | chr2_4:49461977-49461996 | None:intergenic | 45.0% | |
| AACACGCCGTCATTCCAAAA+CGG | + | chr2_4:49462736-49462755 | Msa0332400:intron | 45.0% | |
| CGTCATTCCAAAACGGACAA+TGG | + | chr2_4:49462743-49462762 | Msa0332400:intron | 45.0% | |
| !!! | ATTTTATTATTTAATTTCTA+GGG | - | chr2_4:49457380-49457399 | None:intergenic | 5.0% |
| !!! | AATTTTATTATTTAATTTCT+AGG | - | chr2_4:49457381-49457400 | None:intergenic | 5.0% |
| !!! | TTTTATAATTTTATTTAAGA+TGG | + | chr2_4:49457634-49457653 | Msa0332400:intron | 5.0% |
| !! | TGAATATAAAAATATTAAAT+TGG | + | chr2_4:49458813-49458832 | Msa0332400:intron | 5.0% |
| TGTGATGTTGGAAGAGGCGA+GGG | - | chr2_4:49455532-49455551 | None:intergenic | 50.0% | |
| TTGTGATGTTGGAAGAGGCG+AGG | - | chr2_4:49455533-49455552 | None:intergenic | 50.0% | |
| AAAGAAGATTGCCACGTGGC+AGG | - | chr2_4:49455719-49455738 | None:intergenic | 50.0% | |
| ! | CTTACTTGGCGTGCTTTTGG+TGG | + | chr2_4:49455833-49455852 | Msa0332400:CDS | 50.0% |
| TTGTTTGTGGGGTGTGGGAT+TGG | + | chr2_4:49456307-49456326 | Msa0332400:intron | 50.0% | |
| AGAAAAGGAAGAAGGGGTCC+AGG | + | chr2_4:49456620-49456639 | Msa0332400:CDS | 50.0% | |
| GAAAAGGAAGAAGGGGTCCA+GGG | + | chr2_4:49456621-49456640 | Msa0332400:CDS | 50.0% | |
| CTGGATCCAATAACACTCCC+TGG | - | chr2_4:49456641-49456660 | None:intergenic | 50.0% | |
| GTTATTGGATCCAGTGCTGC+CGG | + | chr2_4:49456647-49456666 | Msa0332400:CDS | 50.0% | |
| ! | GAGGAAAGCACAAACGCAAC+CGG | - | chr2_4:49456669-49456688 | None:intergenic | 50.0% |
| !! | GAGCGGCTTTTTCTCAGCTT+TGG | + | chr2_4:49456708-49456727 | Msa0332400:CDS | 50.0% |
| GGTAAACTAGGGGACATCGA+AGG | - | chr2_4:49456855-49456874 | None:intergenic | 50.0% | |
| GTTCCGTGTGCTTAATGTCC+AGG | + | chr2_4:49457037-49457056 | Msa0332400:intron | 50.0% | |
| ! | AGTGTTGAAGGAACCTTGGC+TGG | + | chr2_4:49457111-49457130 | Msa0332400:CDS | 50.0% |
| ! | TGTCAGTTTTCTTCTGGGCG+AGG | + | chr2_4:49457161-49457180 | Msa0332400:CDS | 50.0% |
| CAGAGTAAGGATTTGTGCGG+TGG | + | chr2_4:49457861-49457880 | Msa0332400:intron | 50.0% | |
| GGTGTGCGTTTGCGTTTGTA+TGG | + | chr2_4:49457883-49457902 | Msa0332400:intron | 50.0% | |
| GTGCGTTTGCGTTTGTATGG+GGG | + | chr2_4:49457886-49457905 | Msa0332400:intron | 50.0% | |
| GTTTGCGTTTGTATGGGGGT+TGG | + | chr2_4:49457890-49457909 | Msa0332400:intron | 50.0% | |
| GGGTACAGACTTTGTAGGAC+CGG | + | chr2_4:49458178-49458197 | Msa0332400:intron | 50.0% | |
| ! | TGTGTTGGTACTAGCTGCGA+TGG | + | chr2_4:49458468-49458487 | Msa0332400:intron | 50.0% |
| TCTATAAAAAGCCTCCGCCC+TGG | + | chr2_4:49459737-49459756 | Msa0332400:intron | 50.0% | |
| CTGATAACACTGATCCAGGG+CGG | - | chr2_4:49459754-49459773 | None:intergenic | 50.0% | |
| TGGTCTGGTCAGCTCTTGTT+CGG | - | chr2_4:49459935-49459954 | None:intergenic | 50.0% | |
| AGAGCAAACTGAACTGAGCC+AGG | + | chr2_4:49460022-49460041 | Msa0332400:intron | 50.0% | |
| GCCCACAACCTGGTTTAGTT+TGG | - | chr2_4:49460087-49460106 | None:intergenic | 50.0% | |
| !! | ATCTGATTTGGCCCACAACC+TGG | - | chr2_4:49460097-49460116 | None:intergenic | 50.0% |
| TCCATGTATTGCCAAGCTGC+AGG | - | chr2_4:49461020-49461039 | None:intergenic | 50.0% | |
| GCAGCTTGGCAATACATGGA+AGG | + | chr2_4:49461020-49461039 | Msa0332400:intron | 50.0% | |
| TTGTGGGAGGTTCAACTCAC+TGG | - | chr2_4:49461897-49461916 | None:intergenic | 50.0% | |
| TCCAATCATCACCTGCCACG+TGG | + | chr2_4:49455705-49455724 | Msa0332400:CDS | 55.0% | |
| !!! | TGGCGTGCTTTTGGTGGTGA+TGG | + | chr2_4:49455839-49455858 | Msa0332400:CDS | 55.0% |
| !! | AGGGGTCCAGGGAGTGTTAT+TGG | + | chr2_4:49456632-49456651 | Msa0332400:CDS | 55.0% |
| ! | TCCAAGAGGTACAGAAGGGG+CGG | + | chr2_4:49457086-49457105 | Msa0332400:CDS | 55.0% |
| ! | GAAGGGGCGGTTAGTGTTGA+AGG | + | chr2_4:49457099-49457118 | Msa0332400:CDS | 55.0% |
| GGTTTCATGGGTGTGGTTCC+TGG | - | chr2_4:49458681-49458700 | None:intergenic | 55.0% | |
| ATAACACTGATCCAGGGCGG+AGG | - | chr2_4:49459751-49459770 | None:intergenic | 55.0% | |
| GTCACACGATGACAGGACAC+AGG | - | chr2_4:49460943-49460962 | None:intergenic | 55.0% | |
| CACCATTTCAGCCTGCAGCT+TGG | + | chr2_4:49461006-49461025 | Msa0332400:intron | 55.0% | |
| TGCCAAGCTGCAGGCTGAAA+TGG | - | chr2_4:49461011-49461030 | None:intergenic | 55.0% | |
| GCCTGCAGCTTGGCAATACA+TGG | + | chr2_4:49461016-49461035 | Msa0332400:intron | 55.0% | |
| CAAGCAGTAGAGCTGAGCTG+AGG | + | chr2_4:49461111-49461130 | Msa0332400:intron | 55.0% | |
| GATTGGCAAACTGGGCAGCT+AGG | - | chr2_4:49462316-49462335 | None:intergenic | 55.0% | |
| GCTGCCCAGTTTGCCAATCT+TGG | + | chr2_4:49462317-49462336 | Msa0332400:CDS | 55.0% | |
| GCCACGTGGCAGGTGATGAT+TGG | - | chr2_4:49455709-49455728 | None:intergenic | 60.0% | |
| ACAAACGCAACCGGCAGCAC+TGG | - | chr2_4:49456660-49456679 | None:intergenic | 60.0% | |
| ACCGCCCCTTCTGTACCTCT+TGG | - | chr2_4:49457090-49457109 | None:intergenic | 60.0% | |
| CAGCTCTTGTTCGGCCAGGA+TGG | - | chr2_4:49459926-49459945 | None:intergenic | 60.0% | |
| TGGTCAGCTCTTGTTCGGCC+AGG | - | chr2_4:49459930-49459949 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 49455497 | 49463337 | 49455497 | ID=Msa0332400;Name=Msa0332400 |
| chr2_4 | mRNA | 49455497 | 49463337 | 49455497 | ID=Msa0332400-mRNA-1;Parent=Msa0332400;Name=Msa0332400-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.6|0.5|1|0.6|0.83|6|336|278 |
| chr2_4 | exon | 49455497 | 49455743 | 49455497 | ID=Msa0332400-mRNA-1:exon:14787;Parent=Msa0332400-mRNA-1 |
| chr2_4 | exon | 49455804 | 49455892 | 49455804 | ID=Msa0332400-mRNA-1:exon:14788;Parent=Msa0332400-mRNA-1 |
| chr2_4 | exon | 49456560 | 49456738 | 49456560 | ID=Msa0332400-mRNA-1:exon:14789;Parent=Msa0332400-mRNA-1 |
| chr2_4 | exon | 49457059 | 49457182 | 49457059 | ID=Msa0332400-mRNA-1:exon:14790;Parent=Msa0332400-mRNA-1 |
| chr2_4 | exon | 49462284 | 49462388 | 49462284 | ID=Msa0332400-mRNA-1:exon:14791;Parent=Msa0332400-mRNA-1 |
| chr2_4 | exon | 49462909 | 49463337 | 49462909 | ID=Msa0332400-mRNA-1:exon:14792;Parent=Msa0332400-mRNA-1 |
| chr2_4 | CDS | 49455497 | 49455743 | 49455497 | ID=Msa0332400-mRNA-1:cds;Parent=Msa0332400-mRNA-1 |
| chr2_4 | CDS | 49455804 | 49455892 | 49455804 | ID=Msa0332400-mRNA-1:cds;Parent=Msa0332400-mRNA-1 |
| chr2_4 | CDS | 49456560 | 49456738 | 49456560 | ID=Msa0332400-mRNA-1:cds;Parent=Msa0332400-mRNA-1 |
| chr2_4 | CDS | 49457059 | 49457182 | 49457059 | ID=Msa0332400-mRNA-1:cds;Parent=Msa0332400-mRNA-1 |
| chr2_4 | CDS | 49462284 | 49462388 | 49462284 | ID=Msa0332400-mRNA-1:cds;Parent=Msa0332400-mRNA-1 |
| chr2_4 | CDS | 49462909 | 49463001 | 49462909 | ID=Msa0332400-mRNA-1:cds;Parent=Msa0332400-mRNA-1 |
| chr2_4 | three_prime_UTR | 49463002 | 49463337 | 49463002 | ID=Msa0332400-mRNA-1:three_prime_utr;Parent=Msa0332400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
