Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296800 | XP_003596651.1 | 98.311 | 296 | 4 | 1 | 1 | 295 | 1 | 296 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296800 | sp|Q94C53|DDRGK_ARATH | 64.262 | 305 | 92 | 5 | 1 | 295 | 1 | 298 | 4.68e-96 | 288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296800 | G7IJN2 | 98.311 | 296 | 4 | 1 | 1 | 295 | 1 | 296 | 0.0 | 587 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0103480 | Msa0296800 | 0.821852 | 3.238458e-53 | -8.615850e-47 |
| Msa0296800 | Msa0683140 | 0.808059 | 3.730576e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296800 | MtrunA17_Chr2g0319571 | 98.311 | 296 | 4 | 1 | 1 | 295 | 1 | 296 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296800 | AT4G27120.2 | 64.262 | 305 | 92 | 5 | 1 | 295 | 1 | 298 | 4.76e-97 | 288 |
| Msa0296800 | AT4G27120.1 | 64.262 | 305 | 92 | 5 | 1 | 295 | 1 | 298 | 4.76e-97 | 288 |
| Msa0296800 | AT4G27120.3 | 75.000 | 228 | 47 | 4 | 76 | 295 | 4 | 229 | 6.89e-86 | 257 |
Find 78 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTATATATTCAACAAAAT+TGG | 0.202421 | 2_3:-50355175 | None:intergenic |
| GGTTTGATTTACTAGCTAAA+TGG | 0.210956 | 2_3:-50357809 | None:intergenic |
| TTCTGCAGCAAGATCTTCTA+AGG | 0.265042 | 2_3:-50355399 | None:intergenic |
| ATTGTTCTTCTTCGGTTTGC+AGG | 0.293947 | 2_3:-50352127 | None:intergenic |
| AATAAACCTTGTTGCGTTGC+AGG | 0.302830 | 2_3:-50352501 | None:intergenic |
| TCCTCAGCATAATGAGTCTT+TGG | 0.336486 | 2_3:-50357849 | None:intergenic |
| TACTTCCATCTGTCTGAAAC+TGG | 0.338899 | 2_3:-50358185 | None:intergenic |
| GGCCAAAGCATCAAAGAAAA+AGG | 0.344496 | 2_3:+50353356 | Msa0296800:CDS |
| CGGTTTCTATTGTTCTTCTT+CGG | 0.362300 | 2_3:-50352135 | None:intergenic |
| CTTTGACTGCCGAGCTTCTT+CGG | 0.373097 | 2_3:-50354867 | None:intergenic |
| TTTCGGGTGTCATGGATGAT+AGG | 0.388749 | 2_3:+50357706 | Msa0296800:CDS |
| GGATGAAGAGCGTGAGGCAC+AGG | 0.396546 | 2_3:+50354922 | Msa0296800:CDS |
| GTTTGATTTACTAGCTAAAT+GGG | 0.400098 | 2_3:-50357808 | None:intergenic |
| TATCAATCGCATCACATCTC+TGG | 0.405277 | 2_3:+50357232 | Msa0296800:CDS |
| AATCAAAATATCTATCTTTG+CGG | 0.413487 | 2_3:-50352155 | None:intergenic |
| CGTGCAGCAGGTTCTCTAAC+CGG | 0.424599 | 2_3:-50352411 | None:intergenic |
| TTGGCTCTAAATCAATGAAC+TGG | 0.430161 | 2_3:-50357830 | None:intergenic |
| AGAGGAAGCCAAAGCTCAAA+AGG | 0.449793 | 2_3:+50355041 | Msa0296800:CDS |
| CGTCGGAGAACGGTTGCGTC+TGG | 0.451265 | 2_3:+50352456 | Msa0296800:CDS |
| CACTAATTCCACTCTACCTA+TGG | 0.452049 | 2_3:+50352241 | Msa0296800:CDS |
| AATCTTGTCTTGCTATGAAA+AGG | 0.456615 | 2_3:-50358258 | None:intergenic |
| GTAGCGGTGGCACGTGCAGC+AGG | 0.458752 | 2_3:-50352423 | None:intergenic |
| TTCCTCCGAAGAATCTCATC+AGG | 0.463827 | 2_3:+50352299 | Msa0296800:CDS |
| AGAAATAGAATGCACTGATC+TGG | 0.464960 | 2_3:+50357954 | Msa0296800:three_prime_UTR |
| AGGAACTCAAAAGGCAAGAG+AGG | 0.466995 | 2_3:+50353376 | Msa0296800:CDS |
| GCAAACCTGATGAGATTCTT+CGG | 0.472566 | 2_3:-50352304 | None:intergenic |
| TTCAGAAATGCGGAGGTTGA+AGG | 0.477745 | 2_3:+50354901 | Msa0296800:CDS |
| CCGCTACTCGCCGCATGCGT+CGG | 0.483491 | 2_3:+50352439 | Msa0296800:CDS |
| TCGCCGCATGCGTCGGAGAA+CGG | 0.485918 | 2_3:+50352446 | Msa0296800:CDS |
| AGGTCGGCTTTCGGGTGTCA+TGG | 0.491989 | 2_3:+50357698 | Msa0296800:intron |
| AGCTCAAAAGGCTAGGGAAG+AGG | 0.494792 | 2_3:+50355053 | Msa0296800:CDS |
| TGAAACCAGTTTCAGACAGA+TGG | 0.501893 | 2_3:+50358180 | Msa0296800:three_prime_UTR |
| AAATTAATTGAGAAATTACA+TGG | 0.504193 | 2_3:-50358158 | None:intergenic |
| ACCTCCGCATTTCTGAATAA+CGG | 0.508197 | 2_3:-50354895 | None:intergenic |
| TTCGGGTGTCATGGATGATA+GGG | 0.512596 | 2_3:+50357707 | Msa0296800:CDS |
| CATCACATCTCTGGAAAGCA+TGG | 0.517076 | 2_3:+50357241 | Msa0296800:CDS |
| AATCGCGATGGCGTTTCCAT+AGG | 0.517904 | 2_3:-50352257 | None:intergenic |
| AAGCCAAAGCTCAAAAGGCT+AGG | 0.524157 | 2_3:+50355046 | Msa0296800:CDS |
| AAAATTCATTTACATCTCAC+AGG | 0.525131 | 2_3:+50357731 | Msa0296800:CDS |
| ATGAAATTGGAGTAATGCTA+AGG | 0.533723 | 2_3:-50358010 | None:intergenic |
| AGGTACACTTGAAGAGGAGC+AGG | 0.538791 | 2_3:+50355131 | Msa0296800:CDS |
| TGAGGCACAGGAGCGTAAGT+TGG | 0.547791 | 2_3:+50354934 | Msa0296800:CDS |
| TTTGAAAGGCCGAAGAAGCT+CGG | 0.559088 | 2_3:+50354858 | Msa0296800:intron |
| AGCCAAAGCTCAAAAGGCTA+GGG | 0.560451 | 2_3:+50355047 | Msa0296800:CDS |
| CCGACGCATGCGGCGAGTAG+CGG | 0.568591 | 2_3:-50352439 | None:intergenic |
| TTTCTTTACATCATCAACGA+TGG | 0.575763 | 2_3:+50352176 | Msa0296800:exon |
| GCTCCGCCTGCAACGCAACA+AGG | 0.578148 | 2_3:+50352495 | Msa0296800:CDS |
| TTCGGAGGAAGATGAAGATG+AGG | 0.579662 | 2_3:-50352286 | None:intergenic |
| TTATATTAAGCGACAAGGGA+GGG | 0.582545 | 2_3:+50357776 | Msa0296800:CDS |
| ACGCATGCGGCGAGTAGCGG+TGG | 0.584210 | 2_3:-50352436 | None:intergenic |
| AGAGAGGGAAGCTCGACGGC+AGG | 0.585418 | 2_3:+50353392 | Msa0296800:CDS |
| GGCAAGAGAGGGAAGCTCGA+CGG | 0.594227 | 2_3:+50353388 | Msa0296800:CDS |
| TGATGAAGGTACACTTGAAG+AGG | 0.595506 | 2_3:+50355125 | Msa0296800:CDS |
| GGAACTCAAAAGGCAAGAGA+GGG | 0.598128 | 2_3:+50353377 | Msa0296800:CDS |
| TGCTGAGGACATTAGTAACA+TGG | 0.604243 | 2_3:+50357863 | Msa0296800:CDS |
| CAACCGTTCTCCGACGCATG+CGG | 0.605145 | 2_3:-50352449 | None:intergenic |
| TGGCGTTTCCATAGGTAGAG+TGG | 0.606502 | 2_3:-50352249 | None:intergenic |
| ACCGTTATTCAGAAATGCGG+AGG | 0.609223 | 2_3:+50354894 | Msa0296800:CDS |
| AGAATTTAAATTGCGCACAC+AGG | 0.611949 | 2_3:+50355418 | Msa0296800:CDS |
| TTAGAGTTTGACAAGTGGAA+AGG | 0.613934 | 2_3:+50355087 | Msa0296800:CDS |
| ATTATATTAAGCGACAAGGG+AGG | 0.616619 | 2_3:+50357775 | Msa0296800:CDS |
| GAAAGTGACAATGAAGCTGC+TGG | 0.617304 | 2_3:+50353321 | Msa0296800:CDS |
| ATCACATCTCTGGAAAGCAT+GGG | 0.618886 | 2_3:+50357242 | Msa0296800:CDS |
| TCTGCAGCAAGATCTTCTAA+GGG | 0.619289 | 2_3:-50355398 | None:intergenic |
| AAACCTTGTTGCGTTGCAGG+CGG | 0.623759 | 2_3:-50352498 | None:intergenic |
| CTGCGTTAGAGTTTGACAAG+TGG | 0.625306 | 2_3:+50355082 | Msa0296800:CDS |
| GAGATAACTGTCAACTGACA+TGG | 0.625384 | 2_3:+50357888 | Msa0296800:exon |
| CTGATTATATTAAGCGACAA+GGG | 0.630907 | 2_3:+50357772 | Msa0296800:CDS |
| CTGCAATGAGAAGTGTAGAG+AGG | 0.643472 | 2_3:-50352218 | None:intergenic |
| TCGGGTGTCATGGATGATAG+GGG | 0.647827 | 2_3:+50357708 | Msa0296800:CDS |
| GTTGAAGGATGAAGAGCGTG+AGG | 0.648299 | 2_3:+50354916 | Msa0296800:CDS |
| ATGAGGATTGAGAATCGCGA+TGG | 0.648606 | 2_3:-50352269 | None:intergenic |
| GCTGATTATATTAAGCGACA+AGG | 0.652115 | 2_3:+50357771 | Msa0296800:CDS |
| GCCAAAGACTCATTATGCTG+AGG | 0.657399 | 2_3:+50357848 | Msa0296800:CDS |
| AGCTGCTGGTGATGAGCATG+AGG | 0.671214 | 2_3:+50353335 | Msa0296800:CDS |
| AAGACCGTTATTCAGAAATG+CGG | 0.686615 | 2_3:+50354891 | Msa0296800:CDS |
| AACCTGATGAGATTCTTCGG+AGG | 0.714808 | 2_3:-50352301 | None:intergenic |
| TGAGGACATTAGTAACATGG+AGG | 0.752094 | 2_3:+50357866 | Msa0296800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAATAATATTTTAGATAAA+GGG | + | chr2_3:50353912-50353931 | Msa0296800:intron | 10.0% |
| !!! | AAATAATATTTTAGATAAAG+GGG | + | chr2_3:50353913-50353932 | Msa0296800:intron | 10.0% |
| !! | TTTAATTATATGTATGTATT+AGG | - | chr2_3:50356617-50356636 | None:intergenic | 10.0% |
| !! | ATAAATATTCTATAAACTTA+AGG | - | chr2_3:50356696-50356715 | None:intergenic | 10.0% |
| !! | TTATAGAATATTTATATACA+AGG | + | chr2_3:50356701-50356720 | Msa0296800:intron | 10.0% |
| !!! | AGTAATATATTTTTCATTTT+CGG | + | chr2_3:50357171-50357190 | Msa0296800:intron | 10.0% |
| !!! | GATTTAATTTTATTTGTGTT+TGG | + | chr2_3:50352544-50352563 | Msa0296800:intron | 15.0% |
| !! | TAATTGAATTAATTCTTGTT+TGG | + | chr2_3:50352608-50352627 | Msa0296800:intron | 15.0% |
| !!! | AGACTTTTTTGAAAAATAAA+AGG | + | chr2_3:50353890-50353909 | Msa0296800:intron | 15.0% |
| !!! | GGAAATAATATTTTAGATAA+AGG | + | chr2_3:50353911-50353930 | Msa0296800:intron | 15.0% |
| !!! | AATAATATTTTAGATAAAGG+GGG | + | chr2_3:50353914-50353933 | Msa0296800:intron | 15.0% |
| !! | CTTTATATATTCAACAAAAT+TGG | - | chr2_3:50355178-50355197 | None:intergenic | 15.0% |
| !!! | CAATTTTGTTGAATATATAA+AGG | + | chr2_3:50355176-50355195 | Msa0296800:CDS | 15.0% |
| !! | AATAGAATATAAAAAAGAAG+AGG | - | chr2_3:50355498-50355517 | None:intergenic | 15.0% |
| !! | ATATAAATCATTAAACATAC+TGG | - | chr2_3:50355607-50355626 | None:intergenic | 15.0% |
| !!! | TTTTATCTTACATTTTGTAA+TGG | + | chr2_3:50356042-50356061 | Msa0296800:intron | 15.0% |
| !!! | GTAATATATTTTTCATTTTC+GGG | + | chr2_3:50357172-50357191 | Msa0296800:intron | 15.0% |
| !!! | TAATATATTTTTCATTTTCG+GGG | + | chr2_3:50357173-50357192 | Msa0296800:intron | 15.0% |
| !!! | TATATATTTCTTTTGATAGA+TGG | - | chr2_3:50357302-50357321 | None:intergenic | 15.0% |
| !! | AAGAAATATTTGACATAATT+GGG | + | chr2_3:50357455-50357474 | Msa0296800:intron | 15.0% |
| !!! | AATGATTTATTTATTTTGTC+AGG | + | chr2_3:50357678-50357697 | Msa0296800:intron | 15.0% |
| !!! | ATACAGTAAATATATTTTTG+CGG | - | chr2_3:50358039-50358058 | None:intergenic | 15.0% |
| !! | AAATTAATTGAGAAATTACA+TGG | - | chr2_3:50358161-50358180 | None:intergenic | 15.0% |
| !! | AATCAAAATATCTATCTTTG+CGG | - | chr2_3:50352158-50352177 | None:intergenic | 20.0% |
| !! | TTAATTGTGAATAAATCATC+AGG | + | chr2_3:50352386-50352405 | Msa0296800:intron | 20.0% |
| !!! | GTTGTTTTTATAAGTTATCA+TGG | + | chr2_3:50352740-50352759 | Msa0296800:intron | 20.0% |
| !! | ATAAAATTCCATTAATCAGA+TGG | - | chr2_3:50352910-50352929 | None:intergenic | 20.0% |
| !! | TTAAATTTGACTAACCAAAA+TGG | + | chr2_3:50353558-50353577 | Msa0296800:intron | 20.0% |
| !!! | ATAATATTTTAGATAAAGGG+GGG | + | chr2_3:50353915-50353934 | Msa0296800:intron | 20.0% |
| !! | AGATAATACAAAGGATAATT+TGG | + | chr2_3:50353968-50353987 | Msa0296800:intron | 20.0% |
| !!! | AATAGTTTAATTTTGTTCTC+AGG | + | chr2_3:50354325-50354344 | Msa0296800:intron | 20.0% |
| !! | TCATCACTCATTATTAAAAA+TGG | + | chr2_3:50354348-50354367 | Msa0296800:intron | 20.0% |
| !! | CATCACTCATTATTAAAAAT+GGG | + | chr2_3:50354349-50354368 | Msa0296800:intron | 20.0% |
| !! | ATCAAATAACAAGTAAGAAA+AGG | - | chr2_3:50354509-50354528 | None:intergenic | 20.0% |
| !! | AAAAGTTTATTTATGTCCAT+AGG | + | chr2_3:50355260-50355279 | Msa0296800:intron | 20.0% |
| !! | AAAGTTTATTTATGTCCATA+GGG | + | chr2_3:50355261-50355280 | Msa0296800:intron | 20.0% |
| !! | CAAACAATATAAAAAAGAAG+AGG | - | chr2_3:50355531-50355550 | None:intergenic | 20.0% |
| !! | AAAAGAAGTTAGATATTAGT+GGG | - | chr2_3:50355910-50355929 | None:intergenic | 20.0% |
| !!! | TTTTCCCAAACATTATTAAT+TGG | + | chr2_3:50355926-50355945 | Msa0296800:intron | 20.0% |
| !! | ACTTCCAATTAATAATGTTT+GGG | - | chr2_3:50355933-50355952 | None:intergenic | 20.0% |
| !! | AACTTCCAATTAATAATGTT+TGG | - | chr2_3:50355934-50355953 | None:intergenic | 20.0% |
| !! | ATAATCAATTGTTTAATTCG+TGG | + | chr2_3:50356170-50356189 | Msa0296800:intron | 20.0% |
| !! | TAATCAATTGTTTAATTCGT+GGG | + | chr2_3:50356171-50356190 | Msa0296800:intron | 20.0% |
| !! | AGAAACAATATCTTAAAGTT+TGG | + | chr2_3:50356729-50356748 | Msa0296800:intron | 20.0% |
| !! | GAAACAATATCTTAAAGTTT+GGG | + | chr2_3:50356730-50356749 | Msa0296800:intron | 20.0% |
| !!! | TCGACTACTTTATAATTTTA+TGG | + | chr2_3:50356814-50356833 | Msa0296800:intron | 20.0% |
| !! | TTACTTAGAAACATTAGAAA+AGG | - | chr2_3:50357086-50357105 | None:intergenic | 20.0% |
| !!! | TTTCTAATGTTTCTAAGTAA+TGG | + | chr2_3:50357086-50357105 | Msa0296800:intron | 20.0% |
| !! | TAGATGGTAATTTAAAAGAA+AGG | - | chr2_3:50357286-50357305 | None:intergenic | 20.0% |
| !! | TATGATGAAAAATAAACCAA+GGG | - | chr2_3:50357331-50357350 | None:intergenic | 20.0% |
| !! | TGATTGTATATGAATTCAAA+AGG | - | chr2_3:50357382-50357401 | None:intergenic | 20.0% |
| !! | GAAGAAATATTTGACATAAT+TGG | + | chr2_3:50357454-50357473 | Msa0296800:intron | 20.0% |
| !!! | ATTTATTTATTTTGTCAGGT+CGG | + | chr2_3:50357682-50357701 | Msa0296800:intron | 20.0% |
| !!! | TACAGTAAATATATTTTTGC+GGG | - | chr2_3:50358038-50358057 | None:intergenic | 20.0% |
| !!! | AGAAAGTTATTCCATATTTT+TGG | + | chr2_3:50358096-50358115 | Msa0296800:three_prime_UTR | 20.0% |
| ! | TGTTAAATGTGGTGAAATTA+GGG | - | chr2_3:50352346-50352365 | None:intergenic | 25.0% |
| ! | ATAGTGAAATGGAAAAGAAA+AGG | - | chr2_3:50353097-50353116 | None:intergenic | 25.0% |
| ! | ACTTGAACAAAATAGTGAAA+TGG | - | chr2_3:50353108-50353127 | None:intergenic | 25.0% |
| !! | ACTATTTTGTTCAAGTGTTT+AGG | + | chr2_3:50353112-50353131 | Msa0296800:intron | 25.0% |
| !! | CTATTTTGTTCAAGTGTTTA+GGG | + | chr2_3:50353113-50353132 | Msa0296800:intron | 25.0% |
| ! | AAGATGTTATGTGTATATGA+AGG | + | chr2_3:50353598-50353617 | Msa0296800:intron | 25.0% |
| ! | GTGTATATGAAGGTTTAATA+AGG | + | chr2_3:50353608-50353627 | Msa0296800:intron | 25.0% |
| !!! | TAATATTTTAGATAAAGGGG+GGG | + | chr2_3:50353916-50353935 | Msa0296800:intron | 25.0% |
| ! | AAGGTTAATTGGTTAAAAGA+AGG | - | chr2_3:50354057-50354076 | None:intergenic | 25.0% |
| !!! | CAGATTTTGATTTATGAGAT+GGG | - | chr2_3:50354222-50354241 | None:intergenic | 25.0% |
| !!! | ACAGATTTTGATTTATGAGA+TGG | - | chr2_3:50354223-50354242 | None:intergenic | 25.0% |
| ! | ATAACAGAACAATAAACAAG+TGG | + | chr2_3:50354270-50354289 | Msa0296800:intron | 25.0% |
| ! | TAACAGAACAATAAACAAGT+GGG | + | chr2_3:50354271-50354290 | Msa0296800:intron | 25.0% |
| ! | TAAACAACACTATATTGTTG+CGG | + | chr2_3:50354381-50354400 | Msa0296800:intron | 25.0% |
| ! | TATTGCATAAAATAGAGTCA+TGG | - | chr2_3:50354407-50354426 | None:intergenic | 25.0% |
| !!! | CTTACTTGTTATTTGATTTC+TGG | + | chr2_3:50354512-50354531 | Msa0296800:intron | 25.0% |
| ! | CTAAACTAATCATTTAACCA+GGG | - | chr2_3:50354734-50354753 | None:intergenic | 25.0% |
| ! | ACTAAACTAATCATTTAACC+AGG | - | chr2_3:50354735-50354754 | None:intergenic | 25.0% |
| !! | TTTTGGTACTTCTTTTTGAA+AGG | + | chr2_3:50354844-50354863 | Msa0296800:intron | 25.0% |
| !! | AAACTTTTGACAACTTATCA+AGG | - | chr2_3:50355248-50355267 | None:intergenic | 25.0% |
| ! | CTACTTACATATTTAGTTGT+AGG | + | chr2_3:50355657-50355676 | Msa0296800:intron | 25.0% |
| ! | AAAACAAGTGAAAAGACAAT+GGG | + | chr2_3:50355701-50355720 | Msa0296800:intron | 25.0% |
| !! | TGTTTGTTAATATAAACCGA+AGG | - | chr2_3:50355813-50355832 | None:intergenic | 25.0% |
| ! | AAACATGACTAGTATTATAC+AGG | + | chr2_3:50355828-50355847 | Msa0296800:intron | 25.0% |
| ! | AACATGACTAGTATTATACA+GGG | + | chr2_3:50355829-50355848 | Msa0296800:intron | 25.0% |
| ! | GAAAAGAAGTTAGATATTAG+TGG | - | chr2_3:50355911-50355930 | None:intergenic | 25.0% |
| !!! | CTCTCGATTTTTAAAACATT+GGG | - | chr2_3:50356242-50356261 | None:intergenic | 25.0% |
| !!! | ACTCTCGATTTTTAAAACAT+TGG | - | chr2_3:50356243-50356262 | None:intergenic | 25.0% |
| ! | AAGAAACAATCTCTTAAGTT+TGG | + | chr2_3:50356667-50356686 | Msa0296800:intron | 25.0% |
| ! | AGAAACAATCTCTTAAGTTT+GGG | + | chr2_3:50356668-50356687 | Msa0296800:intron | 25.0% |
| ! | CTATGATGAAAAATAAACCA+AGG | - | chr2_3:50357332-50357351 | None:intergenic | 25.0% |
| !!! | AAAACCTTAGCTATTTTTGT+AGG | - | chr2_3:50357570-50357589 | None:intergenic | 25.0% |
| ! | AAAATTCATTTACATCTCAC+AGG | + | chr2_3:50357731-50357750 | Msa0296800:CDS | 25.0% |
| !! | GTTTGATTTACTAGCTAAAT+GGG | - | chr2_3:50357811-50357830 | None:intergenic | 25.0% |
| !!! | AACAATTTTAGCACTTTTGA+AGG | + | chr2_3:50358125-50358144 | Msa0296800:three_prime_UTR | 25.0% |
| TTTCTTTACATCATCAACGA+TGG | + | chr2_3:50352176-50352195 | Msa0296800:exon | 30.0% | |
| !!! | TGAAATTAGGGTTTTGGATT+GGG | - | chr2_3:50352334-50352353 | None:intergenic | 30.0% |
| GTGTTAAATGTGGTGAAATT+AGG | - | chr2_3:50352347-50352366 | None:intergenic | 30.0% | |
| ! | TCGAGTTTTTGTGTTAAATG+TGG | - | chr2_3:50352357-50352376 | None:intergenic | 30.0% |
| !! | TGATGGTGTTTTATGATTGA+TGG | + | chr2_3:50352574-50352593 | Msa0296800:intron | 30.0% |
| ATTCCATAAGCTCTTTCAAA+CGG | + | chr2_3:50352831-50352850 | Msa0296800:intron | 30.0% | |
| AAATTCCATTAATCAGATGG+TGG | - | chr2_3:50352907-50352926 | None:intergenic | 30.0% | |
| ! | TGTGTAGTTTTCTTCTTGAA+AGG | + | chr2_3:50353018-50353037 | Msa0296800:intron | 30.0% |
| ! | GTGTAGTTTTCTTCTTGAAA+GGG | + | chr2_3:50353019-50353038 | Msa0296800:intron | 30.0% |
| AAAATTGAACTGCTGTAGTT+TGG | + | chr2_3:50353054-50353073 | Msa0296800:intron | 30.0% | |
| AAATTGAACTGCTGTAGTTT+GGG | + | chr2_3:50353055-50353074 | Msa0296800:intron | 30.0% | |
| ! | AACTACTTGCCATTGTTATT+TGG | + | chr2_3:50353162-50353181 | Msa0296800:intron | 30.0% |
| TTAAACTAGTACTGCTTTGT+GGG | + | chr2_3:50353215-50353234 | Msa0296800:intron | 30.0% | |
| ! | TTCCTTTTTCTTTGATGCTT+TGG | - | chr2_3:50353361-50353380 | None:intergenic | 30.0% |
| CAAAGAAAAAGGAACTCAAA+AGG | + | chr2_3:50353367-50353386 | Msa0296800:CDS | 30.0% | |
| CACTAAGATATTCATTTGTC+TGG | + | chr2_3:50353484-50353503 | Msa0296800:intron | 30.0% | |
| CAGACATGATATTCAGATAT+TGG | + | chr2_3:50353717-50353736 | Msa0296800:intron | 30.0% | |
| ! | TAATTGTCCGATACAGTTTT+GGG | - | chr2_3:50353770-50353789 | None:intergenic | 30.0% |
| ! | TTAATTGTCCGATACAGTTT+TGG | - | chr2_3:50353771-50353790 | None:intergenic | 30.0% |
| TGTTAGCAGAGAAATTCTAT+AGG | - | chr2_3:50353794-50353813 | None:intergenic | 30.0% | |
| !! | AATATTTTAGATAAAGGGGG+GGG | + | chr2_3:50353917-50353936 | Msa0296800:intron | 30.0% |
| ! | GTTAAAAGAAGGTCATGTTT+TGG | - | chr2_3:50354046-50354065 | None:intergenic | 30.0% |
| TTCATTCTAGTGAAGATCTT+TGG | - | chr2_3:50354199-50354218 | None:intergenic | 30.0% | |
| TAAACTATTGATGTCCTCAT+AGG | - | chr2_3:50354314-50354333 | None:intergenic | 30.0% | |
| TCTCGGATTACTAAACAATA+GGG | - | chr2_3:50354430-50354449 | None:intergenic | 30.0% | |
| AAGAAAAGGCAACAAATTGA+TGG | - | chr2_3:50354495-50354514 | None:intergenic | 30.0% | |
| ! | CTAAGTGGTTGATTAGATTT+TGG | + | chr2_3:50354827-50354846 | Msa0296800:intron | 30.0% |
| CTTTCTTATGGTCTATTGAT+CGG | + | chr2_3:50354996-50355015 | Msa0296800:intron | 30.0% | |
| !!! | GAATTTTCAGTTGATGATGA+AGG | + | chr2_3:50355111-50355130 | Msa0296800:CDS | 30.0% |
| CAACTTATCAAGGCAAAATA+AGG | - | chr2_3:50355238-50355257 | None:intergenic | 30.0% | |
| AACCTAATGGAAATTAGCTA+AGG | + | chr2_3:50355290-50355309 | Msa0296800:intron | 30.0% | |
| ACCTAATGGAAATTAGCTAA+GGG | + | chr2_3:50355291-50355310 | Msa0296800:intron | 30.0% | |
| ! | AGATTGGTCAATTCAGAAAA+AGG | - | chr2_3:50355462-50355481 | None:intergenic | 30.0% |
| AAAAAAGAAGAGGTGATAGA+GGG | - | chr2_3:50355488-50355507 | None:intergenic | 30.0% | |
| TAAAAAAGAAGAGGTGATAG+AGG | - | chr2_3:50355489-50355508 | None:intergenic | 30.0% | |
| AAAAAAGAAGAGGTGATAGA+GGG | - | chr2_3:50355488-50355507 | None:intergenic | 30.0% | |
| TAAAAAAGAAGAGGTGATAG+AGG | - | chr2_3:50355489-50355508 | None:intergenic | 30.0% | |
| GAAAACAAGTGAAAAGACAA+TGG | + | chr2_3:50355700-50355719 | Msa0296800:intron | 30.0% | |
| AAAAGACAATGGGAAAACAA+AGG | + | chr2_3:50355711-50355730 | Msa0296800:intron | 30.0% | |
| AAAGACAATGGGAAAACAAA+GGG | + | chr2_3:50355712-50355731 | Msa0296800:intron | 30.0% | |
| ATTCCACTATTTACAGAGAT+TGG | + | chr2_3:50355757-50355776 | Msa0296800:intron | 30.0% | |
| TAACCAATCTCTGTAAATAG+TGG | - | chr2_3:50355763-50355782 | None:intergenic | 30.0% | |
| TAAAAACATTCAATGTCCTC+AGG | - | chr2_3:50355992-50356011 | None:intergenic | 30.0% | |
| !! | TACATTTTGTAATGGAAGCT+AGG | + | chr2_3:50356050-50356069 | Msa0296800:intron | 30.0% |
| !! | ACATTTTGTAATGGAAGCTA+GGG | + | chr2_3:50356051-50356070 | Msa0296800:intron | 30.0% |
| !! | ATCTCGTAGACAAGTTTTAT+CGG | + | chr2_3:50356111-50356130 | Msa0296800:intron | 30.0% |
| ATCATATCACAGATTCTGAT+AGG | + | chr2_3:50356304-50356323 | Msa0296800:intron | 30.0% | |
| TCATATCACAGATTCTGATA+GGG | + | chr2_3:50356305-50356324 | Msa0296800:intron | 30.0% | |
| ! | AGTTGATATTCATAGAGATG+AGG | + | chr2_3:50356357-50356376 | Msa0296800:intron | 30.0% |
| GCATATTAGCAAATATACCT+AGG | - | chr2_3:50356582-50356601 | None:intergenic | 30.0% | |
| ACATGCACAAAAATCTCTTA+AGG | + | chr2_3:50356640-50356659 | Msa0296800:intron | 30.0% | |
| ! | TTAAAGTTTGGGATTACGTA+AGG | + | chr2_3:50356741-50356760 | Msa0296800:intron | 30.0% |
| AACCTGAACCATATTTCAAT+AGG | + | chr2_3:50356783-50356802 | Msa0296800:intron | 30.0% | |
| ATCCTATTGAAATATGGTTC+AGG | - | chr2_3:50356788-50356807 | None:intergenic | 30.0% | |
| GACATCATCCTATTGAAATA+TGG | - | chr2_3:50356794-50356813 | None:intergenic | 30.0% | |
| TGGTTTATGATAGAACGTTA+TGG | + | chr2_3:50356980-50356999 | Msa0296800:intron | 30.0% | |
| TAAAAGAAAGGATACACGAA+AGG | - | chr2_3:50357274-50357293 | None:intergenic | 30.0% | |
| GAAATATATACACTTTCCCT+TGG | + | chr2_3:50357312-50357331 | Msa0296800:intron | 30.0% | |
| ATGAATTCAAAAGGAGTAGA+TGG | - | chr2_3:50357373-50357392 | None:intergenic | 30.0% | |
| GTTTCCTACAAAAATAGCTA+AGG | + | chr2_3:50357563-50357582 | Msa0296800:intron | 30.0% | |
| !! | GGTTTTATAGGTGTATCAAA+TGG | + | chr2_3:50357613-50357632 | Msa0296800:intron | 30.0% |
| !!! | ATGGAAGTTTTTTCTCACTT+TGG | + | chr2_3:50357632-50357651 | Msa0296800:intron | 30.0% |
| !!! | TGGAAGTTTTTTCTCACTTT+GGG | + | chr2_3:50357633-50357652 | Msa0296800:intron | 30.0% |
| CTGATTATATTAAGCGACAA+GGG | + | chr2_3:50357772-50357791 | Msa0296800:CDS | 30.0% | |
| ! | GGTTTGATTTACTAGCTAAA+TGG | - | chr2_3:50357812-50357831 | None:intergenic | 30.0% |
| !!! | GATCTGGTTTTATTAGGATA+TGG | + | chr2_3:50357970-50357989 | Msa0296800:three_prime_UTR | 30.0% |
| ATGAAATTGGAGTAATGCTA+AGG | - | chr2_3:50358013-50358032 | None:intergenic | 30.0% | |
| ! | ATTTTTGCGGGAAATGAAAT+TGG | - | chr2_3:50358026-50358045 | None:intergenic | 30.0% |
| TTGTTGTGAAGCCAAAAATA+TGG | - | chr2_3:50358110-50358129 | None:intergenic | 30.0% | |
| ! | AATCTTGTCTTGCTATGAAA+AGG | - | chr2_3:50358261-50358280 | None:intergenic | 30.0% |
| CGGTTTCTATTGTTCTTCTT+CGG | - | chr2_3:50352138-50352157 | None:intergenic | 35.0% | |
| !!! | GTGAAATTAGGGTTTTGGAT+TGG | - | chr2_3:50352335-50352354 | None:intergenic | 35.0% |
| ! | ATGTGGTGAAATTAGGGTTT+TGG | - | chr2_3:50352340-50352359 | None:intergenic | 35.0% |
| TTGTGTTTGGTATTGCATGA+TGG | + | chr2_3:50352557-50352576 | Msa0296800:intron | 35.0% | |
| TTTCTTCTTGAAAGGGTTGA+CGG | + | chr2_3:50353026-50353045 | Msa0296800:intron | 35.0% | |
| AATTGAACTGCTGTAGTTTG+GGG | + | chr2_3:50353056-50353075 | Msa0296800:intron | 35.0% | |
| ! | TTTTGTTCAAGTGTTTAGGG+TGG | + | chr2_3:50353116-50353135 | Msa0296800:intron | 35.0% |
| ! | TTAGGGTGGATTTCATAATG+TGG | + | chr2_3:50353130-50353149 | Msa0296800:intron | 35.0% |
| AACAGAGAGCCAAATAACAA+TGG | - | chr2_3:50353174-50353193 | None:intergenic | 35.0% | |
| !!! | GCTCTCTGTTTTTTGTTATG+CGG | + | chr2_3:50353184-50353203 | Msa0296800:intron | 35.0% |
| GTTAAACTAGTACTGCTTTG+TGG | + | chr2_3:50353214-50353233 | Msa0296800:intron | 35.0% | |
| CTTTGTGGGAATAATGTTCA+TGG | + | chr2_3:50353229-50353248 | Msa0296800:intron | 35.0% | |
| ! | GTATACTTTTGAACAGAGTC+TGG | + | chr2_3:50353294-50353313 | Msa0296800:intron | 35.0% |
| ATCATTATGCTCTTAGACAC+AGG | - | chr2_3:50353538-50353557 | None:intergenic | 35.0% | |
| ! | TTTCGAGAAACTCTCCATTT+TGG | - | chr2_3:50353575-50353594 | None:intergenic | 35.0% |
| CACATGATAGGATTACTTTG+AGG | + | chr2_3:50353685-50353704 | Msa0296800:intron | 35.0% | |
| ACATCATCCCAAAACTGTAT+CGG | + | chr2_3:50353760-50353779 | Msa0296800:intron | 35.0% | |
| AACAACCAGTTAAAACCTGA+AGG | + | chr2_3:50353810-50353829 | Msa0296800:intron | 35.0% | |
| TGGAGATAGAGAAGAGAAAA+GGG | - | chr2_3:50354026-50354045 | None:intergenic | 35.0% | |
| TTGGAGATAGAGAAGAGAAA+AGG | - | chr2_3:50354027-50354046 | None:intergenic | 35.0% | |
| ATGACACTCTCAAGGTTAAT+TGG | - | chr2_3:50354068-50354087 | None:intergenic | 35.0% | |
| ! | TTTTGTACACAACAGAGCAA+AGG | + | chr2_3:50354242-50354261 | Msa0296800:intron | 35.0% |
| GTCTCGGATTACTAAACAAT+AGG | - | chr2_3:50354431-50354450 | None:intergenic | 35.0% | |
| ! | GTTGTTGATTGAAGTCTAAG+TGG | + | chr2_3:50354812-50354831 | Msa0296800:intron | 35.0% |
| AAGACCGTTATTCAGAAATG+CGG | + | chr2_3:50354891-50354910 | Msa0296800:CDS | 35.0% | |
| !! | TCTCAGGATTAGCTTTCTTA+TGG | + | chr2_3:50354984-50355003 | Msa0296800:intron | 35.0% |
| TTAGAGTTTGACAAGTGGAA+AGG | + | chr2_3:50355087-50355106 | Msa0296800:CDS | 35.0% | |
| ACCCTTAGCTAATTTCCATT+AGG | - | chr2_3:50355295-50355314 | None:intergenic | 35.0% | |
| GGTTATAATTGTAACCGTGT+GGG | + | chr2_3:50355312-50355331 | Msa0296800:intron | 35.0% | |
| GTTATAATTGTAACCGTGTG+GGG | + | chr2_3:50355313-50355332 | Msa0296800:intron | 35.0% | |
| TTATAATTGTAACCGTGTGG+GGG | + | chr2_3:50355314-50355333 | Msa0296800:intron | 35.0% | |
| AGAATTTAAATTGCGCACAC+AGG | + | chr2_3:50355418-50355437 | Msa0296800:CDS | 35.0% | |
| ! | TGTTTGTTGCTGTTAGTTTG+TGG | + | chr2_3:50355545-50355564 | Msa0296800:intron | 35.0% |
| !! | GTTTGTTGCTGTTAGTTTGT+GGG | + | chr2_3:50355546-50355565 | Msa0296800:intron | 35.0% |
| !!! | GTAGGAATTTTTAGCAGTGT+TGG | + | chr2_3:50355675-50355694 | Msa0296800:intron | 35.0% |
| AACAAAGGGTGATGTAATAG+AGG | + | chr2_3:50355726-50355745 | Msa0296800:intron | 35.0% | |
| TCTTATACTCCATAAGCCAT+CGG | + | chr2_3:50355854-50355873 | Msa0296800:intron | 35.0% | |
| GAAGTTAGATATTAGTGGGA+TGG | - | chr2_3:50355906-50355925 | None:intergenic | 35.0% | |
| !! | TCTCGTAGACAAGTTTTATC+GGG | + | chr2_3:50356112-50356131 | Msa0296800:intron | 35.0% |
| TCTTGTGATTCTCAATTGCA+TGG | + | chr2_3:50356414-50356433 | Msa0296800:intron | 35.0% | |
| GATTCAGTTAAACTAAGCCT+AGG | + | chr2_3:50356562-50356581 | Msa0296800:intron | 35.0% | |
| ! | TTTTATGGCGTTAACATGAC+TGG | + | chr2_3:50356829-50356848 | Msa0296800:intron | 35.0% |
| !! | GTTTCGACTGGGTTTTATAT+TGG | + | chr2_3:50356870-50356889 | Msa0296800:intron | 35.0% |
| ATGCATAATGAGGCTATCAT+AGG | + | chr2_3:50356944-50356963 | Msa0296800:intron | 35.0% | |
| ATAATGAGGCTATCATAGGA+AGG | + | chr2_3:50356948-50356967 | Msa0296800:intron | 35.0% | |
| ! | TCATAGGAAGGATTAGCATA+TGG | + | chr2_3:50356960-50356979 | Msa0296800:intron | 35.0% |
| TGTTCTTGAAACTGACTGAT+CGG | + | chr2_3:50357058-50357077 | Msa0296800:intron | 35.0% | |
| ! | AAGTAATGGAGCCCTATTTA+CGG | + | chr2_3:50357100-50357119 | Msa0296800:intron | 35.0% |
| ATGACACTGTAAACTTATGC+AGG | + | chr2_3:50357205-50357224 | Msa0296800:intron | 35.0% | |
| TCAAAAGGAGTAGATGGTAA+TGG | - | chr2_3:50357367-50357386 | None:intergenic | 35.0% | |
| ACATGGCATCTAATCTAACA+TGG | - | chr2_3:50357410-50357429 | None:intergenic | 35.0% | |
| TACCCTATTGTTGCAAGTTA+TGG | + | chr2_3:50357508-50357527 | Msa0296800:intron | 35.0% | |
| ACCCTATTGTTGCAAGTTAT+GGG | + | chr2_3:50357509-50357528 | Msa0296800:intron | 35.0% | |
| !! | AGCATGTACGTAGGTTTTAT+AGG | + | chr2_3:50357601-50357620 | Msa0296800:intron | 35.0% |
| GCTGATTATATTAAGCGACA+AGG | + | chr2_3:50357771-50357790 | Msa0296800:CDS | 35.0% | |
| ATTATATTAAGCGACAAGGG+AGG | + | chr2_3:50357775-50357794 | Msa0296800:CDS | 35.0% | |
| TTATATTAAGCGACAAGGGA+GGG | + | chr2_3:50357776-50357795 | Msa0296800:CDS | 35.0% | |
| !! | TTGGCTCTAAATCAATGAAC+TGG | - | chr2_3:50357833-50357852 | None:intergenic | 35.0% |
| !!! | TGTCAACTGACATGGTTTTT+TGG | + | chr2_3:50357896-50357915 | Msa0296800:exon | 35.0% |
| ! | AGAAATAGAATGCACTGATC+TGG | + | chr2_3:50357954-50357973 | Msa0296800:three_prime_UTR | 35.0% |
| !!! | TGCACTGATCTGGTTTTATT+AGG | + | chr2_3:50357964-50357983 | Msa0296800:three_prime_UTR | 35.0% |
| ! | ATTGTTCTTCTTCGGTTTGC+AGG | - | chr2_3:50352130-50352149 | None:intergenic | 40.0% |
| CACTAATTCCACTCTACCTA+TGG | + | chr2_3:50352241-50352260 | Msa0296800:CDS | 40.0% | |
| GCAAACCTGATGAGATTCTT+CGG | - | chr2_3:50352307-50352326 | None:intergenic | 40.0% | |
| GTGAATAAATCATCAGGCTC+CGG | + | chr2_3:50352392-50352411 | Msa0296800:intron | 40.0% | |
| AATAAACCTTGTTGCGTTGC+AGG | - | chr2_3:50352504-50352523 | None:intergenic | 40.0% | |
| TCAACTTATACGAGCTCTCA+AGG | - | chr2_3:50352812-50352831 | None:intergenic | 40.0% | |
| AGACCGTTTGAAAGAGCTTA+TGG | - | chr2_3:50352837-50352856 | None:intergenic | 40.0% | |
| ! | TTCCATTAATCAGATGGTGG+TGG | - | chr2_3:50352904-50352923 | None:intergenic | 40.0% |
| TCAACACACGTTCACGTTAA+AGG | + | chr2_3:50352967-50352986 | Msa0296800:intron | 40.0% | |
| ATTGAACTGCTGTAGTTTGG+GGG | + | chr2_3:50353057-50353076 | Msa0296800:intron | 40.0% | |
| ! | GGCCAAAGCATCAAAGAAAA+AGG | + | chr2_3:50353356-50353375 | Msa0296800:CDS | 40.0% |
| AAATGAACCAGTTTGCAACG+TGG | - | chr2_3:50353433-50353452 | None:intergenic | 40.0% | |
| CAAACTGTCATGCACATGAT+AGG | + | chr2_3:50353673-50353692 | Msa0296800:intron | 40.0% | |
| CAGTTAAAACCTGAAGGAAC+CGG | + | chr2_3:50353816-50353835 | Msa0296800:intron | 40.0% | |
| AATACGGACATTCACCTGTT+TGG | + | chr2_3:50353852-50353871 | Msa0296800:intron | 40.0% | |
| AACATCAAACCGTTCCAAAC+AGG | - | chr2_3:50353869-50353888 | None:intergenic | 40.0% | |
| GGGTAGGAGAGATAATACAA+AGG | + | chr2_3:50353959-50353978 | Msa0296800:intron | 40.0% | |
| AGAGAAAAGGGTCTCAATCT+CGG | - | chr2_3:50354014-50354033 | None:intergenic | 40.0% | |
| AGTAGAAAATCCACCAAGGA+GGG | - | chr2_3:50354096-50354115 | None:intergenic | 40.0% | |
| GAACAGTAGAAAATCCACCA+AGG | - | chr2_3:50354100-50354119 | None:intergenic | 40.0% | |
| CTTTGGCAAACAAACAGCTT+TGG | - | chr2_3:50354182-50354201 | None:intergenic | 40.0% | |
| CAAATCATTGTGCAGAGTCT+CGG | - | chr2_3:50354447-50354466 | None:intergenic | 40.0% | |
| ! | TCTTGAACTAGTGTTTTCCC+TGG | + | chr2_3:50354714-50354733 | Msa0296800:intron | 40.0% |
| !! | TATGCCTGCTTGTTATTCGA+TGG | + | chr2_3:50354772-50354791 | Msa0296800:intron | 40.0% |
| !! | ATGCCTGCTTGTTATTCGAT+GGG | + | chr2_3:50354773-50354792 | Msa0296800:intron | 40.0% |
| ACCTCCGCATTTCTGAATAA+CGG | - | chr2_3:50354898-50354917 | None:intergenic | 40.0% | |
| ! | GGAAAAGCACACGTTCATAT+AGG | + | chr2_3:50355017-50355036 | Msa0296800:intron | 40.0% |
| ! | TGATGAAGGTACACTTGAAG+AGG | + | chr2_3:50355125-50355144 | Msa0296800:CDS | 40.0% |
| AAGGCAAAATAAGGAGAGCA+AGG | - | chr2_3:50355229-50355248 | None:intergenic | 40.0% | |
| GGGTTATAATTGTAACCGTG+TGG | + | chr2_3:50355311-50355330 | Msa0296800:intron | 40.0% | |
| TATAATTGTAACCGTGTGGG+GGG | + | chr2_3:50355315-50355334 | Msa0296800:intron | 40.0% | |
| TCTGCAGCAAGATCTTCTAA+GGG | - | chr2_3:50355401-50355420 | None:intergenic | 40.0% | |
| TTCTGCAGCAAGATCTTCTA+AGG | - | chr2_3:50355402-50355421 | None:intergenic | 40.0% | |
| AGGTGATAGAGGGAATAGAT+TGG | - | chr2_3:50355478-50355497 | None:intergenic | 40.0% | |
| TCACACGATGAGTTATCCTT+CGG | + | chr2_3:50355794-50355813 | Msa0296800:intron | 40.0% | |
| ACATTCAATGTCCTCAGGAT+AGG | - | chr2_3:50355987-50356006 | None:intergenic | 40.0% | |
| !! | CTCGTAGACAAGTTTTATCG+GGG | + | chr2_3:50356113-50356132 | Msa0296800:intron | 40.0% |
| !! | TAGACAAGTTTTATCGGGGA+AGG | + | chr2_3:50356117-50356136 | Msa0296800:intron | 40.0% |
| !! | AGACAAGTTTTATCGGGGAA+GGG | + | chr2_3:50356118-50356137 | Msa0296800:intron | 40.0% |
| AAGGGAAAAACAGAGATGCT+TGG | + | chr2_3:50356136-50356155 | Msa0296800:intron | 40.0% | |
| CATGTCATAGAGTTTCGACT+GGG | + | chr2_3:50356859-50356878 | Msa0296800:intron | 40.0% | |
| ATAGCCTCATTATGCATAGC+CGG | - | chr2_3:50356941-50356960 | None:intergenic | 40.0% | |
| GCACCAACAAACCGTAAATA+GGG | - | chr2_3:50357114-50357133 | None:intergenic | 40.0% | |
| AGCACCAACAAACCGTAAAT+AGG | - | chr2_3:50357115-50357134 | None:intergenic | 40.0% | |
| TATCAATCGCATCACATCTC+TGG | + | chr2_3:50357232-50357251 | Msa0296800:CDS | 40.0% | |
| ! | ATCACATCTCTGGAAAGCAT+GGG | + | chr2_3:50357242-50357261 | Msa0296800:CDS | 40.0% |
| ! | GCCCATAACTTGCAACAATA+GGG | - | chr2_3:50357513-50357532 | None:intergenic | 40.0% |
| ! | AGCCCATAACTTGCAACAAT+AGG | - | chr2_3:50357514-50357533 | None:intergenic | 40.0% |
| !! | TATTTTGTCAGGTCGGCTTT+CGG | + | chr2_3:50357689-50357708 | Msa0296800:intron | 40.0% |
| TCCTCAGCATAATGAGTCTT+TGG | - | chr2_3:50357852-50357871 | None:intergenic | 40.0% | |
| TGCTGAGGACATTAGTAACA+TGG | + | chr2_3:50357863-50357882 | Msa0296800:CDS | 40.0% | |
| TGAGGACATTAGTAACATGG+AGG | + | chr2_3:50357866-50357885 | Msa0296800:CDS | 40.0% | |
| GAGATAACTGTCAACTGACA+TGG | + | chr2_3:50357888-50357907 | Msa0296800:exon | 40.0% | |
| TGAAACCAGTTTCAGACAGA+TGG | + | chr2_3:50358180-50358199 | Msa0296800:three_prime_UTR | 40.0% | |
| ! | TACTTCCATCTGTCTGAAAC+TGG | - | chr2_3:50358188-50358207 | None:intergenic | 40.0% |
| ! | CTGCAATGAGAAGTGTAGAG+AGG | - | chr2_3:50352221-50352240 | None:intergenic | 45.0% |
| ATGAGGATTGAGAATCGCGA+TGG | - | chr2_3:50352272-50352291 | None:intergenic | 45.0% | |
| TTCGGAGGAAGATGAAGATG+AGG | - | chr2_3:50352289-50352308 | None:intergenic | 45.0% | |
| TTCCTCCGAAGAATCTCATC+AGG | + | chr2_3:50352299-50352318 | Msa0296800:CDS | 45.0% | |
| AACCTGATGAGATTCTTCGG+AGG | - | chr2_3:50352304-50352323 | None:intergenic | 45.0% | |
| !! | CATTAATCAGATGGTGGTGG+TGG | - | chr2_3:50352901-50352920 | None:intergenic | 45.0% |
| CACCACCACCATCTGATTAA+TGG | + | chr2_3:50352899-50352918 | Msa0296800:intron | 45.0% | |
| GAAAGTGACAATGAAGCTGC+TGG | + | chr2_3:50353321-50353340 | Msa0296800:CDS | 45.0% | |
| AGGAACTCAAAAGGCAAGAG+AGG | + | chr2_3:50353376-50353395 | Msa0296800:CDS | 45.0% | |
| GGAACTCAAAAGGCAAGAGA+GGG | + | chr2_3:50353377-50353396 | Msa0296800:CDS | 45.0% | |
| !! | CGGTTCCTTCAGGTTTTAAC+TGG | - | chr2_3:50353818-50353837 | None:intergenic | 45.0% |
| CGTATTTACCAGCTCATGAC+CGG | - | chr2_3:50353838-50353857 | None:intergenic | 45.0% | |
| CGGTCATGAGCTGGTAAATA+CGG | + | chr2_3:50353836-50353855 | Msa0296800:intron | 45.0% | |
| GGACATTCACCTGTTTGGAA+CGG | + | chr2_3:50353857-50353876 | Msa0296800:intron | 45.0% | |
| !! | GGGTTTTGATGACACTCTCA+AGG | - | chr2_3:50354076-50354095 | None:intergenic | 45.0% |
| AGTGTCATCAAAACCCTCCT+TGG | + | chr2_3:50354080-50354099 | Msa0296800:intron | 45.0% | |
| CAGTAGAAAATCCACCAAGG+AGG | - | chr2_3:50354097-50354116 | None:intergenic | 45.0% | |
| !! | TGCCTGCTTGTTATTCGATG+GGG | + | chr2_3:50354774-50354793 | Msa0296800:intron | 45.0% |
| ! | TTGTTATTCGATGGGGGAGA+GGG | + | chr2_3:50354781-50354800 | Msa0296800:intron | 45.0% |
| TTTGAAAGGCCGAAGAAGCT+CGG | + | chr2_3:50354858-50354877 | Msa0296800:intron | 45.0% | |
| ACCGTTATTCAGAAATGCGG+AGG | + | chr2_3:50354894-50354913 | Msa0296800:CDS | 45.0% | |
| TTCAGAAATGCGGAGGTTGA+AGG | + | chr2_3:50354901-50354920 | Msa0296800:CDS | 45.0% | |
| GTGAGTCAACATCCTTGTTC+TGG | + | chr2_3:50354956-50354975 | Msa0296800:intron | 45.0% | |
| CCTGAGACTAAACCAGAACA+AGG | - | chr2_3:50354971-50354990 | None:intergenic | 45.0% | |
| !! | CCTTGTTCTGGTTTAGTCTC+AGG | + | chr2_3:50354968-50354987 | Msa0296800:intron | 45.0% |
| GCACACGTTCATATAGGAAG+AGG | + | chr2_3:50355023-50355042 | Msa0296800:intron | 45.0% | |
| AGAGGAAGCCAAAGCTCAAA+AGG | + | chr2_3:50355041-50355060 | Msa0296800:CDS | 45.0% | |
| AAGCCAAAGCTCAAAAGGCT+AGG | + | chr2_3:50355046-50355065 | Msa0296800:CDS | 45.0% | |
| AGCCAAAGCTCAAAAGGCTA+GGG | + | chr2_3:50355047-50355066 | Msa0296800:CDS | 45.0% | |
| !! | TTCCCTAGCCTTTTGAGCTT+TGG | - | chr2_3:50355052-50355071 | None:intergenic | 45.0% |
| CTGCGTTAGAGTTTGACAAG+TGG | + | chr2_3:50355082-50355101 | Msa0296800:CDS | 45.0% | |
| CATTAGGTTTCGATGCCCTA+TGG | - | chr2_3:50355279-50355298 | None:intergenic | 45.0% | |
| !! | CATAGGGCATCGAAACCTAA+TGG | + | chr2_3:50355277-50355296 | Msa0296800:intron | 45.0% |
| CAGTTATAAAACCCCCCACA+CGG | - | chr2_3:50355329-50355348 | None:intergenic | 45.0% | |
| TTGTGGGAGAAACAGTGTCA+CGG | + | chr2_3:50355562-50355581 | Msa0296800:intron | 45.0% | |
| ATGGCAGTGAGTGATCTAAG+TGG | - | chr2_3:50355880-50355899 | None:intergenic | 45.0% | |
| CTTAGATCACTCACTGCCAT+CGG | + | chr2_3:50355880-50355899 | Msa0296800:intron | 45.0% | |
| AGAAAGATCAGCCTATCCTG+AGG | + | chr2_3:50355973-50355992 | Msa0296800:intron | 45.0% | |
| GAGAGTCTACACAAGATCAG+AGG | + | chr2_3:50356257-50356276 | Msa0296800:intron | 45.0% | |
| AGTCTACACAAGATCAGAGG+TGG | + | chr2_3:50356260-50356279 | Msa0296800:intron | 45.0% | |
| CAGCAAGTAGTTAGACAGCT+TGG | - | chr2_3:50356532-50356551 | None:intergenic | 45.0% | |
| CCAGTCGAAACTCTATGACA+TGG | - | chr2_3:50356861-50356880 | None:intergenic | 45.0% | |
| CCATGTCATAGAGTTTCGAC+TGG | + | chr2_3:50356858-50356877 | Msa0296800:intron | 45.0% | |
| TAAAAGGGGAGGGTTGTGTT+AGG | - | chr2_3:50356906-50356925 | None:intergenic | 45.0% | |
| ! | ACACAACCCTCCCCTTTTAT+TGG | + | chr2_3:50356907-50356926 | Msa0296800:intron | 45.0% |
| ! | CACAACCCTCCCCTTTTATT+GGG | + | chr2_3:50356908-50356927 | Msa0296800:intron | 45.0% |
| ACTAAGTGGGGTCTGCTATA+TGG | - | chr2_3:50357017-50357036 | None:intergenic | 45.0% | |
| ATATAGCAGACCCCACTTAG+TGG | + | chr2_3:50357016-50357035 | Msa0296800:intron | 45.0% | |
| TATAGCAGACCCCACTTAGT+GGG | + | chr2_3:50357017-50357036 | Msa0296800:intron | 45.0% | |
| GAGCCCTATTTACGGTTTGT+TGG | + | chr2_3:50357108-50357127 | Msa0296800:intron | 45.0% | |
| ! | CATCACATCTCTGGAAAGCA+TGG | + | chr2_3:50357241-50357260 | Msa0296800:CDS | 45.0% |
| TAGATGCCATGTCATTCGCT+AGG | + | chr2_3:50357418-50357437 | Msa0296800:intron | 45.0% | |
| AGATGCCATGTCATTCGCTA+GGG | + | chr2_3:50357419-50357438 | Msa0296800:intron | 45.0% | |
| ACCTACGTACATGCTAGAGT+AGG | - | chr2_3:50357596-50357615 | None:intergenic | 45.0% | |
| TTTCTCACTTTGGGCTGTCT+AGG | + | chr2_3:50357642-50357661 | Msa0296800:intron | 45.0% | |
| TTCTCACTTTGGGCTGTCTA+GGG | + | chr2_3:50357643-50357662 | Msa0296800:intron | 45.0% | |
| !! | ATTTTGTCAGGTCGGCTTTC+GGG | + | chr2_3:50357690-50357709 | Msa0296800:intron | 45.0% |
| ! | TTTCGGGTGTCATGGATGAT+AGG | + | chr2_3:50357706-50357725 | Msa0296800:CDS | 45.0% |
| ! | TTCGGGTGTCATGGATGATA+GGG | + | chr2_3:50357707-50357726 | Msa0296800:CDS | 45.0% |
| GCCAAAGACTCATTATGCTG+AGG | + | chr2_3:50357848-50357867 | Msa0296800:CDS | 45.0% | |
| !! | AACAATTAAATAATATTTAA+TGG | - | chr2_3:50354655-50354674 | None:intergenic | 5.0% |
| TGGCGTTTCCATAGGTAGAG+TGG | - | chr2_3:50352252-50352271 | None:intergenic | 50.0% | |
| AATCGCGATGGCGTTTCCAT+AGG | - | chr2_3:50352260-50352279 | None:intergenic | 50.0% | |
| AAACCTTGTTGCGTTGCAGG+CGG | - | chr2_3:50352501-50352520 | None:intergenic | 50.0% | |
| CCAGTTTGCAACGTGGAATG+AGG | - | chr2_3:50353426-50353445 | None:intergenic | 50.0% | |
| CCTCATTCCACGTTGCAAAC+TGG | + | chr2_3:50353423-50353442 | Msa0296800:intron | 50.0% | |
| TTAGATAAAGGGGGGGGCAA+AGG | + | chr2_3:50353923-50353942 | Msa0296800:intron | 50.0% | |
| GGCAAAGGAGGAGGAAGAAT+GGG | + | chr2_3:50353938-50353957 | Msa0296800:intron | 50.0% | |
| GCAAAGGAGGAGGAAGAATG+GGG | + | chr2_3:50353939-50353958 | Msa0296800:intron | 50.0% | |
| GTCATCAAAACCCTCCTTGG+TGG | + | chr2_3:50354083-50354102 | Msa0296800:intron | 50.0% | |
| AAGGTTTCTGCTGGCACTCA+TGG | - | chr2_3:50354133-50354152 | None:intergenic | 50.0% | |
| GAGCAGAAGAAGGTTTCTGC+TGG | - | chr2_3:50354142-50354161 | None:intergenic | 50.0% | |
| AAGCGAGTGCAAGTCCTATG+AGG | + | chr2_3:50354297-50354316 | Msa0296800:intron | 50.0% | |
| !! | GCCTGCTTGTTATTCGATGG+GGG | + | chr2_3:50354775-50354794 | Msa0296800:intron | 50.0% |
| TCCCCCATCGAATAACAAGC+AGG | - | chr2_3:50354779-50354798 | None:intergenic | 50.0% | |
| !! | CTTGTTATTCGATGGGGGAG+AGG | + | chr2_3:50354780-50354799 | Msa0296800:intron | 50.0% |
| TGTTATTCGATGGGGGAGAG+GGG | + | chr2_3:50354782-50354801 | Msa0296800:intron | 50.0% | |
| CTTTGACTGCCGAGCTTCTT+CGG | - | chr2_3:50354870-50354889 | None:intergenic | 50.0% | |
| ! | GTTGAAGGATGAAGAGCGTG+AGG | + | chr2_3:50354916-50354935 | Msa0296800:CDS | 50.0% |
| AGCTCAAAAGGCTAGGGAAG+AGG | + | chr2_3:50355053-50355072 | Msa0296800:CDS | 50.0% | |
| AGGTACACTTGAAGAGGAGC+AGG | + | chr2_3:50355131-50355150 | Msa0296800:CDS | 50.0% | |
| TGTGGGAGAAACAGTGTCAC+GGG | + | chr2_3:50355563-50355582 | Msa0296800:intron | 50.0% | |
| TCTAAGTGGCCGATGGCTTA+TGG | - | chr2_3:50355866-50355885 | None:intergenic | 50.0% | |
| TGAGTGATCTAAGTGGCCGA+TGG | - | chr2_3:50355873-50355892 | None:intergenic | 50.0% | |
| GATATTAGTGGGATGGCCGA+TGG | - | chr2_3:50355899-50355918 | None:intergenic | 50.0% | |
| GACAGCTGACAACTCAGCAT+AGG | - | chr2_3:50356490-50356509 | None:intergenic | 50.0% | |
| CCAAGCCCAATAAAAGGGGA+GGG | - | chr2_3:50356916-50356935 | None:intergenic | 50.0% | |
| ! | CCTCCCCTTTTATTGGGCTT+GGG | + | chr2_3:50356914-50356933 | Msa0296800:intron | 50.0% |
| GGTCCCAAGCCCAATAAAAG+GGG | - | chr2_3:50356920-50356939 | None:intergenic | 50.0% | |
| CGGTCCCAAGCCCAATAAAA+GGG | - | chr2_3:50356921-50356940 | None:intergenic | 50.0% | |
| ! | CCTTTTATTGGGCTTGGGAC+CGG | + | chr2_3:50356919-50356938 | Msa0296800:intron | 50.0% |
| ! | AAGCCTTGTCCCACTAAGTG+GGG | - | chr2_3:50357029-50357048 | None:intergenic | 50.0% |
| ! | CAAGCCTTGTCCCACTAAGT+GGG | - | chr2_3:50357030-50357049 | None:intergenic | 50.0% |
| TCAAGCCCTAGCGAATGACA+TGG | - | chr2_3:50357427-50357446 | None:intergenic | 50.0% | |
| GCCTACTCTAGCATGTACGT+AGG | + | chr2_3:50357592-50357611 | Msa0296800:intron | 50.0% | |
| TCTCACTTTGGGCTGTCTAG+GGG | + | chr2_3:50357644-50357663 | Msa0296800:intron | 50.0% | |
| ! | TCGGGTGTCATGGATGATAG+GGG | + | chr2_3:50357708-50357727 | Msa0296800:CDS | 50.0% |
| CGTGCAGCAGGTTCTCTAAC+CGG | - | chr2_3:50352414-50352433 | None:intergenic | 55.0% | |
| ! | AGCTGCTGGTGATGAGCATG+AGG | + | chr2_3:50353335-50353354 | Msa0296800:CDS | 55.0% |
| ! | AGCTCATGACCGGTTCCTTC+AGG | - | chr2_3:50353828-50353847 | None:intergenic | 55.0% |
| TGAAGGAACCGGTCATGAGC+TGG | + | chr2_3:50353827-50353846 | Msa0296800:intron | 55.0% | |
| GGGCAAAGGAGGAGGAAGAA+TGG | + | chr2_3:50353937-50353956 | Msa0296800:intron | 55.0% | |
| AGGAGGAGGAAGAATGGGGT+AGG | + | chr2_3:50353943-50353962 | Msa0296800:intron | 55.0% | |
| TCTCGGCTGAGAGGCTACAA+TGG | - | chr2_3:50353997-50354016 | None:intergenic | 55.0% | |
| GCTCGAGAGTGAGCAGAAGA+AGG | - | chr2_3:50354152-50354171 | None:intergenic | 55.0% | |
| GTTATTCGATGGGGGAGAGG+GGG | + | chr2_3:50354783-50354802 | Msa0296800:intron | 55.0% | |
| TTATTCGATGGGGGAGAGGG+GGG | + | chr2_3:50354784-50354803 | Msa0296800:intron | 55.0% | |
| ! | TGAGGCACAGGAGCGTAAGT+TGG | + | chr2_3:50354934-50354953 | Msa0296800:CDS | 55.0% |
| ! | CCCTCCCCTTTTATTGGGCT+TGG | + | chr2_3:50356913-50356932 | Msa0296800:intron | 55.0% |
| CCCAAGCCCAATAAAAGGGG+AGG | - | chr2_3:50356917-50356936 | None:intergenic | 55.0% | |
| CCGGTCCCAAGCCCAATAAA+AGG | - | chr2_3:50356922-50356941 | None:intergenic | 55.0% | |
| GGGACCGGCTATGCATAATG+AGG | + | chr2_3:50356934-50356953 | Msa0296800:intron | 55.0% | |
| AGACCCCACTTAGTGGGACA+AGG | + | chr2_3:50357023-50357042 | Msa0296800:intron | 55.0% | |
| ! | CCAAGCCTTGTCCCACTAAG+TGG | - | chr2_3:50357031-50357050 | None:intergenic | 55.0% |
| CCACTTAGTGGGACAAGGCT+TGG | + | chr2_3:50357028-50357047 | Msa0296800:intron | 55.0% | |
| CAACCGTTCTCCGACGCATG+CGG | - | chr2_3:50352452-50352471 | None:intergenic | 60.0% | |
| GGCAAGAGAGGGAAGCTCGA+CGG | + | chr2_3:50353388-50353407 | Msa0296800:CDS | 60.0% | |
| GATAAAGGGGGGGGCAAAGG+AGG | + | chr2_3:50353926-50353945 | Msa0296800:intron | 60.0% | |
| GGGTCTCAATCTCGGCTGAG+AGG | - | chr2_3:50354006-50354025 | None:intergenic | 60.0% | |
| ! | GGATGAAGAGCGTGAGGCAC+AGG | + | chr2_3:50354922-50354941 | Msa0296800:CDS | 60.0% |
| ! | AGGTCGGCTTTCGGGTGTCA+TGG | + | chr2_3:50357698-50357717 | Msa0296800:intron | 60.0% |
| TCGCCGCATGCGTCGGAGAA+CGG | + | chr2_3:50352446-50352465 | Msa0296800:CDS | 65.0% | |
| CGTCGGAGAACGGTTGCGTC+TGG | + | chr2_3:50352456-50352475 | Msa0296800:CDS | 65.0% | |
| GCTCCGCCTGCAACGCAACA+AGG | + | chr2_3:50352495-50352514 | Msa0296800:CDS | 65.0% | |
| AGAGAGGGAAGCTCGACGGC+AGG | + | chr2_3:50353392-50353411 | Msa0296800:CDS | 65.0% | |
| AAAGGGGGGGGCAAAGGAGG+AGG | + | chr2_3:50353929-50353948 | Msa0296800:intron | 65.0% | |
| GTAGCGGTGGCACGTGCAGC+AGG | - | chr2_3:50352426-50352445 | None:intergenic | 70.0% | |
| ACGCATGCGGCGAGTAGCGG+TGG | - | chr2_3:50352439-50352458 | None:intergenic | 70.0% | |
| CCGACGCATGCGGCGAGTAG+CGG | - | chr2_3:50352442-50352461 | None:intergenic | 70.0% | |
| CCGCTACTCGCCGCATGCGT+CGG | + | chr2_3:50352439-50352458 | Msa0296800:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 50352099 | 50358287 | 50352099 | ID=Msa0296800;Name=Msa0296800 |
| chr2_3 | mRNA | 50352099 | 50358287 | 50352099 | ID=Msa0296800-mRNA-1;Parent=Msa0296800;Name=Msa0296800-mRNA-1;_AED=0.03;_eAED=0.03;_QI=96|1|1|1|1|1|8|382|295 |
| chr2_3 | exon | 50352099 | 50352320 | 50352099 | ID=Msa0296800-mRNA-1:exon:15795;Parent=Msa0296800-mRNA-1 |
| chr2_3 | exon | 50352408 | 50352516 | 50352408 | ID=Msa0296800-mRNA-1:exon:15796;Parent=Msa0296800-mRNA-1 |
| chr2_3 | exon | 50353310 | 50353413 | 50353310 | ID=Msa0296800-mRNA-1:exon:15797;Parent=Msa0296800-mRNA-1 |
| chr2_3 | exon | 50354866 | 50354955 | 50354866 | ID=Msa0296800-mRNA-1:exon:15798;Parent=Msa0296800-mRNA-1 |
| chr2_3 | exon | 50355039 | 50355197 | 50355039 | ID=Msa0296800-mRNA-1:exon:15799;Parent=Msa0296800-mRNA-1 |
| chr2_3 | exon | 50355383 | 50355439 | 50355383 | ID=Msa0296800-mRNA-1:exon:15800;Parent=Msa0296800-mRNA-1 |
| chr2_3 | exon | 50357227 | 50357263 | 50357227 | ID=Msa0296800-mRNA-1:exon:15801;Parent=Msa0296800-mRNA-1 |
| chr2_3 | exon | 50357700 | 50358287 | 50357700 | ID=Msa0296800-mRNA-1:exon:15802;Parent=Msa0296800-mRNA-1 |
| chr2_3 | five_prime_UTR | 50352099 | 50352194 | 50352099 | ID=Msa0296800-mRNA-1:five_prime_utr;Parent=Msa0296800-mRNA-1 |
| chr2_3 | CDS | 50352195 | 50352320 | 50352195 | ID=Msa0296800-mRNA-1:cds;Parent=Msa0296800-mRNA-1 |
| chr2_3 | CDS | 50352408 | 50352516 | 50352408 | ID=Msa0296800-mRNA-1:cds;Parent=Msa0296800-mRNA-1 |
| chr2_3 | CDS | 50353310 | 50353413 | 50353310 | ID=Msa0296800-mRNA-1:cds;Parent=Msa0296800-mRNA-1 |
| chr2_3 | CDS | 50354866 | 50354955 | 50354866 | ID=Msa0296800-mRNA-1:cds;Parent=Msa0296800-mRNA-1 |
| chr2_3 | CDS | 50355039 | 50355197 | 50355039 | ID=Msa0296800-mRNA-1:cds;Parent=Msa0296800-mRNA-1 |
| chr2_3 | CDS | 50355383 | 50355439 | 50355383 | ID=Msa0296800-mRNA-1:cds;Parent=Msa0296800-mRNA-1 |
| chr2_3 | CDS | 50357227 | 50357263 | 50357227 | ID=Msa0296800-mRNA-1:cds;Parent=Msa0296800-mRNA-1 |
| chr2_3 | CDS | 50357700 | 50357905 | 50357700 | ID=Msa0296800-mRNA-1:cds;Parent=Msa0296800-mRNA-1 |
| chr2_3 | three_prime_UTR | 50357906 | 50358287 | 50357906 | ID=Msa0296800-mRNA-1:three_prime_utr;Parent=Msa0296800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
