AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0299170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0299170 MtrunA17_Chr2g0323331 68.733 371 40 6 87 410 5 346 2.15e-165 469
Msa0299170 MtrunA17_Chr2g0323331 50.932 161 60 2 136 296 221 362 1.58e-36 137
Msa0299170 MtrunA17_Chr2g0323351 66.372 226 58 6 1 211 1 223 1.84e-97 291
Msa0299170 MtrunA17_Chr2g0323351 57.143 91 31 3 214 300 137 223 4.68e-14 71.6
Msa0299170 MtrunA17_Chr2g0323351 63.095 84 23 5 302 380 146 226 2.03e-11 63.9
Msa0299170 MtrunA17_Chr4g0022901 50.201 249 86 6 1 212 1 248 4.45e-77 240
Msa0299170 MtrunA17_Chr4g0022931 45.907 281 101 8 1 258 1 253 3.24e-69 220
Msa0299170 MtrunA17_Chr4g0022911 52.970 202 87 4 1 200 1 196 2.98e-67 215
Msa0299170 MtrunA17_Chr2g0323321 91.209 91 8 0 1 91 1 91 3.33e-62 196
Msa0299170 MtrunA17_Chr4g0022881 45.622 217 102 5 1 209 1 209 2.78e-55 182
Msa0299170 MtrunA17_Chr1g0167691 56.579 152 57 2 1 143 1 152 4.59e-54 180
Msa0299170 MtrunA17_Chr1g0187761 46.047 215 94 5 1 209 1 199 1.48e-53 179
Msa0299170 MtrunA17_Chr1g0167661 59.441 143 49 2 1 134 1 143 1.74e-53 178
Msa0299170 MtrunA17_Chr4g0022891 43.805 226 101 9 1 209 1 217 8.96e-53 176
Msa0299170 MtrunA17_Chr2g0281071 65.546 119 39 1 1 117 1 119 6.98e-52 177
Msa0299170 MtrunA17_Chr4g0048511 63.866 119 41 1 1 117 1 119 1.98e-51 176
Msa0299170 MtrunA17_Chr7g0274581 54.730 148 58 2 1 147 1 140 2.63e-50 169
Msa0299170 MtrunA17_Chr7g0261281 59.259 135 49 2 1 129 1 135 2.81e-50 171
Msa0299170 MtrunA17_Chr3g0115821 61.864 118 44 1 1 117 1 118 4.46e-50 172
Msa0299170 MtrunA17_Chr2g0323411 63.559 118 42 1 1 117 1 118 2.79e-49 170
Msa0299170 MtrunA17_Chr6g0453471 63.559 118 42 1 1 117 1 118 7.92e-49 169
Msa0299170 MtrunA17_Chr4g0042671 63.559 118 42 1 1 117 1 118 1.50e-48 170
Msa0299170 MtrunA17_Chr7g0217741 63.559 118 42 1 1 117 1 118 2.16e-48 167
Msa0299170 MtrunA17_Chr1g0203411 58.537 123 50 1 1 122 1 123 2.70e-48 166
Msa0299170 MtrunA17_Chr1g0211161 64.486 107 38 0 11 117 13 119 1.36e-47 162
Msa0299170 MtrunA17_Chr4g0058631 62.500 112 42 0 6 117 7 118 2.20e-47 166
Msa0299170 MtrunA17_Chr4g0057031 61.864 118 44 1 1 117 1 118 2.21e-47 163
Msa0299170 MtrunA17_Chr4g0039971 60.169 118 46 1 1 117 2 119 3.17e-47 165
Msa0299170 MtrunA17_Chr3g0117091 63.551 107 39 0 11 117 12 118 5.52e-47 164
Msa0299170 MtrunA17_Chr5g0410961 60.169 118 46 1 1 117 1 118 6.31e-47 164
Msa0299170 MtrunA17_Chr1g0193371 49.383 162 64 3 6 167 7 150 1.12e-46 164
Msa0299170 MtrunA17_Chr8g0349261 63.025 119 41 2 1 116 1 119 2.03e-46 161
Msa0299170 MtrunA17_Chr4g0070611 49.112 169 73 2 1 156 1 169 2.18e-46 161
Msa0299170 MtrunA17_Chr5g0395281 59.322 118 47 1 1 117 1 118 2.64e-46 161
Msa0299170 MtrunA17_Chr3g0110351 61.864 118 44 1 1 117 1 118 5.03e-46 160
Msa0299170 MtrunA17_Chr7g0228891 60.345 116 45 1 1 115 1 116 6.32e-46 159
Msa0299170 MtrunA17_Chr4g0068061 60.656 122 47 1 1 121 1 122 6.82e-46 161
Msa0299170 MtrunA17_Chr3g0103281 58.621 116 47 1 1 115 1 116 9.38e-46 160
Msa0299170 MtrunA17_Chr5g0434571 61.017 118 45 1 1 117 37 154 1.28e-45 161
Msa0299170 MtrunA17_Chr4g0037141 58.120 117 48 1 1 116 1 117 1.31e-45 159
Msa0299170 MtrunA17_Chr5g0435101 58.120 117 49 0 1 117 1 117 1.95e-45 156
Msa0299170 MtrunA17_Chr8g0346561 59.016 122 49 1 1 121 1 122 4.57e-45 158
Msa0299170 MtrunA17_Chr1g0193801 60.909 110 43 0 6 115 7 116 6.13e-45 160
Msa0299170 MtrunA17_Chr2g0309911 59.459 111 45 0 6 116 6 116 7.06e-45 157
Msa0299170 MtrunA17_Chr8g0342541 58.559 111 46 0 6 116 7 117 7.84e-45 159
Msa0299170 MtrunA17_Chr4g0070641 60.345 116 45 1 1 115 1 116 8.73e-45 153
Msa0299170 MtrunA17_Chr7g0270891 60.909 110 43 0 6 115 7 116 1.09e-44 159
Msa0299170 MtrunA17_Chr3g0131121 52.985 134 62 1 1 133 1 134 1.88e-44 156
Msa0299170 MtrunA17_Chr2g0311221 63.889 108 38 1 3 109 5 112 2.34e-44 157
Msa0299170 MtrunA17_Chr7g0275911 58.621 116 47 1 1 115 1 116 2.92e-44 154
Msa0299170 MtrunA17_Chr8g0342521 57.658 111 47 0 6 116 7 117 3.95e-44 157
Msa0299170 MtrunA17_Chr7g0217221 58.824 119 48 1 1 118 1 119 5.63e-44 154
Msa0299170 MtrunA17_Chr2g0330041 58.559 111 46 0 6 116 7 117 6.29e-44 157
Msa0299170 MtrunA17_Chr5g0417821 62.963 108 40 0 10 117 6 113 1.39e-43 154
Msa0299170 MtrunA17_Chr2g0328771 62.162 111 41 1 11 121 20 129 2.84e-43 154
Msa0299170 MtrunA17_Chr4g0044421 63.810 105 38 0 13 117 14 118 3.03e-43 150
Msa0299170 MtrunA17_Chr3g0121241 58.559 111 46 0 6 116 37 147 4.35e-43 152
Msa0299170 MtrunA17_Chr8g0385321 56.897 116 49 1 1 115 1 116 6.14e-43 152
Msa0299170 MtrunA17_Chr1g0152011 43.114 167 90 4 1 165 1 164 6.69e-43 153
Msa0299170 MtrunA17_Chr3g0092401 58.475 118 48 1 1 117 2 119 7.70e-43 152
Msa0299170 MtrunA17_Chr8g0342481 57.895 114 43 2 6 116 7 118 1.20e-42 154
Msa0299170 MtrunA17_Chr6g0452271 55.932 118 51 1 1 117 1 118 1.38e-42 152
Msa0299170 MtrunA17_Chr1g0151941 53.719 121 54 2 1 119 1 121 1.45e-42 150
Msa0299170 MtrunA17_Chr1g0194951 59.483 116 46 1 1 115 1 116 2.04e-42 153
Msa0299170 MtrunA17_Chr4g0032401 61.607 112 42 1 8 119 14 124 2.70e-42 151
Msa0299170 MtrunA17_Chr5g0400821 52.713 129 58 3 1 126 1 129 5.06e-42 150
Msa0299170 MtrunA17_Chr8g0387421 55.752 113 50 0 6 118 7 119 6.07e-42 150
Msa0299170 MtrunA17_Chr7g0271241 62.745 102 38 0 6 107 7 108 1.53e-41 150
Msa0299170 MtrunA17_Chr3g0088461 61.905 105 40 0 11 115 22 126 2.55e-41 149
Msa0299170 MtrunA17_Chr1g0180391 61.538 104 40 0 11 114 19 122 3.00e-41 145
Msa0299170 MtrunA17_Chr6g0453211 59.091 110 44 1 1 109 1 110 5.26e-41 147
Msa0299170 MtrunA17_Chr1g0209661 38.525 244 112 5 9 232 25 250 5.56e-41 147
Msa0299170 MtrunA17_Chr1g0203441 59.259 108 44 0 12 119 14 121 6.22e-41 146
Msa0299170 MtrunA17_Chr3g0135311 51.799 139 64 3 1 136 1 139 7.10e-41 148
Msa0299170 MtrunA17_Chr4g0060721 54.918 122 54 1 1 121 2 123 8.82e-41 147
Msa0299170 MtrunA17_Chr4g0028311 54.237 118 52 2 1 116 1 118 9.77e-41 147
Msa0299170 MtrunA17_Chr7g0264641 55.932 118 50 2 1 116 1 118 1.36e-40 145
Msa0299170 MtrunA17_Chr5g0397231 57.692 104 44 0 6 109 7 110 1.78e-40 147
Msa0299170 MtrunA17_Chr7g0254411 56.780 118 50 1 1 117 1 118 4.48e-40 145
Msa0299170 MtrunA17_Chr5g0434931 57.009 107 46 0 10 116 34 140 6.27e-40 144
Msa0299170 MtrunA17_Chr5g0434911 54.955 111 50 0 6 116 16 126 8.18e-40 143
Msa0299170 MtrunA17_Chr4g0055981 56.731 104 45 0 11 114 55 158 2.04e-39 141
Msa0299170 MtrunA17_Chr8g0343831 54.237 118 51 1 1 118 1 115 2.34e-39 141
Msa0299170 MtrunA17_Chr1g0186061 60.194 103 41 0 12 114 21 123 6.41e-39 140
Msa0299170 MtrunA17_Chr2g0327351 55.856 111 47 2 1 109 1 111 1.13e-38 141
Msa0299170 MtrunA17_Chr6g0470971 56.604 106 46 0 12 117 15 120 1.28e-38 140
Msa0299170 MtrunA17_Chr7g0228231 57.143 105 45 0 11 115 14 118 5.79e-38 136
Msa0299170 MtrunA17_Chr7g0228991 57.009 107 46 0 10 116 28 134 8.03e-38 138
Msa0299170 MtrunA17_Chr6g0487491 51.587 126 51 3 1 116 1 126 1.14e-37 137
Msa0299170 MtrunA17_Chr4g0054391 55.046 109 47 2 1 107 1 109 1.25e-37 138
Msa0299170 MtrunA17_Chr3g0099131 56.731 104 45 0 11 114 41 144 1.57e-37 142
Msa0299170 MtrunA17_Chr7g0240821 58.416 101 42 0 15 115 5 105 1.77e-37 135
Msa0299170 MtrunA17_Chr5g0434831 57.009 107 46 0 10 116 6 112 2.04e-37 134
Msa0299170 MtrunA17_Chr8g0360111 57.282 103 44 0 9 111 23 125 2.15e-37 136
Msa0299170 MtrunA17_Chr7g0269831 59.483 116 46 1 1 115 1 116 2.42e-37 139
Msa0299170 MtrunA17_Chr6g0450101 52.542 118 53 1 1 115 1 118 2.63e-37 134
Msa0299170 MtrunA17_Chr1g0168661 58.252 103 43 0 12 114 22 124 3.33e-37 135
Msa0299170 MtrunA17_Chr3g0080861 55.769 104 46 0 11 114 37 140 4.38e-37 141
Msa0299170 MtrunA17_Chr5g0434841 56.075 107 47 0 10 116 19 125 5.84e-37 137
Msa0299170 MtrunA17_Chr8g0354661 56.731 104 45 0 11 114 37 140 7.65e-37 141
Msa0299170 MtrunA17_Chr1g0194291 45.625 160 69 3 10 169 20 161 1.26e-36 134
Msa0299170 MtrunA17_Chr1g0154031 54.128 109 50 0 11 119 76 184 2.67e-36 137
Msa0299170 MtrunA17_Chr7g0220341 54.128 109 48 1 10 116 24 132 3.50e-36 134
Msa0299170 MtrunA17_Chr4g0072751 54.054 111 49 2 1 109 1 111 5.76e-36 135
Msa0299170 MtrunA17_Chr1g0194301 53.846 104 48 0 11 114 33 136 6.71e-36 133
Msa0299170 MtrunA17_Chr2g0327821 45.522 134 70 1 11 144 6 136 1.55e-34 128
Msa0299170 MtrunA17_Chr2g0322521 58.095 105 44 0 10 114 28 132 5.47e-34 130
Msa0299170 MtrunA17_Chr4g0042611 61.364 88 33 1 1 87 1 88 8.06e-34 121
Msa0299170 MtrunA17_Chr4g0030881 49.138 116 52 1 12 120 8 123 3.34e-33 125
Msa0299170 MtrunA17_Chr2g0294811 59.783 92 36 1 1 91 1 92 7.48e-33 120
Msa0299170 MtrunA17_Chr2g0293911 49.587 121 60 1 11 131 24 143 2.60e-32 124
Msa0299170 MtrunA17_Chr7g0247131 68.919 74 23 0 42 115 9 82 1.17e-31 121
Msa0299170 MtrunA17_Chr8g0342531 59.036 83 34 0 6 88 7 89 3.05e-31 117
Msa0299170 MtrunA17_Chr4g0068921 48.000 125 64 1 7 131 20 143 3.76e-31 117
Msa0299170 MtrunA17_Chr1g0192411 48.148 108 56 0 7 114 8 115 5.14e-31 122
Msa0299170 MtrunA17_Chr8g0334881 50.926 108 52 1 7 113 6 113 1.92e-30 119
Msa0299170 MtrunA17_Chr8g0342511 56.790 81 35 0 6 86 7 87 1.93e-30 112
Msa0299170 MtrunA17_Chr5g0395221 57.955 88 36 1 1 87 1 88 1.95e-30 112
Msa0299170 MtrunA17_Chr5g0440761 47.573 103 53 1 12 113 13 115 3.48e-30 117
Msa0299170 MtrunA17_Chr5g0441141 47.573 103 53 1 12 113 13 115 4.08e-30 117
Msa0299170 MtrunA17_Chr5g0440781 47.573 103 53 1 12 113 13 115 5.75e-30 114
Msa0299170 MtrunA17_Chr5g0429661 40.994 161 78 5 11 168 120 266 8.26e-30 118
Msa0299170 MtrunA17_Chr8g0342461 56.322 87 33 2 6 89 7 91 2.28e-29 111
Msa0299170 MtrunA17_Chr8g0342471 55.172 87 34 2 6 89 7 91 9.94e-29 109
Msa0299170 MtrunA17_Chr4g0008551 47.706 109 54 2 13 120 38 144 3.32e-28 114
Msa0299170 MtrunA17_Chr5g0441131 46.602 103 54 1 12 113 10 112 3.61e-28 109
Msa0299170 MtrunA17_Chr3g0133601 50.980 102 49 1 13 114 37 137 7.74e-28 110
Msa0299170 MtrunA17_Chr3g0099141 54.023 87 40 0 7 93 36 122 1.43e-27 106
Msa0299170 MtrunA17_Chr4g0013361 46.789 109 56 2 11 118 10 117 2.37e-27 110
Msa0299170 MtrunA17_Chr4g0053431 48.113 106 46 2 13 114 5 105 2.47e-27 109
Msa0299170 MtrunA17_Chr6g0454921 50.485 103 48 2 13 114 15 115 1.56e-26 105
Msa0299170 MtrunA17_Chr3g0117511 43.103 116 59 3 13 127 183 292 5.13e-26 109
Msa0299170 MtrunA17_Chr4g0042501 45.217 115 60 2 13 126 105 217 7.49e-26 108
Msa0299170 MtrunA17_Chr5g0417621 43.697 119 64 2 13 130 134 250 1.03e-25 108
Msa0299170 MtrunA17_Chr4g0058991 45.283 106 55 2 13 117 209 312 1.58e-25 107
Msa0299170 MtrunA17_Chr5g0401731 46.602 103 52 2 13 114 15 115 1.81e-25 105
Msa0299170 MtrunA17_Chr5g0434901 63.235 68 25 0 45 112 7 74 1.86e-25 100
Msa0299170 MtrunA17_Chr6g0480581 50.000 102 48 2 13 113 4 103 5.59e-25 102
Msa0299170 MtrunA17_Chr7g0229131 36.538 156 79 4 42 178 3 157 9.82e-25 99.8
Msa0299170 MtrunA17_Chr6g0453751 48.936 94 39 2 8 92 17 110 1.68e-24 97.8
Msa0299170 MtrunA17_Chr7g0228531 47.321 112 55 3 13 124 220 327 2.08e-24 104
Msa0299170 MtrunA17_Chr7g0229101 59.155 71 29 0 42 112 3 73 3.12e-24 99.8
Msa0299170 MtrunA17_Chr7g0238631 45.872 109 56 2 8 115 108 214 4.36e-24 104
Msa0299170 MtrunA17_Chr7g0238631 34.000 100 64 2 13 111 61 159 3.11e-13 71.2
Msa0299170 MtrunA17_Chr3g0139671 42.202 109 60 2 8 115 80 186 1.22e-22 100
Msa0299170 MtrunA17_Chr3g0139671 35.000 100 63 2 13 111 33 131 3.62e-13 71.6
Msa0299170 MtrunA17_Chr3g0125801 35.821 201 105 9 7 188 10 205 2.09e-22 96.7
Msa0299170 MtrunA17_Chr1g0157731 42.202 109 60 2 8 115 86 192 3.20e-22 99.4
Msa0299170 MtrunA17_Chr1g0157731 34.000 100 64 2 13 111 39 137 1.13e-13 73.2
Msa0299170 MtrunA17_Chr5g0437321 45.794 107 54 3 7 111 12 116 3.25e-22 95.9
Msa0299170 MtrunA17_Chr5g0425591 48.780 82 41 1 12 92 10 91 7.28e-22 89.4
Msa0299170 MtrunA17_Chr7g0254261 44.348 115 61 2 13 126 89 201 7.64e-22 95.9
Msa0299170 MtrunA17_Chr7g0228481 43.750 112 59 3 13 124 220 327 8.82e-22 96.7
Msa0299170 MtrunA17_Chr6g0460661 41.748 103 57 2 13 114 16 116 1.07e-21 91.3
Msa0299170 MtrunA17_Chr3g0093811 52.703 74 35 0 42 115 13 86 2.49e-21 92.8
Msa0299170 MtrunA17_Chr5g0397841 45.000 100 54 1 8 107 105 203 1.56e-20 93.6
Msa0299170 MtrunA17_Chr6g0460671 40.870 115 62 3 13 123 99 211 3.87e-20 90.9
Msa0299170 MtrunA17_Chr7g0233061 37.815 119 66 4 13 129 180 292 5.05e-20 90.9
Msa0299170 MtrunA17_Chr7g0228401 40.952 105 58 3 24 128 290 390 2.40e-19 90.1
Msa0299170 MtrunA17_Chr1g0177901 44.156 77 42 1 36 112 17 92 3.43e-17 79.7
Msa0299170 MtrunA17_Chr7g0238651 34.058 138 78 3 16 151 10 136 1.63e-16 80.5
Msa0299170 MtrunA17_Chr8g0362231 39.286 112 65 2 15 125 24 133 1.07e-15 78.6
Msa0299170 MtrunA17_Chr5g0416341 39.604 101 58 2 15 114 28 126 2.31e-15 77.8
Msa0299170 MtrunA17_Chr1g0193901 45.977 87 45 2 8 92 8 94 5.63e-14 68.2
Msa0299170 MtrunA17_Chr1g0193891 45.977 87 45 2 8 92 8 94 5.63e-14 68.2
Msa0299170 MtrunA17_Chr1g0193871 45.977 87 45 2 8 92 8 94 5.63e-14 68.2
Msa0299170 MtrunA17_Chr1g0193881 45.977 87 45 2 8 92 8 94 5.63e-14 68.2
Msa0299170 MtrunA17_Chr5g0434871 56.818 44 19 0 73 116 2 45 6.78e-13 63.5
Msa0299170 MtrunA17_Chr5g0421201 48.980 49 25 0 69 117 15 63 3.21e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0299170 AT3G23250.1 42.152 223 107 5 1 202 1 222 1.63e-53 180
Msa0299170 AT4G28110.1 63.025 119 43 1 1 118 1 119 5.32e-52 176
Msa0299170 AT2G31180.1 66.667 120 39 1 1 119 1 120 1.22e-51 174
Msa0299170 AT5G16770.4 63.559 118 42 1 1 117 1 118 5.51e-51 174
Msa0299170 AT5G16770.3 63.559 118 42 1 1 117 1 118 5.51e-51 174
Msa0299170 AT5G15310.1 65.254 118 40 1 1 117 1 118 1.34e-50 174
Msa0299170 AT5G16770.1 63.559 118 42 1 1 117 1 118 1.42e-50 174
Msa0299170 AT5G16770.2 63.559 118 42 1 1 117 1 118 1.42e-50 174
Msa0299170 AT4G21440.1 61.864 118 44 1 1 117 1 118 1.77e-50 174
Msa0299170 AT5G15310.2 65.254 118 40 1 1 117 1 118 2.07e-50 172
Msa0299170 AT5G07700.1 52.071 169 77 2 3 171 4 168 2.94e-50 173
Msa0299170 AT5G07700.2 52.071 169 77 2 3 171 4 168 2.94e-50 173
Msa0299170 AT5G15310.4 65.254 118 40 1 1 117 1 118 3.58e-50 170
Msa0299170 AT3G01140.2 65.254 118 40 1 1 117 1 118 4.29e-50 173
Msa0299170 AT4G05100.1 63.025 119 42 1 1 117 1 119 1.13e-49 171
Msa0299170 AT1G06180.1 65.517 116 39 1 1 115 1 116 4.19e-49 167
Msa0299170 AT3G01140.1 64.407 118 41 1 1 117 44 161 5.07e-49 171
Msa0299170 AT1G16490.1 63.158 114 41 1 3 115 5 118 6.31e-49 167
Msa0299170 AT3G02940.2 61.864 118 44 1 1 117 1 118 8.28e-49 168
Msa0299170 AT1G74080.1 64.407 118 41 1 1 117 1 118 9.61e-49 169
Msa0299170 AT3G02940.1 61.864 118 44 1 1 117 1 118 2.03e-48 167
Msa0299170 AT3G02940.3 61.864 118 44 1 1 117 1 118 2.03e-48 167
Msa0299170 AT3G61250.1 63.248 117 42 1 1 116 1 117 2.37e-48 167
Msa0299170 AT5G60890.1 62.931 116 42 1 1 115 1 116 4.69e-48 166
Msa0299170 AT5G10280.1 61.017 118 45 1 1 117 1 118 5.89e-48 167
Msa0299170 AT1G34670.1 61.864 118 44 1 1 117 1 118 5.93e-48 167
Msa0299170 AT1G18570.1 63.025 119 42 1 1 117 1 119 6.90e-48 167
Msa0299170 AT1G79180.1 61.538 117 44 1 3 118 5 121 1.05e-47 165
Msa0299170 AT1G74430.1 63.393 112 41 0 7 118 8 119 2.05e-47 163
Msa0299170 AT5G07690.1 58.209 134 54 2 1 132 1 134 2.90e-47 165
Msa0299170 AT5G61420.2 61.017 118 45 1 1 117 1 118 2.98e-47 166
Msa0299170 AT5G65230.1 61.864 118 44 1 1 117 1 118 3.11e-47 164
Msa0299170 AT4G38620.1 58.974 117 47 1 1 116 1 117 1.66e-46 161
Msa0299170 AT1G22640.1 58.120 117 48 1 1 116 1 117 1.68e-46 160
Msa0299170 AT4G17785.2 57.983 119 48 1 1 117 1 119 1.71e-46 163
Msa0299170 AT4G17785.1 57.983 119 48 1 1 117 1 119 2.10e-46 163
Msa0299170 AT5G14750.1 45.312 192 100 4 8 196 13 202 2.59e-46 158
Msa0299170 AT4G22680.1 61.017 118 45 1 1 117 1 118 4.38e-46 160
Msa0299170 AT5G16600.1 61.864 118 44 1 1 117 1 118 2.07e-45 160
Msa0299170 AT2G16720.1 57.265 117 49 1 1 116 1 117 2.51e-45 158
Msa0299170 AT5G26660.1 51.748 143 60 1 6 148 7 140 2.53e-45 160
Msa0299170 AT5G54230.1 62.617 107 40 0 11 117 12 118 2.84e-45 159
Msa0299170 AT1G56160.1 60.526 114 44 1 3 115 5 118 2.88e-45 159
Msa0299170 AT4G34990.1 57.627 118 49 1 1 117 1 118 3.26e-45 158
Msa0299170 AT4G09460.1 58.120 117 48 1 1 116 1 117 4.31e-45 156
Msa0299170 AT1G35515.1 57.265 117 49 1 1 116 1 117 4.43e-45 155
Msa0299170 AT4G12350.1 60.169 118 46 1 1 117 1 118 5.59e-45 157
Msa0299170 AT1G66230.1 60.169 118 46 1 1 117 1 118 6.48e-45 157
Msa0299170 AT4G01680.3 61.818 110 42 0 6 115 7 116 7.90e-45 155
Msa0299170 AT1G57560.1 58.036 112 47 0 6 117 7 118 9.00e-45 158
Msa0299170 AT1G57560.2 58.036 112 47 0 6 117 7 118 9.49e-45 157
Msa0299170 AT3G12820.1 58.621 116 47 1 3 117 5 120 9.93e-45 155
Msa0299170 AT5G56110.1 58.621 116 47 1 1 115 1 116 1.25e-44 157
Msa0299170 AT3G12720.1 55.856 111 49 0 6 116 17 127 2.55e-44 156
Msa0299170 AT1G18710.1 60.550 109 43 0 7 115 8 116 2.60e-44 155
Msa0299170 AT4G01680.1 61.818 110 42 0 6 115 7 116 2.77e-44 157
Msa0299170 AT3G13540.1 55.172 116 51 1 4 118 15 130 7.79e-44 153
Msa0299170 AT5G62320.1 45.833 168 74 4 3 162 4 162 1.71e-43 152
Msa0299170 AT3G13890.2 57.658 111 47 0 6 116 7 117 2.16e-43 155
Msa0299170 AT3G62610.1 58.621 116 47 1 1 115 1 116 2.27e-43 155
Msa0299170 AT5G35550.1 55.385 130 58 0 11 140 14 143 3.10e-43 152
Msa0299170 AT1G09540.1 49.286 140 60 1 6 145 7 135 6.17e-43 154
Msa0299170 AT3G28470.1 60.000 110 43 1 1 109 1 110 1.41e-42 152
Msa0299170 AT5G14340.1 57.759 116 48 1 1 115 13 128 1.63e-42 150
Msa0299170 AT3G47600.1 57.627 118 49 1 1 117 1 118 1.69e-42 152
Msa0299170 AT5G49330.1 58.621 116 47 1 1 115 1 116 2.59e-42 152
Msa0299170 AT3G28910.1 58.475 118 48 1 1 117 1 118 3.27e-42 151
Msa0299170 AT2G47460.1 56.034 116 50 1 1 115 1 116 9.88e-42 151
Msa0299170 AT5G62470.2 45.614 171 91 2 1 169 1 171 1.01e-41 150
Msa0299170 AT5G57620.1 54.098 122 54 2 1 120 1 122 1.08e-41 150
Msa0299170 AT1G63910.1 56.250 112 49 0 6 117 7 118 1.27e-41 151
Msa0299170 AT5G40330.1 60.577 104 41 0 12 115 13 116 1.48e-41 146
Msa0299170 AT3G27920.1 52.941 119 56 0 3 121 6 124 2.55e-41 146
Msa0299170 AT1G74650.1 57.265 117 49 1 1 116 1 117 4.14e-41 149
Msa0299170 AT1G08810.1 55.556 126 55 1 1 125 1 126 4.33e-41 147
Msa0299170 AT1G79180.2 47.333 150 45 2 3 118 5 154 4.56e-41 148
Msa0299170 AT4G01680.2 55.738 122 42 1 6 115 7 128 7.66e-41 148
Msa0299170 AT3G49690.1 55.932 118 50 2 1 116 1 118 7.71e-41 147
Msa0299170 AT5G23000.1 53.390 118 53 2 1 116 1 118 1.92e-40 147
Msa0299170 AT5G12870.1 58.879 107 44 0 11 117 18 124 2.23e-40 145
Msa0299170 AT3G13890.1 53.333 120 47 1 6 116 7 126 2.53e-40 147
Msa0299170 AT5G62470.1 45.614 171 90 3 1 169 1 170 4.20e-40 146
Msa0299170 AT4G37780.1 51.181 127 56 3 1 125 1 123 5.65e-40 145
Msa0299170 AT3G08500.1 60.952 105 41 0 11 115 30 134 1.26e-39 145
Msa0299170 AT5G06100.1 54.464 112 51 0 3 114 24 135 2.31e-39 147
Msa0299170 AT5G65790.1 54.237 118 52 2 1 116 1 118 3.20e-39 144
Msa0299170 AT2G32460.2 60.000 105 42 0 10 114 5 109 4.07e-39 146
Msa0299170 AT2G32460.1 58.333 108 45 0 7 114 14 121 4.26e-39 147
Msa0299170 AT5G06100.5 54.464 112 51 0 3 114 24 135 7.30e-39 146
Msa0299170 AT5G06100.2 54.464 112 51 0 3 114 24 135 7.30e-39 146
Msa0299170 AT5G06100.3 54.464 112 51 0 3 114 24 135 7.30e-39 146
Msa0299170 AT5G06100.4 54.464 112 51 0 3 114 24 135 7.30e-39 146
Msa0299170 AT3G11440.2 38.647 207 103 5 6 192 32 234 9.71e-39 145
Msa0299170 AT2G36890.1 52.893 121 55 2 1 119 1 121 1.14e-38 141
Msa0299170 AT2G36890.2 54.237 118 52 2 1 116 42 159 1.76e-38 142
Msa0299170 AT3G11440.3 39.394 198 100 4 11 192 41 234 2.91e-38 145
Msa0299170 AT3G11440.4 39.394 198 100 4 11 192 41 234 2.91e-38 145
Msa0299170 AT3G11440.1 39.394 198 100 4 11 192 41 234 2.91e-38 145
Msa0299170 AT3G30210.1 44.086 186 75 3 10 182 26 195 7.50e-38 138
Msa0299170 AT5G40350.1 57.009 107 46 0 11 117 17 123 7.74e-38 136
Msa0299170 AT3G27810.1 57.944 107 44 1 11 117 20 125 8.63e-38 137
Msa0299170 AT5G52260.1 57.944 107 45 0 12 118 13 119 1.18e-37 137
Msa0299170 AT3G24310.1 59.048 105 43 0 10 114 17 121 1.28e-37 137
Msa0299170 AT4G26930.1 57.282 103 44 0 11 113 19 121 1.46e-37 140
Msa0299170 AT4G13480.1 60.194 103 41 0 12 114 7 109 2.92e-37 136
Msa0299170 AT3G48920.1 57.843 102 43 0 12 113 19 120 3.56e-37 136
Msa0299170 AT1G48000.1 56.311 103 45 0 11 113 32 134 7.98e-37 135
Msa0299170 AT5G52600.1 56.731 104 45 0 11 114 12 115 9.54e-37 133
Msa0299170 AT4G25560.1 55.140 107 48 0 12 118 11 117 1.19e-36 135
Msa0299170 AT5G55020.1 58.252 103 43 0 11 113 26 128 1.62e-36 140
Msa0299170 AT3G01530.1 55.340 103 46 0 11 113 25 127 2.40e-36 132
Msa0299170 AT1G68320.1 55.769 104 46 0 11 114 19 122 1.27e-35 132
Msa0299170 AT1G66370.1 55.238 105 47 0 10 114 7 111 2.34e-35 131
Msa0299170 AT2G47190.1 40.113 177 86 4 7 183 16 172 4.86e-35 130
Msa0299170 AT1G25340.1 48.507 134 58 2 12 145 19 141 4.91e-35 131
Msa0299170 AT2G26960.1 56.436 101 44 0 13 113 22 122 1.48e-34 133
Msa0299170 AT5G14750.3 43.503 177 86 6 23 196 3 168 3.02e-34 125
Msa0299170 AT3G46130.1 53.333 105 49 0 10 114 8 112 6.96e-34 127
Msa0299170 AT5G35550.2 59.794 97 39 0 39 135 45 141 8.21e-34 127
Msa0299170 AT5G59780.3 53.398 103 48 0 12 114 9 111 1.20e-33 126
Msa0299170 AT1G66380.1 53.913 115 53 0 8 122 5 119 6.07e-33 121
Msa0299170 AT3G53200.1 52.885 104 49 0 11 114 9 112 6.07e-33 124
Msa0299170 AT1G56650.1 52.991 117 55 0 10 126 7 123 2.25e-32 123
Msa0299170 AT1G66390.1 56.190 105 46 0 10 114 7 111 5.80e-32 122
Msa0299170 AT3G06490.1 49.587 121 60 1 11 131 19 138 7.03e-32 124
Msa0299170 AT5G26660.2 52.381 105 41 1 44 148 14 109 5.74e-31 121
Msa0299170 AT5G49620.1 48.760 121 61 1 11 131 26 145 8.56e-31 120
Msa0299170 AT3G12820.2 69.014 71 22 0 47 117 2 72 2.13e-30 116
Msa0299170 AT1G25340.2 46.269 134 56 3 12 145 19 136 2.69e-30 118
Msa0299170 AT1G25340.3 46.269 134 56 3 12 145 19 136 4.89e-30 118
Msa0299170 AT3G60460.1 50.000 104 51 1 11 113 11 114 1.17e-28 114
Msa0299170 AT3G27810.2 60.526 76 29 1 42 117 2 76 1.72e-28 110
Msa0299170 AT3G47600.2 55.789 95 38 1 23 117 22 112 4.09e-28 113
Msa0299170 AT5G40350.2 60.811 74 29 0 44 117 5 78 6.64e-28 108
Msa0299170 AT3G09230.1 49.123 114 49 2 13 122 55 163 9.72e-28 114
Msa0299170 AT3G27785.1 44.068 118 65 1 5 122 181 297 1.13e-27 114
Msa0299170 AT5G49620.2 43.704 135 61 2 11 131 26 159 2.31e-27 111
Msa0299170 AT4G18770.1 44.860 107 58 1 11 117 215 320 2.62e-27 113
Msa0299170 AT5G40360.1 46.491 114 56 3 11 123 156 265 3.96e-27 111
Msa0299170 AT5G11050.1 33.603 247 123 7 13 249 105 320 4.15e-27 112
Msa0299170 AT3G23250.2 36.747 166 84 4 57 202 1 165 6.16e-27 107
Msa0299170 AT2G26950.1 48.421 95 49 0 13 107 18 112 8.36e-27 110
Msa0299170 AT3G46130.3 59.722 72 29 0 43 114 9 80 2.94e-26 105
Msa0299170 AT5G58850.1 41.270 126 64 3 11 135 103 219 3.23e-26 110
Msa0299170 AT1G69560.1 32.821 195 103 3 13 181 107 299 3.59e-26 108
Msa0299170 AT1G69560.2 32.821 195 103 3 13 181 123 315 4.03e-26 108
Msa0299170 AT5G59780.2 60.563 71 28 0 44 114 20 90 5.24e-26 105
Msa0299170 AT3G46130.4 60.563 71 28 0 44 114 20 90 6.44e-26 105
Msa0299170 AT3G53200.2 61.972 71 27 0 44 114 9 79 1.63e-25 103
Msa0299170 AT1G17950.1 46.610 118 51 3 13 129 5 111 1.75e-25 104
Msa0299170 AT1G26780.2 44.444 117 62 2 11 126 96 210 1.98e-25 106
Msa0299170 AT5G67300.1 48.544 103 50 2 13 114 6 106 2.88e-25 105
Msa0299170 AT1G26780.1 44.444 117 62 2 11 126 96 210 3.20e-25 104
Msa0299170 AT5G14750.4 41.259 143 79 4 57 196 1 141 5.07e-25 100
Msa0299170 AT5G14750.2 41.259 143 79 4 57 196 1 141 5.07e-25 100
Msa0299170 AT5G11510.3 42.593 108 61 1 8 115 76 182 6.66e-25 107
Msa0299170 AT5G11510.3 34.000 100 64 2 13 111 29 127 1.75e-13 73.2
Msa0299170 AT5G11510.1 42.593 108 61 1 8 115 76 182 6.66e-25 107
Msa0299170 AT5G11510.1 34.000 100 64 2 13 111 29 127 1.75e-13 73.2
Msa0299170 AT5G11510.4 42.593 108 61 1 8 115 76 182 6.66e-25 107
Msa0299170 AT5G11510.4 34.000 100 64 2 13 111 29 127 1.75e-13 73.2
Msa0299170 AT3G50060.1 47.573 103 51 2 13 114 6 106 1.02e-24 103
Msa0299170 AT5G11510.2 42.593 108 61 1 8 115 76 182 1.05e-24 107
Msa0299170 AT5G11510.2 34.000 100 64 2 13 111 29 127 2.02e-13 72.8
Msa0299170 AT5G11510.5 42.593 108 61 1 8 115 76 182 1.18e-24 107
Msa0299170 AT5G11510.5 34.000 100 64 2 13 111 29 127 2.25e-13 72.4
Msa0299170 AT3G55730.1 47.115 104 52 2 13 115 56 157 3.43e-24 103
Msa0299170 AT3G09370.2 45.045 111 52 2 8 114 130 235 4.67e-24 104
Msa0299170 AT3G09370.2 35.000 100 63 2 13 111 83 181 1.28e-12 69.7
Msa0299170 AT3G09370.1 45.045 111 52 2 8 114 125 230 4.72e-24 104
Msa0299170 AT3G09370.1 35.000 100 63 2 13 111 78 176 1.36e-12 69.7
Msa0299170 AT4G37260.1 47.059 102 53 1 13 114 13 113 6.24e-24 101
Msa0299170 AT3G09370.3 45.045 111 52 2 8 114 138 243 6.62e-24 103
Msa0299170 AT3G09370.3 35.000 100 63 2 13 111 91 189 1.18e-12 70.1
Msa0299170 AT5G02320.1 44.954 109 57 2 8 115 122 228 8.19e-24 103
Msa0299170 AT5G02320.1 37.000 100 61 2 13 111 75 173 1.49e-14 75.9
Msa0299170 AT5G02320.2 44.954 109 57 2 8 115 122 228 8.19e-24 103
Msa0299170 AT5G02320.2 37.000 100 61 2 13 111 75 173 1.49e-14 75.9
Msa0299170 AT5G02320.3 44.954 109 57 2 8 115 62 168 1.34e-23 103
Msa0299170 AT5G02320.3 37.000 100 61 2 13 111 15 113 2.26e-14 75.1
Msa0299170 AT1G73410.1 49.515 103 49 2 13 114 6 106 3.41e-23 97.8
Msa0299170 AT4G33450.1 45.455 110 59 1 12 121 18 126 4.39e-23 97.8
Msa0299170 AT1G66380.3 60.274 73 29 0 42 114 6 78 5.75e-23 93.2
Msa0299170 AT2G23290.1 46.602 103 52 2 13 114 13 113 7.19e-23 98.6
Msa0299170 AT2G39880.1 46.226 106 48 2 13 114 50 150 9.19e-23 99.4
Msa0299170 AT1G71030.2 57.353 68 29 0 50 117 5 72 9.67e-23 95.1
Msa0299170 AT1G71030.1 57.353 68 29 0 50 117 19 86 1.13e-22 95.1
Msa0299170 AT1G73410.2 49.515 103 49 2 13 114 6 106 1.24e-22 95.5
Msa0299170 AT1G66380.2 52.326 86 41 0 8 93 5 90 2.98e-22 91.3
Msa0299170 AT3G29020.2 36.735 147 86 4 13 157 67 208 3.67e-22 96.7
Msa0299170 AT1G22640.3 61.667 60 23 0 57 116 1 60 4.10e-22 94.0
Msa0299170 AT5G17800.1 44.118 102 56 1 13 114 93 193 4.20e-22 96.7
Msa0299170 AT3G29020.1 38.760 129 75 3 13 139 65 191 8.36e-22 94.0
Msa0299170 AT4G32730.5 41.284 109 61 2 8 115 82 188 9.53e-22 98.6
Msa0299170 AT4G32730.5 34.579 107 68 2 13 118 35 140 1.58e-13 73.2
Msa0299170 AT4G32730.4 41.284 109 61 2 8 115 82 188 9.53e-22 98.6
Msa0299170 AT4G32730.4 34.579 107 68 2 13 118 35 140 1.58e-13 73.2
Msa0299170 AT4G32730.3 41.284 109 61 2 8 115 82 188 9.53e-22 98.6
Msa0299170 AT4G32730.3 34.579 107 68 2 13 118 35 140 1.58e-13 73.2
Msa0299170 AT4G32730.2 41.284 109 61 2 8 115 82 188 9.53e-22 98.6
Msa0299170 AT4G32730.2 34.579 107 68 2 13 118 35 140 1.58e-13 73.2
Msa0299170 AT2G25230.1 45.133 113 54 4 13 124 26 131 9.80e-22 93.6
Msa0299170 AT4G32730.1 41.284 109 61 2 8 115 82 188 1.30e-21 97.8
Msa0299170 AT4G32730.1 34.579 107 68 2 13 118 35 140 1.91e-13 72.8
Msa0299170 AT1G18960.1 42.373 118 56 5 1 115 1 109 3.88e-21 93.6
Msa0299170 AT2G37630.1 36.957 138 73 3 16 151 7 132 1.02e-19 90.5
Msa0299170 AT5G40430.1 41.379 116 59 5 11 125 52 159 1.24e-18 85.5
Msa0299170 AT5G39700.1 42.857 105 53 2 12 113 55 155 5.96e-18 82.0
Msa0299170 AT4G00540.2 41.284 109 58 3 11 115 101 207 4.37e-17 83.2
Msa0299170 AT4G00540.2 31.579 114 70 2 13 118 46 159 9.68e-11 63.5
Msa0299170 AT1G14350.2 38.095 126 68 3 15 139 27 143 7.05e-17 82.8
Msa0299170 AT1G14350.1 38.095 126 68 3 15 139 27 143 7.05e-17 82.8
Msa0299170 AT4G00540.1 41.284 109 58 3 11 115 99 205 8.35e-17 82.4
Msa0299170 AT3G18100.1 38.144 97 59 1 12 108 545 640 1.44e-15 79.3
Msa0299170 AT3G18100.3 38.144 97 59 1 12 108 497 592 2.15e-15 79.0
Msa0299170 AT3G18100.4 38.542 96 58 1 12 107 384 478 2.65e-15 78.6
Msa0299170 AT2G02820.2 37.500 112 67 2 15 125 32 141 3.42e-15 77.8
Msa0299170 AT2G02820.1 37.500 112 67 2 15 125 32 141 3.62e-15 77.4
Msa0299170 AT3G18100.2 38.144 97 59 1 12 108 332 427 3.83e-15 77.8
Msa0299170 AT2G02820.3 37.500 112 67 2 15 125 32 141 8.59e-15 75.5
Msa0299170 AT4G25560.2 57.447 47 20 0 72 118 5 51 6.20e-13 68.2
Msa0299170 AT5G59780.1 58.140 43 18 0 72 114 4 46 2.54e-12 65.5
Msa0299170 AT3G46130.2 58.140 43 18 0 72 114 4 46 4.36e-12 65.1

Find 83 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAACTCCTTCAAGTTTAT+TGG 0.126920 2_3:+53691488 None:intergenic
TAAAACTCCATCAAATTTAT+TGG 0.141593 2_3:+53691962 None:intergenic
TGAAAATGACCTTCCTTTAA+TGG 0.144521 2_3:-53691190 Msa0299170:CDS
AGGATTTGAGTGAGAATTTC+TGG 0.155231 2_3:-53691311 Msa0299170:CDS
GATATTTGATTTGCAATATT+AGG 0.201381 2_3:+53691924 None:intergenic
TTTCCATTGTAAGGTGATTA+TGG 0.216947 2_3:+53691253 None:intergenic
ATTATTTGAATTTGAATCTT+TGG 0.220751 2_3:+53692004 None:intergenic
ATGAATAATGCATCCATTAA+AGG 0.221966 2_3:+53691177 None:intergenic
TATACTATACCTGCAAATTT+AGG 0.254465 2_3:+53695776 None:intergenic
TTATTGGCTTCTTCCAATAT+AGG 0.256671 2_3:+53691978 None:intergenic
ATGAATAATGCATCCATAAA+AGG 0.286876 2_3:+53691567 None:intergenic
TTCAAATAATCACCCTATAT+TGG 0.288064 2_3:-53691991 Msa0299170:CDS
GACAATCGACTTGCAATATT+AGG 0.293210 2_3:+53691453 None:intergenic
CGTGATTGCTTCAAATTTAC+CGG 0.299900 2_3:-53692120 Msa0299170:CDS
TACTACTACCACCAAATTCT+TGG 0.300654 2_3:+53695951 None:intergenic
TATTGGCTTCTTCCAATATA+GGG 0.314144 2_3:+53691979 None:intergenic
ACAGGCACACACCAAGAATT+TGG 0.315908 2_3:-53695962 None:intergenic
GTGATTCTTTACCTCATTAT+CGG 0.317179 2_3:+53692091 None:intergenic
TTTAATGGATGCATTATTCA+TGG 0.332906 2_3:-53691175 Msa0299170:CDS
TGTGAACTGTCTATCATATA+AGG 0.339402 2_3:+53691282 None:intergenic
GAAGAAGCCAATAAATTTGA+TGG 0.344348 2_3:-53691969 Msa0299170:CDS
AGTTTCTTGGTTTCTTCCAT+TGG 0.347866 2_3:+53691738 None:intergenic
TAGCAAGTGTCTATCATATA+TGG 0.352614 2_3:+53691513 None:intergenic
CGACAACTACCTAAATTTGC+AGG 0.368724 2_3:-53695785 Msa0299170:intron
TCCATTGGAGGGTGATTATG+AGG 0.370095 2_3:+53691753 None:intergenic
AGATAGTGAACTCGTAATAT+TGG 0.395570 2_3:+53691686 None:intergenic
TGTCTAAGTGTCAATTTGTT+TGG 0.396316 2_3:-53690839 Msa0299170:three_prime_UTR
CTAGGTATGGCTGTTGGAAT+TGG 0.399200 2_3:-53695808 Msa0299170:CDS
TGCTATGCCAATAAACTTGA+AGG 0.414869 2_3:-53691495 Msa0299170:CDS
AGAACCCCTTGTGACAATAA+TGG 0.416910 2_3:-53695887 Msa0299170:CDS
TTCTTGGTTTCTTCCATTGG+AGG 0.432245 2_3:+53691741 None:intergenic
AGGTCATTGTCATCAAGAAT+TGG 0.433113 2_3:+53691357 None:intergenic
CTTTATAAAACGCTTCTTCA+AGG 0.438316 2_3:+53692058 None:intergenic
TATGAATTGTTTACCATATG+TGG 0.444097 2_3:+53691780 None:intergenic
GACAATAATGGATTGAGAAA+AGG 0.457500 2_3:-53695875 Msa0299170:CDS
GAAGAAACCAAGAAACTTGA+AGG 0.465125 2_3:-53691732 Msa0299170:CDS
ATTGCTTATGTAACTAGGTA+TGG 0.467457 2_3:-53695821 Msa0299170:CDS
AGTTGATTGCTTATGTAACT+AGG 0.476172 2_3:-53695826 Msa0299170:CDS
CTCAATCCATTATTGTCACA+AGG 0.493237 2_3:+53695881 None:intergenic
ATAATAAATAATTACATCAA+AGG 0.493740 2_3:+53690904 None:intergenic
TAATAAATAATTACATCAAA+GGG 0.496460 2_3:+53690905 None:intergenic
TCTTGGTTTCTTCCATTGGA+GGG 0.502044 2_3:+53691742 None:intergenic
CTGAGGCCAAATATCAAAAG+AGG 0.509978 2_3:-53695401 Msa0299170:CDS
CAAGAGAATCCGCTTGAAGA+TGG 0.512963 2_3:+53691657 None:intergenic
CAAGACAAATCGCTTGAAGC+TGG 0.530400 2_3:+53691894 None:intergenic
CGATTTGTCTTGCATAACAA+TGG 0.536383 2_3:-53691883 Msa0299170:CDS
GTTCTCACCATGGTCTCTAA+AGG 0.539675 2_3:+53695905 None:intergenic
TGTATGTTTCCATAAAAGAA+AGG 0.541995 2_3:+53691835 None:intergenic
TGAATGCATCCATAAAATGA+AGG 0.545826 2_3:+53691337 None:intergenic
ACCTCATTATCGGTTCTCCC+CGG 0.550386 2_3:+53692101 None:intergenic
TGGATTCTCATATGATATTG+TGG 0.550630 2_3:+53691377 None:intergenic
GTGGGAAGAGCTGTAGACTA+AGG 0.551758 2_3:-53695436 Msa0299170:CDS
TCACCATGGTCTCTAAAGGC+TGG 0.553133 2_3:+53695909 None:intergenic
TTTCAGGGCTTGAAAGGTGT+GGG 0.557460 2_3:-53695454 Msa0299170:intron
ATGAGGTGTCAGATTTCGAT+TGG 0.566168 2_3:-53690865 Msa0299170:three_prime_UTR
CAATCCATTATTGTCACAAG+GGG 0.566200 2_3:+53695883 None:intergenic
TGCATTCTCTTGCATAACAA+TGG 0.567171 2_3:-53691412 Msa0299170:CDS
TAATGTGAGTAATTCTTGGA+TGG 0.568617 2_3:+53690808 None:intergenic
GTGATTGCTTCAAATTTACC+GGG 0.570836 2_3:-53692119 Msa0299170:CDS
CAAGAGAATGCACTTGAAGA+TGG 0.571011 2_3:+53691423 None:intergenic
AAGAATATTAAGTCTAAGCG+TGG 0.575339 2_3:-53692038 Msa0299170:CDS
ATGGATTGAGAAAAGGCACT+TGG 0.575990 2_3:-53695868 Msa0299170:CDS
ATAATGAGGTAAAGAATCAC+TGG 0.577807 2_3:-53692088 Msa0299170:CDS
ACCGGGGAGAACCGATAATG+AGG 0.590459 2_3:-53692102 Msa0299170:CDS
CGGTAAATTTGAAGCAATCA+CGG 0.592595 2_3:+53692121 None:intergenic
CCCTCATAATCACCCTCCAA+TGG 0.596454 2_3:-53691754 Msa0299170:CDS
TCAATCCATTATTGTCACAA+GGG 0.597815 2_3:+53695882 None:intergenic
GGCACACACCAAGAATTTGG+TGG 0.600882 2_3:-53695959 None:intergenic
GTCACAAGGGGTTCTCACCA+TGG 0.605010 2_3:+53695895 None:intergenic
TCTTCGCAACCATCTTCAAG+CGG 0.608733 2_3:-53691666 Msa0299170:CDS
ATGTAACTAGGTATGGCTGT+TGG 0.609352 2_3:-53695814 Msa0299170:CDS
CTACCAGCCTTTAGAGACCA+TGG 0.614533 2_3:-53695912 Msa0299170:exon
TGAGGCCAAATATCAAAAGA+GGG 0.619320 2_3:-53695400 Msa0299170:CDS
TAAGGTGGATGAACTATCTG+AGG 0.621739 2_3:-53695418 Msa0299170:CDS
CCATTGGAGGGTGATTATGA+GGG 0.621896 2_3:+53691754 None:intergenic
CCATTGTAAGGTGATTATGG+AGG 0.622467 2_3:+53691256 None:intergenic
CCTCCATAATCACCTTACAA+TGG 0.623207 2_3:-53691256 Msa0299170:CDS
AAAAGGCACTTGGACTCATG+AGG 0.629560 2_3:-53695858 Msa0299170:CDS
ATAATGCATCCATTAAAGGA+AGG 0.636763 2_3:+53691181 None:intergenic
ATAATGCATCCATAAAAGGA+AGG 0.636763 2_3:+53691571 None:intergenic
ATATTAAGTCTAAGCGTGGA+AGG 0.639098 2_3:-53692034 Msa0299170:CDS
GGAAGAGCTGTAGACTAAGG+TGG 0.649277 2_3:-53695433 Msa0299170:CDS
TGATTGCTTCAAATTTACCG+GGG 0.729789 2_3:-53692118 Msa0299170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAATATTTTAAATTATT+AGG - chr2_3:53694572-53694591 Msa0299170:intron 0.0%
!! ATTAAGAATAATTATCTTTA+TGG + chr2_3:53691234-53691253 None:intergenic 10.0%
!! TTAATAATTAATGTGTAAAT+TGG - chr2_3:53691249-53691268 Msa0299170:CDS 10.0%
!! AAAAAAAAAAAATTCATTGT+TGG + chr2_3:53691660-53691679 None:intergenic 10.0%
!! ACTAATATAATATTGTAAAT+AGG + chr2_3:53692417-53692436 None:intergenic 10.0%
!!! TTTAATATAACTTTACTTTT+AGG - chr2_3:53692462-53692481 Msa0299170:intron 10.0%
!! CAAAAATCTAAATTAATTTA+AGG + chr2_3:53693924-53693943 None:intergenic 10.0%
!! ATTTGAAAAAAAAAAATCAT+AGG - chr2_3:53694346-53694365 Msa0299170:intron 10.0%
!! TTTGAAAAAAAAAAATCATA+GGG - chr2_3:53694347-53694366 Msa0299170:intron 10.0%
!! AAAAATTACATAAATAACAT+AGG + chr2_3:53694476-53694495 None:intergenic 10.0%
!! TAATAAATAATTACATCAAA+GGG + chr2_3:53695870-53695889 None:intergenic 10.0%
!! ATAATAAATAATTACATCAA+AGG + chr2_3:53695871-53695890 None:intergenic 10.0%
!!! ATAATATCATAAATTTTCGT+TGG - chr2_3:53691035-53691054 Msa0299170:intron 15.0%
!!! TTTTAAATTAATTTTCTCAC+AGG - chr2_3:53691166-53691185 Msa0299170:CDS 15.0%
!!! AATAAATTAACATACTTTTG+TGG - chr2_3:53691529-53691548 Msa0299170:CDS 15.0%
!!! TTATATTTTTGATTGTTTGT+TGG - chr2_3:53692262-53692281 Msa0299170:intron 15.0%
!!! ATTTTGTGTATTTTTATACA+AGG - chr2_3:53692309-53692328 Msa0299170:intron 15.0%
!! TACTAACTTACAAAATAAAA+GGG + chr2_3:53692732-53692751 None:intergenic 15.0%
!!! ATATATTTGTTCTTCTATTT+TGG - chr2_3:53693146-53693165 Msa0299170:intron 15.0%
!!! AGTTTGTTTAGTTAATTTTT+AGG - chr2_3:53693367-53693386 Msa0299170:intron 15.0%
!!! GTTTGTTTAGTTAATTTTTA+GGG - chr2_3:53693368-53693387 Msa0299170:intron 15.0%
!!! CAAATTTGAAATTGTTTATT+TGG + chr2_3:53694331-53694350 None:intergenic 15.0%
!! TTGAAAAAAAAAAATCATAG+GGG - chr2_3:53694348-53694367 Msa0299170:intron 15.0%
!! TGGATAAAGTTAAAATTATA+AGG - chr2_3:53694513-53694532 Msa0299170:intron 15.0%
!! ATTATTTGAATTTGAATCTT+TGG + chr2_3:53694771-53694790 None:intergenic 15.0%
!!! TTTTTATTTAGATATGTATG+AGG - chr2_3:53695890-53695909 Msa0299170:CDS 15.0%
!! ATGTTAATTTATTCTCTTTG+AGG + chr2_3:53691522-53691541 None:intergenic 20.0%
!!! TGAAATGTTTCTATATATGA+AGG + chr2_3:53691569-53691588 None:intergenic 20.0%
!! CAATCTTATTATCAAACAAT+TGG + chr2_3:53692694-53692713 None:intergenic 20.0%
!! CTACTAACTTACAAAATAAA+AGG + chr2_3:53692733-53692752 None:intergenic 20.0%
!!! ATTGATTCTTTTGGATAATT+TGG - chr2_3:53692769-53692788 Msa0299170:intron 20.0%
!!! ATTTTTCACAAACACATTAT+GGG + chr2_3:53692810-53692829 None:intergenic 20.0%
!! TTCTTCTATATGGTTTAAAT+TGG - chr2_3:53693186-53693205 Msa0299170:intron 20.0%
!! TCTTCTATATGGTTTAAATT+GGG - chr2_3:53693187-53693206 Msa0299170:intron 20.0%
!! TAAATTGGGATTATTTGATT+TGG - chr2_3:53693201-53693220 Msa0299170:intron 20.0%
!! AATGAGTCAATAATAAGTAT+AGG + chr2_3:53693544-53693563 None:intergenic 20.0%
!! AGAATGTATATAAAAGTGAA+TGG + chr2_3:53693589-53693608 None:intergenic 20.0%
!! AAATGGCATAATATATCAAA+AGG + chr2_3:53693619-53693638 None:intergenic 20.0%
!!! ATTATGCCATTTGATATTAT+TGG - chr2_3:53693627-53693646 Msa0299170:intron 20.0%
!! GTTAGATAACAAATAAATCT+TGG + chr2_3:53693791-53693810 None:intergenic 20.0%
!! TAAATAGAATTCTCTTACAA+AGG + chr2_3:53694423-53694442 None:intergenic 20.0%
!! TAAAACTCCATCAAATTTAT+TGG + chr2_3:53694813-53694832 None:intergenic 20.0%
!!! GATATTTGATTTGCAATATT+AGG + chr2_3:53694851-53694870 None:intergenic 20.0%
!!! ACAATTTTTGTGAGAATTTT+TGG - chr2_3:53694963-53694982 Msa0299170:intron 20.0%
!! TAACAATTTATTCTGCAATA+TGG + chr2_3:53695747-53695766 None:intergenic 20.0%
!! AATAAATTGTTACAGTAATG+TGG - chr2_3:53695755-53695774 Msa0299170:intron 20.0%
!! CTCTCAAAAAAAAAATCAAA+GGG + chr2_3:53695839-53695858 None:intergenic 20.0%
!! TCTCTCAAAAAAAAAATCAA+AGG + chr2_3:53695840-53695859 None:intergenic 20.0%
! TATACTATACCTGCAAATTT+AGG + chr2_3:53690999-53691018 None:intergenic 25.0%
!! ATCATAAATTTTCGTTGGAT+AGG - chr2_3:53691040-53691059 Msa0299170:intron 25.0%
! ATCAAACTTCATGAAAAACT+GGG - chr2_3:53691425-53691444 Msa0299170:CDS 25.0%
! TGTGTTCATAAAAAATCCAT+GGG + chr2_3:53691490-53691509 None:intergenic 25.0%
! TTGTGTTCATAAAAAATCCA+TGG + chr2_3:53691491-53691510 None:intergenic 25.0%
!!! AAACATTTGCTATTTAAGAG+AGG + chr2_3:53691729-53691748 None:intergenic 25.0%
! AGACATACACTATACATATT+TGG + chr2_3:53691760-53691779 None:intergenic 25.0%
!! TAAGTTTGTTTGTTCAAAGT+GGG + chr2_3:53691803-53691822 None:intergenic 25.0%
!!! TTATAAAAGAGCCTTTTTTG+TGG - chr2_3:53692052-53692071 Msa0299170:CDS 25.0%
!! TGGATGATTTTATGATTATG+TGG - chr2_3:53692282-53692301 Msa0299170:intron 25.0%
!! GGATGATTTTATGATTATGT+GGG - chr2_3:53692283-53692302 Msa0299170:intron 25.0%
!!! TTGAACATTACGCTTTATTT+TGG - chr2_3:53692332-53692351 Msa0299170:intron 25.0%
! TTTATGAGTAGATTTCTTCT+AGG - chr2_3:53692513-53692532 Msa0299170:intron 25.0%
! AAACAATTGGTATATCAATG+GGG + chr2_3:53692681-53692700 None:intergenic 25.0%
! CAAACAATTGGTATATCAAT+GGG + chr2_3:53692682-53692701 None:intergenic 25.0%
! TCAAACAATTGGTATATCAA+TGG + chr2_3:53692683-53692702 None:intergenic 25.0%
!!! AAGAACTCTATTGATTCTTT+TGG - chr2_3:53692760-53692779 Msa0299170:intron 25.0%
!! GATTTTTCACAAACACATTA+TGG + chr2_3:53692811-53692830 None:intergenic 25.0%
! ATTCAAATATGTCTTCAACA+AGG + chr2_3:53692833-53692852 None:intergenic 25.0%
! AGAGTTCCAATAATATCAAA+TGG + chr2_3:53693636-53693655 None:intergenic 25.0%
!! AATTTCTCTATTTGTTAGAG+AGG - chr2_3:53693709-53693728 Msa0299170:intron 25.0%
! AGAAACAAAACATTCACATT+TGG - chr2_3:53693824-53693843 Msa0299170:intron 25.0%
!! TTTGAAAGTTCTAATACAGA+TGG - chr2_3:53694493-53694512 Msa0299170:intron 25.0%
!!! AAACACTTTTTTTTGAAGGA+AGG + chr2_3:53694547-53694566 None:intergenic 25.0%
!!! GTGAAAACACTTTTTTTTGA+AGG + chr2_3:53694551-53694570 None:intergenic 25.0%
! AATGATTTATAAAGTGCAGA+TGG - chr2_3:53694627-53694646 Msa0299170:intron 25.0%
! TTCAAATAATCACCCTATAT+TGG - chr2_3:53694781-53694800 Msa0299170:intron 25.0%
! TGTATGTTTCCATAAAAGAA+AGG + chr2_3:53694940-53694959 None:intergenic 25.0%
!! TTCTTTTATGGAAACATACA+TGG - chr2_3:53694940-53694959 Msa0299170:intron 25.0%
! TATGAATTGTTTACCATATG+TGG + chr2_3:53694995-53695014 None:intergenic 25.0%
!! TGAATTTTCATGTGATATAG+TGG + chr2_3:53695164-53695183 None:intergenic 25.0%
!! CATGAAAATTCAGTTTTTGA+TGG - chr2_3:53695172-53695191 Msa0299170:intron 25.0%
! ATGAATAATGCATCCATAAA+AGG + chr2_3:53695208-53695227 None:intergenic 25.0%
!! TTTTATGGATGCATTATTCA+TGG - chr2_3:53695207-53695226 Msa0299170:intron 25.0%
!! TAAAACTCCTTCAAGTTTAT+TGG + chr2_3:53695287-53695306 None:intergenic 25.0%
!! AAGTAACATTTTCCATTGTA+AGG + chr2_3:53695531-53695550 None:intergenic 25.0%
!! AAAATTTTCATGTGATGTTG+TGG + chr2_3:53695554-53695573 None:intergenic 25.0%
! ATGAATAATGCATCCATTAA+AGG + chr2_3:53695598-53695617 None:intergenic 25.0%
!! TTTAATGGATGCATTATTCA+TGG - chr2_3:53695597-53695616 Msa0299170:intron 25.0%
TCAATCCATTATTGTCACAA+GGG + chr2_3:53690893-53690912 None:intergenic 30.0%
!! GACAATAATGGATTGAGAAA+AGG - chr2_3:53690897-53690916 Msa0299170:three_prime_UTR 30.0%
AGTTGATTGCTTATGTAACT+AGG - chr2_3:53690946-53690965 Msa0299170:intron 30.0%
ATTGCTTATGTAACTAGGTA+TGG - chr2_3:53690951-53690970 Msa0299170:intron 30.0%
TGCAGGTATAGTATAAGAAA+AGG - chr2_3:53691004-53691023 Msa0299170:intron 30.0%
AACATACGACATTGAATGAT+TGG + chr2_3:53691091-53691110 None:intergenic 30.0%
AACAATTCTCTCGAGTTTAA+AGG + chr2_3:53691299-53691318 None:intergenic 30.0%
! AAGTTCCCTCTTTTGATATT+TGG + chr2_3:53691380-53691399 None:intergenic 30.0%
CATCAAACTTCATGAAAAAC+TGG - chr2_3:53691424-53691443 Msa0299170:CDS 30.0%
TTCATGAAAAACTGGGTAAT+AGG - chr2_3:53691432-53691451 Msa0299170:CDS 30.0%
AACATATCAACACTCTATCA+TGG - chr2_3:53691459-53691478 Msa0299170:CDS 30.0%
TCATAAAAAATCCATGGGTT+AGG + chr2_3:53691485-53691504 None:intergenic 30.0%
TTTCTATATATGAAGGCAAG+AGG + chr2_3:53691562-53691581 None:intergenic 30.0%
! TTGTTGGCTGATAACAATTT+CGG + chr2_3:53691644-53691663 None:intergenic 30.0%
! AAGTTTGTTTGTTCAAAGTG+GGG + chr2_3:53691802-53691821 None:intergenic 30.0%
! CTAAGTTTGTTTGTTCAAAG+TGG + chr2_3:53691804-53691823 None:intergenic 30.0%
!!! TTGCGTTTTTAAGTGTGAAT+CGG - chr2_3:53691916-53691935 Msa0299170:CDS 30.0%
GAAAAATTGGACCACAAAAA+AGG + chr2_3:53692066-53692085 None:intergenic 30.0%
TCGGAAAGAAGAAGAAAAAT+TGG + chr2_3:53692079-53692098 None:intergenic 30.0%
TCACAATAATGTGTTTGGTT+CGG + chr2_3:53692183-53692202 None:intergenic 30.0%
CCAATTCACAATAATGTGTT+TGG + chr2_3:53692188-53692207 None:intergenic 30.0%
CCAAACACATTATTGTGAAT+TGG - chr2_3:53692185-53692204 Msa0299170:intron 30.0%
GCTAACAATGATACAAATCA+AGG + chr2_3:53692574-53692593 None:intergenic 30.0%
TAAGATTGAGCTTATGCTAT+TGG - chr2_3:53692706-53692725 Msa0299170:intron 30.0%
!! TCTTTGTTGATTCTTCTCTT+TGG - chr2_3:53692895-53692914 Msa0299170:intron 30.0%
CTAATCTTTCTTCTCAATGT+TGG - chr2_3:53692932-53692951 Msa0299170:intron 30.0%
GATTAGATTTCTCACTTTAG+TGG - chr2_3:53692987-53693006 Msa0299170:intron 30.0%
!!! TCACTTTAGTGGCTTTTTTT+TGG - chr2_3:53692998-53693017 Msa0299170:intron 30.0%
TTGTAATAAGCTCAAAGCTT+TGG - chr2_3:53693397-53693416 Msa0299170:intron 30.0%
TGTGAAATATGTCTAACCTT+AGG + chr2_3:53693681-53693700 None:intergenic 30.0%
GAAAGTTTCACATATTAGAG+TGG + chr2_3:53693761-53693780 None:intergenic 30.0%
ACAAATAAATCTTGGCACTT+AGG + chr2_3:53693783-53693802 None:intergenic 30.0%
AACAAAACATTCACATTTGG+TGG - chr2_3:53693827-53693846 Msa0299170:intron 30.0%
ATTACTGTAAACCAGTTGAA+TGG + chr2_3:53693887-53693906 None:intergenic 30.0%
CTTATATTCAAGACCAAAGA+AGG - chr2_3:53694086-53694105 Msa0299170:intron 30.0%
GAATAAGACAAGAAACTCAA+TGG - chr2_3:53694151-53694170 Msa0299170:intron 30.0%
GTGATTCTTTACCTCATTAT+CGG + chr2_3:53694684-53694703 None:intergenic 30.0%
ATAATGAGGTAAAGAATCAC+TGG - chr2_3:53694684-53694703 Msa0299170:intron 30.0%
CTTTATAAAACGCTTCTTCA+AGG + chr2_3:53694717-53694736 None:intergenic 30.0%
AAGAATATTAAGTCTAAGCG+TGG - chr2_3:53694734-53694753 Msa0299170:intron 30.0%
!! TATTGGCTTCTTCCAATATA+GGG + chr2_3:53694796-53694815 None:intergenic 30.0%
!! TTATTGGCTTCTTCCAATAT+AGG + chr2_3:53694797-53694816 None:intergenic 30.0%
GAAGAAGCCAATAAATTTGA+TGG - chr2_3:53694803-53694822 Msa0299170:intron 30.0%
!! TGATAGTGACCTTTCTTTTA+TGG - chr2_3:53694928-53694947 Msa0299170:intron 30.0%
! AAAAACTCCTTCAAGTTTCT+TGG + chr2_3:53695050-53695069 None:intergenic 30.0%
AGATAGTGAACTCGTAATAT+TGG + chr2_3:53695089-53695108 None:intergenic 30.0%
ATAATGCATCCATAAAAGGA+AGG + chr2_3:53695204-53695223 None:intergenic 30.0%
TAGCAAGTGTCTATCATATA+TGG + chr2_3:53695262-53695281 None:intergenic 30.0%
TGGATTCTCATATGATATTG+TGG + chr2_3:53695398-53695417 None:intergenic 30.0%
! TGACAATGACCTTCATTTTA+TGG - chr2_3:53695426-53695445 Msa0299170:CDS 30.0%
TGAATGCATCCATAAAATGA+AGG + chr2_3:53695438-53695457 None:intergenic 30.0%
! TTTTATGGATGCATTCATAG+AGG - chr2_3:53695441-53695460 Msa0299170:CDS 30.0%
TGTGAACTGTCTATCATATA+AGG + chr2_3:53695493-53695512 None:intergenic 30.0%
TTTCCATTGTAAGGTGATTA+TGG + chr2_3:53695522-53695541 None:intergenic 30.0%
TGAAAATGACCTTCCTTTAA+TGG - chr2_3:53695582-53695601 Msa0299170:intron 30.0%
ATAATGCATCCATTAAAGGA+AGG + chr2_3:53695594-53695613 None:intergenic 30.0%
AAATTGTTACAGTAATGTGG+TGG - chr2_3:53695758-53695777 Msa0299170:intron 30.0%
! TGTCTAAGTGTCAATTTGTT+TGG - chr2_3:53695933-53695952 Msa0299170:five_prime_UTR 30.0%
CAATCCATTATTGTCACAAG+GGG + chr2_3:53690892-53690911 None:intergenic 35.0%
CTCAATCCATTATTGTCACA+AGG + chr2_3:53690894-53690913 None:intergenic 35.0%
! GACATTGAATGATTGGTCAT+TGG + chr2_3:53691084-53691103 None:intergenic 35.0%
! AACTCGAGAGAATTGTTTTC+AGG - chr2_3:53691302-53691321 Msa0299170:CDS 35.0%
! ACTCGAGAGAATTGTTTTCA+GGG - chr2_3:53691303-53691322 Msa0299170:CDS 35.0%
!! AATTGTTTTCAGGGCTTGAA+AGG - chr2_3:53691312-53691331 Msa0299170:CDS 35.0%
TGAGGCCAAATATCAAAAGA+GGG - chr2_3:53691372-53691391 Msa0299170:CDS 35.0%
! TGTTGGCTGATAACAATTTC+GGG + chr2_3:53691643-53691662 None:intergenic 35.0%
! TTTCTTCCATTTTGCTACCA+TGG - chr2_3:53691683-53691702 Msa0299170:CDS 35.0%
TTTCCCTCATAGCTATTGAA+TGG - chr2_3:53691829-53691848 Msa0299170:CDS 35.0%
TCACCATTCAATAGCTATGA+GGG + chr2_3:53691835-53691854 None:intergenic 35.0%
!!! CCGATTTCACTGATTTTGTT+GGG + chr2_3:53691994-53692013 None:intergenic 35.0%
CCCAACAAAATCAGTGAAAT+CGG - chr2_3:53691991-53692010 Msa0299170:CDS 35.0%
!!! TCCGATTTCACTGATTTTGT+TGG + chr2_3:53691995-53692014 None:intergenic 35.0%
CACACGTTTAATGAGCTTAT+GGG + chr2_3:53692102-53692121 None:intergenic 35.0%
TCTATGGAAGATGAGTTGTT+TGG + chr2_3:53692146-53692165 None:intergenic 35.0%
GGTCGTTTAAGTGTAATCTA+TGG + chr2_3:53692162-53692181 None:intergenic 35.0%
!! AGAAAGCATTCCTAACGATA+TGG + chr2_3:53692626-53692645 None:intergenic 35.0%
ATCAACAAAGAGAGAAACCA+AGG + chr2_3:53692886-53692905 None:intergenic 35.0%
ACCATATAGAAGAACCAGTA+GGG + chr2_3:53693180-53693199 None:intergenic 35.0%
AACCATATAGAAGAACCAGT+AGG + chr2_3:53693181-53693200 None:intergenic 35.0%
!! CTTTGTTGATTCTTCCCATT+TGG - chr2_3:53693287-53693306 Msa0299170:intron 35.0%
TCTATGGCTAATGGTATAAG+TGG - chr2_3:53693322-53693341 Msa0299170:intron 35.0%
CTAATAGTGTAACCAACTAG+AGG + chr2_3:53693349-53693368 None:intergenic 35.0%
CTTAGGTGATCACATAAAGA+AGG + chr2_3:53693664-53693683 None:intergenic 35.0%
CTTCTTTATGTGATCACCTA+AGG - chr2_3:53693662-53693681 Msa0299170:intron 35.0%
AGTTTCACATATTAGAGTGG+TGG + chr2_3:53693758-53693777 None:intergenic 35.0%
!! ACCAAAGAAGGTATCTCTTT+AGG - chr2_3:53694098-53694117 Msa0299170:intron 35.0%
!! CCAAAGAAGGTATCTCTTTA+GGG - chr2_3:53694099-53694118 Msa0299170:intron 35.0%
AAGAAACTCAATGGATGAGA+TGG - chr2_3:53694160-53694179 Msa0299170:intron 35.0%
AGAAACTCAATGGATGAGAT+GGG - chr2_3:53694161-53694180 Msa0299170:intron 35.0%
! CGGTAAATTTGAAGCAATCA+CGG + chr2_3:53694654-53694673 None:intergenic 35.0%
CGTGATTGCTTCAAATTTAC+CGG - chr2_3:53694652-53694671 Msa0299170:intron 35.0%
GTGATTGCTTCAAATTTACC+GGG - chr2_3:53694653-53694672 Msa0299170:intron 35.0%
TGATTGCTTCAAATTTACCG+GGG - chr2_3:53694654-53694673 Msa0299170:intron 35.0%
ATATTAAGTCTAAGCGTGGA+AGG - chr2_3:53694738-53694757 Msa0299170:intron 35.0%
CGATTTGTCTTGCATAACAA+TGG - chr2_3:53694889-53694908 Msa0299170:intron 35.0%
AGTTTCTTGGTTTCTTCCAT+TGG + chr2_3:53695037-53695056 None:intergenic 35.0%
GAAGAAACCAAGAAACTTGA+AGG - chr2_3:53695040-53695059 Msa0299170:intron 35.0%
TGCTATGCCAATAAACTTGA+AGG - chr2_3:53695277-53695296 Msa0299170:intron 35.0%
TGCATTCTCTTGCATAACAA+TGG - chr2_3:53695360-53695379 Msa0299170:CDS 35.0%
AGGTCATTGTCATCAAGAAT+TGG + chr2_3:53695418-53695437 None:intergenic 35.0%
AGGATTTGAGTGAGAATTTC+TGG - chr2_3:53695461-53695480 Msa0299170:intron 35.0%
AATAGTGTAGCTTCTTCACT+TGG + chr2_3:53695664-53695683 None:intergenic 35.0%
! CTGAGTACGATGTAGAATTT+TGG - chr2_3:53695719-53695738 Msa0299170:intron 35.0%
AGAACCCCTTGTGACAATAA+TGG - chr2_3:53690885-53690904 Msa0299170:three_prime_UTR 40.0%
!! ATGGATTGAGAAAAGGCACT+TGG - chr2_3:53690904-53690923 Msa0299170:three_prime_UTR 40.0%
ATGTAACTAGGTATGGCTGT+TGG - chr2_3:53690958-53690977 Msa0299170:intron 40.0%
CGACAACTACCTAAATTTGC+AGG - chr2_3:53690987-53691006 Msa0299170:intron 40.0%
GAGAATTCTTTGCAGTATCC+TGG + chr2_3:53691212-53691231 None:intergenic 40.0%
TAAGGTGGATGAACTATCTG+AGG - chr2_3:53691354-53691373 Msa0299170:CDS 40.0%
CTGAGGCCAAATATCAAAAG+AGG - chr2_3:53691371-53691390 Msa0299170:CDS 40.0%
!! GCTGATAACAATTTCGGGTT+GGG + chr2_3:53691638-53691657 None:intergenic 40.0%
AGAGAGGCAATCTATGAGAA+TGG + chr2_3:53691713-53691732 None:intergenic 40.0%
GTCACCATTCAATAGCTATG+AGG + chr2_3:53691836-53691855 None:intergenic 40.0%
!!! CGTTTTTAAGTGTGAATCGG+TGG - chr2_3:53691919-53691938 Msa0299170:CDS 40.0%
TGAAATCAGAGCTTGCAGAT+TGG - chr2_3:53691957-53691976 Msa0299170:CDS 40.0%
GAAATCAGAGCTTGCAGATT+GGG - chr2_3:53691958-53691977 Msa0299170:CDS 40.0%
CGTTTAATGAGCTTATGGGT+CGG + chr2_3:53692098-53692117 None:intergenic 40.0%
CCACACGTTTAATGAGCTTA+TGG + chr2_3:53692103-53692122 None:intergenic 40.0%
CCATAAGCTCATTAAACGTG+TGG - chr2_3:53692100-53692119 Msa0299170:CDS 40.0%
!! GGTCATGTGACTTGTTCTAT+TGG + chr2_3:53692602-53692621 None:intergenic 40.0%
AAGCATTCCTAACGATATGG+AGG + chr2_3:53692623-53692642 None:intergenic 40.0%
!! TTGATGGTGGATCTATGTAG+CGG + chr2_3:53692658-53692677 None:intergenic 40.0%
!! TATATCAATGGGGTTGATGG+TGG + chr2_3:53692671-53692690 None:intergenic 40.0%
TGGTATATCAATGGGGTTGA+TGG + chr2_3:53692674-53692693 None:intergenic 40.0%
ACAAAGAGAGAAACCAAGGA+GGG + chr2_3:53692882-53692901 None:intergenic 40.0%
AACAAAGAGAGAAACCAAGG+AGG + chr2_3:53692883-53692902 None:intergenic 40.0%
!! TTTTGGTTGCATATCCCTAC+TGG - chr2_3:53693163-53693182 Msa0299170:intron 40.0%
!! TCCCTACTGGTTCTTCTATA+TGG - chr2_3:53693176-53693195 Msa0299170:intron 40.0%
ATGCTTCTCTCTATGGCTAA+TGG - chr2_3:53693313-53693332 Msa0299170:intron 40.0%
TTGTTGCATCGTGAGTTTGA+AGG - chr2_3:53693500-53693519 Msa0299170:intron 40.0%
TGTTGCATCGTGAGTTTGAA+GGG - chr2_3:53693501-53693520 Msa0299170:intron 40.0%
CTAACTTCTCACCATTCAAC+TGG - chr2_3:53693873-53693892 Msa0299170:intron 40.0%
CCCTAAAGAGATACCTTCTT+TGG + chr2_3:53694102-53694121 None:intergenic 40.0%
!! GTATCTCTTTAGGGTTCGTT+TGG - chr2_3:53694108-53694127 Msa0299170:intron 40.0%
! TTTTTGGACAGAGCCACATA+TGG - chr2_3:53694979-53694998 Msa0299170:intron 40.0%
TCTTGGTTTCTTCCATTGGA+GGG + chr2_3:53695033-53695052 None:intergenic 40.0%
TTCTTGGTTTCTTCCATTGG+AGG + chr2_3:53695034-53695053 None:intergenic 40.0%
! TGGCAATGACCTTCCTTTTA+TGG - chr2_3:53695192-53695211 Msa0299170:intron 40.0%
CAAGAGAATGCACTTGAAGA+TGG + chr2_3:53695352-53695371 None:intergenic 40.0%
CCATTGTAAGGTGATTATGG+AGG + chr2_3:53695519-53695538 None:intergenic 40.0%
CCTCCATAATCACCTTACAA+TGG - chr2_3:53695516-53695535 Msa0299170:intron 40.0%
! ATGAGGTGTCAGATTTCGAT+TGG - chr2_3:53695907-53695926 Msa0299170:exon 40.0%
GTTCTCACCATGGTCTCTAA+AGG + chr2_3:53690870-53690889 None:intergenic 45.0%
!! AAAAGGCACTTGGACTCATG+AGG - chr2_3:53690914-53690933 Msa0299170:three_prime_UTR 45.0%
CTAGGTATGGCTGTTGGAAT+TGG - chr2_3:53690964-53690983 Msa0299170:intron 45.0%
ACTTGTTCCAACAGAACTCC+AGG - chr2_3:53691191-53691210 Msa0299170:CDS 45.0%
!! TTTTCAGGGCTTGAAAGGTG+TGG - chr2_3:53691317-53691336 Msa0299170:CDS 45.0%
! TTTCAGGGCTTGAAAGGTGT+GGG - chr2_3:53691318-53691337 Msa0299170:CDS 45.0%
! GGCTGATAACAATTTCGGGT+TGG + chr2_3:53691639-53691658 None:intergenic 45.0%
TCTATGAGAATGGCAAGCCA+TGG + chr2_3:53691703-53691722 None:intergenic 45.0%
CACATGACCTCCATATCGTT+AGG - chr2_3:53692613-53692632 Msa0299170:intron 45.0%
!! GAGAGAAGCATCAGCCAAAT+GGG + chr2_3:53693304-53693323 None:intergenic 45.0%
!! AGAGAGAAGCATCAGCCAAA+TGG + chr2_3:53693305-53693324 None:intergenic 45.0%
TTGGCTGATGCTTCTCTCTA+TGG - chr2_3:53693306-53693325 Msa0299170:intron 45.0%
GGTATAAGTGGTCCTCTAGT+TGG - chr2_3:53693334-53693353 Msa0299170:intron 45.0%
!! AGCTCAAAGCTTTGGCTTGA+TGG - chr2_3:53693405-53693424 Msa0299170:intron 45.0%
!! GCTCAAAGCTTTGGCTTGAT+GGG - chr2_3:53693406-53693425 Msa0299170:intron 45.0%
!! TCTCTTTAGGGTTCGTTTGG+TGG - chr2_3:53694111-53694130 Msa0299170:intron 45.0%
CAAGACAAATCGCTTGAAGC+TGG + chr2_3:53694881-53694900 None:intergenic 45.0%
CCATTGGAGGGTGATTATGA+GGG + chr2_3:53695021-53695040 None:intergenic 45.0%
TCCATTGGAGGGTGATTATG+AGG + chr2_3:53695022-53695041 None:intergenic 45.0%
TCTTCGCAACCATCTTCAAG+CGG - chr2_3:53695106-53695125 Msa0299170:intron 45.0%
CAAGAGAATCCGCTTGAAGA+TGG + chr2_3:53695118-53695137 None:intergenic 45.0%
GTGTAGCTTCTTCACTTGGA+GGG + chr2_3:53695660-53695679 None:intergenic 45.0%
AGTGTAGCTTCTTCACTTGG+AGG + chr2_3:53695661-53695680 None:intergenic 45.0%
TCATGTTCACATGACTCTGC+AGG + chr2_3:53695688-53695707 None:intergenic 45.0%
!! AAAAATCTAAATTAATTTAA+GGG + chr2_3:53693923-53693942 None:intergenic 5.0%
!!! AAAAATATCAAAAATTATTT+TGG + chr2_3:53694255-53694274 None:intergenic 5.0%
!!! AAATTATTTCATTAAATTTT+AGG + chr2_3:53694278-53694297 None:intergenic 5.0%
! CTACCAGCCTTTAGAGACCA+TGG - chr2_3:53690860-53690879 Msa0299170:three_prime_UTR 50.0%
! TCACCATGGTCTCTAAAGGC+TGG + chr2_3:53690866-53690885 None:intergenic 50.0%
GCAGTATCCTGGAGTTCTGT+TGG + chr2_3:53691201-53691220 None:intergenic 50.0%
GTGGGAAGAGCTGTAGACTA+AGG - chr2_3:53691336-53691355 Msa0299170:CDS 50.0%
GGAAGAGCTGTAGACTAAGG+TGG - chr2_3:53691339-53691358 Msa0299170:CDS 50.0%
CTCTATCATGGCCTAACCCA+TGG - chr2_3:53691471-53691490 Msa0299170:CDS 50.0%
GGCAAGCCATGGTAGCAAAA+TGG + chr2_3:53691692-53691711 None:intergenic 50.0%
GGGGCTGTCAAGTGTACAAA+CGG + chr2_3:53691783-53691802 None:intergenic 50.0%
ATCAGAGCTTGCAGATTGGG+CGG - chr2_3:53691961-53691980 Msa0299170:CDS 50.0%
AGAGAGAAACCAAGGAGGGA+GGG + chr2_3:53692878-53692897 None:intergenic 50.0%
AAGAGAGAAACCAAGGAGGG+AGG + chr2_3:53692879-53692898 None:intergenic 50.0%
!! ACCTCATTATCGGTTCTCCC+CGG + chr2_3:53694674-53694693 None:intergenic 50.0%
CCCTCATAATCACCCTCCAA+TGG - chr2_3:53695018-53695037 Msa0299170:intron 50.0%
GTCACAAGGGGTTCTCACCA+TGG + chr2_3:53690880-53690899 None:intergenic 55.0%
AGAAACCAAGGAGGGAGGGA+GGG + chr2_3:53692874-53692893 None:intergenic 55.0%
ACCGGGGAGAACCGATAATG+AGG - chr2_3:53694670-53694689 Msa0299170:intron 55.0%
GAGAAACCAAGGAGGGAGGG+AGG + chr2_3:53692875-53692894 None:intergenic 60.0%
TCTCTCCCTCCCTCCCTCCT+TGG - chr2_3:53692866-53692885 Msa0299170:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 53690822 53695972 53690822 ID=Msa0299170;Name=Msa0299170
chr2_3 mRNA 53690822 53695972 53690822 ID=Msa0299170-mRNA-1;Parent=Msa0299170;Name=Msa0299170-mRNA-1;_AED=0.23;_eAED=0.23;_QI=57|1|1|1|0.66|0.5|4|124|414
chr2_3 exon 53690822 53690937 53690822 ID=Msa0299170-mRNA-1:exon:17217;Parent=Msa0299170-mRNA-1
chr2_3 exon 53691156 53692148 53691156 ID=Msa0299170-mRNA-1:exon:17216;Parent=Msa0299170-mRNA-1
chr2_3 exon 53695341 53695470 53695341 ID=Msa0299170-mRNA-1:exon:17215;Parent=Msa0299170-mRNA-1
chr2_3 exon 53695786 53695972 53695786 ID=Msa0299170-mRNA-1:exon:17214;Parent=Msa0299170-mRNA-1
chr2_3 five_prime_UTR 53695916 53695972 53695916 ID=Msa0299170-mRNA-1:five_prime_utr;Parent=Msa0299170-mRNA-1
chr2_3 CDS 53695786 53695915 53695786 ID=Msa0299170-mRNA-1:cds;Parent=Msa0299170-mRNA-1
chr2_3 CDS 53695341 53695470 53695341 ID=Msa0299170-mRNA-1:cds;Parent=Msa0299170-mRNA-1
chr2_3 CDS 53691164 53692148 53691164 ID=Msa0299170-mRNA-1:cds;Parent=Msa0299170-mRNA-1
chr2_3 three_prime_UTR 53691156 53691163 53691156 ID=Msa0299170-mRNA-1:three_prime_utr;Parent=Msa0299170-mRNA-1
chr2_3 three_prime_UTR 53690822 53690937 53690822 ID=Msa0299170-mRNA-1:three_prime_utr;Parent=Msa0299170-mRNA-1
Gene Sequence

>Msa0299170

ATGGTGAGAACCCCTTGTGACAATAATGGATTGAGAAAAGGCACTTGGACTCATGAGGAAGACAAAAAGTTGATTGCTTATGTAACTAGGTATGGCTGTTGGAATTGGCGACAACTACCTAAATTTGCAGGGCTTGAAAGGTGTGGGAAGAGCTGTAGACTAAGGTGGATGAACTATCTGAGGCCAAATATCAAAAGAGGGAACTTTAATCAACAAGAAGAAGAGATTATCATCAAACTTCATGAAAAACTGGGTAATAGATGGACCGTGATTGCTTCAAATTTACCGGGGAGAACCGATAATGAGGTAAAGAATCACTGGCACACTACCTTGAAGAAGCGTTTTATAAAGAATATTAAGTCTAAGCGTGGAAGGAGAAAAGCCAAAGATTCAAATTCAAATAATCACCCTATATTGGAAGAAGCCAATAAATTTGATGGAGTTTTAGAGAACAACAATGATCCTAATATTGCAAATCAAATATCTTCACAACCAGCTTCAAGCGATTTGTCTTGCATAACAATGGAAACTGCAATTTTTGATGATAGTGACCTTTCTTTTATGGAAACATACATGGACAATTTTTGTGAGAATTTTTGGACAGAGCCACATATGGTAAACAATTCATATGTCCCTCATAATCACCCTCCAATGGAAGAAACCAAGAAACTTGAAGGAGTTTTTGAGAACAACATCGATGCCAATATTACGAGTTCACTATCTTCGCAACCATCTTCAAGCGGATTCTCTTGCATAACAACAGAAAATTTAGCTTCCACTATATCACATGAAAATTCAGTTTTTGATGGCAATGACCTTCCTTTTATGGATGCATTATTCATGGAGACTGTGAGTGAGAATTTTTTGACTGAGCCATATATGATAGACACTTGCTATGCCAATAAACTTGAAGGAGTTTTAGAGAACAATGATCCTAATATTGCAAGTCGATTGTCTTCACAACCATCTTCAAGTGCATTCTCTTGCATAACAATGGATACTGCATCTACCACAATATCATATGAGAATCCAATTCTTGATGACAATGACCTTCATTTTATGGATGCATTCATAGAGGATTTGAGTGAGAATTTCTGGTCAGAGCCTTATATGATAGACAGTTCACATGTCCTCCATAATCACCTTACAATGGAAAATGTTACTTCCACAACATCACATGAAAATTTTGTTCTTGATGAAAATGACCTTCCTTTAATGGATGCATTATTCATGGAGACTGAGTGA
Protein sequence

>Msa0299170

MVRTPCDNNGLRKGTWTHEEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWMNYLRPNIKRGNFNQQEEEIIIKLHEKLGNRWTVIASNLPGRTDNEVKNHWHTTLKKRFIKNIKSKRGRRKAKDSNSNNHPILEEANKFDGVLENNNDPNIANQISSQPASSDLSCITMETAIFDDSDLSFMETYMDNFCENFWTEPHMVNNSYVPHNHPPMEETKKLEGVFENNIDANITSSLSSQPSSSGFSCITTENLASTISHENSVFDGNDLPFMDALFMETVSENFLTEPYMIDTCYANKLEGVLENNDPNIASRLSSQPSSSAFSCITMDTASTTISYENPILDDNDLHFMDAFIEDLSENFWSEPYMIDSSHVLHNHLTMENVTSTTSHENFVLDENDLPLMDALFMETE*