Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301430 | XP_013452663.1 | 100.000 | 168 | 0 | 0 | 1 | 168 | 1 | 168 | 4.76e-118 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301430 | sp|Q9LZD7|MED7B_ARATH | 77.976 | 168 | 37 | 0 | 1 | 168 | 1 | 168 | 1.64e-88 | 259 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301430 | A0A072UB69 | 100.000 | 168 | 0 | 0 | 1 | 168 | 1 | 168 | 2.27e-118 | 340 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0301430 | TR | MED7 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0301430 | Msa0338880 | 0.989958 | 2.058527e-180 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301430 | MtrunA17_Chr6g0478701 | 100.000 | 168 | 0 | 0 | 1 | 168 | 1 | 168 | 4.37e-122 | 340 |
| Msa0301430 | MtrunA17_Chr2g0326811 | 99.405 | 168 | 1 | 0 | 1 | 168 | 1 | 168 | 1.46e-121 | 339 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301430 | AT5G03500.6 | 77.976 | 168 | 37 | 0 | 1 | 168 | 11 | 178 | 1.67e-89 | 259 |
| Msa0301430 | AT5G03500.3 | 77.976 | 168 | 37 | 0 | 1 | 168 | 1 | 168 | 1.67e-89 | 259 |
| Msa0301430 | AT5G03500.4 | 77.976 | 168 | 37 | 0 | 1 | 168 | 1 | 168 | 1.67e-89 | 259 |
| Msa0301430 | AT5G03500.2 | 77.976 | 168 | 37 | 0 | 1 | 168 | 1 | 168 | 1.67e-89 | 259 |
| Msa0301430 | AT5G03500.5 | 77.976 | 168 | 37 | 0 | 1 | 168 | 1 | 168 | 1.67e-89 | 259 |
| Msa0301430 | AT5G03500.7 | 77.976 | 168 | 37 | 0 | 1 | 168 | 1 | 168 | 1.67e-89 | 259 |
| Msa0301430 | AT5G03500.1 | 77.976 | 168 | 37 | 0 | 1 | 168 | 1 | 168 | 1.67e-89 | 259 |
| Msa0301430 | AT5G03220.1 | 79.167 | 168 | 35 | 0 | 1 | 168 | 1 | 168 | 1.75e-84 | 246 |
Find 72 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAACTAACTATGCTTTAA+TGG | 0.159768 | 2_3:-57517254 | None:intergenic |
| AGCAACTCTGATTCACATTT+TGG | 0.181104 | 2_3:+57516030 | Msa0301430:CDS |
| AGAATTGCAACTACACATTT+TGG | 0.197843 | 2_3:+57515778 | Msa0301430:CDS |
| GTTATTTAGTGAAACCTTAA+AGG | 0.212541 | 2_3:-57517329 | None:intergenic |
| AGTTGCACTAACCTCCTTTA+AGG | 0.228687 | 2_3:+57517315 | Msa0301430:three_prime_UTR |
| TTCTCTTCGTCTCTCTTTCT+CGG | 0.270949 | 2_3:-57512171 | None:intergenic |
| CACCACCACCACCTTATTAC+AGG | 0.297273 | 2_3:+57513114 | Msa0301430:CDS |
| AAGGAGCTGAGGTCACTTAA+TGG | 0.305351 | 2_3:+57515755 | Msa0301430:CDS |
| TAAGATAGCCTACCAATATT+AGG | 0.320366 | 2_3:-57514954 | None:intergenic |
| GGTGCTTAATTTAAAATTAG+AGG | 0.323185 | 2_3:-57517362 | None:intergenic |
| GAAGGAACTTATATTTGTTT+CGG | 0.355999 | 2_3:+57513194 | Msa0301430:CDS |
| GACAATCATGGCAACCTTAA+GGG | 0.370574 | 2_3:+57517290 | Msa0301430:three_prime_UTR |
| GATGCATCTATGATCTTTGA+AGG | 0.371929 | 2_3:+57513049 | Msa0301430:five_prime_UTR |
| GAATTCTCTGCGTCCTCATC+AGG | 0.376395 | 2_3:+57515892 | Msa0301430:CDS |
| GTGATGCGCCGGCAAGGTTC+CGG | 0.379470 | 2_3:-57512244 | None:intergenic |
| GGAGGCTCTGGAGCAGACTC+AGG | 0.379890 | 2_3:-57513161 | None:intergenic |
| AGACAATCATGGCAACCTTA+AGG | 0.382744 | 2_3:+57517289 | Msa0301430:three_prime_UTR |
| CACACTAGCCGGAACCTTGC+CGG | 0.391574 | 2_3:+57512236 | Msa0301430:five_prime_UTR |
| AAGCTGTGGAGGACATAAAT+AGG | 0.396665 | 2_3:+57516077 | Msa0301430:CDS |
| TCAATCGGTGGTGGAGGCTC+TGG | 0.403322 | 2_3:-57513173 | None:intergenic |
| GAGTCATTGGCAACACTTGA+TGG | 0.406036 | 2_3:+57517231 | Msa0301430:CDS |
| CTGGAGCAGACTCAGGGTCC+TGG | 0.414763 | 2_3:-57513154 | None:intergenic |
| TATTCTAAAGGACCTAATAT+TGG | 0.416061 | 2_3:+57514942 | Msa0301430:CDS |
| ACTTATACAAATTTGAATCA+TGG | 0.424889 | 2_3:+57517444 | Msa0301430:three_prime_UTR |
| GTGCTTAATTTAAAATTAGA+GGG | 0.429823 | 2_3:-57517361 | None:intergenic |
| GTTAGTGCAACTTTCCCTTA+AGG | 0.430898 | 2_3:-57517304 | None:intergenic |
| CATTAAAGCATAGTTAGTTA+TGG | 0.435204 | 2_3:+57517255 | Msa0301430:exon |
| CTGTAATAAGGTGGTGGTGG+TGG | 0.437759 | 2_3:-57513113 | None:intergenic |
| TCTTTGTAAAGCCTGTAATA+AGG | 0.439294 | 2_3:-57513125 | None:intergenic |
| ATTAACAACAACTAACCATA+AGG | 0.461646 | 2_3:-57517383 | None:intergenic |
| GTGTTGCCAATGACTCGTTA+AGG | 0.463201 | 2_3:-57517224 | None:intergenic |
| AGAAAGAGAGACGAAGAGAA+AGG | 0.469004 | 2_3:+57512174 | Msa0301430:five_prime_UTR |
| ACTCCTTGTTCTTCCAAGCT+TGG | 0.471721 | 2_3:-57514909 | None:intergenic |
| AAGAATCCTTAACGAGTCAT+TGG | 0.477983 | 2_3:+57517218 | Msa0301430:CDS |
| CAAATATAAGTTCCTTCAAT+CGG | 0.478209 | 2_3:-57513188 | None:intergenic |
| GAGCCTCCACCACCGATTGA+AGG | 0.480913 | 2_3:+57513176 | Msa0301430:CDS |
| TCTTTGTTGATTTGATGAAA+AGG | 0.492329 | 2_3:-57517478 | None:intergenic |
| GGTGGTGAGATCGAGAGAGC+TGG | 0.506044 | 2_3:-57512208 | None:intergenic |
| GAAAGAGAGACGAAGAGAAA+GGG | 0.506564 | 2_3:+57512175 | Msa0301430:five_prime_UTR |
| TAGGTCCTTTAGAATAGAGT+TGG | 0.518443 | 2_3:-57514935 | None:intergenic |
| ACTCTCCTTGCATATTGTGA+TGG | 0.520397 | 2_3:-57515827 | None:intergenic |
| TCCGGCTAGTGTGAAGGCGG+TGG | 0.521072 | 2_3:-57512226 | None:intergenic |
| GTTCCTTCAATCGGTGGTGG+AGG | 0.523884 | 2_3:-57513179 | None:intergenic |
| GAGGCTCTGGAGCAGACTCA+GGG | 0.526066 | 2_3:-57513160 | None:intergenic |
| TAGTGATGTTCTACCAAGCT+TGG | 0.528638 | 2_3:+57514896 | Msa0301430:CDS |
| GTACGCCAACTCTATTCTAA+AGG | 0.536469 | 2_3:+57514930 | Msa0301430:CDS |
| TCAATAAACAAAGACAATCA+TGG | 0.545525 | 2_3:+57517278 | Msa0301430:three_prime_UTR |
| TGTAATAAGGTGGTGGTGGT+GGG | 0.546044 | 2_3:-57513112 | None:intergenic |
| GAGGACGCAGAGAATTCAAA+AGG | 0.547381 | 2_3:-57515886 | None:intergenic |
| GTCGGAGTGATGCGCCGGCA+AGG | 0.551219 | 2_3:-57512250 | None:intergenic |
| CACTTGTCGGAGTGATGCGC+CGG | 0.552056 | 2_3:-57512255 | None:intergenic |
| TGTTGATTTGATGAAAAGGA+CGG | 0.552315 | 2_3:-57517474 | None:intergenic |
| CAAGGTTCCGGCTAGTGTGA+AGG | 0.557381 | 2_3:-57512232 | None:intergenic |
| TAAGTTCCTTCAATCGGTGG+TGG | 0.561411 | 2_3:-57513182 | None:intergenic |
| GGAACTTATATTTGTTTCGG+AGG | 0.567063 | 2_3:+57513197 | Msa0301430:CDS |
| ACCACCGCCTTCACACTAGC+CGG | 0.569220 | 2_3:+57512225 | Msa0301430:five_prime_UTR |
| GTGGTGAGATCGAGAGAGCT+GGG | 0.574777 | 2_3:-57512207 | None:intergenic |
| TGCTTAATTTAAAATTAGAG+GGG | 0.576810 | 2_3:-57517360 | None:intergenic |
| CTACCAAGCTTGGAAGAACA+AGG | 0.582575 | 2_3:+57514906 | Msa0301430:CDS |
| AGCCTGTAATAAGGTGGTGG+TGG | 0.598331 | 2_3:-57513116 | None:intergenic |
| ATTTAGTGAAACCTTAAAGG+AGG | 0.601516 | 2_3:-57517326 | None:intergenic |
| GCTTAATTTAAAATTAGAGG+GGG | 0.608508 | 2_3:-57517359 | None:intergenic |
| TAGATTTCAAGAAGGAGCTG+AGG | 0.608725 | 2_3:+57515744 | Msa0301430:intron |
| AGAACGTCGTAAACAAGCTG+TGG | 0.618675 | 2_3:+57516063 | Msa0301430:CDS |
| AGAGACCATCACAATATGCA+AGG | 0.622612 | 2_3:+57515822 | Msa0301430:CDS |
| AGATCATTGTATACCTGATG+AGG | 0.623348 | 2_3:-57515905 | None:intergenic |
| ATATAAGTTCCTTCAATCGG+TGG | 0.635000 | 2_3:-57513185 | None:intergenic |
| GCTTTACAAAGATTACGTCC+AGG | 0.635871 | 2_3:+57513136 | Msa0301430:CDS |
| TTGTAAAGCCTGTAATAAGG+TGG | 0.646875 | 2_3:-57513122 | None:intergenic |
| TAAAGCCTGTAATAAGGTGG+TGG | 0.655388 | 2_3:-57513119 | None:intergenic |
| GGTTCCGGCTAGTGTGAAGG+CGG | 0.659319 | 2_3:-57512229 | None:intergenic |
| ACGTCGTAAACAAGCTGTGG+AGG | 0.660694 | 2_3:+57516066 | Msa0301430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTATGTGTAATTTAA+TGG | + | chr2_3:57513403-57513422 | Msa0301430:intron | 10.0% |
| !! | TGAAATTAAAAAAAAAAATC+AGG | - | chr2_3:57516117-57516136 | None:intergenic | 10.0% |
| !!! | TGTTATTCATATTTTAATTA+TGG | + | chr2_3:57516549-57516568 | Msa0301430:intron | 10.0% |
| !!! | TATCATTATTACTTTGATTT+TGG | + | chr2_3:57512398-57512417 | Msa0301430:intron | 15.0% |
| !!! | AATTAGTATTTATTTTTACC+TGG | + | chr2_3:57513428-57513447 | Msa0301430:intron | 15.0% |
| !!! | AACAGCTTTTTTTTTTTAAA+GGG | - | chr2_3:57513963-57513982 | None:intergenic | 15.0% |
| !!! | TAACAGCTTTTTTTTTTTAA+AGG | - | chr2_3:57513964-57513983 | None:intergenic | 15.0% |
| !! | AAAGGAAAAAAATAATGTTA+TGG | - | chr2_3:57514239-57514258 | None:intergenic | 15.0% |
| !!! | TTTTATAAACTACTTAAATG+TGG | - | chr2_3:57514366-57514385 | None:intergenic | 15.0% |
| !! | ATGAAACAAATTTCAATAAA+GGG | - | chr2_3:57514526-57514545 | None:intergenic | 15.0% |
| !! | TATAATGAAAATTTCAGAAA+CGG | - | chr2_3:57515986-57516005 | None:intergenic | 15.0% |
| !! | ATATCATGTATTTACTTTAT+AGG | + | chr2_3:57516003-57516022 | Msa0301430:intron | 15.0% |
| !!! | ATTCATATTTTAATTATGGA+AGG | + | chr2_3:57516553-57516572 | Msa0301430:intron | 15.0% |
| !!! | AAAAAGTACAATCTATATAA+AGG | - | chr2_3:57516582-57516601 | None:intergenic | 15.0% |
| !! | AATGTAGTTAAAATTGATAA+TGG | + | chr2_3:57516818-57516837 | Msa0301430:intron | 15.0% |
| !!! | TAATTTTTTTATGATACGTA+TGG | + | chr2_3:57517119-57517138 | Msa0301430:intron | 15.0% |
| !!! | AAATGATGTTTTTATGTTTT+GGG | + | chr2_3:57517416-57517435 | Msa0301430:three_prime_UTR | 15.0% |
| !!! | TTTGAATAATTCTAAAACAG+CGG | - | chr2_3:57512299-57512318 | None:intergenic | 20.0% |
| !! | AGTAATAATGATAGTTTACA+AGG | - | chr2_3:57512391-57512410 | None:intergenic | 20.0% |
| !!! | AAAAAATCACGTTTTAGATT+GGG | - | chr2_3:57512552-57512571 | None:intergenic | 20.0% |
| !!! | AAAAAAATCACGTTTTAGAT+TGG | - | chr2_3:57512553-57512572 | None:intergenic | 20.0% |
| !!! | CAATTAGAAGATTTTTGTTA+TGG | + | chr2_3:57513076-57513095 | Msa0301430:exon | 20.0% |
| !! | TAATGATATCAAAATTGCAA+GGG | - | chr2_3:57513246-57513265 | None:intergenic | 20.0% |
| !! | ATAATGATATCAAAATTGCA+AGG | - | chr2_3:57513247-57513266 | None:intergenic | 20.0% |
| !!! | TTGCAATTTTGATATCATTA+TGG | + | chr2_3:57513246-57513265 | Msa0301430:intron | 20.0% |
| !!! | AATTAGTTTAACATAGCTTA+TGG | - | chr2_3:57513658-57513677 | None:intergenic | 20.0% |
| !!! | AAAAAAGTTTCACTATGTTT+TGG | + | chr2_3:57513720-57513739 | Msa0301430:intron | 20.0% |
| !!! | ATTGTAATTAAGTGTTTCTA+GGG | - | chr2_3:57513795-57513814 | None:intergenic | 20.0% |
| !! | TATTGTAATTAAGTGTTTCT+AGG | - | chr2_3:57513796-57513815 | None:intergenic | 20.0% |
| !! | TAATTACAATATTAATCCGA+AGG | + | chr2_3:57513805-57513824 | Msa0301430:intron | 20.0% |
| !! | AATTACAATATTAATCCGAA+GGG | + | chr2_3:57513806-57513825 | Msa0301430:intron | 20.0% |
| !!! | TAATGTTATGGAATACTTTT+GGG | - | chr2_3:57514227-57514246 | None:intergenic | 20.0% |
| !!! | ATAATGTTATGGAATACTTT+TGG | - | chr2_3:57514228-57514247 | None:intergenic | 20.0% |
| !! | AAGTAGTTTATAAAAAGTAG+TGG | + | chr2_3:57514371-57514390 | Msa0301430:intron | 20.0% |
| !! | AGTAGTTTATAAAAAGTAGT+GGG | + | chr2_3:57514372-57514391 | Msa0301430:intron | 20.0% |
| !! | CATGAAACAAATTTCAATAA+AGG | - | chr2_3:57514527-57514546 | None:intergenic | 20.0% |
| !! | ATTTGTTTCATGAGAATTAA+AGG | + | chr2_3:57514535-57514554 | Msa0301430:intron | 20.0% |
| !! | TTAAACTCTAAATTGATTGT+AGG | + | chr2_3:57514569-57514588 | Msa0301430:intron | 20.0% |
| !! | TAAACTCTAAATTGATTGTA+GGG | + | chr2_3:57514570-57514589 | Msa0301430:intron | 20.0% |
| !! | TAGGAATGATATCATTAAAT+AGG | + | chr2_3:57514598-57514617 | Msa0301430:intron | 20.0% |
| !!! | TTGTTTCACATTTTTCATTT+AGG | + | chr2_3:57515472-57515491 | Msa0301430:intron | 20.0% |
| !! | AAAAAGATTACAAAAAGAGA+AGG | - | chr2_3:57515499-57515518 | None:intergenic | 20.0% |
| !!! | TTTTTCCGTTTATATATACA+TGG | + | chr2_3:57515515-57515534 | Msa0301430:intron | 20.0% |
| !!! | TTTTCCGTTTATATATACAT+GGG | + | chr2_3:57515516-57515535 | Msa0301430:intron | 20.0% |
| !!! | ATTTTTTTCTTCAGACAAAA+AGG | - | chr2_3:57515563-57515582 | None:intergenic | 20.0% |
| !! | ATAATGAAAATTTCAGAAAC+GGG | - | chr2_3:57515985-57516004 | None:intergenic | 20.0% |
| !!! | TTAGTTCATTCTTTTGAAAA+TGG | + | chr2_3:57516218-57516237 | Msa0301430:intron | 20.0% |
| !! | AACATGTAGAAATAAGAATT+AGG | - | chr2_3:57516427-57516446 | None:intergenic | 20.0% |
| !!! | TTAATGAAAGAATTGATTTC+TGG | + | chr2_3:57516702-57516721 | Msa0301430:intron | 20.0% |
| !!! | TGCTTAATTTAAAATTAGAG+GGG | - | chr2_3:57517363-57517382 | None:intergenic | 20.0% |
| !!! | GTGCTTAATTTAAAATTAGA+GGG | - | chr2_3:57517364-57517383 | None:intergenic | 20.0% |
| !!! | ATTTTAAATTAAGCACCTTA+TGG | + | chr2_3:57517368-57517387 | Msa0301430:three_prime_UTR | 20.0% |
| !!! | CAAATGATGTTTTTATGTTT+TGG | + | chr2_3:57517415-57517434 | Msa0301430:three_prime_UTR | 20.0% |
| !! | ACTTATACAAATTTGAATCA+TGG | + | chr2_3:57517444-57517463 | Msa0301430:three_prime_UTR | 20.0% |
| ! | CTAAAACTAAAAACTAGTTC+AGG | + | chr2_3:57512145-57512164 | Msa0301430:five_prime_UTR | 25.0% |
| ! | CTCACAATTCAATTATATTC+TGG | + | chr2_3:57512472-57512491 | Msa0301430:intron | 25.0% |
| ! | AACCCTAAATCTTAAAGATA+CGG | - | chr2_3:57512613-57512632 | None:intergenic | 25.0% |
| ! | GAGAATGTGTTAAAAAAATC+TGG | + | chr2_3:57512662-57512681 | Msa0301430:intron | 25.0% |
| !! | ATCTGGTTTGAAAAGAAAAT+CGG | + | chr2_3:57512679-57512698 | Msa0301430:intron | 25.0% |
| !!! | AAAGAAAATCGGTTTGAATT+TGG | + | chr2_3:57512690-57512709 | Msa0301430:intron | 25.0% |
| !! | TTAACCAGTTTTTGTTAAAG+TGG | + | chr2_3:57512781-57512800 | Msa0301430:intron | 25.0% |
| ! | AAAACCACTTTAACAAAAAC+TGG | - | chr2_3:57512788-57512807 | None:intergenic | 25.0% |
| ! | ACTGAACTGAATTGTATTAA+CGG | - | chr2_3:57512827-57512846 | None:intergenic | 25.0% |
| ! | CAAATATAAGTTCCTTCAAT+CGG | - | chr2_3:57513191-57513210 | None:intergenic | 25.0% |
| ! | GAAGGAACTTATATTTGTTT+CGG | + | chr2_3:57513194-57513213 | Msa0301430:CDS | 25.0% |
| !! | AAGCAAATAAAAGCTCTTTT+GGG | - | chr2_3:57513515-57513534 | None:intergenic | 25.0% |
| ! | TAGAAAGATAAGGTCAAAAT+AGG | - | chr2_3:57513596-57513615 | None:intergenic | 25.0% |
| ! | ATTACAATATTAATCCGAAG+GGG | + | chr2_3:57513807-57513826 | Msa0301430:intron | 25.0% |
| ! | GGAAATCTTAACCAAATAAT+TGG | - | chr2_3:57513942-57513961 | None:intergenic | 25.0% |
| ! | ATAATATTGTCGTCTAAACA+TGG | + | chr2_3:57513983-57514002 | Msa0301430:intron | 25.0% |
| ! | TAATATTGTCGTCTAAACAT+GGG | + | chr2_3:57513984-57514003 | Msa0301430:intron | 25.0% |
| ! | CTATTTACTATCTAGTTGTT+TGG | + | chr2_3:57514009-57514028 | Msa0301430:intron | 25.0% |
| !!! | TTTGGCATGTAATTTTTTTG+TGG | + | chr2_3:57514027-57514046 | Msa0301430:intron | 25.0% |
| !!! | AATTTTTTTGTGGTTGTGAT+CGG | + | chr2_3:57514037-57514056 | Msa0301430:intron | 25.0% |
| !!! | TTTGGCATGTAATTTTTTTG+TGG | + | chr2_3:57514027-57514046 | Msa0301430:intron | 25.0% |
| !!! | AATTTTTTTGTGGTTGTGAT+CGG | + | chr2_3:57514037-57514056 | Msa0301430:intron | 25.0% |
| !!! | TTTCCATTTTTGAAGTCTTT+GGG | - | chr2_3:57514144-57514163 | None:intergenic | 25.0% |
| !!! | TTTTCCATTTTTGAAGTCTT+TGG | - | chr2_3:57514145-57514164 | None:intergenic | 25.0% |
| ! | CAATACTCATTTGATATTAC+CGG | + | chr2_3:57514186-57514205 | Msa0301430:intron | 25.0% |
| ! | ATGAACTAGAGAAATTTCAA+AGG | - | chr2_3:57514257-57514276 | None:intergenic | 25.0% |
| ! | AATTTCAATAAAGGGTAGTT+TGG | - | chr2_3:57514518-57514537 | None:intergenic | 25.0% |
| ! | TCATGAGAATTAAAGGTTAT+TGG | + | chr2_3:57514542-57514561 | Msa0301430:intron | 25.0% |
| !! | GTTAAGATTTGCGTATATTT+TGG | + | chr2_3:57514629-57514648 | Msa0301430:intron | 25.0% |
| !! | TGCTGTTTATAATCTTTATC+AGG | + | chr2_3:57514673-57514692 | Msa0301430:intron | 25.0% |
| !! | TATTCTAAAGGACCTAATAT+TGG | + | chr2_3:57514942-57514961 | Msa0301430:CDS | 25.0% |
| ! | AACCATCATAAAAGATTTAG+AGG | + | chr2_3:57515040-57515059 | Msa0301430:intron | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | - | chr2_3:57515080-57515099 | None:intergenic | 25.0% |
| !!! | TTCTTTTGATTAACCTCTTT+TGG | + | chr2_3:57515446-57515465 | Msa0301430:intron | 25.0% |
| ! | TTAATAATGCCTAAAAGATC+AGG | - | chr2_3:57515629-57515648 | None:intergenic | 25.0% |
| ! | TTAGGCATTATTAACTTCAT+AGG | + | chr2_3:57515635-57515654 | Msa0301430:intron | 25.0% |
| ! | TAGGCATTATTAACTTCATA+GGG | + | chr2_3:57515636-57515655 | Msa0301430:intron | 25.0% |
| ! | AAGGTAAGATGTTAACTATA+AGG | - | chr2_3:57515721-57515740 | None:intergenic | 25.0% |
| !! | ACCTTTTATAGATTTCAAGA+AGG | + | chr2_3:57515736-57515755 | Msa0301430:intron | 25.0% |
| ! | TCCTTCTTGAAATCTATAAA+AGG | - | chr2_3:57515740-57515759 | None:intergenic | 25.0% |
| ! | ATATAAACTTGCCTTTGATT+TGG | + | chr2_3:57515942-57515961 | Msa0301430:intron | 25.0% |
| ! | AATAAGTTAAGGTTGTTTAC+TGG | - | chr2_3:57516288-57516307 | None:intergenic | 25.0% |
| ! | TAAACAACCTTAACTTATTC+AGG | + | chr2_3:57516289-57516308 | Msa0301430:intron | 25.0% |
| ! | AAACAACCTTAACTTATTCA+GGG | + | chr2_3:57516290-57516309 | Msa0301430:intron | 25.0% |
| !!! | TCCTCTTGTATTTCTATTTT+GGG | - | chr2_3:57516335-57516354 | None:intergenic | 25.0% |
| ! | GTAGAAATAAGAATTAGGAT+AGG | - | chr2_3:57516422-57516441 | None:intergenic | 25.0% |
| !! | TAACTTATGTTCTAGCTATT+AGG | - | chr2_3:57516493-57516512 | None:intergenic | 25.0% |
| ! | GTATTCCATTAGAAAAAGTT+TGG | - | chr2_3:57516869-57516888 | None:intergenic | 25.0% |
| ! | CATAACTAACTATGCTTTAA+TGG | - | chr2_3:57517257-57517276 | None:intergenic | 25.0% |
| ! | CATTAAAGCATAGTTAGTTA+TGG | + | chr2_3:57517255-57517274 | Msa0301430:exon | 25.0% |
| ! | TCAATAAACAAAGACAATCA+TGG | + | chr2_3:57517278-57517297 | Msa0301430:three_prime_UTR | 25.0% |
| ! | GTTATTTAGTGAAACCTTAA+AGG | - | chr2_3:57517332-57517351 | None:intergenic | 25.0% |
| !! | GCTTAATTTAAAATTAGAGG+GGG | - | chr2_3:57517362-57517381 | None:intergenic | 25.0% |
| !! | GGTGCTTAATTTAAAATTAG+AGG | - | chr2_3:57517365-57517384 | None:intergenic | 25.0% |
| ! | ATTAACAACAACTAACCATA+AGG | - | chr2_3:57517386-57517405 | None:intergenic | 25.0% |
| !!! | TCTTTGTTGATTTGATGAAA+AGG | - | chr2_3:57517481-57517500 | None:intergenic | 25.0% |
| !! | AATAATTCTAAAACAGCGGA+GGG | - | chr2_3:57512295-57512314 | None:intergenic | 30.0% |
| ACCCTAAATCTTAAAGATAC+GGG | - | chr2_3:57512612-57512631 | None:intergenic | 30.0% | |
| ! | ACCGGTTTAAAATTACAAAC+CGG | - | chr2_3:57512731-57512750 | None:intergenic | 30.0% |
| ACTGAATTGTATTAACGGTT+CGG | - | chr2_3:57512822-57512841 | None:intergenic | 30.0% | |
| ATCAACGCAAACAATGAAAT+GGG | + | chr2_3:57512881-57512900 | Msa0301430:intron | 30.0% | |
| !! | GAAGATTTTTGTTATGGCAA+CGG | + | chr2_3:57513082-57513101 | Msa0301430:exon | 30.0% |
| TCTTTGTAAAGCCTGTAATA+AGG | - | chr2_3:57513128-57513147 | None:intergenic | 30.0% | |
| ! | TGACACTTGAATAGACATTT+TGG | + | chr2_3:57513349-57513368 | Msa0301430:intron | 30.0% |
| !! | TTGAATAGACATTTTGGAAG+AGG | + | chr2_3:57513355-57513374 | Msa0301430:intron | 30.0% |
| ! | GAAGCAAATAAAAGCTCTTT+TGG | - | chr2_3:57513516-57513535 | None:intergenic | 30.0% |
| CACAAACACTTAGAAAGATA+AGG | - | chr2_3:57513606-57513625 | None:intergenic | 30.0% | |
| TATCTTTCTAAGTGTTTGTG+TGG | + | chr2_3:57513606-57513625 | Msa0301430:intron | 30.0% | |
| AGCTTATGAAAACAGCTTAT+AGG | + | chr2_3:57513697-57513716 | Msa0301430:intron | 30.0% | |
| !! | TTAAGTGTTTCTAGGGTAAA+GGG | - | chr2_3:57513788-57513807 | None:intergenic | 30.0% |
| !! | ATTAAGTGTTTCTAGGGTAA+AGG | - | chr2_3:57513789-57513808 | None:intergenic | 30.0% |
| ! | CCAAACAATTTGAAGTCTTT+GGG | - | chr2_3:57514078-57514097 | None:intergenic | 30.0% |
| !! | AAAAATGGAAAAGTACCAAC+AGG | + | chr2_3:57514153-57514172 | Msa0301430:intron | 30.0% |
| CGGTAATATCAAATGAGTAT+TGG | - | chr2_3:57514188-57514207 | None:intergenic | 30.0% | |
| !! | AATTGATTGTAGGGCATTTT+AGG | + | chr2_3:57514579-57514598 | Msa0301430:intron | 30.0% |
| ! | ACAGCAAAATAATCCAGTTT+TGG | - | chr2_3:57514659-57514678 | None:intergenic | 30.0% |
| TAAGATAGCCTACCAATATT+AGG | - | chr2_3:57514957-57514976 | None:intergenic | 30.0% | |
| ATGCTCTGTTAAATTTGAAG+AGG | + | chr2_3:57514987-57515006 | Msa0301430:intron | 30.0% | |
| TGTTAAATTTGAAGAGGTAG+AGG | + | chr2_3:57514993-57515012 | Msa0301430:intron | 30.0% | |
| ! | TTTTATGATGGTTTCTCGAA+TGG | - | chr2_3:57515033-57515052 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTATGA+TGG | - | chr2_3:57515045-57515064 | None:intergenic | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | chr2_3:57515084-57515103 | Msa0301430:intron | 30.0% |
| TGTTGTTGCATAGTGAAATT+TGG | + | chr2_3:57515360-57515379 | Msa0301430:intron | 30.0% | |
| TGTGAAACAAAAACCAAAAG+AGG | - | chr2_3:57515462-57515481 | None:intergenic | 30.0% | |
| ! | AGAATTGCAACTACACATTT+TGG | + | chr2_3:57515778-57515797 | Msa0301430:CDS | 30.0% |
| ! | GTGATGCAAATTTTTGAACA+CGG | - | chr2_3:57515867-57515886 | None:intergenic | 30.0% |
| AGAACCTTCTACAAATTTGT+TGG | + | chr2_3:57516151-57516170 | Msa0301430:intron | 30.0% | |
| CATACCAACAAATTTGTAGA+AGG | - | chr2_3:57516158-57516177 | None:intergenic | 30.0% | |
| TTGTAAGTTGTAACCTTCAT+GGG | + | chr2_3:57516179-57516198 | Msa0301430:intron | 30.0% | |
| CAAAAGAATGAACTAACTTG+TGG | - | chr2_3:57516214-57516233 | None:intergenic | 30.0% | |
| TCCCAAAATAGAAATACAAG+AGG | + | chr2_3:57516331-57516350 | Msa0301430:intron | 30.0% | |
| !! | CTCCTCTTGTATTTCTATTT+TGG | - | chr2_3:57516336-57516355 | None:intergenic | 30.0% |
| TGCAAAACCTGAAGAATTTA+AGG | + | chr2_3:57516612-57516631 | Msa0301430:intron | 30.0% | |
| ! | CACTTTTCCATTTTAAACTG+TGG | + | chr2_3:57516766-57516785 | Msa0301430:intron | 30.0% |
| ! | TTTCCATTTTAAACTGTGGA+TGG | + | chr2_3:57516770-57516789 | Msa0301430:intron | 30.0% |
| TTAGAAAAAGTTTGGCAACA+GGG | - | chr2_3:57516861-57516880 | None:intergenic | 30.0% | |
| ATTAGAAAAAGTTTGGCAAC+AGG | - | chr2_3:57516862-57516881 | None:intergenic | 30.0% | |
| !! | TGTTGCCAAACTTTTTCTAA+TGG | + | chr2_3:57516861-57516880 | Msa0301430:intron | 30.0% |
| AAAATGTACAAAGATACACC+AGG | - | chr2_3:57516932-57516951 | None:intergenic | 30.0% | |
| AAATGACTGTAATAGTGCTT+TGG | + | chr2_3:57516970-57516989 | Msa0301430:intron | 30.0% | |
| ! | ATGGTTGCTCATATCAATTT+TGG | - | chr2_3:57517038-57517057 | None:intergenic | 30.0% |
| CTGAAAAGAAAAGAGAAAGT+AGG | - | chr2_3:57517180-57517199 | None:intergenic | 30.0% | |
| ! | CTACTTTCTCTTTTCTTTTC+AGG | + | chr2_3:57517178-57517197 | Msa0301430:intron | 30.0% |
| ATTTAGTGAAACCTTAAAGG+AGG | - | chr2_3:57517329-57517348 | None:intergenic | 30.0% | |
| !! | TGTTGATTTGATGAAAAGGA+CGG | - | chr2_3:57517477-57517496 | None:intergenic | 30.0% |
| GAATAAGATGACTCACTTGT+CGG | - | chr2_3:57512271-57512290 | None:intergenic | 35.0% | |
| !! | GAATAATTCTAAAACAGCGG+AGG | - | chr2_3:57512296-57512315 | None:intergenic | 35.0% |
| ATGATAGTTTACAAGGTGCA+AGG | - | chr2_3:57512384-57512403 | None:intergenic | 35.0% | |
| !! | ACCCCGTATCTTTAAGATTT+AGG | + | chr2_3:57512607-57512626 | Msa0301430:intron | 35.0% |
| CCCTAAATCTTAAAGATACG+GGG | - | chr2_3:57512611-57512630 | None:intergenic | 35.0% | |
| !! | CCCCGTATCTTTAAGATTTA+GGG | + | chr2_3:57512608-57512627 | Msa0301430:intron | 35.0% |
| TTGGTTTAAATGAACTGAGC+CGG | + | chr2_3:57512709-57512728 | Msa0301430:intron | 35.0% | |
| !!! | GCCGGTTTGTAATTTTAAAC+CGG | + | chr2_3:57512727-57512746 | Msa0301430:intron | 35.0% |
| !!! | AAACCGGTTTTGAACTGAAT+TGG | + | chr2_3:57512743-57512762 | Msa0301430:intron | 35.0% |
| GTTCCAATTCAGTTCAAAAC+CGG | - | chr2_3:57512749-57512768 | None:intergenic | 35.0% | |
| CATCAACGCAAACAATGAAA+TGG | + | chr2_3:57512880-57512899 | Msa0301430:intron | 35.0% | |
| CAACTTAACCATAACAGGAA+CGG | - | chr2_3:57512935-57512954 | None:intergenic | 35.0% | |
| AGACACAACTTAACCATAAC+AGG | - | chr2_3:57512940-57512959 | None:intergenic | 35.0% | |
| GATGCATCTATGATCTTTGA+AGG | + | chr2_3:57513049-57513068 | Msa0301430:five_prime_UTR | 35.0% | |
| TTGTAAAGCCTGTAATAAGG+TGG | - | chr2_3:57513125-57513144 | None:intergenic | 35.0% | |
| ATATAAGTTCCTTCAATCGG+TGG | - | chr2_3:57513188-57513207 | None:intergenic | 35.0% | |
| GGAACTTATATTTGTTTCGG+AGG | + | chr2_3:57513197-57513216 | Msa0301430:CDS | 35.0% | |
| !!! | TTTTTACCTGGTTTTAGCTC+TGG | + | chr2_3:57513440-57513459 | Msa0301430:intron | 35.0% |
| CCCAAAGACTTCAAATTGTT+TGG | + | chr2_3:57514075-57514094 | Msa0301430:intron | 35.0% | |
| ! | GCCAAACAATTTGAAGTCTT+TGG | - | chr2_3:57514079-57514098 | None:intergenic | 35.0% |
| AAGCCCAAAGACTTCAAAAA+TGG | + | chr2_3:57514138-57514157 | Msa0301430:intron | 35.0% | |
| TATTGGTATCAGATACCTGT+TGG | - | chr2_3:57514171-57514190 | None:intergenic | 35.0% | |
| CTCATTTGATATTACCGGAT+AGG | + | chr2_3:57514191-57514210 | Msa0301430:intron | 35.0% | |
| !!! | TGGAATACTTTTGGGACTTT+GGG | - | chr2_3:57514219-57514238 | None:intergenic | 35.0% |
| !!! | ATGGAATACTTTTGGGACTT+TGG | - | chr2_3:57514220-57514239 | None:intergenic | 35.0% |
| ! | TAGTTCATCTTCGACAGTTT+TGG | + | chr2_3:57514269-57514288 | Msa0301430:intron | 35.0% |
| !! | ATATTTTGGACCACCAAAAC+TGG | + | chr2_3:57514643-57514662 | Msa0301430:intron | 35.0% |
| !! | GCAAAATAATCCAGTTTTGG+TGG | - | chr2_3:57514656-57514675 | None:intergenic | 35.0% |
| ! | ATTTTATGCAGAAGCCTCTT+TGG | + | chr2_3:57514818-57514837 | Msa0301430:intron | 35.0% |
| !! | TAGGTCCTTTAGAATAGAGT+TGG | - | chr2_3:57514938-57514957 | None:intergenic | 35.0% |
| CTAAAGGACCTAATATTGGT+AGG | + | chr2_3:57514946-57514965 | Msa0301430:intron | 35.0% | |
| ! | GTTTCTCGAATGGTTTTCTT+AGG | - | chr2_3:57515023-57515042 | None:intergenic | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr2_3:57515052-57515071 | Msa0301430:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr2_3:57515064-57515083 | Msa0301430:intron | 35.0% |
| AGTGTTTGACAACACTACAA+AGG | - | chr2_3:57515251-57515270 | None:intergenic | 35.0% | |
| TTTGTAGTGTTGTCAAACAC+TGG | + | chr2_3:57515250-57515269 | Msa0301430:intron | 35.0% | |
| ! | ATTTGGACAAACCGCTATTT+TGG | + | chr2_3:57515377-57515396 | Msa0301430:intron | 35.0% |
| !! | TTTGGACAAACCGCTATTTT+GGG | + | chr2_3:57515378-57515397 | Msa0301430:intron | 35.0% |
| CCAGCCCATGTATATATAAA+CGG | - | chr2_3:57515523-57515542 | None:intergenic | 35.0% | |
| ! | TTTTCTTCAGACAAAAAGGC+TGG | - | chr2_3:57515559-57515578 | None:intergenic | 35.0% |
| ACTACACACAGTCACATATT+AGG | - | chr2_3:57515593-57515612 | None:intergenic | 35.0% | |
| TTCATAGGGAAATGCTGAAT+TGG | + | chr2_3:57515650-57515669 | Msa0301430:intron | 35.0% | |
| AGATCATTGTATACCTGATG+AGG | - | chr2_3:57515908-57515927 | None:intergenic | 35.0% | |
| ! | AGCAACTCTGATTCACATTT+TGG | + | chr2_3:57516030-57516049 | Msa0301430:CDS | 35.0% |
| CTTGTAAGTTGTAACCTTCA+TGG | + | chr2_3:57516178-57516197 | Msa0301430:intron | 35.0% | |
| !! | AGACTCTAACTTTTTCTCAC+TGG | + | chr2_3:57516257-57516276 | Msa0301430:intron | 35.0% |
| !! | GACTCTAACTTTTTCTCACT+GGG | + | chr2_3:57516258-57516277 | Msa0301430:intron | 35.0% |
| TGACTTCCCTGAATAAGTTA+AGG | - | chr2_3:57516299-57516318 | None:intergenic | 35.0% | |
| TCAGTTAAGGTTGTTAGTGT+TGG | - | chr2_3:57516368-57516387 | None:intergenic | 35.0% | |
| TGTATCTGGTGAATCAGTTA+AGG | - | chr2_3:57516381-57516400 | None:intergenic | 35.0% | |
| TGCTAGTTAGTTGTTGTATC+TGG | - | chr2_3:57516395-57516414 | None:intergenic | 35.0% | |
| ! | TCTACATGTTTTCCTACTCT+TGG | + | chr2_3:57516437-57516456 | Msa0301430:intron | 35.0% |
| CATGAAAATGTTCCAAGAGT+AGG | - | chr2_3:57516452-57516471 | None:intergenic | 35.0% | |
| ! | ACTCTTGGAACATTTTCATG+AGG | + | chr2_3:57516452-57516471 | Msa0301430:intron | 35.0% |
| ! | TTATGTTCTAGCTATTAGGC+AGG | - | chr2_3:57516489-57516508 | None:intergenic | 35.0% |
| ! | AACCTGAAGAATTTAAGGCT+TGG | + | chr2_3:57516617-57516636 | Msa0301430:intron | 35.0% |
| AAAAACTAGTAAGCAGCCAT+GGG | - | chr2_3:57516665-57516684 | None:intergenic | 35.0% | |
| AAAAAACTAGTAAGCAGCCA+TGG | - | chr2_3:57516666-57516685 | None:intergenic | 35.0% | |
| CTTCCATCCACAGTTTAAAA+TGG | - | chr2_3:57516776-57516795 | None:intergenic | 35.0% | |
| AGGTATGATGCTATGATTTC+TGG | - | chr2_3:57516912-57516931 | None:intergenic | 35.0% | |
| AGAAATCATAGCATCATACC+TGG | + | chr2_3:57516911-57516930 | Msa0301430:intron | 35.0% | |
| !! | TAGTGCTTTGGAAACTTGAT+TGG | + | chr2_3:57516982-57517001 | Msa0301430:intron | 35.0% |
| !! | TACAAGAGAAGCATTGTCTT+TGG | - | chr2_3:57517091-57517110 | None:intergenic | 35.0% |
| !! | CTTTCTCTTTTCTTTTCAGG+AGG | + | chr2_3:57517181-57517200 | Msa0301430:intron | 35.0% |
| AAGAATCCTTAACGAGTCAT+TGG | + | chr2_3:57517218-57517237 | Msa0301430:CDS | 35.0% | |
| TTCTCTTCGTCTCTCTTTCT+CGG | - | chr2_3:57512174-57512193 | None:intergenic | 40.0% | |
| AGAAAGAGAGACGAAGAGAA+AGG | + | chr2_3:57512174-57512193 | Msa0301430:five_prime_UTR | 40.0% | |
| GAAAGAGAGACGAAGAGAAA+GGG | + | chr2_3:57512175-57512194 | Msa0301430:five_prime_UTR | 40.0% | |
| !!! | GATTTTGGTTCACGTTCTCA+TGG | + | chr2_3:57512413-57512432 | Msa0301430:intron | 40.0% |
| !! | TTTGCGTTGATGATGAGCTA+GGG | - | chr2_3:57512872-57512891 | None:intergenic | 40.0% |
| TGCAATTTCCGTTCCTGTTA+TGG | + | chr2_3:57512924-57512943 | Msa0301430:intron | 40.0% | |
| ATCTCCATGCATTCTTCATG+TGG | + | chr2_3:57512988-57513007 | Msa0301430:intron | 40.0% | |
| AATGCCACATGAAGAATGCA+TGG | - | chr2_3:57512995-57513014 | None:intergenic | 40.0% | |
| TAAAGCCTGTAATAAGGTGG+TGG | - | chr2_3:57513122-57513141 | None:intergenic | 40.0% | |
| GCTTTACAAAGATTACGTCC+AGG | + | chr2_3:57513136-57513155 | Msa0301430:CDS | 40.0% | |
| ! | CAAGTGTCACTGTAATAGCA+GGG | - | chr2_3:57513338-57513357 | None:intergenic | 40.0% |
| ! | TCAAGTGTCACTGTAATAGC+AGG | - | chr2_3:57513339-57513358 | None:intergenic | 40.0% |
| ! | TGTGCGTAATTCTGAAAGCT+TGG | + | chr2_3:57513465-57513484 | Msa0301430:intron | 40.0% |
| CATGACAACTTTGCTGCATT+TGG | + | chr2_3:57513554-57513573 | Msa0301430:intron | 40.0% | |
| TGGCAGCAACTCCAATTATT+TGG | + | chr2_3:57513928-57513947 | Msa0301430:intron | 40.0% | |
| !! | TTCATCTTCGACAGTTTTGG+TGG | + | chr2_3:57514272-57514291 | Msa0301430:intron | 40.0% |
| ! | TTTGGTGGAGACAAGGATTT+TGG | + | chr2_3:57514287-57514306 | Msa0301430:intron | 40.0% |
| CGCTATATATACACACACTC+TGG | + | chr2_3:57514408-57514427 | Msa0301430:intron | 40.0% | |
| TATCAGGCTGTGTTCAGTTT+AGG | + | chr2_3:57514689-57514708 | Msa0301430:intron | 40.0% | |
| ATCAGGCTGTGTTCAGTTTA+GGG | + | chr2_3:57514690-57514709 | Msa0301430:intron | 40.0% | |
| TGAGTTCAGTCTTGCAAAAC+AGG | + | chr2_3:57514741-57514760 | Msa0301430:intron | 40.0% | |
| GAGTTCAGTCTTGCAAAACA+GGG | + | chr2_3:57514742-57514761 | Msa0301430:intron | 40.0% | |
| ACGATATGATCACACCAAAG+AGG | - | chr2_3:57514835-57514854 | None:intergenic | 40.0% | |
| TAGTGATGTTCTACCAAGCT+TGG | + | chr2_3:57514896-57514915 | Msa0301430:CDS | 40.0% | |
| GTACGCCAACTCTATTCTAA+AGG | + | chr2_3:57514930-57514949 | Msa0301430:CDS | 40.0% | |
| ! | AAGCCTTATCCCATTAAGTG+GGG | - | chr2_3:57515133-57515152 | None:intergenic | 40.0% |
| ! | CAAGCCTTATCCCATTAAGT+GGG | - | chr2_3:57515134-57515153 | None:intergenic | 40.0% |
| ! | TCAAGCCTTATCCCATTAAG+TGG | - | chr2_3:57515135-57515154 | None:intergenic | 40.0% |
| AGTGACTGTTACAGATAGTG+TGG | + | chr2_3:57515194-57515213 | Msa0301430:intron | 40.0% | |
| GTGACTGTTACAGATAGTGT+GGG | + | chr2_3:57515195-57515214 | Msa0301430:intron | 40.0% | |
| CTGTCAAATAGCTGCTATAG+CGG | + | chr2_3:57515329-57515348 | Msa0301430:intron | 40.0% | |
| TCCAGAACATCCCAAAATAG+CGG | - | chr2_3:57515391-57515410 | None:intergenic | 40.0% | |
| CCGTTTATATATACATGGGC+TGG | + | chr2_3:57515520-57515539 | Msa0301430:intron | 40.0% | |
| TGTGTGTAGTCTAGACTTGT+GGG | + | chr2_3:57515603-57515622 | Msa0301430:intron | 40.0% | |
| TGGTCACAAAAGCCAATGTT+TGG | + | chr2_3:57515670-57515689 | Msa0301430:intron | 40.0% | |
| CTAGTAGAGACACCAAACAT+TGG | - | chr2_3:57515685-57515704 | None:intergenic | 40.0% | |
| TAGATTTCAAGAAGGAGCTG+AGG | + | chr2_3:57515744-57515763 | Msa0301430:intron | 40.0% | |
| AGAGACCATCACAATATGCA+AGG | + | chr2_3:57515822-57515841 | Msa0301430:CDS | 40.0% | |
| ACTCTCCTTGCATATTGTGA+TGG | - | chr2_3:57515830-57515849 | None:intergenic | 40.0% | |
| !! | ACCAGAAGCATCCAAATCAA+AGG | - | chr2_3:57515956-57515975 | None:intergenic | 40.0% |
| AAGCTGTGGAGGACATAAAT+AGG | + | chr2_3:57516077-57516096 | Msa0301430:CDS | 40.0% | |
| GTGGATTTAGTAACCCATGA+AGG | - | chr2_3:57516195-57516214 | None:intergenic | 40.0% | |
| GACCAAGCCTTAAATTCTTC+AGG | - | chr2_3:57516622-57516641 | None:intergenic | 40.0% | |
| ATGGGTGTATGAACCTATGA+GGG | - | chr2_3:57516647-57516666 | None:intergenic | 40.0% | |
| AAAAGTTTGGCAACAGGGTA+TGG | - | chr2_3:57516856-57516875 | None:intergenic | 40.0% | |
| AGACAATCATGGCAACCTTA+AGG | + | chr2_3:57517289-57517308 | Msa0301430:three_prime_UTR | 40.0% | |
| GACAATCATGGCAACCTTAA+GGG | + | chr2_3:57517290-57517309 | Msa0301430:three_prime_UTR | 40.0% | |
| GTTAGTGCAACTTTCCCTTA+AGG | - | chr2_3:57517307-57517326 | None:intergenic | 40.0% | |
| AGTTGCACTAACCTCCTTTA+AGG | + | chr2_3:57517315-57517334 | Msa0301430:three_prime_UTR | 40.0% | |
| !! | TTGCGTTGATGATGAGCTAG+GGG | - | chr2_3:57512871-57512890 | None:intergenic | 45.0% |
| !! | GTTTGCGTTGATGATGAGCT+AGG | - | chr2_3:57512873-57512892 | None:intergenic | 45.0% |
| !! | TGTAATAAGGTGGTGGTGGT+GGG | - | chr2_3:57513115-57513134 | None:intergenic | 45.0% |
| TAAGTTCCTTCAATCGGTGG+TGG | - | chr2_3:57513185-57513204 | None:intergenic | 45.0% | |
| ! | TCCCATCATGGCAGGATTTT+GGG | + | chr2_3:57513848-57513867 | Msa0301430:intron | 45.0% |
| TCCCAAAATCCTGCCATGAT+GGG | - | chr2_3:57513852-57513871 | None:intergenic | 45.0% | |
| TTCCCAAAATCCTGCCATGA+TGG | - | chr2_3:57513853-57513872 | None:intergenic | 45.0% | |
| !! | TCATGGCAGGATTTTGGGAA+TGG | + | chr2_3:57513853-57513872 | Msa0301430:intron | 45.0% |
| TGGGAATGGTTTGACTCATG+AGG | + | chr2_3:57513867-57513886 | Msa0301430:intron | 45.0% | |
| ACTCAAATGAGTGACCTCCT+AGG | + | chr2_3:57513901-57513920 | Msa0301430:intron | 45.0% | |
| TCAACCTAGCTCAAGGTATG+TGG | - | chr2_3:57514724-57514743 | None:intergenic | 45.0% | |
| ACTGAACTCAACCTAGCTCA+AGG | - | chr2_3:57514731-57514750 | None:intergenic | 45.0% | |
| CTACCAAGCTTGGAAGAACA+AGG | + | chr2_3:57514906-57514925 | Msa0301430:CDS | 45.0% | |
| ACTCCTTGTTCTTCCAAGCT+TGG | - | chr2_3:57514912-57514931 | None:intergenic | 45.0% | |
| CTTATCCCATTAAGTGGGGT+CGG | - | chr2_3:57515129-57515148 | None:intergenic | 45.0% | |
| !! | ACACTGGTGCTATAGCATTG+CGG | + | chr2_3:57515266-57515285 | Msa0301430:intron | 45.0% |
| !!! | ACCGCTATTTTGGGATGTTC+TGG | + | chr2_3:57515387-57515406 | Msa0301430:intron | 45.0% |
| GACAAAAAGGCTGGAGCTAA+AGG | - | chr2_3:57515550-57515569 | None:intergenic | 45.0% | |
| CTGTGTGTAGTCTAGACTTG+TGG | + | chr2_3:57515602-57515621 | Msa0301430:intron | 45.0% | |
| ! | ACTTGTGGGCCTGATCTTTT+AGG | + | chr2_3:57515617-57515636 | Msa0301430:intron | 45.0% |
| AAGGAGCTGAGGTCACTTAA+TGG | + | chr2_3:57515755-57515774 | Msa0301430:CDS | 45.0% | |
| GAGGACGCAGAGAATTCAAA+AGG | - | chr2_3:57515889-57515908 | None:intergenic | 45.0% | |
| !! | GCCTTTGATTTGGATGCTTC+TGG | + | chr2_3:57515952-57515971 | Msa0301430:intron | 45.0% |
| AGAACGTCGTAAACAAGCTG+TGG | + | chr2_3:57516063-57516082 | Msa0301430:CDS | 45.0% | |
| CATGGGTGTATGAACCTATG+AGG | - | chr2_3:57516648-57516667 | None:intergenic | 45.0% | |
| CTCATAGGTTCATACACCCA+TGG | + | chr2_3:57516646-57516665 | Msa0301430:intron | 45.0% | |
| TGGCAAAACTGGGCAAAGAA+GGG | - | chr2_3:57517065-57517084 | None:intergenic | 45.0% | |
| ATGGCAAAACTGGGCAAAGA+AGG | - | chr2_3:57517066-57517085 | None:intergenic | 45.0% | |
| ! | TTCTTTGCCCAGTTTTGCCA+TGG | + | chr2_3:57517065-57517084 | Msa0301430:intron | 45.0% |
| TCTTTGGCCATGGCAAAACT+GGG | - | chr2_3:57517075-57517094 | None:intergenic | 45.0% | |
| !! | AGAAGCATTGTCTTTGGCCA+TGG | - | chr2_3:57517085-57517104 | None:intergenic | 45.0% |
| GTGTTGCCAATGACTCGTTA+AGG | - | chr2_3:57517227-57517246 | None:intergenic | 45.0% | |
| GAGTCATTGGCAACACTTGA+TGG | + | chr2_3:57517231-57517250 | Msa0301430:CDS | 45.0% | |
| !! | TGCGTTGATGATGAGCTAGG+GGG | - | chr2_3:57512870-57512889 | None:intergenic | 50.0% |
| !! | CTGTAATAAGGTGGTGGTGG+TGG | - | chr2_3:57513116-57513135 | None:intergenic | 50.0% |
| CACCACCACCACCTTATTAC+AGG | + | chr2_3:57513114-57513133 | Msa0301430:CDS | 50.0% | |
| ! | AGCCTGTAATAAGGTGGTGG+TGG | - | chr2_3:57513119-57513138 | None:intergenic | 50.0% |
| CACATGCCAGAGCTAAAACC+AGG | - | chr2_3:57513449-57513468 | None:intergenic | 50.0% | |
| TCTCTAGCACTAAGCCCCTT+CGG | - | chr2_3:57513824-57513843 | None:intergenic | 50.0% | |
| GCTAGAGAAAGCTCCCATCA+TGG | + | chr2_3:57513836-57513855 | Msa0301430:intron | 50.0% | |
| ! | CTCCCATCATGGCAGGATTT+TGG | + | chr2_3:57513847-57513866 | Msa0301430:intron | 50.0% |
| TGAGTGACCTCCTAGGCATA+TGG | + | chr2_3:57513908-57513927 | Msa0301430:intron | 50.0% | |
| TGGGACTTTGGGTACCTATC+CGG | - | chr2_3:57514208-57514227 | None:intergenic | 50.0% | |
| !! | CGACAGTTTTGGTGGAGACA+AGG | + | chr2_3:57514280-57514299 | Msa0301430:intron | 50.0% |
| CCTAGCTCAAGGTATGTGGT+TGG | - | chr2_3:57514720-57514739 | None:intergenic | 50.0% | |
| CCAACCACATACCTTGAGCT+AGG | + | chr2_3:57514717-57514736 | Msa0301430:intron | 50.0% | |
| ATTAAGTGGGGTCGGCTACA+TGG | - | chr2_3:57515121-57515140 | None:intergenic | 50.0% | |
| ATGTAGCCGACCCCACTTAA+TGG | + | chr2_3:57515120-57515139 | Msa0301430:intron | 50.0% | |
| TGTAGCCGACCCCACTTAAT+GGG | + | chr2_3:57515121-57515140 | Msa0301430:intron | 50.0% | |
| CGACCCCACTTAATGGGATA+AGG | + | chr2_3:57515127-57515146 | Msa0301430:intron | 50.0% | |
| GAATTCTCTGCGTCCTCATC+AGG | + | chr2_3:57515892-57515911 | Msa0301430:CDS | 50.0% | |
| ACGTCGTAAACAAGCTGTGG+AGG | + | chr2_3:57516066-57516085 | Msa0301430:CDS | 50.0% | |
| GGTGTATGAACCTATGAGGG+AGG | - | chr2_3:57516644-57516663 | None:intergenic | 50.0% | |
| CTGGGCAAAGAAGGGAGAAA+TGG | - | chr2_3:57517057-57517076 | None:intergenic | 50.0% | |
| GTCTTTGGCCATGGCAAAAC+TGG | - | chr2_3:57517076-57517095 | None:intergenic | 50.0% | |
| GTGGTGAGATCGAGAGAGCT+GGG | - | chr2_3:57512210-57512229 | None:intergenic | 55.0% | |
| CAAGGTTCCGGCTAGTGTGA+AGG | - | chr2_3:57512235-57512254 | None:intergenic | 55.0% | |
| TGATGAGCTAGGGGGGTTCA+TGG | - | chr2_3:57512862-57512881 | None:intergenic | 55.0% | |
| !! | GCGTTGATGATGAGCTAGGG+GGG | - | chr2_3:57512869-57512888 | None:intergenic | 55.0% |
| ! | GTTCCTTCAATCGGTGGTGG+AGG | - | chr2_3:57513182-57513201 | None:intergenic | 55.0% |
| TCGGAGGCAGTTACACTGTG+AGG | + | chr2_3:57513213-57513232 | Msa0301430:intron | 55.0% | |
| GAGAAAGCTCCCATCATGGC+AGG | + | chr2_3:57513840-57513859 | Msa0301430:intron | 55.0% | |
| GTTGCTGCCATATGCCTAGG+AGG | - | chr2_3:57513918-57513937 | None:intergenic | 55.0% | |
| GGAGTTGCTGCCATATGCCT+AGG | - | chr2_3:57513921-57513940 | None:intergenic | 55.0% | |
| ! | AAGGCTTGGTCCTCCCTCAT+AGG | + | chr2_3:57516631-57516650 | Msa0301430:intron | 55.0% |
| GGTGGTGAGATCGAGAGAGC+TGG | - | chr2_3:57512211-57512230 | None:intergenic | 60.0% | |
| ACCACCGCCTTCACACTAGC+CGG | + | chr2_3:57512225-57512244 | Msa0301430:five_prime_UTR | 60.0% | |
| GGTTCCGGCTAGTGTGAAGG+CGG | - | chr2_3:57512232-57512251 | None:intergenic | 60.0% | |
| CACACTAGCCGGAACCTTGC+CGG | + | chr2_3:57512236-57512255 | Msa0301430:five_prime_UTR | 60.0% | |
| CACTTGTCGGAGTGATGCGC+CGG | - | chr2_3:57512258-57512277 | None:intergenic | 60.0% | |
| !! | GAGGCTCTGGAGCAGACTCA+GGG | - | chr2_3:57513163-57513182 | None:intergenic | 60.0% |
| !! | TCAATCGGTGGTGGAGGCTC+TGG | - | chr2_3:57513176-57513195 | None:intergenic | 60.0% |
| ! | GAGCCTCCACCACCGATTGA+AGG | + | chr2_3:57513176-57513195 | Msa0301430:CDS | 60.0% |
| TCCGGCTAGTGTGAAGGCGG+TGG | - | chr2_3:57512229-57512248 | None:intergenic | 65.0% | |
| ! | GTGATGCGCCGGCAAGGTTC+CGG | - | chr2_3:57512247-57512266 | None:intergenic | 65.0% |
| CTGGAGCAGACTCAGGGTCC+TGG | - | chr2_3:57513157-57513176 | None:intergenic | 65.0% | |
| !! | GGAGGCTCTGGAGCAGACTC+AGG | - | chr2_3:57513164-57513183 | None:intergenic | 65.0% |
| ! | GTCGGAGTGATGCGCCGGCA+AGG | - | chr2_3:57512253-57512272 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 57512137 | 57517519 | 57512137 | ID=Msa0301430;Name=Msa0301430 |
| chr2_3 | mRNA | 57512137 | 57517519 | 57512137 | ID=Msa0301430-mRNA-1;Parent=Msa0301430;Name=Msa0301430-mRNA-1;_AED=0.10;_eAED=0.10;_QI=197|1|1|1|0.8|0.66|6|259|168 |
| chr2_3 | exon | 57512137 | 57512274 | 57512137 | ID=Msa0301430-mRNA-1:exon:18542;Parent=Msa0301430-mRNA-1 |
| chr2_3 | exon | 57513036 | 57513229 | 57513036 | ID=Msa0301430-mRNA-1:exon:18543;Parent=Msa0301430-mRNA-1 |
| chr2_3 | exon | 57514894 | 57514963 | 57514894 | ID=Msa0301430-mRNA-1:exon:18544;Parent=Msa0301430-mRNA-1 |
| chr2_3 | exon | 57515747 | 57515913 | 57515747 | ID=Msa0301430-mRNA-1:exon:18545;Parent=Msa0301430-mRNA-1 |
| chr2_3 | exon | 57516025 | 57516098 | 57516025 | ID=Msa0301430-mRNA-1:exon:18546;Parent=Msa0301430-mRNA-1 |
| chr2_3 | exon | 57517200 | 57517519 | 57517200 | ID=Msa0301430-mRNA-1:exon:18547;Parent=Msa0301430-mRNA-1 |
| chr2_3 | five_prime_UTR | 57512137 | 57512274 | 57512137 | ID=Msa0301430-mRNA-1:five_prime_utr;Parent=Msa0301430-mRNA-1 |
| chr2_3 | five_prime_UTR | 57513036 | 57513094 | 57513036 | ID=Msa0301430-mRNA-1:five_prime_utr;Parent=Msa0301430-mRNA-1 |
| chr2_3 | CDS | 57513095 | 57513229 | 57513095 | ID=Msa0301430-mRNA-1:cds;Parent=Msa0301430-mRNA-1 |
| chr2_3 | CDS | 57514894 | 57514963 | 57514894 | ID=Msa0301430-mRNA-1:cds;Parent=Msa0301430-mRNA-1 |
| chr2_3 | CDS | 57515747 | 57515913 | 57515747 | ID=Msa0301430-mRNA-1:cds;Parent=Msa0301430-mRNA-1 |
| chr2_3 | CDS | 57516025 | 57516098 | 57516025 | ID=Msa0301430-mRNA-1:cds;Parent=Msa0301430-mRNA-1 |
| chr2_3 | CDS | 57517200 | 57517260 | 57517200 | ID=Msa0301430-mRNA-1:cds;Parent=Msa0301430-mRNA-1 |
| chr2_3 | three_prime_UTR | 57517261 | 57517519 | 57517261 | ID=Msa0301430-mRNA-1:three_prime_utr;Parent=Msa0301430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
