Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302100 | XP_013442988.1 | 97.342 | 301 | 8 | 0 | 1 | 301 | 1 | 301 | 0.0 | 606 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302100 | sp|Q5I0I5|USB1_RAT | 25.391 | 256 | 162 | 3 | 46 | 295 | 32 | 264 | 9.69e-28 | 111 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302100 | A0A072TJH3 | 97.342 | 301 | 8 | 0 | 1 | 301 | 1 | 301 | 0.0 | 606 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0302100 | Msa0302120 | 0.972234 | 1.960936e-134 | -8.615850e-47 |
| Msa0302100 | Msa0339550 | 0.854020 | 1.625448e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302100 | MtrunA17_Chr7g0230691 | 97.342 | 301 | 8 | 0 | 1 | 301 | 1 | 301 | 0.0 | 606 |
| Msa0302100 | MtrunA17_Chr7g0230741 | 96.721 | 183 | 6 | 0 | 1 | 183 | 1 | 183 | 1.42e-127 | 361 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302100 | AT5G51170.1 | 63.964 | 222 | 79 | 1 | 79 | 300 | 64 | 284 | 2.33e-101 | 298 |
| Msa0302100 | AT5G51170.4 | 58.559 | 222 | 63 | 2 | 79 | 300 | 64 | 256 | 2.30e-89 | 267 |
| Msa0302100 | AT5G51170.3 | 64.103 | 195 | 69 | 1 | 106 | 300 | 28 | 221 | 5.61e-87 | 259 |
| Msa0302100 | AT5G51170.2 | 61.702 | 141 | 53 | 1 | 79 | 219 | 64 | 203 | 7.47e-58 | 186 |
Find 68 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGATCTGCCAAAATATTTA+TGG | 0.159427 | 2_3:-58710890 | Msa0302100:three_prime_UTR |
| GGATGCAACCATAAATATTT+TGG | 0.187256 | 2_3:+58710882 | None:intergenic |
| TTCGATACCTTTGAATTTAC+AGG | 0.197746 | 2_3:+58710988 | None:intergenic |
| GAAATCAAGAAATGTGTTTC+TGG | 0.204852 | 2_3:-58711037 | Msa0302100:CDS |
| CCCAGCATACCAAGAAAATT+TGG | 0.234445 | 2_3:+58715424 | None:intergenic |
| AAGGGAGTTTCACATAAGTT+TGG | 0.299639 | 2_3:-58713661 | Msa0302100:CDS |
| AGCTCCTAACTTTAGTTGTC+TGG | 0.332076 | 2_3:+58715036 | None:intergenic |
| TAGGAGGTGGCGGCAAGGGC+TGG | 0.366489 | 2_3:+58715464 | None:intergenic |
| GAGGCATTAATGCAATGTTA+TGG | 0.379241 | 2_3:-58715613 | Msa0302100:CDS |
| ACACTGACCTCGTAAAATTC+AGG | 0.393841 | 2_3:+58711605 | None:intergenic |
| CAGATAGATGATAATGTGAA+TGG | 0.394024 | 2_3:-58710925 | Msa0302100:exon |
| CTCTCAGTCGAGGTTGTTCA+CGG | 0.396930 | 2_3:-58713405 | Msa0302100:CDS |
| GTTTGTTGCCCGGGGTGGCA+AGG | 0.397405 | 2_3:+58715516 | None:intergenic |
| AGGGAGTTTCACATAAGTTT+GGG | 0.402709 | 2_3:-58713660 | Msa0302100:CDS |
| CATTTCGTTAGCATGGTCAT+TGG | 0.406486 | 2_3:-58711098 | Msa0302100:CDS |
| AGGAGCTTCCCTCATGTTGA+TGG | 0.416207 | 2_3:-58715020 | Msa0302100:CDS |
| TAAGCCAGACAACTAAAGTT+AGG | 0.418446 | 2_3:-58715040 | Msa0302100:CDS |
| GGAGGATGAAGGAGCGCAAT+AGG | 0.426335 | 2_3:+58715445 | None:intergenic |
| AGGCATTAATGCAATGTTAT+GGG | 0.426486 | 2_3:-58715612 | Msa0302100:CDS |
| TTCACGAATGTTTGTTGCCC+GGG | 0.435513 | 2_3:+58715507 | None:intergenic |
| AAATCAAGAAATGTGTTTCT+GGG | 0.446858 | 2_3:-58711036 | Msa0302100:CDS |
| TCAATCTGATGTACTCGTAT+TGG | 0.447949 | 2_3:+58713627 | None:intergenic |
| CAGTCTACATAGAATAGAAC+TGG | 0.451596 | 2_3:+58710861 | None:intergenic |
| TGCATAAGCTAAGGTTGGAT+TGG | 0.452098 | 2_3:+58715552 | None:intergenic |
| ATTTCGTTAGCATGGTCATT+GGG | 0.452771 | 2_3:-58711097 | Msa0302100:CDS |
| CTTTCTGCATAAGCTAAGGT+TGG | 0.456737 | 2_3:+58715547 | None:intergenic |
| AAAGGTATCGAATGTAAGAT+TGG | 0.468840 | 2_3:-58710977 | Msa0302100:CDS |
| CAGTCGAGGTTGTTCACGGT+GGG | 0.470787 | 2_3:-58713401 | Msa0302100:CDS |
| ACTTGGTATGTATACATGTA+AGG | 0.484192 | 2_3:+58714989 | None:intergenic |
| ACTGGATCGACTTTGACAAA+TGG | 0.484713 | 2_3:-58713464 | Msa0302100:CDS |
| TTTGTTGCCCGGGGTGGCAA+GGG | 0.491040 | 2_3:+58715517 | None:intergenic |
| GTTCACGAATGTTTGTTGCC+CGG | 0.496813 | 2_3:+58715506 | None:intergenic |
| CGCAATAGGAGGTGGCGGCA+AGG | 0.500205 | 2_3:+58715459 | None:intergenic |
| CTACGAAACTTAGAAAGATC+AGG | 0.502758 | 2_3:+58715652 | None:intergenic |
| CTGGATCGACTTTGACAAAT+GGG | 0.507548 | 2_3:-58713463 | Msa0302100:CDS |
| CAAGAAAATTTGGAGGATGA+AGG | 0.508763 | 2_3:+58715434 | None:intergenic |
| GCAATAGGAGGTGGCGGCAA+GGG | 0.510215 | 2_3:+58715460 | None:intergenic |
| ACATCAACGGCACAAAGACT+TGG | 0.514481 | 2_3:+58713744 | None:intergenic |
| ACGTGAGCCCTTGCCACCCC+GGG | 0.528418 | 2_3:-58715524 | Msa0302100:CDS |
| CGAATGTTTGTTGCCCGGGG+TGG | 0.532635 | 2_3:+58715511 | None:intergenic |
| GACGTGAGCCCTTGCCACCC+CGG | 0.539443 | 2_3:-58715525 | Msa0302100:CDS |
| GTCCTCACATTTCGTTAGCA+TGG | 0.540870 | 2_3:-58711105 | Msa0302100:CDS |
| TAAGCTAAGGTTGGATTGGA+AGG | 0.544475 | 2_3:+58715556 | None:intergenic |
| TGGACGCATGCTTTGTGAAG+TGG | 0.546759 | 2_3:+58715484 | None:intergenic |
| ACGTCTTTCTGCATAAGCTA+AGG | 0.555280 | 2_3:+58715543 | None:intergenic |
| TGAAGGAGCGCAATAGGAGG+TGG | 0.555464 | 2_3:+58715451 | None:intergenic |
| TGTTCACGGTGGGCTTGTAG+AGG | 0.575645 | 2_3:-58713391 | Msa0302100:intron |
| AACAACCTCGACTGAGAGGA+AGG | 0.577707 | 2_3:+58713410 | None:intergenic |
| TTAATGCAATGTTATGGGGA+TGG | 0.578101 | 2_3:-58715607 | Msa0302100:CDS |
| GTGAATGGTTTATAGAGTAA+CGG | 0.580726 | 2_3:-58710910 | Msa0302100:three_prime_UTR |
| TGGCTTATCTGAATATCTTG+AGG | 0.583122 | 2_3:+58715056 | None:intergenic |
| AGGAGCGCAATAGGAGGTGG+CGG | 0.592012 | 2_3:+58715454 | None:intergenic |
| GCTAACGAAATGTGAGGACG+TGG | 0.594436 | 2_3:+58711109 | None:intergenic |
| AGCATACCAAGAAAATTTGG+AGG | 0.602667 | 2_3:+58715427 | None:intergenic |
| GCATAGTTACCATCAACATG+AGG | 0.627181 | 2_3:+58715011 | None:intergenic |
| GGATGAAGGAGCGCAATAGG+AGG | 0.627367 | 2_3:+58715448 | None:intergenic |
| TCAGTCGAGGTTGTTCACGG+TGG | 0.629011 | 2_3:-58713402 | Msa0302100:CDS |
| GGCATTAATGCAATGTTATG+GGG | 0.632606 | 2_3:-58715611 | Msa0302100:CDS |
| CATAGTTACCATCAACATGA+GGG | 0.639206 | 2_3:+58715012 | None:intergenic |
| CGTGAACAACCTCGACTGAG+AGG | 0.646686 | 2_3:+58713406 | None:intergenic |
| ACGCACCTTCCTCTCAGTCG+AGG | 0.647582 | 2_3:-58713415 | Msa0302100:CDS |
| TCACGAATGTTTGTTGCCCG+GGG | 0.650250 | 2_3:+58715508 | None:intergenic |
| AAGTGGGACATCAACATCAA+CGG | 0.651923 | 2_3:+58713731 | None:intergenic |
| GATCGACTTTGACAAATGGG+AGG | 0.652184 | 2_3:-58713460 | Msa0302100:CDS |
| CGATTCCTTGAAGAAAACTG+TGG | 0.667788 | 2_3:-58711065 | Msa0302100:CDS |
| TGACCTCGTAAAATTCAGGA+AGG | 0.669807 | 2_3:+58711609 | None:intergenic |
| GACCATGCTAACGAAATGTG+AGG | 0.681537 | 2_3:+58711103 | None:intergenic |
| AGTACATCAGATTGACTCAG+TGG | 0.704214 | 2_3:-58713619 | Msa0302100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATTGTTTTGAAATGTT+TGG | - | chr2_3:58711937-58711956 | Msa0302100:intron | 15.0% |
| !!! | ATAATTGTTTTGAAATGTTT+GGG | - | chr2_3:58711938-58711957 | Msa0302100:intron | 15.0% |
| !! | AAAACAATAATTGAAAAACT+CGG | - | chr2_3:58712128-58712147 | Msa0302100:intron | 15.0% |
| !! | ATTACATGTAAATCTTAAAA+AGG | + | chr2_3:58712446-58712465 | None:intergenic | 15.0% |
| !! | CAGTTCTATTAAAAAAAAAA+AGG | + | chr2_3:58713355-58713374 | None:intergenic | 15.0% |
| !! | AAAAAAAGCAAAAAAATGTT+CGG | - | chr2_3:58715117-58715136 | Msa0302100:intron | 15.0% |
| !! | TAATTAAAATATGTTCCTTG+TGG | - | chr2_3:58711158-58711177 | Msa0302100:intron | 20.0% |
| !!! | ATTATTTATTTGATTTCCGA+TGG | + | chr2_3:58711368-58711387 | None:intergenic | 20.0% |
| !!! | AATGAACTCTTATTTATATG+TGG | - | chr2_3:58711385-58711404 | Msa0302100:intron | 20.0% |
| !! | TAAGATAATGTTAACTTACT+TGG | + | chr2_3:58711551-58711570 | None:intergenic | 20.0% |
| !! | ACAATTATTAATCAAGTTTG+TGG | + | chr2_3:58711926-58711945 | None:intergenic | 20.0% |
| !!! | TTAAAGCTAATTGATTCAAA+AGG | - | chr2_3:58712494-58712513 | Msa0302100:intron | 20.0% |
| !! | AACAAGAATAAAAACTTACA+GGG | + | chr2_3:58712960-58712979 | None:intergenic | 20.0% |
| !! | AAACAAGAATAAAAACTTAC+AGG | + | chr2_3:58712961-58712980 | None:intergenic | 20.0% |
| !!! | TCTTGTTTTGAAAAATTGAA+CGG | - | chr2_3:58712973-58712992 | Msa0302100:intron | 20.0% |
| !!! | AAATATAGAGGCATAAAAAT+TGG | + | chr2_3:58713178-58713197 | None:intergenic | 20.0% |
| !! | TACTAACACAATAAATATAG+AGG | + | chr2_3:58713190-58713209 | None:intergenic | 20.0% |
| !! | AATCAATCAATCATGAATAT+TGG | + | chr2_3:58713289-58713308 | None:intergenic | 20.0% |
| !! | AAAAGGCAAAATATGAATAT+TGG | + | chr2_3:58713338-58713357 | None:intergenic | 20.0% |
| !! | CTGATATATAATATTGTTGA+TGG | - | chr2_3:58713375-58713394 | Msa0302100:intron | 20.0% |
| !! | GCAATTATGAAATAAATGTT+GGG | + | chr2_3:58714462-58714481 | None:intergenic | 20.0% |
| !! | TGCAATTATGAAATAAATGT+TGG | + | chr2_3:58714463-58714482 | None:intergenic | 20.0% |
| !! | ACAATACTACTTAATCTTAA+AGG | + | chr2_3:58714513-58714532 | None:intergenic | 20.0% |
| !! | TATGATATGATATAAGCTTT+AGG | + | chr2_3:58714546-58714565 | None:intergenic | 20.0% |
| !!! | CATTTTATTTGATGAATCTA+AGG | - | chr2_3:58714577-58714596 | Msa0302100:intron | 20.0% |
| !! | TAAATAAAATGCAAGTTTAG+CGG | + | chr2_3:58714675-58714694 | None:intergenic | 20.0% |
| !!! | TTTTCAATTGATTTCAGATA+AGG | - | chr2_3:58714847-58714866 | Msa0302100:intron | 20.0% |
| !!! | GAATAATTTTTTAGTTGTGA+TGG | + | chr2_3:58715187-58715206 | None:intergenic | 20.0% |
| !! | TAATATATATTTCAACCACT+CGG | - | chr2_3:58715231-58715250 | Msa0302100:intron | 20.0% |
| !! | TACAAAGTAAAAGTTGAAAA+TGG | - | chr2_3:58715255-58715274 | Msa0302100:intron | 20.0% |
| !! | TGATTTTCTTACTCTTTACA+AGG | - | chr2_3:58711127-58711146 | Msa0302100:intron | 25.0% |
| !! | GATTTTCTTACTCTTTACAA+GGG | - | chr2_3:58711128-58711147 | Msa0302100:intron | 25.0% |
| !! | TCATCATTCTGAAAAATATG+AGG | + | chr2_3:58711242-58711261 | None:intergenic | 25.0% |
| !! | TCATCATTCTGAAAAATATG+AGG | + | chr2_3:58711242-58711261 | None:intergenic | 25.0% |
| ! | AATGAACATTCATCATCAAA+AGG | + | chr2_3:58711430-58711449 | None:intergenic | 25.0% |
| ! | AGTTAACATTATCTTAGTGT+TGG | - | chr2_3:58711555-58711574 | Msa0302100:intron | 25.0% |
| !! | TATATTTAAGACAATCGTGA+TGG | + | chr2_3:58711709-58711728 | None:intergenic | 25.0% |
| ! | TTTAATCATCATTTGTAACC+AGG | - | chr2_3:58711811-58711830 | Msa0302100:intron | 25.0% |
| !! | AATCATTTAAAGTAATACCC+TGG | - | chr2_3:58712232-58712251 | Msa0302100:intron | 25.0% |
| ! | TCAAGCATTATAAAGTAACA+TGG | + | chr2_3:58712599-58712618 | None:intergenic | 25.0% |
| !! | TGATATTTTCTTCAAGAAAG+CGG | + | chr2_3:58712747-58712766 | None:intergenic | 25.0% |
| ! | ACAAGAATAAAAACTTACAG+GGG | + | chr2_3:58712959-58712978 | None:intergenic | 25.0% |
| !!! | ATTGTTGATGGTAAAGTAAT+AGG | - | chr2_3:58713387-58713406 | Msa0302100:intron | 25.0% |
| !!! | TTGTTGATGGTAAAGTAATA+GGG | - | chr2_3:58713388-58713407 | Msa0302100:intron | 25.0% |
| ! | CAGTCCTTATTATAAAGTAT+CGG | - | chr2_3:58713830-58713849 | Msa0302100:intron | 25.0% |
| !! | AGTCCTTATTATAAAGTATC+GGG | - | chr2_3:58713831-58713850 | Msa0302100:intron | 25.0% |
| ! | TTACCCGATACTTTATAATA+AGG | + | chr2_3:58713837-58713856 | None:intergenic | 25.0% |
| ! | TATAGTAACAGATTTCATCT+TGG | + | chr2_3:58714027-58714046 | None:intergenic | 25.0% |
| ! | AAATCTGTTACTATATGCTT+TGG | - | chr2_3:58714032-58714051 | Msa0302100:intron | 25.0% |
| ! | ATAGAGATATTCAGAATATG+TGG | - | chr2_3:58714116-58714135 | Msa0302100:intron | 25.0% |
| ! | TTCTATTGCAAATGAAGTTT+CGG | - | chr2_3:58714351-58714370 | Msa0302100:intron | 25.0% |
| ! | TAATATTCTCATCTTTGCTA+TGG | - | chr2_3:58714406-58714425 | Msa0302100:intron | 25.0% |
| ! | ATTCATCAAATAAAATGACG+TGG | + | chr2_3:58714574-58714593 | None:intergenic | 25.0% |
| ! | AAATAAAATGCAAGTTTAGC+GGG | + | chr2_3:58714674-58714693 | None:intergenic | 25.0% |
| ! | TTAGAGATATAAACAAGTCT+TGG | + | chr2_3:58714732-58714751 | None:intergenic | 25.0% |
| ! | AAAGAAACACACATTTAATG+TGG | + | chr2_3:58714830-58714849 | None:intergenic | 25.0% |
| ! | TTGAAAATCAGCAGTTTATT+AGG | - | chr2_3:58714988-58715007 | Msa0302100:intron | 25.0% |
| ! | TGAAAATCAGCAGTTTATTA+GGG | - | chr2_3:58714989-58715008 | Msa0302100:intron | 25.0% |
| ! | TTCACTTAGAGAATACATTA+TGG | - | chr2_3:58715045-58715064 | Msa0302100:CDS | 25.0% |
| !!! | CTTTTGAAACAACACATTAT+TGG | + | chr2_3:58715327-58715346 | None:intergenic | 25.0% |
| ! | AAATCAAGAAATGTGTTTCT+GGG | - | chr2_3:58715484-58715503 | Msa0302100:CDS | 25.0% |
| !! | ATTTTTGCCTGTAAATTCAA+AGG | - | chr2_3:58715525-58715544 | Msa0302100:CDS | 25.0% |
| ! | TTTTCAGTACTATCTGTTTC+TGG | - | chr2_3:58710844-58710863 | Msa0302100:three_prime_UTR | 30.0% |
| AGGCATTAATGCAATGTTAT+GGG | - | chr2_3:58710908-58710927 | Msa0302100:three_prime_UTR | 30.0% | |
| AAAATATGTTCCTTGTGGAT+AGG | - | chr2_3:58711163-58711182 | Msa0302100:intron | 30.0% | |
| AAATTCTAAACCTATCCACA+AGG | + | chr2_3:58711176-58711195 | None:intergenic | 30.0% | |
| ! | TGTGGATAGGTTTAGAATTT+AGG | - | chr2_3:58711176-58711195 | Msa0302100:intron | 30.0% |
| ! | ATGTTTGAAGTTCTTTCCAT+CGG | - | chr2_3:58711349-58711368 | Msa0302100:intron | 30.0% |
| AATGTTCATTGTTGTGATGA+AGG | - | chr2_3:58711440-58711459 | Msa0302100:intron | 30.0% | |
| ATGTTCATTGTTGTGATGAA+GGG | - | chr2_3:58711441-58711460 | Msa0302100:intron | 30.0% | |
| ACTTGGTATGTATACATGTA+AGG | + | chr2_3:58711534-58711553 | None:intergenic | 30.0% | |
| ! | TTTTCTGTTTTGTCATACAG+TGG | - | chr2_3:58711585-58711604 | Msa0302100:intron | 30.0% |
| CTATGCATTGCATATGATTA+TGG | - | chr2_3:58711654-58711673 | Msa0302100:CDS | 30.0% | |
| ! | TTTTCAAAACTTAGTGACCA+AGG | + | chr2_3:58711996-58712015 | None:intergenic | 30.0% |
| !! | AGAAATTTTGATGCAAGACT+TGG | + | chr2_3:58712023-58712042 | None:intergenic | 30.0% |
| ! | GGAATTTAGAGTTAGTTAGT+TGG | - | chr2_3:58712163-58712182 | Msa0302100:intron | 30.0% |
| ! | TTAAATAGTCTTGCAAACAC+TGG | + | chr2_3:58712553-58712572 | None:intergenic | 30.0% |
| ! | ATAAAGTAACATGGAAGTAC+AGG | + | chr2_3:58712590-58712609 | None:intergenic | 30.0% |
| ! | AAGCTTGAACAACTTTTACT+AGG | - | chr2_3:58712836-58712855 | Msa0302100:intron | 30.0% |
| ! | TTGAACAACTTTTACTAGGA+AGG | - | chr2_3:58712840-58712859 | Msa0302100:intron | 30.0% |
| ! | TGAACAACTTTTACTAGGAA+GGG | - | chr2_3:58712841-58712860 | Msa0302100:intron | 30.0% |
| TGCTCAAAATGACAAGTTAA+AGG | + | chr2_3:58713033-58713052 | None:intergenic | 30.0% | |
| !! | TGTTGATGGTAAAGTAATAG+GGG | - | chr2_3:58713389-58713408 | Msa0302100:intron | 30.0% |
| GCATAATTGTAACAGTTGTT+TGG | - | chr2_3:58713479-58713498 | Msa0302100:intron | 30.0% | |
| AGTTCGTCAGTAAGAATAAA+AGG | - | chr2_3:58713502-58713521 | Msa0302100:intron | 30.0% | |
| GTTCGTCAGTAAGAATAAAA+GGG | - | chr2_3:58713503-58713522 | Msa0302100:intron | 30.0% | |
| ATGAAGAATCAAGAACACTT+AGG | + | chr2_3:58713763-58713782 | None:intergenic | 30.0% | |
| ACTTTATAATAAGGACTGGA+CGG | + | chr2_3:58713828-58713847 | None:intergenic | 30.0% | |
| CGATACTTTATAATAAGGAC+TGG | + | chr2_3:58713832-58713851 | None:intergenic | 30.0% | |
| !! | AAGTATCGGGTAATTGAAAT+CGG | - | chr2_3:58713844-58713863 | Msa0302100:intron | 30.0% |
| GGTAATTGAAATCGGATTAT+TGG | - | chr2_3:58713852-58713871 | Msa0302100:intron | 30.0% | |
| TGAAATCGGATTATTGGTAA+TGG | - | chr2_3:58713858-58713877 | Msa0302100:intron | 30.0% | |
| TAATGGAATTGTGAGAAGTT+TGG | - | chr2_3:58713875-58713894 | Msa0302100:intron | 30.0% | |
| TAATTCAGCATTAGTGTTCT+AGG | - | chr2_3:58713953-58713972 | Msa0302100:intron | 30.0% | |
| ATTAACCAAGGTTCAAATGT+TGG | - | chr2_3:58713986-58714005 | Msa0302100:intron | 30.0% | |
| AAAAACCAACATTTGAACCT+TGG | + | chr2_3:58713994-58714013 | None:intergenic | 30.0% | |
| !! | TATATGCTTTGGAATTTCGA+GGG | - | chr2_3:58714043-58714062 | Msa0302100:intron | 30.0% |
| ATAGGATTTAACTCAGGTTA+GGG | + | chr2_3:58714161-58714180 | None:intergenic | 30.0% | |
| TCTATCATAGGATTTAACTC+AGG | + | chr2_3:58714167-58714186 | None:intergenic | 30.0% | |
| ! | GTCTTGTAGATCTATTTCTT+GGG | - | chr2_3:58714248-58714267 | Msa0302100:intron | 30.0% |
| ! | AGATGATAGAATTTTGTGCA+AGG | + | chr2_3:58714330-58714349 | None:intergenic | 30.0% |
| AATAAATGTTGGGCAGTAAA+GGG | + | chr2_3:58714452-58714471 | None:intergenic | 30.0% | |
| AAATAAATGTTGGGCAGTAA+AGG | + | chr2_3:58714453-58714472 | None:intergenic | 30.0% | |
| ! | TTGCATGTTTTATAGTTGTG+TGG | - | chr2_3:58714478-58714497 | Msa0302100:intron | 30.0% |
| !! | GCTGATTTTCAAAAACAGTT+TGG | + | chr2_3:58714980-58714999 | None:intergenic | 30.0% |
| AATAACACCAGAATTATACC+AGG | + | chr2_3:58715015-58715034 | None:intergenic | 30.0% | |
| ! | AATGAGTCTCAACAGTTTTA+TGG | - | chr2_3:58715300-58715319 | Msa0302100:intron | 30.0% |
| ! | AAACTTGAAGTATTCTGTAC+AGG | - | chr2_3:58715386-58715405 | Msa0302100:intron | 30.0% |
| GAAATCAAGAAATGTGTTTC+TGG | - | chr2_3:58715483-58715502 | Msa0302100:CDS | 30.0% | |
| TTCGATACCTTTGAATTTAC+AGG | + | chr2_3:58715535-58715554 | None:intergenic | 30.0% | |
| !! | AAAGGTATCGAATGTAAGAT+TGG | - | chr2_3:58715543-58715562 | Msa0302100:CDS | 30.0% |
| ! | CAGATAGATGATAATGTGAA+TGG | - | chr2_3:58715595-58715614 | Msa0302100:CDS | 30.0% |
| GTGAATGGTTTATAGAGTAA+CGG | - | chr2_3:58715610-58715629 | Msa0302100:CDS | 30.0% | |
| ! | GGATGCAACCATAAATATTT+TGG | + | chr2_3:58715641-58715660 | None:intergenic | 30.0% |
| CTACGAAACTTAGAAAGATC+AGG | + | chr2_3:58710871-58710890 | None:intergenic | 35.0% | |
| ! | GAGGCATTAATGCAATGTTA+TGG | - | chr2_3:58710907-58710926 | Msa0302100:three_prime_UTR | 35.0% |
| GGCATTAATGCAATGTTATG+GGG | - | chr2_3:58710909-58710928 | Msa0302100:three_prime_UTR | 35.0% | |
| TTAATGCAATGTTATGGGGA+TGG | - | chr2_3:58710913-58710932 | Msa0302100:three_prime_UTR | 35.0% | |
| CAAGAAAATTTGGAGGATGA+AGG | + | chr2_3:58711089-58711108 | None:intergenic | 35.0% | |
| ! | CTTCATCCTCCAAATTTTCT+TGG | - | chr2_3:58711087-58711106 | Msa0302100:CDS | 35.0% |
| AGCATACCAAGAAAATTTGG+AGG | + | chr2_3:58711096-58711115 | None:intergenic | 35.0% | |
| ! | TCCAAATTTTCTTGGTATGC+TGG | - | chr2_3:58711095-58711114 | Msa0302100:CDS | 35.0% |
| ! | CCAAATTTTCTTGGTATGCT+GGG | - | chr2_3:58711096-58711115 | Msa0302100:CDS | 35.0% |
| TGGCTTATCTGAATATCTTG+AGG | + | chr2_3:58711467-58711486 | None:intergenic | 35.0% | |
| TAAGCCAGACAACTAAAGTT+AGG | - | chr2_3:58711480-58711499 | Msa0302100:intron | 35.0% | |
| CATAGTTACCATCAACATGA+GGG | + | chr2_3:58711511-58711530 | None:intergenic | 35.0% | |
| ! | GTTTTGTCATACAGTGGTTA+TGG | - | chr2_3:58711591-58711610 | Msa0302100:intron | 35.0% |
| GCATGCATTTAGATTTACCT+GGG | - | chr2_3:58711676-58711695 | Msa0302100:intron | 35.0% | |
| TGTTGCAGAGAAAGAAAGAA+TGG | + | chr2_3:58711785-58711804 | None:intergenic | 35.0% | |
| CATCATTTGTAACCAGGTTA+AGG | - | chr2_3:58711817-58711836 | Msa0302100:intron | 35.0% | |
| ! | AATTTGAGATCACCTTAACC+TGG | + | chr2_3:58711832-58711851 | None:intergenic | 35.0% |
| AGGTTAAGGTGATCTCAAAT+TGG | - | chr2_3:58711831-58711850 | Msa0302100:intron | 35.0% | |
| !!! | TGTTTTGATCCACATTTGTG+AGG | - | chr2_3:58711883-58711902 | Msa0302100:intron | 35.0% |
| GTTAGTTGGTTAGAGTTAGT+TGG | - | chr2_3:58712177-58712196 | Msa0302100:intron | 35.0% | |
| !! | ACCTTTGAAATTTGACTCCA+GGG | + | chr2_3:58712252-58712271 | None:intergenic | 35.0% |
| AGTCAAATTTCAAAGGTGGT+TGG | - | chr2_3:58712255-58712274 | Msa0302100:intron | 35.0% | |
| GTCAAATTTCAAAGGTGGTT+GGG | - | chr2_3:58712256-58712275 | Msa0302100:intron | 35.0% | |
| TCAAATTTCAAAGGTGGTTG+GGG | - | chr2_3:58712257-58712276 | Msa0302100:intron | 35.0% | |
| CTTGAGGAATCAATTGAGAT+AGG | + | chr2_3:58712330-58712349 | None:intergenic | 35.0% | |
| ! | TATGCATTTCTAGATCCTGT+AGG | + | chr2_3:58712394-58712413 | None:intergenic | 35.0% |
| !! | TCAAAAGTGTTCCTGCTTTA+AGG | - | chr2_3:58712647-58712666 | Msa0302100:intron | 35.0% |
| ! | TTTTACAGAGGACGTTAAGT+GGG | + | chr2_3:58712808-58712827 | None:intergenic | 35.0% |
| ! | TTTTTACAGAGGACGTTAAG+TGG | + | chr2_3:58712809-58712828 | None:intergenic | 35.0% |
| AAGGGAGTTTCACATAAGTT+TGG | - | chr2_3:58712859-58712878 | Msa0302100:intron | 35.0% | |
| AGGGAGTTTCACATAAGTTT+GGG | - | chr2_3:58712860-58712879 | Msa0302100:intron | 35.0% | |
| TCAATCTGATGTACTCGTAT+TGG | + | chr2_3:58712896-58712915 | None:intergenic | 35.0% | |
| AAAGGCAACAATCAGGTAAA+CGG | + | chr2_3:58713015-58713034 | None:intergenic | 35.0% | |
| ACAAGTTAAAGGCAACAATC+AGG | + | chr2_3:58713022-58713041 | None:intergenic | 35.0% | |
| GTGTTAGTACATATGCAAGT+TGG | - | chr2_3:58713201-58713220 | Msa0302100:intron | 35.0% | |
| !! | GTTGATGGTAAAGTAATAGG+GGG | - | chr2_3:58713390-58713409 | Msa0302100:intron | 35.0% |
| GTATGGTAGTAGTAATAGGA+AGG | - | chr2_3:58713436-58713455 | Msa0302100:CDS | 35.0% | |
| AGTAGTAATAGGAAGGAAAC+AGG | - | chr2_3:58713443-58713462 | Msa0302100:CDS | 35.0% | |
| GTAGTAATAGGAAGGAAACA+GGG | - | chr2_3:58713444-58713463 | Msa0302100:CDS | 35.0% | |
| TAGTAATAGGAAGGAAACAG+GGG | - | chr2_3:58713445-58713464 | Msa0302100:CDS | 35.0% | |
| GTCAGTAAGAATAAAAGGGT+GGG | - | chr2_3:58713507-58713526 | Msa0302100:intron | 35.0% | |
| TCAGTAAGAATAAAAGGGTG+GGG | - | chr2_3:58713508-58713527 | Msa0302100:intron | 35.0% | |
| TAACGGAATCAGAATCAAAC+AGG | - | chr2_3:58713703-58713722 | Msa0302100:CDS | 35.0% | |
| AAGTTTGGAGAAGTTGTGTT+TGG | - | chr2_3:58713890-58713909 | Msa0302100:intron | 35.0% | |
| GGACAACATTGAATTAACCA+AGG | - | chr2_3:58713974-58713993 | Msa0302100:intron | 35.0% | |
| AGTAACAGATTTCATCTTGG+AGG | + | chr2_3:58714024-58714043 | None:intergenic | 35.0% | |
| !! | CTATATGCTTTGGAATTTCG+AGG | - | chr2_3:58714042-58714061 | Msa0302100:intron | 35.0% |
| ATTCTTTGCAAGTGTCTGTA+AGG | + | chr2_3:58714090-58714109 | None:intergenic | 35.0% | |
| TACAGACACTTGCAAAGAAT+AGG | - | chr2_3:58714090-58714109 | Msa0302100:intron | 35.0% | |
| CATAGGATTTAACTCAGGTT+AGG | + | chr2_3:58714162-58714181 | None:intergenic | 35.0% | |
| TCAGTTCAAAGGTCTATCAT+AGG | + | chr2_3:58714179-58714198 | None:intergenic | 35.0% | |
| GACTATAGAGTTCAGTTCAA+AGG | + | chr2_3:58714190-58714209 | None:intergenic | 35.0% | |
| CTATACCTCTGCTAATAGTT+TGG | - | chr2_3:58714209-58714228 | Msa0302100:intron | 35.0% | |
| ATATGCCAAACTATTAGCAG+AGG | + | chr2_3:58714217-58714236 | None:intergenic | 35.0% | |
| ! | GTTTGGCATATAGTTTTCCT+TGG | - | chr2_3:58714226-58714245 | Msa0302100:intron | 35.0% |
| GAAATAGATCTACAAGACCA+AGG | + | chr2_3:58714246-58714265 | None:intergenic | 35.0% | |
| ! | GGTCTTGTAGATCTATTTCT+TGG | - | chr2_3:58714247-58714266 | Msa0302100:intron | 35.0% |
| GAAACACAAGACTTGTGATA+TGG | - | chr2_3:58714605-58714624 | Msa0302100:intron | 35.0% | |
| ! | TAACCTTCCTGAATTTTACG+AGG | - | chr2_3:58714908-58714927 | Msa0302100:intron | 35.0% |
| ACCTAGAAAGAATGCATTTC+CGG | + | chr2_3:58715148-58715167 | None:intergenic | 35.0% | |
| ! | ACTTTTACTTTGTATCCGAG+TGG | + | chr2_3:58715249-58715268 | None:intergenic | 35.0% |
| ATTTCGTTAGCATGGTCATT+GGG | - | chr2_3:58715423-58715442 | Msa0302100:intron | 35.0% | |
| ! | CACAGTTTTCTTCAAGGAAT+CGG | + | chr2_3:58715457-58715476 | None:intergenic | 35.0% |
| CGGATCTGCCAAAATATTTA+TGG | - | chr2_3:58715630-58715649 | Msa0302100:exon | 35.0% | |
| CAGTCTACATAGAATAGAAC+TGG | + | chr2_3:58715662-58715681 | None:intergenic | 35.0% | |
| TCGTAGTGCAGACTGAAAAA+TGG | - | chr2_3:58710885-58710904 | Msa0302100:three_prime_UTR | 40.0% | |
| TAGTGCAGACTGAAAAATGG+AGG | - | chr2_3:58710888-58710907 | Msa0302100:three_prime_UTR | 40.0% | |
| ! | TAAGCTAAGGTTGGATTGGA+AGG | + | chr2_3:58710967-58710986 | None:intergenic | 40.0% |
| TGCATAAGCTAAGGTTGGAT+TGG | + | chr2_3:58710971-58710990 | None:intergenic | 40.0% | |
| CTTTCTGCATAAGCTAAGGT+TGG | + | chr2_3:58710976-58710995 | None:intergenic | 40.0% | |
| ACGTCTTTCTGCATAAGCTA+AGG | + | chr2_3:58710980-58710999 | None:intergenic | 40.0% | |
| CCCAGCATACCAAGAAAATT+TGG | + | chr2_3:58711099-58711118 | None:intergenic | 40.0% | |
| AGCTCCTAACTTTAGTTGTC+TGG | + | chr2_3:58711487-58711506 | None:intergenic | 40.0% | |
| GCATAGTTACCATCAACATG+AGG | + | chr2_3:58711512-58711531 | None:intergenic | 40.0% | |
| GGCATGCATTTAGATTTACC+TGG | - | chr2_3:58711675-58711694 | Msa0302100:intron | 40.0% | |
| ATCGTGATGGTTAATTTCCC+AGG | + | chr2_3:58711696-58711715 | None:intergenic | 40.0% | |
| ! | AATTGGCCTACATTCCTGTT+TGG | - | chr2_3:58711848-58711867 | Msa0302100:intron | 40.0% |
| AACAGTCCAAACAGGAATGT+AGG | + | chr2_3:58711857-58711876 | None:intergenic | 40.0% | |
| CATGCAATAACAGTCCAAAC+AGG | + | chr2_3:58711865-58711884 | None:intergenic | 40.0% | |
| TCCACATTTGTGAGGCAAAT+AGG | - | chr2_3:58711891-58711910 | Msa0302100:intron | 40.0% | |
| ACCTATTTGCCTCACAAATG+TGG | + | chr2_3:58711895-58711914 | None:intergenic | 40.0% | |
| !! | TTACTTTTGCCTTGAGACCT+TGG | - | chr2_3:58711976-58711995 | Msa0302100:intron | 40.0% |
| AAAACTCGGACTGTTAGTTG+AGG | - | chr2_3:58712142-58712161 | Msa0302100:intron | 40.0% | |
| ACCCTGGAGTCAAATTTCAA+AGG | - | chr2_3:58712248-58712267 | Msa0302100:intron | 40.0% | |
| !! | CACCTTTGAAATTTGACTCC+AGG | + | chr2_3:58712253-58712272 | None:intergenic | 40.0% |
| CTGGAGTCAAATTTCAAAGG+TGG | - | chr2_3:58712251-58712270 | Msa0302100:intron | 40.0% | |
| AAGTGGGACATCAACATCAA+CGG | + | chr2_3:58712792-58712811 | None:intergenic | 40.0% | |
| !!! | GCTTCTCGTCATTTTTACAG+AGG | + | chr2_3:58712820-58712839 | None:intergenic | 40.0% |
| ! | AGTACATCAGATTGACTCAG+TGG | - | chr2_3:58712901-58712920 | Msa0302100:intron | 40.0% |
| AAGGCAACAATCAGGTAAAC+GGG | + | chr2_3:58713014-58713033 | None:intergenic | 40.0% | |
| !!! | TTGTCATTTTGAGCAGCTAC+TGG | - | chr2_3:58713038-58713057 | Msa0302100:intron | 40.0% |
| ! | ACTGGATCGACTTTGACAAA+TGG | - | chr2_3:58713056-58713075 | Msa0302100:intron | 40.0% |
| ! | CTGGATCGACTTTGACAAAT+GGG | - | chr2_3:58713057-58713076 | Msa0302100:intron | 40.0% |
| GAGCGTATGGTAGTAGTAAT+AGG | - | chr2_3:58713432-58713451 | Msa0302100:CDS | 40.0% | |
| CGTCAGTAAGAATAAAAGGG+TGG | - | chr2_3:58713506-58713525 | Msa0302100:intron | 40.0% | |
| TAAGAATAAAAGGGTGGGGA+GGG | - | chr2_3:58713512-58713531 | Msa0302100:intron | 40.0% | |
| TTGTGTTTGGAAGCTGAACA+TGG | - | chr2_3:58713903-58713922 | Msa0302100:intron | 40.0% | |
| TAACTCAGGTTAGGGAATCA+TGG | + | chr2_3:58714153-58714172 | None:intergenic | 40.0% | |
| TGACCTCGTAAAATTCAGGA+AGG | + | chr2_3:58714914-58714933 | None:intergenic | 40.0% | |
| ACACTGACCTCGTAAAATTC+AGG | + | chr2_3:58714918-58714937 | None:intergenic | 40.0% | |
| AGTGTTTGTAAACCACGACT+TGG | - | chr2_3:58714933-58714952 | Msa0302100:intron | 40.0% | |
| GTGTTTGTAAACCACGACTT+GGG | - | chr2_3:58714934-58714953 | Msa0302100:intron | 40.0% | |
| ATTAGGGCCTGGTATAATTC+TGG | - | chr2_3:58715005-58715024 | Msa0302100:CDS | 40.0% | |
| AAAAAAATGTTCGGCGCTTC+CGG | - | chr2_3:58715126-58715145 | Msa0302100:intron | 40.0% | |
| TCCGGAAATGCATTCTTTCT+AGG | - | chr2_3:58715144-58715163 | Msa0302100:intron | 40.0% | |
| CATTTCGTTAGCATGGTCAT+TGG | - | chr2_3:58715422-58715441 | Msa0302100:intron | 40.0% | |
| CGATTCCTTGAAGAAAACTG+TGG | - | chr2_3:58715455-58715474 | Msa0302100:CDS | 40.0% | |
| ! | GTCATCCACAGTTTTCTTCA+AGG | + | chr2_3:58715463-58715482 | None:intergenic | 40.0% |
| ! | TTCACGAATGTTTGTTGCCC+GGG | + | chr2_3:58711016-58711035 | None:intergenic | 45.0% |
| ! | GTTCACGAATGTTTGTTGCC+CGG | + | chr2_3:58711017-58711036 | None:intergenic | 45.0% |
| ACTTAGTGACCAAGGTCTCA+AGG | + | chr2_3:58711988-58712007 | None:intergenic | 45.0% | |
| CTGACCATCTCTAACAGTCT+CGG | + | chr2_3:58712205-58712224 | None:intergenic | 45.0% | |
| ! | TTTTATCCCGTCGAACGCTT+AGG | - | chr2_3:58712517-58712536 | Msa0302100:intron | 45.0% |
| AACATGACCTAAGCGTTCGA+CGG | + | chr2_3:58712527-58712546 | None:intergenic | 45.0% | |
| AAGTCACTGCACCTTAAAGC+AGG | + | chr2_3:58712661-58712680 | None:intergenic | 45.0% | |
| !! | GCTTTAAGGTGCAGTGACTT+TGG | - | chr2_3:58712661-58712680 | Msa0302100:intron | 45.0% |
| ACATCAACGGCACAAAGACT+TGG | + | chr2_3:58712779-58712798 | None:intergenic | 45.0% | |
| ! | GATCGACTTTGACAAATGGG+AGG | - | chr2_3:58713060-58713079 | Msa0302100:intron | 45.0% |
| GTAAGAATAAAAGGGTGGGG+AGG | - | chr2_3:58713511-58713530 | Msa0302100:intron | 45.0% | |
| AAGAATAAAAGGGTGGGGAG+GGG | - | chr2_3:58713513-58713532 | Msa0302100:intron | 45.0% | |
| AATAAGGACTGGACGGTAAG+AGG | + | chr2_3:58713821-58713840 | None:intergenic | 45.0% | |
| CGACAAAGGGTTAGACATGA+CGG | + | chr2_3:58714281-58714300 | None:intergenic | 45.0% | |
| CATGCAGAAGACTCGACAAA+GGG | + | chr2_3:58714294-58714313 | None:intergenic | 45.0% | |
| ACATGCAGAAGACTCGACAA+AGG | + | chr2_3:58714295-58714314 | None:intergenic | 45.0% | |
| !! | GGGCTTTGAAGAACACTGAA+TGG | - | chr2_3:58714954-58714973 | Msa0302100:intron | 45.0% |
| ATCAGCAGTTTATTAGGGCC+TGG | - | chr2_3:58714994-58715013 | Msa0302100:CDS | 45.0% | |
| GTCCTCACATTTCGTTAGCA+TGG | - | chr2_3:58715415-58715434 | Msa0302100:intron | 45.0% | |
| GACCATGCTAACGAAATGTG+AGG | + | chr2_3:58715420-58715439 | None:intergenic | 45.0% | |
| !!! | TTTATTTTTTAAAAACTTAA+CGG | - | chr2_3:58713686-58713705 | Msa0302100:CDS | 5.0% |
| ! | TCACGAATGTTTGTTGCCCG+GGG | + | chr2_3:58711015-58711034 | None:intergenic | 50.0% |
| TGGACGCATGCTTTGTGAAG+TGG | + | chr2_3:58711039-58711058 | None:intergenic | 50.0% | |
| AGGAGCTTCCCTCATGTTGA+TGG | - | chr2_3:58711500-58711519 | Msa0302100:intron | 50.0% | |
| GGAACCGAGACTGTTAGAGA+TGG | - | chr2_3:58712198-58712217 | Msa0302100:intron | 50.0% | |
| CCATTGAGCCCAGGAAAACT+CGG | - | chr2_3:58712352-58712371 | Msa0302100:intron | 50.0% | |
| ACATGACCTAAGCGTTCGAC+GGG | + | chr2_3:58712526-58712545 | None:intergenic | 50.0% | |
| AACAACCTCGACTGAGAGGA+AGG | + | chr2_3:58713113-58713132 | None:intergenic | 50.0% | |
| CTCTCAGTCGAGGTTGTTCA+CGG | - | chr2_3:58713115-58713134 | Msa0302100:intron | 50.0% | |
| TGCTTAATGTGTGTCGCGAG+TGG | - | chr2_3:58713262-58713281 | Msa0302100:intron | 50.0% | |
| TGCTTAATGTGTGTCGCGAG+TGG | - | chr2_3:58713262-58713281 | Msa0302100:intron | 50.0% | |
| ! | CTTCCTAGTAGGAGAGCGTA+TGG | - | chr2_3:58713419-58713438 | Msa0302100:CDS | 50.0% |
| CTACCATACGCTCTCCTACT+AGG | + | chr2_3:58713425-58713444 | None:intergenic | 50.0% | |
| CAAAGGGTTAGACATGACGG+AGG | + | chr2_3:58714278-58714297 | None:intergenic | 50.0% | |
| GTTCTTCAAAGCCCAAGTCG+TGG | + | chr2_3:58714948-58714967 | None:intergenic | 50.0% | |
| GCTAACGAAATGTGAGGACG+TGG | + | chr2_3:58715414-58715433 | None:intergenic | 50.0% | |
| ! | TGAAGGAGCGCAATAGGAGG+TGG | + | chr2_3:58711072-58711091 | None:intergenic | 55.0% |
| ! | GGATGAAGGAGCGCAATAGG+AGG | + | chr2_3:58711075-58711094 | None:intergenic | 55.0% |
| ! | GGAGGATGAAGGAGCGCAAT+AGG | + | chr2_3:58711078-58711097 | None:intergenic | 55.0% |
| ! | CCGAGTTTTCCTGGGCTCAA+TGG | + | chr2_3:58712355-58712374 | None:intergenic | 55.0% |
| TGAGCCCAGGAAAACTCGGT+CGG | - | chr2_3:58712356-58712375 | Msa0302100:intron | 55.0% | |
| ! | CCATCCGACCGAGTTTTCCT+GGG | + | chr2_3:58712363-58712382 | None:intergenic | 55.0% |
| ! | ACCATCCGACCGAGTTTTCC+TGG | + | chr2_3:58712364-58712383 | None:intergenic | 55.0% |
| CGGATGGTCTGATCACCTAC+AGG | - | chr2_3:58712376-58712395 | Msa0302100:intron | 55.0% | |
| CGTGAACAACCTCGACTGAG+AGG | + | chr2_3:58713117-58713136 | None:intergenic | 55.0% | |
| TCAGTCGAGGTTGTTCACGG+TGG | - | chr2_3:58713118-58713137 | Msa0302100:intron | 55.0% | |
| CAGTCGAGGTTGTTCACGGT+GGG | - | chr2_3:58713119-58713138 | Msa0302100:intron | 55.0% | |
| ! | TGTTCACGGTGGGCTTGTAG+AGG | - | chr2_3:58713129-58713148 | Msa0302100:intron | 55.0% |
| GGTGGGGAGGGGAATTGAAA+AGG | - | chr2_3:58713524-58713543 | Msa0302100:intron | 55.0% | |
| TTTGTTGCCCGGGGTGGCAA+GGG | + | chr2_3:58711006-58711025 | None:intergenic | 60.0% | |
| ! | CGAATGTTTGTTGCCCGGGG+TGG | + | chr2_3:58711012-58711031 | None:intergenic | 60.0% |
| ! | GCAATAGGAGGTGGCGGCAA+GGG | + | chr2_3:58711063-58711082 | None:intergenic | 60.0% |
| ! | AGGAGCGCAATAGGAGGTGG+CGG | + | chr2_3:58711069-58711088 | None:intergenic | 60.0% |
| CCTGGGCTCAATGGAGCTTG+AGG | + | chr2_3:58712346-58712365 | None:intergenic | 60.0% | |
| CCTCAAGCTCCATTGAGCCC+AGG | - | chr2_3:58712343-58712362 | Msa0302100:intron | 60.0% | |
| CCCAGGAAAACTCGGTCGGA+TGG | - | chr2_3:58712360-58712379 | Msa0302100:intron | 60.0% | |
| ACGCACCTTCCTCTCAGTCG+AGG | - | chr2_3:58713105-58713124 | Msa0302100:intron | 60.0% | |
| GGGGGCTGAGACTTCCTAGT+AGG | - | chr2_3:58713408-58713427 | Msa0302100:CDS | 60.0% | |
| ! | GTTTGTTGCCCGGGGTGGCA+AGG | + | chr2_3:58711007-58711026 | None:intergenic | 65.0% |
| ! | CGCAATAGGAGGTGGCGGCA+AGG | + | chr2_3:58711064-58711083 | None:intergenic | 65.0% |
| GACGTGAGCCCTTGCCACCC+CGG | - | chr2_3:58710995-58711014 | Msa0302100:CDS | 70.0% | |
| ACGTGAGCCCTTGCCACCCC+GGG | - | chr2_3:58710996-58711015 | Msa0302100:CDS | 70.0% | |
| ! | TAGGAGGTGGCGGCAAGGGC+TGG | + | chr2_3:58711059-58711078 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 58710823 | 58715719 | 58710823 | ID=Msa0302100;Name=Msa0302100 |
| chr2_3 | mRNA | 58710823 | 58715719 | 58710823 | ID=Msa0302100-mRNA-1;Parent=Msa0302100;Name=Msa0302100-mRNA-1;_AED=0.12;_eAED=0.12;_QI=81|1|1|1|1|1|6|114|301 |
| chr2_3 | exon | 58710823 | 58711134 | 58710823 | ID=Msa0302100-mRNA-1:exon:18984;Parent=Msa0302100-mRNA-1 |
| chr2_3 | exon | 58711613 | 58711678 | 58711613 | ID=Msa0302100-mRNA-1:exon:18983;Parent=Msa0302100-mRNA-1 |
| chr2_3 | exon | 58713392 | 58713488 | 58713392 | ID=Msa0302100-mRNA-1:exon:18982;Parent=Msa0302100-mRNA-1 |
| chr2_3 | exon | 58713582 | 58713831 | 58713582 | ID=Msa0302100-mRNA-1:exon:18981;Parent=Msa0302100-mRNA-1 |
| chr2_3 | exon | 58714991 | 58715080 | 58714991 | ID=Msa0302100-mRNA-1:exon:18980;Parent=Msa0302100-mRNA-1 |
| chr2_3 | exon | 58715434 | 58715719 | 58715434 | ID=Msa0302100-mRNA-1:exon:18979;Parent=Msa0302100-mRNA-1 |
| chr2_3 | five_prime_UTR | 58715639 | 58715719 | 58715639 | ID=Msa0302100-mRNA-1:five_prime_utr;Parent=Msa0302100-mRNA-1 |
| chr2_3 | CDS | 58715434 | 58715638 | 58715434 | ID=Msa0302100-mRNA-1:cds;Parent=Msa0302100-mRNA-1 |
| chr2_3 | CDS | 58714991 | 58715080 | 58714991 | ID=Msa0302100-mRNA-1:cds;Parent=Msa0302100-mRNA-1 |
| chr2_3 | CDS | 58713582 | 58713831 | 58713582 | ID=Msa0302100-mRNA-1:cds;Parent=Msa0302100-mRNA-1 |
| chr2_3 | CDS | 58713392 | 58713488 | 58713392 | ID=Msa0302100-mRNA-1:cds;Parent=Msa0302100-mRNA-1 |
| chr2_3 | CDS | 58711613 | 58711678 | 58711613 | ID=Msa0302100-mRNA-1:cds;Parent=Msa0302100-mRNA-1 |
| chr2_3 | CDS | 58710937 | 58711134 | 58710937 | ID=Msa0302100-mRNA-1:cds;Parent=Msa0302100-mRNA-1 |
| chr2_3 | three_prime_UTR | 58710823 | 58710936 | 58710823 | ID=Msa0302100-mRNA-1:three_prime_utr;Parent=Msa0302100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
