Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302120 | XP_013442988.1 | 97.342 | 301 | 8 | 0 | 1 | 301 | 1 | 301 | 0.0 | 606 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302120 | sp|Q5I0I5|USB1_RAT | 25.391 | 256 | 162 | 3 | 46 | 295 | 32 | 264 | 9.69e-28 | 111 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302120 | A0A072TJH3 | 97.342 | 301 | 8 | 0 | 1 | 301 | 1 | 301 | 0.0 | 606 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0302100 | Msa0302120 | 0.972234 | 1.960936e-134 | -8.615850e-47 |
| Msa0302120 | Msa0339550 | 0.846704 | 1.837576e-59 | -8.615850e-47 |
| Msa0302120 | Msa0750330 | 0.801780 | 7.659868e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302120 | MtrunA17_Chr7g0230691 | 97.342 | 301 | 8 | 0 | 1 | 301 | 1 | 301 | 0.0 | 606 |
| Msa0302120 | MtrunA17_Chr7g0230741 | 96.721 | 183 | 6 | 0 | 1 | 183 | 1 | 183 | 1.42e-127 | 361 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302120 | AT5G51170.1 | 63.964 | 222 | 79 | 1 | 79 | 300 | 64 | 284 | 2.33e-101 | 298 |
| Msa0302120 | AT5G51170.4 | 58.559 | 222 | 63 | 2 | 79 | 300 | 64 | 256 | 2.30e-89 | 267 |
| Msa0302120 | AT5G51170.3 | 64.103 | 195 | 69 | 1 | 106 | 300 | 28 | 221 | 5.61e-87 | 259 |
| Msa0302120 | AT5G51170.2 | 61.702 | 141 | 53 | 1 | 79 | 219 | 64 | 203 | 7.47e-58 | 186 |
Find 68 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGATCTGCCAAAATATTTA+TGG | 0.159427 | 2_3:+58793218 | Msa0302120:three_prime_UTR |
| GGATGCAACCATAAATATTT+TGG | 0.187256 | 2_3:-58793226 | None:intergenic |
| TTCGATACCTTTGAATTTAC+AGG | 0.197746 | 2_3:-58793120 | None:intergenic |
| GAAATCAAGAAATGTGTTTC+TGG | 0.204852 | 2_3:+58793071 | Msa0302120:CDS |
| CCCAGCATACCAAGAAAATT+TGG | 0.234445 | 2_3:-58788687 | None:intergenic |
| AAGGGAGTTTCACATAAGTT+TGG | 0.299639 | 2_3:+58790450 | Msa0302120:CDS |
| AGCTCCTAACTTTAGTTGTC+TGG | 0.332076 | 2_3:-58789075 | None:intergenic |
| TAGGAGGTGGCGGCAAGGGC+TGG | 0.366489 | 2_3:-58788647 | None:intergenic |
| GAGGCATTAATGCAATGTTA+TGG | 0.379241 | 2_3:+58788498 | Msa0302120:CDS |
| ACACTGACCTCGTAAAATTC+AGG | 0.393841 | 2_3:-58792504 | None:intergenic |
| CAGATAGATGATAATGTGAA+TGG | 0.394024 | 2_3:+58793183 | Msa0302120:exon |
| CTCTCAGTCGAGGTTGTTCA+CGG | 0.396930 | 2_3:+58790706 | Msa0302120:CDS |
| GTTTGTTGCCCGGGGTGGCA+AGG | 0.397405 | 2_3:-58788595 | None:intergenic |
| AGGGAGTTTCACATAAGTTT+GGG | 0.402709 | 2_3:+58790451 | Msa0302120:CDS |
| CATTTCGTTAGCATGGTCAT+TGG | 0.406486 | 2_3:+58793010 | Msa0302120:CDS |
| AGGAGCTTCCCTCATGTTGA+TGG | 0.416207 | 2_3:+58789091 | Msa0302120:CDS |
| TAAGCCAGACAACTAAAGTT+AGG | 0.418446 | 2_3:+58789071 | Msa0302120:CDS |
| GGAGGATGAAGGAGCGCAAT+AGG | 0.426335 | 2_3:-58788666 | None:intergenic |
| AGGCATTAATGCAATGTTAT+GGG | 0.426486 | 2_3:+58788499 | Msa0302120:CDS |
| TTCACGAATGTTTGTTGCCC+GGG | 0.435513 | 2_3:-58788604 | None:intergenic |
| AAATCAAGAAATGTGTTTCT+GGG | 0.446858 | 2_3:+58793072 | Msa0302120:CDS |
| TCAATCTGATGTACTCGTAT+TGG | 0.447949 | 2_3:-58790484 | None:intergenic |
| CAGTCTACATAGAATAGAAC+TGG | 0.451596 | 2_3:-58793247 | None:intergenic |
| TGCATAAGCTAAGGTTGGAT+TGG | 0.452098 | 2_3:-58788559 | None:intergenic |
| ATTTCGTTAGCATGGTCATT+GGG | 0.452771 | 2_3:+58793011 | Msa0302120:CDS |
| CTTTCTGCATAAGCTAAGGT+TGG | 0.456737 | 2_3:-58788564 | None:intergenic |
| AAAGGTATCGAATGTAAGAT+TGG | 0.468840 | 2_3:+58793131 | Msa0302120:CDS |
| CAGTCGAGGTTGTTCACGGT+GGG | 0.470787 | 2_3:+58790710 | Msa0302120:CDS |
| ACTTGGTATGTATACATGTA+AGG | 0.484192 | 2_3:-58789122 | None:intergenic |
| ACTGGATCGACTTTGACAAA+TGG | 0.484713 | 2_3:+58790647 | Msa0302120:CDS |
| TTTGTTGCCCGGGGTGGCAA+GGG | 0.491040 | 2_3:-58788594 | None:intergenic |
| GTTCACGAATGTTTGTTGCC+CGG | 0.496813 | 2_3:-58788605 | None:intergenic |
| CGCAATAGGAGGTGGCGGCA+AGG | 0.500205 | 2_3:-58788652 | None:intergenic |
| CTACGAAACTTAGAAAGATC+AGG | 0.502758 | 2_3:-58788459 | None:intergenic |
| CTGGATCGACTTTGACAAAT+GGG | 0.507548 | 2_3:+58790648 | Msa0302120:CDS |
| CAAGAAAATTTGGAGGATGA+AGG | 0.508763 | 2_3:-58788677 | None:intergenic |
| GCAATAGGAGGTGGCGGCAA+GGG | 0.510215 | 2_3:-58788651 | None:intergenic |
| ACATCAACGGCACAAAGACT+TGG | 0.514481 | 2_3:-58790367 | None:intergenic |
| ACGTGAGCCCTTGCCACCCC+GGG | 0.528418 | 2_3:+58788587 | Msa0302120:CDS |
| CGAATGTTTGTTGCCCGGGG+TGG | 0.532635 | 2_3:-58788600 | None:intergenic |
| GACGTGAGCCCTTGCCACCC+CGG | 0.539443 | 2_3:+58788586 | Msa0302120:CDS |
| GTCCTCACATTTCGTTAGCA+TGG | 0.540870 | 2_3:+58793003 | Msa0302120:CDS |
| TAAGCTAAGGTTGGATTGGA+AGG | 0.544475 | 2_3:-58788555 | None:intergenic |
| TGGACGCATGCTTTGTGAAG+TGG | 0.546759 | 2_3:-58788627 | None:intergenic |
| ACGTCTTTCTGCATAAGCTA+AGG | 0.555280 | 2_3:-58788568 | None:intergenic |
| TGAAGGAGCGCAATAGGAGG+TGG | 0.555464 | 2_3:-58788660 | None:intergenic |
| TGTTCACGGTGGGCTTGTAG+AGG | 0.575645 | 2_3:+58790720 | Msa0302120:CDS |
| AACAACCTCGACTGAGAGGA+AGG | 0.577707 | 2_3:-58790701 | None:intergenic |
| TTAATGCAATGTTATGGGGA+TGG | 0.578101 | 2_3:+58788504 | Msa0302120:CDS |
| GTGAATGGTTTATAGAGTAA+CGG | 0.580726 | 2_3:+58793198 | Msa0302120:three_prime_UTR |
| TGGCTTATCTGAATATCTTG+AGG | 0.583122 | 2_3:-58789055 | None:intergenic |
| AGGAGCGCAATAGGAGGTGG+CGG | 0.592012 | 2_3:-58788657 | None:intergenic |
| GCTAACGAAATGTGAGGACG+TGG | 0.594436 | 2_3:-58792999 | None:intergenic |
| AGCATACCAAGAAAATTTGG+AGG | 0.602667 | 2_3:-58788684 | None:intergenic |
| GCATAGTTACCATCAACATG+AGG | 0.627181 | 2_3:-58789100 | None:intergenic |
| GGATGAAGGAGCGCAATAGG+AGG | 0.627367 | 2_3:-58788663 | None:intergenic |
| TCAGTCGAGGTTGTTCACGG+TGG | 0.629011 | 2_3:+58790709 | Msa0302120:CDS |
| GGCATTAATGCAATGTTATG+GGG | 0.632606 | 2_3:+58788500 | Msa0302120:CDS |
| CATAGTTACCATCAACATGA+GGG | 0.639206 | 2_3:-58789099 | None:intergenic |
| CGTGAACAACCTCGACTGAG+AGG | 0.646686 | 2_3:-58790705 | None:intergenic |
| ACGCACCTTCCTCTCAGTCG+AGG | 0.647582 | 2_3:+58790696 | Msa0302120:CDS |
| TCACGAATGTTTGTTGCCCG+GGG | 0.650250 | 2_3:-58788603 | None:intergenic |
| AAGTGGGACATCAACATCAA+CGG | 0.651923 | 2_3:-58790380 | None:intergenic |
| GATCGACTTTGACAAATGGG+AGG | 0.652184 | 2_3:+58790651 | Msa0302120:CDS |
| CGATTCCTTGAAGAAAACTG+TGG | 0.667788 | 2_3:+58793043 | Msa0302120:CDS |
| TGACCTCGTAAAATTCAGGA+AGG | 0.669807 | 2_3:-58792500 | None:intergenic |
| GACCATGCTAACGAAATGTG+AGG | 0.681537 | 2_3:-58793005 | None:intergenic |
| AGTACATCAGATTGACTCAG+TGG | 0.704214 | 2_3:+58790492 | Msa0302120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATTGTTTTGAAATGTT+TGG | + | chr2_3:58789528-58789547 | Msa0302120:intron | 15.0% |
| !!! | ATAATTGTTTTGAAATGTTT+GGG | + | chr2_3:58789529-58789548 | Msa0302120:intron | 15.0% |
| !! | AAAACAATAATTGAAAAACT+CGG | + | chr2_3:58789719-58789738 | Msa0302120:intron | 15.0% |
| !! | ATTACATGTAAATCTTAAAA+AGG | - | chr2_3:58790037-58790056 | None:intergenic | 15.0% |
| !! | AAAAAAAGCAAAAAAATGTT+CGG | + | chr2_3:58792705-58792724 | Msa0302120:intron | 15.0% |
| !! | TAATTAAAATATGTTCCTTG+TGG | + | chr2_3:58788749-58788768 | Msa0302120:intron | 20.0% |
| !!! | ATTATTTATTTGATTTCCGA+TGG | - | chr2_3:58788959-58788978 | None:intergenic | 20.0% |
| !!! | AATGAACTCTTATTTATATG+TGG | + | chr2_3:58788976-58788995 | Msa0302120:intron | 20.0% |
| !! | TAAGATAATGTTAACTTACT+TGG | - | chr2_3:58789142-58789161 | None:intergenic | 20.0% |
| !! | ACAATTATTAATCAAGTTTG+TGG | - | chr2_3:58789517-58789536 | None:intergenic | 20.0% |
| !!! | TTAAAGCTAATTGATTCAAA+AGG | + | chr2_3:58790085-58790104 | Msa0302120:intron | 20.0% |
| !! | AACAAGAATAAAAACTTACA+GGG | - | chr2_3:58790551-58790570 | None:intergenic | 20.0% |
| !! | AAACAAGAATAAAAACTTAC+AGG | - | chr2_3:58790552-58790571 | None:intergenic | 20.0% |
| !!! | TCTTGTTTTGAAAAATTGAA+CGG | + | chr2_3:58790564-58790583 | Msa0302120:intron | 20.0% |
| !!! | AAATATAGAGGCATAAAAAT+TGG | - | chr2_3:58790769-58790788 | None:intergenic | 20.0% |
| !! | TACTAACACAATAAATATAG+AGG | - | chr2_3:58790781-58790800 | None:intergenic | 20.0% |
| !! | AATCAATCAATCATGAATAT+TGG | - | chr2_3:58790880-58790899 | None:intergenic | 20.0% |
| !! | AAAAGGCAAAATATGAATAT+TGG | - | chr2_3:58790929-58790948 | None:intergenic | 20.0% |
| !! | AGCAGTTCTATTAAAAAAAA+AGG | - | chr2_3:58790946-58790965 | None:intergenic | 20.0% |
| !! | CTGATATATAATATTGTTGA+TGG | + | chr2_3:58790964-58790983 | Msa0302120:intron | 20.0% |
| !! | GCAATTATGAAATAAATGTT+GGG | - | chr2_3:58792051-58792070 | None:intergenic | 20.0% |
| !! | TGCAATTATGAAATAAATGT+TGG | - | chr2_3:58792052-58792071 | None:intergenic | 20.0% |
| !! | ACAATACTACTTAATCTTAA+AGG | - | chr2_3:58792102-58792121 | None:intergenic | 20.0% |
| !! | TATGATATGATATAAGCTTT+AGG | - | chr2_3:58792135-58792154 | None:intergenic | 20.0% |
| !!! | CATTTTATTTGATGAATCTA+AGG | + | chr2_3:58792166-58792185 | Msa0302120:intron | 20.0% |
| !! | TAAATAAAATGCAAGTTTAG+CGG | - | chr2_3:58792264-58792283 | None:intergenic | 20.0% |
| !!! | TTTTCAATTGATTTCAGATA+AGG | + | chr2_3:58792436-58792455 | Msa0302120:intron | 20.0% |
| !!! | GAATAATTTTTTAGTTGTGA+TGG | - | chr2_3:58792775-58792794 | None:intergenic | 20.0% |
| !! | TAATATATATTTCAACCACT+CGG | + | chr2_3:58792819-58792838 | Msa0302120:intron | 20.0% |
| !! | TACAAAGTAAAAGTTGAAAA+TGG | + | chr2_3:58792843-58792862 | Msa0302120:intron | 20.0% |
| !! | TGATTTTCTTACTCTTTACA+AGG | + | chr2_3:58788718-58788737 | Msa0302120:intron | 25.0% |
| !! | GATTTTCTTACTCTTTACAA+GGG | + | chr2_3:58788719-58788738 | Msa0302120:intron | 25.0% |
| !! | TCATCATTCTGAAAAATATG+AGG | - | chr2_3:58788833-58788852 | None:intergenic | 25.0% |
| !! | TCATCATTCTGAAAAATATG+AGG | - | chr2_3:58788833-58788852 | None:intergenic | 25.0% |
| ! | AATGAACATTCATCATCAAA+AGG | - | chr2_3:58789021-58789040 | None:intergenic | 25.0% |
| ! | AGTTAACATTATCTTAGTGT+TGG | + | chr2_3:58789146-58789165 | Msa0302120:intron | 25.0% |
| !! | TATATTTAAGACAATCGTGA+TGG | - | chr2_3:58789300-58789319 | None:intergenic | 25.0% |
| ! | TTTAATCATCATTTGTAACC+AGG | + | chr2_3:58789402-58789421 | Msa0302120:intron | 25.0% |
| !! | AATCATTTAAAGTAATACCC+TGG | + | chr2_3:58789823-58789842 | Msa0302120:intron | 25.0% |
| ! | TCAAGCATTATAAAGTAACA+TGG | - | chr2_3:58790190-58790209 | None:intergenic | 25.0% |
| !! | TGATATTTTCTTCAAGAAAG+CGG | - | chr2_3:58790338-58790357 | None:intergenic | 25.0% |
| ! | ACAAGAATAAAAACTTACAG+GGG | - | chr2_3:58790550-58790569 | None:intergenic | 25.0% |
| !!! | ATTGTTGATGGTAAAGTAAT+AGG | + | chr2_3:58790976-58790995 | Msa0302120:intron | 25.0% |
| !!! | TTGTTGATGGTAAAGTAATA+GGG | + | chr2_3:58790977-58790996 | Msa0302120:intron | 25.0% |
| ! | CAGTCCTTATTATAAAGTAT+CGG | + | chr2_3:58791419-58791438 | Msa0302120:intron | 25.0% |
| !! | AGTCCTTATTATAAAGTATC+GGG | + | chr2_3:58791420-58791439 | Msa0302120:intron | 25.0% |
| ! | TTACCCGATACTTTATAATA+AGG | - | chr2_3:58791426-58791445 | None:intergenic | 25.0% |
| ! | TATAGTAACAGATTTCATCT+TGG | - | chr2_3:58791616-58791635 | None:intergenic | 25.0% |
| ! | AAATCTGTTACTATATGCTT+TGG | + | chr2_3:58791621-58791640 | Msa0302120:intron | 25.0% |
| ! | ATAGAGATATTCAGAATATG+TGG | + | chr2_3:58791705-58791724 | Msa0302120:intron | 25.0% |
| ! | TTCTATTGCAAATGAAGTTT+CGG | + | chr2_3:58791940-58791959 | Msa0302120:intron | 25.0% |
| ! | TAATATTCTCATCTTTGCTA+TGG | + | chr2_3:58791995-58792014 | Msa0302120:intron | 25.0% |
| ! | ATTCATCAAATAAAATGACG+TGG | - | chr2_3:58792163-58792182 | None:intergenic | 25.0% |
| ! | AAATAAAATGCAAGTTTAGC+GGG | - | chr2_3:58792263-58792282 | None:intergenic | 25.0% |
| ! | TTAGAGATATAAACAAGTCT+TGG | - | chr2_3:58792321-58792340 | None:intergenic | 25.0% |
| ! | AAAGAAACACACATTTAATG+TGG | - | chr2_3:58792419-58792438 | None:intergenic | 25.0% |
| ! | TTGAAAATCAGCAGTTTATT+AGG | + | chr2_3:58792577-58792596 | Msa0302120:intron | 25.0% |
| ! | TGAAAATCAGCAGTTTATTA+GGG | + | chr2_3:58792578-58792597 | Msa0302120:intron | 25.0% |
| ! | TTCACTTAGAGAATACATTA+TGG | + | chr2_3:58792634-58792653 | Msa0302120:intron | 25.0% |
| !!! | CTTTTGAAACAACACATTAT+TGG | - | chr2_3:58792915-58792934 | None:intergenic | 25.0% |
| ! | AAATCAAGAAATGTGTTTCT+GGG | + | chr2_3:58793072-58793091 | Msa0302120:CDS | 25.0% |
| !! | ATTTTTGCCTGTAAATTCAA+AGG | + | chr2_3:58793113-58793132 | Msa0302120:CDS | 25.0% |
| ! | TTTTCAGTACTATCTGTTTC+TGG | + | chr2_3:58788435-58788454 | Msa0302120:five_prime_UTR | 30.0% |
| AGGCATTAATGCAATGTTAT+GGG | + | chr2_3:58788499-58788518 | Msa0302120:CDS | 30.0% | |
| AAAATATGTTCCTTGTGGAT+AGG | + | chr2_3:58788754-58788773 | Msa0302120:intron | 30.0% | |
| AAATTCTAAACCTATCCACA+AGG | - | chr2_3:58788767-58788786 | None:intergenic | 30.0% | |
| ! | TGTGGATAGGTTTAGAATTT+AGG | + | chr2_3:58788767-58788786 | Msa0302120:intron | 30.0% |
| ! | ATGTTTGAAGTTCTTTCCAT+CGG | + | chr2_3:58788940-58788959 | Msa0302120:intron | 30.0% |
| AATGTTCATTGTTGTGATGA+AGG | + | chr2_3:58789031-58789050 | Msa0302120:intron | 30.0% | |
| ATGTTCATTGTTGTGATGAA+GGG | + | chr2_3:58789032-58789051 | Msa0302120:intron | 30.0% | |
| ACTTGGTATGTATACATGTA+AGG | - | chr2_3:58789125-58789144 | None:intergenic | 30.0% | |
| ! | TTTTCTGTTTTGTCATACAG+TGG | + | chr2_3:58789176-58789195 | Msa0302120:intron | 30.0% |
| CTATGCATTGCATATGATTA+TGG | + | chr2_3:58789245-58789264 | Msa0302120:intron | 30.0% | |
| ! | TTTTCAAAACTTAGTGACCA+AGG | - | chr2_3:58789587-58789606 | None:intergenic | 30.0% |
| !! | AGAAATTTTGATGCAAGACT+TGG | - | chr2_3:58789614-58789633 | None:intergenic | 30.0% |
| ! | GGAATTTAGAGTTAGTTAGT+TGG | + | chr2_3:58789754-58789773 | Msa0302120:intron | 30.0% |
| ! | TTAAATAGTCTTGCAAACAC+TGG | - | chr2_3:58790144-58790163 | None:intergenic | 30.0% |
| ! | ATAAAGTAACATGGAAGTAC+AGG | - | chr2_3:58790181-58790200 | None:intergenic | 30.0% |
| ! | AAGCTTGAACAACTTTTACT+AGG | + | chr2_3:58790427-58790446 | Msa0302120:CDS | 30.0% |
| ! | TTGAACAACTTTTACTAGGA+AGG | + | chr2_3:58790431-58790450 | Msa0302120:CDS | 30.0% |
| ! | TGAACAACTTTTACTAGGAA+GGG | + | chr2_3:58790432-58790451 | Msa0302120:CDS | 30.0% |
| TGCTCAAAATGACAAGTTAA+AGG | - | chr2_3:58790624-58790643 | None:intergenic | 30.0% | |
| !! | TGTTGATGGTAAAGTAATAG+GGG | + | chr2_3:58790978-58790997 | Msa0302120:intron | 30.0% |
| GCATAATTGTAACAGTTGTT+TGG | + | chr2_3:58791068-58791087 | Msa0302120:intron | 30.0% | |
| AGTTCGTCAGTAAGAATAAA+AGG | + | chr2_3:58791091-58791110 | Msa0302120:intron | 30.0% | |
| GTTCGTCAGTAAGAATAAAA+GGG | + | chr2_3:58791092-58791111 | Msa0302120:intron | 30.0% | |
| ATGAAGAATCAAGAACACTT+AGG | - | chr2_3:58791352-58791371 | None:intergenic | 30.0% | |
| ACTTTATAATAAGGACTGGA+CGG | - | chr2_3:58791417-58791436 | None:intergenic | 30.0% | |
| CGATACTTTATAATAAGGAC+TGG | - | chr2_3:58791421-58791440 | None:intergenic | 30.0% | |
| !! | AAGTATCGGGTAATTGAAAT+CGG | + | chr2_3:58791433-58791452 | Msa0302120:intron | 30.0% |
| GGTAATTGAAATCGGATTAT+TGG | + | chr2_3:58791441-58791460 | Msa0302120:intron | 30.0% | |
| TGAAATCGGATTATTGGTAA+TGG | + | chr2_3:58791447-58791466 | Msa0302120:intron | 30.0% | |
| TAATGGAATTGTGAGAAGTT+TGG | + | chr2_3:58791464-58791483 | Msa0302120:intron | 30.0% | |
| TAATTCAGCATTAGTGTTCT+AGG | + | chr2_3:58791542-58791561 | Msa0302120:intron | 30.0% | |
| ATTAACCAAGGTTCAAATGT+TGG | + | chr2_3:58791575-58791594 | Msa0302120:intron | 30.0% | |
| AAAAACCAACATTTGAACCT+TGG | - | chr2_3:58791583-58791602 | None:intergenic | 30.0% | |
| !! | TATATGCTTTGGAATTTCGA+GGG | + | chr2_3:58791632-58791651 | Msa0302120:intron | 30.0% |
| ATAGGATTTAACTCAGGTTA+GGG | - | chr2_3:58791750-58791769 | None:intergenic | 30.0% | |
| TCTATCATAGGATTTAACTC+AGG | - | chr2_3:58791756-58791775 | None:intergenic | 30.0% | |
| ! | GTCTTGTAGATCTATTTCTT+GGG | + | chr2_3:58791837-58791856 | Msa0302120:intron | 30.0% |
| ! | AGATGATAGAATTTTGTGCA+AGG | - | chr2_3:58791919-58791938 | None:intergenic | 30.0% |
| AATAAATGTTGGGCAGTAAA+GGG | - | chr2_3:58792041-58792060 | None:intergenic | 30.0% | |
| AAATAAATGTTGGGCAGTAA+AGG | - | chr2_3:58792042-58792061 | None:intergenic | 30.0% | |
| ! | TTGCATGTTTTATAGTTGTG+TGG | + | chr2_3:58792067-58792086 | Msa0302120:intron | 30.0% |
| !! | GCTGATTTTCAAAAACAGTT+TGG | - | chr2_3:58792569-58792588 | None:intergenic | 30.0% |
| AATAACACCAGAATTATACC+AGG | - | chr2_3:58792604-58792623 | None:intergenic | 30.0% | |
| ! | AATGAGTCTCAACAGTTTTA+TGG | + | chr2_3:58792888-58792907 | Msa0302120:intron | 30.0% |
| ! | AAACTTGAAGTATTCTGTAC+AGG | + | chr2_3:58792974-58792993 | Msa0302120:intron | 30.0% |
| GAAATCAAGAAATGTGTTTC+TGG | + | chr2_3:58793071-58793090 | Msa0302120:CDS | 30.0% | |
| TTCGATACCTTTGAATTTAC+AGG | - | chr2_3:58793123-58793142 | None:intergenic | 30.0% | |
| !! | AAAGGTATCGAATGTAAGAT+TGG | + | chr2_3:58793131-58793150 | Msa0302120:CDS | 30.0% |
| ! | CAGATAGATGATAATGTGAA+TGG | + | chr2_3:58793183-58793202 | Msa0302120:exon | 30.0% |
| GTGAATGGTTTATAGAGTAA+CGG | + | chr2_3:58793198-58793217 | Msa0302120:three_prime_UTR | 30.0% | |
| ! | GGATGCAACCATAAATATTT+TGG | - | chr2_3:58793229-58793248 | None:intergenic | 30.0% |
| CTACGAAACTTAGAAAGATC+AGG | - | chr2_3:58788462-58788481 | None:intergenic | 35.0% | |
| ! | GAGGCATTAATGCAATGTTA+TGG | + | chr2_3:58788498-58788517 | Msa0302120:CDS | 35.0% |
| GGCATTAATGCAATGTTATG+GGG | + | chr2_3:58788500-58788519 | Msa0302120:CDS | 35.0% | |
| TTAATGCAATGTTATGGGGA+TGG | + | chr2_3:58788504-58788523 | Msa0302120:CDS | 35.0% | |
| CAAGAAAATTTGGAGGATGA+AGG | - | chr2_3:58788680-58788699 | None:intergenic | 35.0% | |
| ! | CTTCATCCTCCAAATTTTCT+TGG | + | chr2_3:58788678-58788697 | Msa0302120:CDS | 35.0% |
| AGCATACCAAGAAAATTTGG+AGG | - | chr2_3:58788687-58788706 | None:intergenic | 35.0% | |
| ! | TCCAAATTTTCTTGGTATGC+TGG | + | chr2_3:58788686-58788705 | Msa0302120:intron | 35.0% |
| ! | CCAAATTTTCTTGGTATGCT+GGG | + | chr2_3:58788687-58788706 | Msa0302120:intron | 35.0% |
| TGGCTTATCTGAATATCTTG+AGG | - | chr2_3:58789058-58789077 | None:intergenic | 35.0% | |
| TAAGCCAGACAACTAAAGTT+AGG | + | chr2_3:58789071-58789090 | Msa0302120:CDS | 35.0% | |
| CATAGTTACCATCAACATGA+GGG | - | chr2_3:58789102-58789121 | None:intergenic | 35.0% | |
| ! | GTTTTGTCATACAGTGGTTA+TGG | + | chr2_3:58789182-58789201 | Msa0302120:intron | 35.0% |
| GCATGCATTTAGATTTACCT+GGG | + | chr2_3:58789267-58789286 | Msa0302120:intron | 35.0% | |
| TGTTGCAGAGAAAGAAAGAA+TGG | - | chr2_3:58789376-58789395 | None:intergenic | 35.0% | |
| CATCATTTGTAACCAGGTTA+AGG | + | chr2_3:58789408-58789427 | Msa0302120:intron | 35.0% | |
| ! | AATTTGAGATCACCTTAACC+TGG | - | chr2_3:58789423-58789442 | None:intergenic | 35.0% |
| AGGTTAAGGTGATCTCAAAT+TGG | + | chr2_3:58789422-58789441 | Msa0302120:intron | 35.0% | |
| !!! | TGTTTTGATCCACATTTGTG+AGG | + | chr2_3:58789474-58789493 | Msa0302120:intron | 35.0% |
| GTTAGTTGGTTAGAGTTAGT+TGG | + | chr2_3:58789768-58789787 | Msa0302120:intron | 35.0% | |
| !! | ACCTTTGAAATTTGACTCCA+GGG | - | chr2_3:58789843-58789862 | None:intergenic | 35.0% |
| AGTCAAATTTCAAAGGTGGT+TGG | + | chr2_3:58789846-58789865 | Msa0302120:intron | 35.0% | |
| GTCAAATTTCAAAGGTGGTT+GGG | + | chr2_3:58789847-58789866 | Msa0302120:intron | 35.0% | |
| TCAAATTTCAAAGGTGGTTG+GGG | + | chr2_3:58789848-58789867 | Msa0302120:intron | 35.0% | |
| CTTGAGGAATCAATTGAGAT+AGG | - | chr2_3:58789921-58789940 | None:intergenic | 35.0% | |
| ! | TATGCATTTCTAGATCCTGT+AGG | - | chr2_3:58789985-58790004 | None:intergenic | 35.0% |
| !! | TCAAAAGTGTTCCTGCTTTA+AGG | + | chr2_3:58790238-58790257 | Msa0302120:intron | 35.0% |
| ! | TTTTACAGAGGACGTTAAGT+GGG | - | chr2_3:58790399-58790418 | None:intergenic | 35.0% |
| ! | TTTTTACAGAGGACGTTAAG+TGG | - | chr2_3:58790400-58790419 | None:intergenic | 35.0% |
| AAGGGAGTTTCACATAAGTT+TGG | + | chr2_3:58790450-58790469 | Msa0302120:CDS | 35.0% | |
| AGGGAGTTTCACATAAGTTT+GGG | + | chr2_3:58790451-58790470 | Msa0302120:CDS | 35.0% | |
| TCAATCTGATGTACTCGTAT+TGG | - | chr2_3:58790487-58790506 | None:intergenic | 35.0% | |
| AAAGGCAACAATCAGGTAAA+CGG | - | chr2_3:58790606-58790625 | None:intergenic | 35.0% | |
| ACAAGTTAAAGGCAACAATC+AGG | - | chr2_3:58790613-58790632 | None:intergenic | 35.0% | |
| GTGTTAGTACATATGCAAGT+TGG | + | chr2_3:58790792-58790811 | Msa0302120:intron | 35.0% | |
| !! | GTTGATGGTAAAGTAATAGG+GGG | + | chr2_3:58790979-58790998 | Msa0302120:intron | 35.0% |
| GTATGGTAGTAGTAATAGGA+AGG | + | chr2_3:58791025-58791044 | Msa0302120:intron | 35.0% | |
| AGTAGTAATAGGAAGGAAAC+AGG | + | chr2_3:58791032-58791051 | Msa0302120:intron | 35.0% | |
| GTAGTAATAGGAAGGAAACA+GGG | + | chr2_3:58791033-58791052 | Msa0302120:intron | 35.0% | |
| TAGTAATAGGAAGGAAACAG+GGG | + | chr2_3:58791034-58791053 | Msa0302120:intron | 35.0% | |
| GTCAGTAAGAATAAAAGGGT+GGG | + | chr2_3:58791096-58791115 | Msa0302120:intron | 35.0% | |
| TCAGTAAGAATAAAAGGGTG+GGG | + | chr2_3:58791097-58791116 | Msa0302120:intron | 35.0% | |
| TAACGGAATCAGAATCAAAC+AGG | + | chr2_3:58791292-58791311 | Msa0302120:intron | 35.0% | |
| AAGTTTGGAGAAGTTGTGTT+TGG | + | chr2_3:58791479-58791498 | Msa0302120:intron | 35.0% | |
| GGACAACATTGAATTAACCA+AGG | + | chr2_3:58791563-58791582 | Msa0302120:intron | 35.0% | |
| AGTAACAGATTTCATCTTGG+AGG | - | chr2_3:58791613-58791632 | None:intergenic | 35.0% | |
| !! | CTATATGCTTTGGAATTTCG+AGG | + | chr2_3:58791631-58791650 | Msa0302120:intron | 35.0% |
| ATTCTTTGCAAGTGTCTGTA+AGG | - | chr2_3:58791679-58791698 | None:intergenic | 35.0% | |
| TACAGACACTTGCAAAGAAT+AGG | + | chr2_3:58791679-58791698 | Msa0302120:intron | 35.0% | |
| CATAGGATTTAACTCAGGTT+AGG | - | chr2_3:58791751-58791770 | None:intergenic | 35.0% | |
| TCAGTTCAAAGGTCTATCAT+AGG | - | chr2_3:58791768-58791787 | None:intergenic | 35.0% | |
| GACTATAGAGTTCAGTTCAA+AGG | - | chr2_3:58791779-58791798 | None:intergenic | 35.0% | |
| CTATACCTCTGCTAATAGTT+TGG | + | chr2_3:58791798-58791817 | Msa0302120:intron | 35.0% | |
| ATATGCCAAACTATTAGCAG+AGG | - | chr2_3:58791806-58791825 | None:intergenic | 35.0% | |
| ! | GTTTGGCATATAGTTTTCCT+TGG | + | chr2_3:58791815-58791834 | Msa0302120:intron | 35.0% |
| GAAATAGATCTACAAGACCA+AGG | - | chr2_3:58791835-58791854 | None:intergenic | 35.0% | |
| ! | GGTCTTGTAGATCTATTTCT+TGG | + | chr2_3:58791836-58791855 | Msa0302120:intron | 35.0% |
| GAAACACAAGACTTGTGATA+TGG | + | chr2_3:58792194-58792213 | Msa0302120:intron | 35.0% | |
| ! | TAACCTTCCTGAATTTTACG+AGG | + | chr2_3:58792497-58792516 | Msa0302120:CDS | 35.0% |
| ACCTAGAAAGAATGCATTTC+CGG | - | chr2_3:58792736-58792755 | None:intergenic | 35.0% | |
| ! | ACTTTTACTTTGTATCCGAG+TGG | - | chr2_3:58792837-58792856 | None:intergenic | 35.0% |
| ATTTCGTTAGCATGGTCATT+GGG | + | chr2_3:58793011-58793030 | Msa0302120:CDS | 35.0% | |
| ! | CACAGTTTTCTTCAAGGAAT+CGG | - | chr2_3:58793045-58793064 | None:intergenic | 35.0% |
| CGGATCTGCCAAAATATTTA+TGG | + | chr2_3:58793218-58793237 | Msa0302120:three_prime_UTR | 35.0% | |
| CAGTCTACATAGAATAGAAC+TGG | - | chr2_3:58793250-58793269 | None:intergenic | 35.0% | |
| TCGTAGTGCAGACTGAAAAA+TGG | + | chr2_3:58788476-58788495 | Msa0302120:exon | 40.0% | |
| TAGTGCAGACTGAAAAATGG+AGG | + | chr2_3:58788479-58788498 | Msa0302120:exon | 40.0% | |
| ! | TAAGCTAAGGTTGGATTGGA+AGG | - | chr2_3:58788558-58788577 | None:intergenic | 40.0% |
| TGCATAAGCTAAGGTTGGAT+TGG | - | chr2_3:58788562-58788581 | None:intergenic | 40.0% | |
| CTTTCTGCATAAGCTAAGGT+TGG | - | chr2_3:58788567-58788586 | None:intergenic | 40.0% | |
| ACGTCTTTCTGCATAAGCTA+AGG | - | chr2_3:58788571-58788590 | None:intergenic | 40.0% | |
| CCCAGCATACCAAGAAAATT+TGG | - | chr2_3:58788690-58788709 | None:intergenic | 40.0% | |
| AGCTCCTAACTTTAGTTGTC+TGG | - | chr2_3:58789078-58789097 | None:intergenic | 40.0% | |
| GCATAGTTACCATCAACATG+AGG | - | chr2_3:58789103-58789122 | None:intergenic | 40.0% | |
| GGCATGCATTTAGATTTACC+TGG | + | chr2_3:58789266-58789285 | Msa0302120:intron | 40.0% | |
| ATCGTGATGGTTAATTTCCC+AGG | - | chr2_3:58789287-58789306 | None:intergenic | 40.0% | |
| ! | AATTGGCCTACATTCCTGTT+TGG | + | chr2_3:58789439-58789458 | Msa0302120:intron | 40.0% |
| AACAGTCCAAACAGGAATGT+AGG | - | chr2_3:58789448-58789467 | None:intergenic | 40.0% | |
| CATGCAATAACAGTCCAAAC+AGG | - | chr2_3:58789456-58789475 | None:intergenic | 40.0% | |
| TCCACATTTGTGAGGCAAAT+AGG | + | chr2_3:58789482-58789501 | Msa0302120:intron | 40.0% | |
| ACCTATTTGCCTCACAAATG+TGG | - | chr2_3:58789486-58789505 | None:intergenic | 40.0% | |
| !! | TTACTTTTGCCTTGAGACCT+TGG | + | chr2_3:58789567-58789586 | Msa0302120:intron | 40.0% |
| AAAACTCGGACTGTTAGTTG+AGG | + | chr2_3:58789733-58789752 | Msa0302120:intron | 40.0% | |
| ACCCTGGAGTCAAATTTCAA+AGG | + | chr2_3:58789839-58789858 | Msa0302120:intron | 40.0% | |
| !! | CACCTTTGAAATTTGACTCC+AGG | - | chr2_3:58789844-58789863 | None:intergenic | 40.0% |
| CTGGAGTCAAATTTCAAAGG+TGG | + | chr2_3:58789842-58789861 | Msa0302120:intron | 40.0% | |
| AAGTGGGACATCAACATCAA+CGG | - | chr2_3:58790383-58790402 | None:intergenic | 40.0% | |
| !!! | GCTTCTCGTCATTTTTACAG+AGG | - | chr2_3:58790411-58790430 | None:intergenic | 40.0% |
| ! | AGTACATCAGATTGACTCAG+TGG | + | chr2_3:58790492-58790511 | Msa0302120:CDS | 40.0% |
| AAGGCAACAATCAGGTAAAC+GGG | - | chr2_3:58790605-58790624 | None:intergenic | 40.0% | |
| !!! | TTGTCATTTTGAGCAGCTAC+TGG | + | chr2_3:58790629-58790648 | Msa0302120:intron | 40.0% |
| ! | ACTGGATCGACTTTGACAAA+TGG | + | chr2_3:58790647-58790666 | Msa0302120:CDS | 40.0% |
| ! | CTGGATCGACTTTGACAAAT+GGG | + | chr2_3:58790648-58790667 | Msa0302120:CDS | 40.0% |
| GAGCGTATGGTAGTAGTAAT+AGG | + | chr2_3:58791021-58791040 | Msa0302120:intron | 40.0% | |
| CGTCAGTAAGAATAAAAGGG+TGG | + | chr2_3:58791095-58791114 | Msa0302120:intron | 40.0% | |
| TAAGAATAAAAGGGTGGGGA+GGG | + | chr2_3:58791101-58791120 | Msa0302120:intron | 40.0% | |
| TTGTGTTTGGAAGCTGAACA+TGG | + | chr2_3:58791492-58791511 | Msa0302120:intron | 40.0% | |
| TAACTCAGGTTAGGGAATCA+TGG | - | chr2_3:58791742-58791761 | None:intergenic | 40.0% | |
| TGACCTCGTAAAATTCAGGA+AGG | - | chr2_3:58792503-58792522 | None:intergenic | 40.0% | |
| ACACTGACCTCGTAAAATTC+AGG | - | chr2_3:58792507-58792526 | None:intergenic | 40.0% | |
| AGTGTTTGTAAACCACGACT+TGG | + | chr2_3:58792522-58792541 | Msa0302120:intron | 40.0% | |
| GTGTTTGTAAACCACGACTT+GGG | + | chr2_3:58792523-58792542 | Msa0302120:intron | 40.0% | |
| ATTAGGGCCTGGTATAATTC+TGG | + | chr2_3:58792594-58792613 | Msa0302120:intron | 40.0% | |
| AAAAAAATGTTCGGCGCTTC+CGG | + | chr2_3:58792714-58792733 | Msa0302120:intron | 40.0% | |
| TCCGGAAATGCATTCTTTCT+AGG | + | chr2_3:58792732-58792751 | Msa0302120:intron | 40.0% | |
| CATTTCGTTAGCATGGTCAT+TGG | + | chr2_3:58793010-58793029 | Msa0302120:CDS | 40.0% | |
| CGATTCCTTGAAGAAAACTG+TGG | + | chr2_3:58793043-58793062 | Msa0302120:CDS | 40.0% | |
| ! | GTCATCCACAGTTTTCTTCA+AGG | - | chr2_3:58793051-58793070 | None:intergenic | 40.0% |
| ! | TTCACGAATGTTTGTTGCCC+GGG | - | chr2_3:58788607-58788626 | None:intergenic | 45.0% |
| ! | GTTCACGAATGTTTGTTGCC+CGG | - | chr2_3:58788608-58788627 | None:intergenic | 45.0% |
| ACTTAGTGACCAAGGTCTCA+AGG | - | chr2_3:58789579-58789598 | None:intergenic | 45.0% | |
| CTGACCATCTCTAACAGTCT+CGG | - | chr2_3:58789796-58789815 | None:intergenic | 45.0% | |
| ! | TTTTATCCCGTCGAACGCTT+AGG | + | chr2_3:58790108-58790127 | Msa0302120:intron | 45.0% |
| AACATGACCTAAGCGTTCGA+CGG | - | chr2_3:58790118-58790137 | None:intergenic | 45.0% | |
| AAGTCACTGCACCTTAAAGC+AGG | - | chr2_3:58790252-58790271 | None:intergenic | 45.0% | |
| !! | GCTTTAAGGTGCAGTGACTT+TGG | + | chr2_3:58790252-58790271 | Msa0302120:intron | 45.0% |
| ACATCAACGGCACAAAGACT+TGG | - | chr2_3:58790370-58790389 | None:intergenic | 45.0% | |
| ! | GATCGACTTTGACAAATGGG+AGG | + | chr2_3:58790651-58790670 | Msa0302120:CDS | 45.0% |
| GTAAGAATAAAAGGGTGGGG+AGG | + | chr2_3:58791100-58791119 | Msa0302120:intron | 45.0% | |
| AAGAATAAAAGGGTGGGGAG+GGG | + | chr2_3:58791102-58791121 | Msa0302120:intron | 45.0% | |
| AATAAGGACTGGACGGTAAG+AGG | - | chr2_3:58791410-58791429 | None:intergenic | 45.0% | |
| CGACAAAGGGTTAGACATGA+CGG | - | chr2_3:58791870-58791889 | None:intergenic | 45.0% | |
| CATGCAGAAGACTCGACAAA+GGG | - | chr2_3:58791883-58791902 | None:intergenic | 45.0% | |
| ACATGCAGAAGACTCGACAA+AGG | - | chr2_3:58791884-58791903 | None:intergenic | 45.0% | |
| !! | GGGCTTTGAAGAACACTGAA+TGG | + | chr2_3:58792543-58792562 | Msa0302120:intron | 45.0% |
| ATCAGCAGTTTATTAGGGCC+TGG | + | chr2_3:58792583-58792602 | Msa0302120:intron | 45.0% | |
| GTCCTCACATTTCGTTAGCA+TGG | + | chr2_3:58793003-58793022 | Msa0302120:CDS | 45.0% | |
| GACCATGCTAACGAAATGTG+AGG | - | chr2_3:58793008-58793027 | None:intergenic | 45.0% | |
| !!! | TTTATTTTTTTAAAACTTAA+CGG | + | chr2_3:58791275-58791294 | Msa0302120:intron | 5.0% |
| ! | TCACGAATGTTTGTTGCCCG+GGG | - | chr2_3:58788606-58788625 | None:intergenic | 50.0% |
| TGGACGCATGCTTTGTGAAG+TGG | - | chr2_3:58788630-58788649 | None:intergenic | 50.0% | |
| AGGAGCTTCCCTCATGTTGA+TGG | + | chr2_3:58789091-58789110 | Msa0302120:CDS | 50.0% | |
| GGAACCGAGACTGTTAGAGA+TGG | + | chr2_3:58789789-58789808 | Msa0302120:intron | 50.0% | |
| CCATTGAGCCCAGGAAAACT+CGG | + | chr2_3:58789943-58789962 | Msa0302120:intron | 50.0% | |
| ACATGACCTAAGCGTTCGAC+GGG | - | chr2_3:58790117-58790136 | None:intergenic | 50.0% | |
| AACAACCTCGACTGAGAGGA+AGG | - | chr2_3:58790704-58790723 | None:intergenic | 50.0% | |
| CTCTCAGTCGAGGTTGTTCA+CGG | + | chr2_3:58790706-58790725 | Msa0302120:CDS | 50.0% | |
| TGCTTAATGTGTGTCGCGAG+TGG | + | chr2_3:58790853-58790872 | Msa0302120:intron | 50.0% | |
| TGCTTAATGTGTGTCGCGAG+TGG | + | chr2_3:58790853-58790872 | Msa0302120:intron | 50.0% | |
| ! | CTTCCTAGTAGGAGAGCGTA+TGG | + | chr2_3:58791008-58791027 | Msa0302120:intron | 50.0% |
| CTACCATACGCTCTCCTACT+AGG | - | chr2_3:58791014-58791033 | None:intergenic | 50.0% | |
| CAAAGGGTTAGACATGACGG+AGG | - | chr2_3:58791867-58791886 | None:intergenic | 50.0% | |
| GTTCTTCAAAGCCCAAGTCG+TGG | - | chr2_3:58792537-58792556 | None:intergenic | 50.0% | |
| GCTAACGAAATGTGAGGACG+TGG | - | chr2_3:58793002-58793021 | None:intergenic | 50.0% | |
| ! | TGAAGGAGCGCAATAGGAGG+TGG | - | chr2_3:58788663-58788682 | None:intergenic | 55.0% |
| ! | GGATGAAGGAGCGCAATAGG+AGG | - | chr2_3:58788666-58788685 | None:intergenic | 55.0% |
| ! | GGAGGATGAAGGAGCGCAAT+AGG | - | chr2_3:58788669-58788688 | None:intergenic | 55.0% |
| ! | CCGAGTTTTCCTGGGCTCAA+TGG | - | chr2_3:58789946-58789965 | None:intergenic | 55.0% |
| TGAGCCCAGGAAAACTCGGT+CGG | + | chr2_3:58789947-58789966 | Msa0302120:intron | 55.0% | |
| ! | CCATCCGACCGAGTTTTCCT+GGG | - | chr2_3:58789954-58789973 | None:intergenic | 55.0% |
| ! | ACCATCCGACCGAGTTTTCC+TGG | - | chr2_3:58789955-58789974 | None:intergenic | 55.0% |
| CGGATGGTCTGATCACCTAC+AGG | + | chr2_3:58789967-58789986 | Msa0302120:intron | 55.0% | |
| CGTGAACAACCTCGACTGAG+AGG | - | chr2_3:58790708-58790727 | None:intergenic | 55.0% | |
| TCAGTCGAGGTTGTTCACGG+TGG | + | chr2_3:58790709-58790728 | Msa0302120:CDS | 55.0% | |
| CAGTCGAGGTTGTTCACGGT+GGG | + | chr2_3:58790710-58790729 | Msa0302120:CDS | 55.0% | |
| ! | TGTTCACGGTGGGCTTGTAG+AGG | + | chr2_3:58790720-58790739 | Msa0302120:CDS | 55.0% |
| GGTGGGGAGGGGAATTGAAA+AGG | + | chr2_3:58791113-58791132 | Msa0302120:intron | 55.0% | |
| TTTGTTGCCCGGGGTGGCAA+GGG | - | chr2_3:58788597-58788616 | None:intergenic | 60.0% | |
| ! | CGAATGTTTGTTGCCCGGGG+TGG | - | chr2_3:58788603-58788622 | None:intergenic | 60.0% |
| ! | GCAATAGGAGGTGGCGGCAA+GGG | - | chr2_3:58788654-58788673 | None:intergenic | 60.0% |
| ! | AGGAGCGCAATAGGAGGTGG+CGG | - | chr2_3:58788660-58788679 | None:intergenic | 60.0% |
| CCTGGGCTCAATGGAGCTTG+AGG | - | chr2_3:58789937-58789956 | None:intergenic | 60.0% | |
| CCTCAAGCTCCATTGAGCCC+AGG | + | chr2_3:58789934-58789953 | Msa0302120:intron | 60.0% | |
| CCCAGGAAAACTCGGTCGGA+TGG | + | chr2_3:58789951-58789970 | Msa0302120:intron | 60.0% | |
| ACGCACCTTCCTCTCAGTCG+AGG | + | chr2_3:58790696-58790715 | Msa0302120:CDS | 60.0% | |
| GGGGGCTGAGACTTCCTAGT+AGG | + | chr2_3:58790997-58791016 | Msa0302120:intron | 60.0% | |
| ! | GTTTGTTGCCCGGGGTGGCA+AGG | - | chr2_3:58788598-58788617 | None:intergenic | 65.0% |
| ! | CGCAATAGGAGGTGGCGGCA+AGG | - | chr2_3:58788655-58788674 | None:intergenic | 65.0% |
| GACGTGAGCCCTTGCCACCC+CGG | + | chr2_3:58788586-58788605 | Msa0302120:CDS | 70.0% | |
| ACGTGAGCCCTTGCCACCCC+GGG | + | chr2_3:58788587-58788606 | Msa0302120:CDS | 70.0% | |
| ! | TAGGAGGTGGCGGCAAGGGC+TGG | - | chr2_3:58788650-58788669 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 58788414 | 58793307 | 58788414 | ID=Msa0302120;Name=Msa0302120 |
| chr2_3 | mRNA | 58788414 | 58793307 | 58788414 | ID=Msa0302120-mRNA-1;Parent=Msa0302120;Name=Msa0302120-mRNA-1;_AED=0.12;_eAED=0.12;_QI=81|1|1|1|1|1|6|114|301 |
| chr2_3 | exon | 58788414 | 58788699 | 58788414 | ID=Msa0302120-mRNA-1:exon:18995;Parent=Msa0302120-mRNA-1 |
| chr2_3 | exon | 58789053 | 58789142 | 58789053 | ID=Msa0302120-mRNA-1:exon:18996;Parent=Msa0302120-mRNA-1 |
| chr2_3 | exon | 58790302 | 58790551 | 58790302 | ID=Msa0302120-mRNA-1:exon:18997;Parent=Msa0302120-mRNA-1 |
| chr2_3 | exon | 58790645 | 58790741 | 58790645 | ID=Msa0302120-mRNA-1:exon:18998;Parent=Msa0302120-mRNA-1 |
| chr2_3 | exon | 58792453 | 58792518 | 58792453 | ID=Msa0302120-mRNA-1:exon:18999;Parent=Msa0302120-mRNA-1 |
| chr2_3 | exon | 58792996 | 58793307 | 58792996 | ID=Msa0302120-mRNA-1:exon:19000;Parent=Msa0302120-mRNA-1 |
| chr2_3 | five_prime_UTR | 58788414 | 58788494 | 58788414 | ID=Msa0302120-mRNA-1:five_prime_utr;Parent=Msa0302120-mRNA-1 |
| chr2_3 | CDS | 58788495 | 58788699 | 58788495 | ID=Msa0302120-mRNA-1:cds;Parent=Msa0302120-mRNA-1 |
| chr2_3 | CDS | 58789053 | 58789142 | 58789053 | ID=Msa0302120-mRNA-1:cds;Parent=Msa0302120-mRNA-1 |
| chr2_3 | CDS | 58790302 | 58790551 | 58790302 | ID=Msa0302120-mRNA-1:cds;Parent=Msa0302120-mRNA-1 |
| chr2_3 | CDS | 58790645 | 58790741 | 58790645 | ID=Msa0302120-mRNA-1:cds;Parent=Msa0302120-mRNA-1 |
| chr2_3 | CDS | 58792453 | 58792518 | 58792453 | ID=Msa0302120-mRNA-1:cds;Parent=Msa0302120-mRNA-1 |
| chr2_3 | CDS | 58792996 | 58793193 | 58792996 | ID=Msa0302120-mRNA-1:cds;Parent=Msa0302120-mRNA-1 |
| chr2_3 | three_prime_UTR | 58793194 | 58793307 | 58793194 | ID=Msa0302120-mRNA-1:three_prime_utr;Parent=Msa0302120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
