AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0302410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0302410 MtrunA17_Chr2g0328231 78.729 362 43 4 1 328 1 362 0.0 517
Msa0302410 MtrunA17_Chr2g0328241 72.703 370 58 3 2 328 305 674 1.16e-160 464
Msa0302410 MtrunA17_Chr2g0328251 64.767 386 77 4 2 328 305 690 6.59e-147 429
Msa0302410 MtrunA17_Chr2g0327251 68.012 347 71 2 2 328 238 564 5.23e-136 397
Msa0302410 MtrunA17_Chr4g0024031 65.600 375 78 3 2 328 295 666 6.47e-133 393
Msa0302410 MtrunA17_Chr4g0071151 72.874 247 53 3 94 327 3 248 7.13e-119 343
Msa0302410 MtrunA17_Chr3g0111661 38.814 371 160 6 8 327 282 636 2.17e-67 222
Msa0302410 MtrunA17_Chr5g0435301 38.525 366 156 8 11 324 765 1113 3.45e-61 211
Msa0302410 MtrunA17_Chr4g0001231 35.230 369 170 7 9 324 266 618 6.34e-51 178
Msa0302410 MtrunA17_Chr4g0070931 34.521 365 172 7 9 320 268 618 1.67e-47 169
Msa0302410 MtrunA17_Chr4g0074301 34.521 365 172 7 9 320 268 618 8.92e-47 167
Msa0302410 MtrunA17_Chr3g0111741 47.150 193 87 3 129 321 152 329 3.58e-46 160
Msa0302410 MtrunA17_Chr4g0071141 68.750 96 30 0 1 96 1 96 3.29e-35 124
Msa0302410 MtrunA17_Chr3g0111731 36.458 192 98 4 130 320 36 204 8.21e-26 103
Msa0302410 MtrunA17_Chr3g0111691 54.412 68 31 0 255 322 15 82 7.57e-18 77.8
Msa0302410 MtrunA17_Chr4g0074271 51.948 77 33 1 244 320 375 447 1.37e-16 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0302410 AT1G13790.2 40.884 362 152 7 8 323 381 726 6.27e-60 204
Msa0302410 AT1G13790.1 40.884 362 152 7 8 323 381 726 6.27e-60 204
Msa0302410 AT3G12550.5 37.568 370 163 8 9 327 281 633 1.06e-59 202
Msa0302410 AT3G12550.4 37.466 371 163 9 9 327 281 634 5.49e-58 197
Msa0302410 AT3G12550.2 37.466 371 163 9 9 327 281 634 5.49e-58 197
Msa0302410 AT3G12550.1 37.466 371 163 9 9 327 281 634 5.49e-58 197
Msa0302410 AT1G15910.1 35.580 371 173 7 2 321 269 624 1.02e-51 181
Msa0302410 AT4G00380.2 34.959 369 174 7 2 319 242 595 3.46e-50 176
Msa0302410 AT4G00380.1 34.959 369 174 7 2 319 270 623 5.14e-50 176
Msa0302410 AT4G00380.3 34.959 369 174 7 2 319 270 623 5.14e-50 176
Msa0302410 AT4G01780.1 34.557 327 163 6 23 327 169 466 5.58e-47 165
Msa0302410 AT3G48670.2 33.058 363 174 6 17 327 296 641 1.57e-46 167
Msa0302410 AT3G48670.1 33.058 363 174 6 17 327 296 641 1.57e-46 167
Msa0302410 AT3G48670.3 33.058 363 174 6 17 327 296 641 1.57e-46 167
Msa0302410 AT1G80790.1 35.150 367 174 7 11 327 278 630 1.25e-40 150
Msa0302410 AT1G80790.2 35.150 367 174 7 11 327 278 630 1.25e-40 150
Msa0302410 AT3G29375.3 41.624 197 95 3 131 327 47 223 2.86e-39 139
Msa0302410 AT3G29375.1 41.624 197 95 3 131 327 170 346 6.13e-37 136
Msa0302410 AT5G59390.1 35.857 251 127 6 87 316 302 539 8.47e-33 128
Msa0302410 AT5G59390.5 35.857 251 127 6 87 316 302 539 8.47e-33 128
Msa0302410 AT5G59390.2 36.214 243 121 6 95 316 305 534 3.72e-32 126
Msa0302410 AT5G59390.4 36.214 243 121 6 95 316 305 534 3.72e-32 126
Msa0302410 AT5G59390.3 36.214 243 121 6 95 316 305 534 3.72e-32 126
Msa0302410 AT3G12550.3 33.448 290 125 8 9 247 281 553 3.76e-28 115
Msa0302410 AT4G01180.1 29.825 342 160 9 31 314 213 532 1.32e-26 110
Msa0302410 AT3G29375.2 37.607 117 54 2 131 247 47 144 1.69e-13 68.2
Msa0302410 AT2G16490.1 40.278 72 43 0 256 327 74 145 9.63e-12 63.2

Find 75 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGCTTGAACAGTTTATTA+AGG 0.233568 2_3:-59160306 Msa0302410:CDS
ATGGCTCGAGGAGCCTTCTT+TGG 0.276297 2_3:+59158910 None:intergenic
GCAGGTTGAACGCGATTATC+TGG 0.288294 2_3:-59160048 Msa0302410:CDS
AAGTTTATTGAGGCTTCATT+TGG 0.356103 2_3:-59158210 Msa0302410:three_prime_UTR
TCCTGAAAATTCCAGAGTTC+CGG 0.361999 2_3:+59158304 None:intergenic
ACGAGGCTAATGTGTTTCTA+AGG 0.365125 2_3:-59160352 Msa0302410:CDS
AACGGCAAGAGGAGCTTTCC+AGG 0.367759 2_3:-59159216 Msa0302410:intron
AAAGCTGAAGACCATGGAAT+TGG 0.378143 2_3:-59160396 None:intergenic
TGGCTCGAGGAGCCTTCTTT+GGG 0.396617 2_3:+59158911 None:intergenic
TTTCCTTGTTCGCAGTGGAT+TGG 0.397924 2_3:-59158937 Msa0302410:intron
TTCATCAGAAAACTTTCTCT+TGG 0.404556 2_3:+59158834 None:intergenic
ATGCTTGAACAGTTTATTAA+GGG 0.412863 2_3:-59160305 Msa0302410:intron
AAATTCCAGAGTTCCGGTAT+TGG 0.414932 2_3:+59158310 None:intergenic
AGGAAGGAAGGCTTTGTTGA+AGG 0.423776 2_3:-59158281 Msa0302410:CDS
AACTTTGAACGGATGCCAGC+TGG 0.431621 2_3:+59158714 None:intergenic
GGCGGTAAGAACATAGAATC+AGG 0.436061 2_3:-59158188 Msa0302410:three_prime_UTR
ATTCTAGCTCCAACAGACTT+TGG 0.439227 2_3:-59158130 Msa0302410:three_prime_UTR
TCAACTTATGTCACGTGAAA+AGG 0.439309 2_3:-59159970 Msa0302410:CDS
TAATAAATGGAAAGCAAGAA+AGG 0.448416 2_3:-59158239 Msa0302410:CDS
AGAAGAGGAATTGGAGGTCG+TGG 0.450522 2_3:-59159117 Msa0302410:CDS
TGAAAAGCTGAAAAGTTTGA+AGG 0.453713 2_3:-59158413 Msa0302410:CDS
TTGCATCAAGTCCTCTCTCC+AGG 0.454987 2_3:+59159263 None:intergenic
AGGAAGGCTTTGTTGAAGGA+AGG 0.462438 2_3:-59158277 Msa0302410:CDS
GAAGGATGAGGTCGGGGAAG+AGG 0.469590 2_3:-59158395 Msa0302410:CDS
AGTTTATTGAGGCTTCATTT+GGG 0.471329 2_3:-59158209 Msa0302410:three_prime_UTR
AGCAATCAGAATGGAGCTGC+AGG 0.472823 2_3:-59159144 Msa0302410:intron
GAGCCATAATTTCTGTGAAA+AGG 0.480154 2_3:-59158894 Msa0302410:CDS
AAAGTTTGAAGGATGAGGTC+GGG 0.485678 2_3:-59158402 Msa0302410:CDS
AAGGGATAGAAAGTTTATTG+AGG 0.490453 2_3:-59158220 Msa0302410:exon
TGCAGTAGCTACGGCTCTGA+TGG 0.505411 2_3:-59158365 Msa0302410:CDS
GGTATCCAATACCGGAACTC+TGG 0.505524 2_3:-59158315 Msa0302410:CDS
CATAATTTCTGTGAAAAGGA+TGG 0.509342 2_3:-59158890 Msa0302410:CDS
TGCAAAACAAGCATTGGAGT+TGG 0.517554 2_3:-59159245 Msa0302410:CDS
TTATCAGTCACAACTTTGAA+CGG 0.523508 2_3:+59158703 None:intergenic
AATAAATGGAAAGCAAGAAA+GGG 0.523906 2_3:-59158238 Msa0302410:CDS
ACTTGATGCAAAACAAGCAT+TGG 0.532788 2_3:-59159251 Msa0302410:CDS
GCTGAAAAGTTTGAAGGATG+AGG 0.539604 2_3:-59158407 Msa0302410:CDS
GGCGCATGATGCAGTAGCTA+CGG 0.542608 2_3:-59158374 Msa0302410:CDS
AAGTTTGAAGGATGAGGTCG+GGG 0.545446 2_3:-59158401 Msa0302410:CDS
TATTGTATGATCCAATTCCA+TGG 0.546849 2_3:+59160385 None:intergenic
TCAATCATATTGCCAATGGC+TGG 0.551744 2_3:-59158101 Msa0302410:three_prime_UTR
AGAAATCAGCAAGATGCAGC+AGG 0.552419 2_3:-59160066 Msa0302410:CDS
CAATCGAGCGGCGCTCAAAG+TGG 0.555424 2_3:-59158756 Msa0302410:CDS
TTCACAGAAATTATGGCTCG+AGG 0.555555 2_3:+59158898 None:intergenic
GTGGATTGGATGCCCAAAGA+AGG 0.556146 2_3:-59158923 Msa0302410:CDS
TGTGTTTCTAAGGAAAGTGA+TGG 0.557838 2_3:-59160342 Msa0302410:CDS
CATTGGAGTTGGAAATTGAA+CGG 0.558255 2_3:-59159234 Msa0302410:CDS
GCTTATCTATATATATATGA+AGG 0.559890 2_3:-59158166 Msa0302410:three_prime_UTR
CCGAGCTTCTAGTTGAAGCA+TGG 0.561581 2_3:+59159998 None:intergenic
AATCGAGCGGCGCTCAAAGT+GGG 0.563677 2_3:-59158755 Msa0302410:CDS
TAGTGGTAGGTATCCAATAC+CGG 0.565890 2_3:-59158323 Msa0302410:CDS
ATAATTTCTGTGAAAAGGAT+GGG 0.567235 2_3:-59158889 Msa0302410:CDS
CCATGCTTCAACTAGAAGCT+CGG 0.577303 2_3:-59159998 Msa0302410:CDS
ACTTTGAACGGATGCCAGCT+GGG 0.580923 2_3:+59158715 None:intergenic
AAGTTGTGACTGATAAAGAC+GGG 0.585830 2_3:-59158696 Msa0302410:CDS
ACGTGAAAAGGATCTGCAGA+AGG 0.585962 2_3:-59159958 Msa0302410:CDS
AAAAGTTTGAAGGATGAGGT+CGG 0.585975 2_3:-59158403 Msa0302410:CDS
TGAGTTGTACCAAAGTCTGT+TGG 0.586602 2_3:+59158121 None:intergenic
ATAGTATCACCACCAGCCAT+TGG 0.590312 2_3:+59158089 None:intergenic
AAAATTCATGACCTGGAGAG+AGG 0.594735 2_3:-59159274 Msa0302410:CDS
CAACTCAATCATATTGCCAA+TGG 0.601421 2_3:-59158105 Msa0302410:three_prime_UTR
TGATAAAGACGGGAAATCCA+TGG 0.602731 2_3:-59158686 Msa0302410:intron
ACTGTCTTAAAGATCCCAGC+TGG 0.606195 2_3:-59158729 Msa0302410:CDS
ATGAGTACAATCCTAGTGGT+AGG 0.608028 2_3:-59158336 Msa0302410:CDS
AAAGTTGTGACTGATAAAGA+CGG 0.614387 2_3:-59158697 Msa0302410:CDS
GGAAGATCTTCAACAAACAC+TGG 0.622373 2_3:-59159096 Msa0302410:CDS
GGTATTGGATACCTACCACT+AGG 0.628470 2_3:+59158325 None:intergenic
GTTGGAAATTGAACGGCAAG+AGG 0.628840 2_3:-59159227 Msa0302410:CDS
GGCAATTGAAAGCAATCGAG+CGG 0.632176 2_3:-59158768 Msa0302410:CDS
CGTGAAAAGGATCTGCAGAA+GGG 0.641471 2_3:-59159957 Msa0302410:CDS
ATCATATTGCCAATGGCTGG+TGG 0.666389 2_3:-59158098 Msa0302410:three_prime_UTR
TTAAATGAGTACAATCCTAG+TGG 0.688336 2_3:-59158340 Msa0302410:CDS
TACAATAAGCAAATATAACG+AGG 0.690296 2_3:-59160369 Msa0302410:CDS
TTATTGAGGCTTCATTTGGG+CGG 0.690646 2_3:-59158206 Msa0302410:three_prime_UTR
TGCTTCAACTAGAAGCTCGG+AGG 0.697392 2_3:-59159995 Msa0302410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTACATATATTCTTT+CGG - chr2_3:59158217-59158236 Msa0302410:exon 10.0%
!!! TTTTGCATTTAATTAATAAA+TGG - chr2_3:59160160-59160179 Msa0302410:intron 10.0%
!! TATTATTACATATATTCTTT+CGG - chr2_3:59158217-59158236 Msa0302410:exon 10.0%
!!! TTTTGCATTTAATTAATAAA+TGG - chr2_3:59160160-59160179 Msa0302410:intron 10.0%
!! GCTATATATATAATTGATAT+TGG - chr2_3:59158153-59158172 Msa0302410:three_prime_UTR 15.0%
!!! TCTTACTTTTTTATATTTCA+TGG - chr2_3:59158294-59158313 Msa0302410:CDS 15.0%
!! TTAAAAAAACTCTAGATAAA+AGG + chr2_3:59159039-59159058 None:intergenic 15.0%
!! AACTTTAACAATATTAATTC+TGG + chr2_3:59159762-59159781 None:intergenic 15.0%
!! GCTATATATATAATTGATAT+TGG - chr2_3:59158153-59158172 Msa0302410:three_prime_UTR 15.0%
!!! TCTTACTTTTTTATATTTCA+TGG - chr2_3:59158294-59158313 Msa0302410:CDS 15.0%
!! TTAAAAAAACTCTAGATAAA+AGG + chr2_3:59159039-59159058 None:intergenic 15.0%
!! AACTTTAACAATATTAATTC+TGG + chr2_3:59159762-59159781 None:intergenic 15.0%
!!! TTTTTAACACTTTTTCTGAT+AGG - chr2_3:59158587-59158606 Msa0302410:intron 20.0%
!! ATCAATTTACAGAACTAAAT+CGG - chr2_3:59158646-59158665 Msa0302410:intron 20.0%
!! CCAAAGTTATTAAAATAAGA+GGG + chr2_3:59158888-59158907 None:intergenic 20.0%
!! TCCAAAGTTATTAAAATAAG+AGG + chr2_3:59158889-59158908 None:intergenic 20.0%
!!! CTTATTTTAATAACTTTGGA+AGG - chr2_3:59158889-59158908 Msa0302410:CDS 20.0%
!! TCTAGATGATAAGAAAAAAT+TGG - chr2_3:59159244-59159263 Msa0302410:CDS 20.0%
!!! ATACACTGATTAATTTTTTG+CGG + chr2_3:59159382-59159401 None:intergenic 20.0%
!! TTCATAATAATTACAAAGCA+TGG - chr2_3:59159826-59159845 Msa0302410:intron 20.0%
!! TCATAATAATTACAAAGCAT+GGG - chr2_3:59159827-59159846 Msa0302410:intron 20.0%
!! ATGTAACATATATTAGATCA+CGG + chr2_3:59159948-59159967 None:intergenic 20.0%
!! GCTTATCTATATATATATGA+AGG - chr2_3:59160246-59160265 Msa0302410:intron 20.0%
!!! TTTTTAACACTTTTTCTGAT+AGG - chr2_3:59158587-59158606 Msa0302410:intron 20.0%
!! ATCAATTTACAGAACTAAAT+CGG - chr2_3:59158646-59158665 Msa0302410:intron 20.0%
!! CCAAAGTTATTAAAATAAGA+GGG + chr2_3:59158888-59158907 None:intergenic 20.0%
!! TCCAAAGTTATTAAAATAAG+AGG + chr2_3:59158889-59158908 None:intergenic 20.0%
!!! CTTATTTTAATAACTTTGGA+AGG - chr2_3:59158889-59158908 Msa0302410:CDS 20.0%
!! TCTAGATGATAAGAAAAAAT+TGG - chr2_3:59159244-59159263 Msa0302410:CDS 20.0%
!!! ATACACTGATTAATTTTTTG+CGG + chr2_3:59159382-59159401 None:intergenic 20.0%
!! TTCATAATAATTACAAAGCA+TGG - chr2_3:59159826-59159845 Msa0302410:intron 20.0%
!! TCATAATAATTACAAAGCAT+GGG - chr2_3:59159827-59159846 Msa0302410:intron 20.0%
!! ATGTAACATATATTAGATCA+CGG + chr2_3:59159948-59159967 None:intergenic 20.0%
!! GCTTATCTATATATATATGA+AGG - chr2_3:59160246-59160265 Msa0302410:intron 20.0%
! TACAATAAGCAAATATAACG+AGG - chr2_3:59158043-59158062 Msa0302410:three_prime_UTR 25.0%
! ATGCTTGAACAGTTTATTAA+GGG - chr2_3:59158107-59158126 Msa0302410:three_prime_UTR 25.0%
!!! ATTCCTTTTCATTGATTTAG+AGG - chr2_3:59158177-59158196 Msa0302410:three_prime_UTR 25.0%
! AAGAGCTAAAAGAAATTACA+TGG + chr2_3:59158529-59158548 None:intergenic 25.0%
!!! TGTAATTTCTTTTAGCTCTT+TGG - chr2_3:59158529-59158548 Msa0302410:intron 25.0%
! AAAGTTAGCTAAAAGAATGA+GGG + chr2_3:59158777-59158796 None:intergenic 25.0%
! AAAAGTTAGCTAAAAGAATG+AGG + chr2_3:59158778-59158797 None:intergenic 25.0%
! GTTATTAAAATAAGAGGGAT+TGG + chr2_3:59158883-59158902 None:intergenic 25.0%
!!! CCCTCTTATTTTAATAACTT+TGG - chr2_3:59158885-59158904 Msa0302410:CDS 25.0%
!!! CAAATGCATCATTTTTTCAT+CGG + chr2_3:59158985-59159004 None:intergenic 25.0%
!!! TACACTGATTAATTTTTTGC+GGG + chr2_3:59159381-59159400 None:intergenic 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG - chr2_3:59159523-59159542 Msa0302410:intron 25.0%
! TAATAAATGGAAAGCAAGAA+AGG - chr2_3:59160173-59160192 Msa0302410:intron 25.0%
! AATAAATGGAAAGCAAGAAA+GGG - chr2_3:59160174-59160193 Msa0302410:intron 25.0%
! TACAATAAGCAAATATAACG+AGG - chr2_3:59158043-59158062 Msa0302410:three_prime_UTR 25.0%
! ATGCTTGAACAGTTTATTAA+GGG - chr2_3:59158107-59158126 Msa0302410:three_prime_UTR 25.0%
!!! ATTCCTTTTCATTGATTTAG+AGG - chr2_3:59158177-59158196 Msa0302410:three_prime_UTR 25.0%
! AAGAGCTAAAAGAAATTACA+TGG + chr2_3:59158529-59158548 None:intergenic 25.0%
!!! TGTAATTTCTTTTAGCTCTT+TGG - chr2_3:59158529-59158548 Msa0302410:intron 25.0%
! AAAGTTAGCTAAAAGAATGA+GGG + chr2_3:59158777-59158796 None:intergenic 25.0%
! AAAAGTTAGCTAAAAGAATG+AGG + chr2_3:59158778-59158797 None:intergenic 25.0%
! GTTATTAAAATAAGAGGGAT+TGG + chr2_3:59158883-59158902 None:intergenic 25.0%
!!! CCCTCTTATTTTAATAACTT+TGG - chr2_3:59158885-59158904 Msa0302410:CDS 25.0%
!!! CAAATGCATCATTTTTTCAT+CGG + chr2_3:59158985-59159004 None:intergenic 25.0%
!!! TACACTGATTAATTTTTTGC+GGG + chr2_3:59159381-59159400 None:intergenic 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG - chr2_3:59159523-59159542 Msa0302410:intron 25.0%
! TAATAAATGGAAAGCAAGAA+AGG - chr2_3:59160173-59160192 Msa0302410:intron 25.0%
! AATAAATGGAAAGCAAGAAA+GGG - chr2_3:59160174-59160193 Msa0302410:intron 25.0%
GATGCTTGAACAGTTTATTA+AGG - chr2_3:59158106-59158125 Msa0302410:three_prime_UTR 30.0%
!!! CTTTTAGCTCTTTGGATTTA+TGG - chr2_3:59158537-59158556 Msa0302410:intron 30.0%
! TAAATCGGCTTCTTTAAAAG+TGG - chr2_3:59158661-59158680 Msa0302410:intron 30.0%
!! CAAACAACACTTTTTGTGAT+TGG + chr2_3:59158688-59158707 None:intergenic 30.0%
!! CAATCACAAAAAGTGTTGTT+TGG - chr2_3:59158686-59158705 Msa0302410:intron 30.0%
! CTAACAATGTTAAATGGACT+TGG + chr2_3:59158811-59158830 None:intergenic 30.0%
GGAATGCTAACAATGTTAAA+TGG + chr2_3:59158817-59158836 None:intergenic 30.0%
ACTGAATGGTCTATAGATTA+GGG + chr2_3:59158838-59158857 None:intergenic 30.0%
ATTTGACACAAAAGACTGAA+TGG + chr2_3:59158852-59158871 None:intergenic 30.0%
CGATGAAAAAATGATGCATT+TGG - chr2_3:59158983-59159002 Msa0302410:intron 30.0%
!!! TCAAGTTTTGAGGACTATTT+TGG - chr2_3:59159078-59159097 Msa0302410:CDS 30.0%
TCACAAAAAAATTCATGACC+TGG - chr2_3:59159131-59159150 Msa0302410:CDS 30.0%
AAAATTGGAAGCAATCAGAA+TGG - chr2_3:59159259-59159278 Msa0302410:CDS 30.0%
! CATCCTTTTCACAGAAATTA+TGG + chr2_3:59159524-59159543 None:intergenic 30.0%
CATAATTTCTGTGAAAAGGA+TGG - chr2_3:59159522-59159541 Msa0302410:intron 30.0%
!! ACTTGAGATTAAGCCATTTT+TGG - chr2_3:59159549-59159568 Msa0302410:intron 30.0%
TTCATCAGAAAACTTTCTCT+TGG + chr2_3:59159581-59159600 None:intergenic 30.0%
GAATGAGAAAAAAGCAACTA+AGG - chr2_3:59159603-59159622 Msa0302410:intron 30.0%
TTATCAGTCACAACTTTGAA+CGG + chr2_3:59159712-59159731 None:intergenic 30.0%
AAAGTTGTGACTGATAAAGA+CGG - chr2_3:59159715-59159734 Msa0302410:intron 30.0%
ATATGTTACATATATCACGC+AGG - chr2_3:59159957-59159976 Msa0302410:CDS 30.0%
TGAAAAGCTGAAAAGTTTGA+AGG - chr2_3:59159999-59160018 Msa0302410:CDS 30.0%
TTAAATGAGTACAATCCTAG+TGG - chr2_3:59160072-59160091 Msa0302410:intron 30.0%
AAGGGATAGAAAGTTTATTG+AGG - chr2_3:59160192-59160211 Msa0302410:intron 30.0%
AAGTTTATTGAGGCTTCATT+TGG - chr2_3:59160202-59160221 Msa0302410:intron 30.0%
AGTTTATTGAGGCTTCATTT+GGG - chr2_3:59160203-59160222 Msa0302410:intron 30.0%
GATGCTTGAACAGTTTATTA+AGG - chr2_3:59158106-59158125 Msa0302410:three_prime_UTR 30.0%
!!! CTTTTAGCTCTTTGGATTTA+TGG - chr2_3:59158537-59158556 Msa0302410:intron 30.0%
! TAAATCGGCTTCTTTAAAAG+TGG - chr2_3:59158661-59158680 Msa0302410:intron 30.0%
!! CAAACAACACTTTTTGTGAT+TGG + chr2_3:59158688-59158707 None:intergenic 30.0%
!! CAATCACAAAAAGTGTTGTT+TGG - chr2_3:59158686-59158705 Msa0302410:intron 30.0%
! CTAACAATGTTAAATGGACT+TGG + chr2_3:59158811-59158830 None:intergenic 30.0%
GGAATGCTAACAATGTTAAA+TGG + chr2_3:59158817-59158836 None:intergenic 30.0%
ACTGAATGGTCTATAGATTA+GGG + chr2_3:59158838-59158857 None:intergenic 30.0%
ATTTGACACAAAAGACTGAA+TGG + chr2_3:59158852-59158871 None:intergenic 30.0%
CGATGAAAAAATGATGCATT+TGG - chr2_3:59158983-59159002 Msa0302410:intron 30.0%
!!! TCAAGTTTTGAGGACTATTT+TGG - chr2_3:59159078-59159097 Msa0302410:CDS 30.0%
TCACAAAAAAATTCATGACC+TGG - chr2_3:59159131-59159150 Msa0302410:CDS 30.0%
AAAATTGGAAGCAATCAGAA+TGG - chr2_3:59159259-59159278 Msa0302410:CDS 30.0%
! CATCCTTTTCACAGAAATTA+TGG + chr2_3:59159524-59159543 None:intergenic 30.0%
CATAATTTCTGTGAAAAGGA+TGG - chr2_3:59159522-59159541 Msa0302410:intron 30.0%
!! ACTTGAGATTAAGCCATTTT+TGG - chr2_3:59159549-59159568 Msa0302410:intron 30.0%
TTCATCAGAAAACTTTCTCT+TGG + chr2_3:59159581-59159600 None:intergenic 30.0%
GAATGAGAAAAAAGCAACTA+AGG - chr2_3:59159603-59159622 Msa0302410:intron 30.0%
TTATCAGTCACAACTTTGAA+CGG + chr2_3:59159712-59159731 None:intergenic 30.0%
AAAGTTGTGACTGATAAAGA+CGG - chr2_3:59159715-59159734 Msa0302410:intron 30.0%
ATATGTTACATATATCACGC+AGG - chr2_3:59159957-59159976 Msa0302410:CDS 30.0%
TGAAAAGCTGAAAAGTTTGA+AGG - chr2_3:59159999-59160018 Msa0302410:CDS 30.0%
TTAAATGAGTACAATCCTAG+TGG - chr2_3:59160072-59160091 Msa0302410:intron 30.0%
AAGGGATAGAAAGTTTATTG+AGG - chr2_3:59160192-59160211 Msa0302410:intron 30.0%
AAGTTTATTGAGGCTTCATT+TGG - chr2_3:59160202-59160221 Msa0302410:intron 30.0%
AGTTTATTGAGGCTTCATTT+GGG - chr2_3:59160203-59160222 Msa0302410:intron 30.0%
! TGTGTTTCTAAGGAAAGTGA+TGG - chr2_3:59158070-59158089 Msa0302410:three_prime_UTR 35.0%
!! GAAAGTGATGGATCAAAAAG+AGG - chr2_3:59158082-59158101 Msa0302410:three_prime_UTR 35.0%
TCGCCTCTAAATCAATGAAA+AGG + chr2_3:59158183-59158202 None:intergenic 35.0%
!! TGCATCTTGCTGATTTCTAA+GGG + chr2_3:59158344-59158363 None:intergenic 35.0%
TCAACTTATGTCACGTGAAA+AGG - chr2_3:59158442-59158461 Msa0302410:intron 35.0%
!! AGTGTTGTTTGGAGTTTCTT+AGG - chr2_3:59158697-59158716 Msa0302410:CDS 35.0%
GTTGTGTGTATAAATCTGCT+TGG - chr2_3:59158748-59158767 Msa0302410:CDS 35.0%
GACTGAATGGTCTATAGATT+AGG + chr2_3:59158839-59158858 None:intergenic 35.0%
! TCCTGTTGTTTACAGAATGA+TGG - chr2_3:59158938-59158957 Msa0302410:intron 35.0%
AATAGTCCTCAAAACTTGAG+TGG + chr2_3:59159077-59159096 None:intergenic 35.0%
ACTTGATGCAAAACAAGCAT+TGG - chr2_3:59159161-59159180 Msa0302410:intron 35.0%
CATTGGAGTTGGAAATTGAA+CGG - chr2_3:59159178-59159197 Msa0302410:intron 35.0%
TTCCAGGTAATGAATCACAT+TGG - chr2_3:59159212-59159231 Msa0302410:intron 35.0%
CAACCCAAACAATGAAATCA+AGG + chr2_3:59159443-59159462 None:intergenic 35.0%
GAGCCATAATTTCTGTGAAA+AGG - chr2_3:59159518-59159537 Msa0302410:intron 35.0%
AAGTTGTGACTGATAAAGAC+GGG - chr2_3:59159716-59159735 Msa0302410:intron 35.0%
! ATCACGCAGGAAATTTTAGA+CGG - chr2_3:59159970-59159989 Msa0302410:CDS 35.0%
AAAAGTTTGAAGGATGAGGT+CGG - chr2_3:59160009-59160028 Msa0302410:CDS 35.0%
CAACTCAATCATATTGCCAA+TGG - chr2_3:59160307-59160326 Msa0302410:CDS 35.0%
! TGTGTTTCTAAGGAAAGTGA+TGG - chr2_3:59158070-59158089 Msa0302410:three_prime_UTR 35.0%
!! GAAAGTGATGGATCAAAAAG+AGG - chr2_3:59158082-59158101 Msa0302410:three_prime_UTR 35.0%
TCGCCTCTAAATCAATGAAA+AGG + chr2_3:59158183-59158202 None:intergenic 35.0%
!! TGCATCTTGCTGATTTCTAA+GGG + chr2_3:59158344-59158363 None:intergenic 35.0%
TCAACTTATGTCACGTGAAA+AGG - chr2_3:59158442-59158461 Msa0302410:intron 35.0%
!! AGTGTTGTTTGGAGTTTCTT+AGG - chr2_3:59158697-59158716 Msa0302410:CDS 35.0%
GTTGTGTGTATAAATCTGCT+TGG - chr2_3:59158748-59158767 Msa0302410:CDS 35.0%
GACTGAATGGTCTATAGATT+AGG + chr2_3:59158839-59158858 None:intergenic 35.0%
! TCCTGTTGTTTACAGAATGA+TGG - chr2_3:59158938-59158957 Msa0302410:intron 35.0%
AATAGTCCTCAAAACTTGAG+TGG + chr2_3:59159077-59159096 None:intergenic 35.0%
ACTTGATGCAAAACAAGCAT+TGG - chr2_3:59159161-59159180 Msa0302410:intron 35.0%
CATTGGAGTTGGAAATTGAA+CGG - chr2_3:59159178-59159197 Msa0302410:intron 35.0%
TTCCAGGTAATGAATCACAT+TGG - chr2_3:59159212-59159231 Msa0302410:intron 35.0%
CAACCCAAACAATGAAATCA+AGG + chr2_3:59159443-59159462 None:intergenic 35.0%
GAGCCATAATTTCTGTGAAA+AGG - chr2_3:59159518-59159537 Msa0302410:intron 35.0%
AAGTTGTGACTGATAAAGAC+GGG - chr2_3:59159716-59159735 Msa0302410:intron 35.0%
! ATCACGCAGGAAATTTTAGA+CGG - chr2_3:59159970-59159989 Msa0302410:CDS 35.0%
AAAAGTTTGAAGGATGAGGT+CGG - chr2_3:59160009-59160028 Msa0302410:CDS 35.0%
CAACTCAATCATATTGCCAA+TGG - chr2_3:59160307-59160326 Msa0302410:CDS 35.0%
! ACGAGGCTAATGTGTTTCTA+AGG - chr2_3:59158060-59158079 Msa0302410:three_prime_UTR 40.0%
GATTTAGAGGCGAAACATTC+TGG - chr2_3:59158190-59158209 Msa0302410:three_prime_UTR 40.0%
!! CTGCATCTTGCTGATTTCTA+AGG + chr2_3:59158345-59158364 None:intergenic 40.0%
GCCATCATTCTGTAAACAAC+AGG + chr2_3:59158942-59158961 None:intergenic 40.0%
! ATGTGTCCACTCAAGTTTTG+AGG - chr2_3:59159068-59159087 Msa0302410:CDS 40.0%
AAAATTCATGACCTGGAGAG+AGG - chr2_3:59159138-59159157 Msa0302410:CDS 40.0%
!! TGCAAAACAAGCATTGGAGT+TGG - chr2_3:59159167-59159186 Msa0302410:intron 40.0%
CTCCAATGTGATTCATTACC+TGG + chr2_3:59159217-59159236 None:intergenic 40.0%
GCAGGAAAAAGAAGAGGAAT+TGG - chr2_3:59159286-59159305 Msa0302410:CDS 40.0%
GGAAAAAGAAGAGGAATTGG+AGG - chr2_3:59159289-59159308 Msa0302410:CDS 40.0%
GGAAGATCTTCAACAAACAC+TGG - chr2_3:59159316-59159335 Msa0302410:intron 40.0%
CGGCCTTGATTTCATTGTTT+GGG - chr2_3:59159437-59159456 Msa0302410:intron 40.0%
! ATTCTTTTCCTTGTTCGCAG+TGG - chr2_3:59159470-59159489 Msa0302410:intron 40.0%
TTCACAGAAATTATGGCTCG+AGG + chr2_3:59159517-59159536 None:intergenic 40.0%
TGATAAAGACGGGAAATCCA+TGG - chr2_3:59159726-59159745 Msa0302410:intron 40.0%
!! ATTCTGGAGTCATTGTACCA+TGG + chr2_3:59159746-59159765 None:intergenic 40.0%
TACAAAGCATGGGATGCTAT+TGG - chr2_3:59159837-59159856 Msa0302410:intron 40.0%
TTTCCCTGATATGAACTGCA+TGG - chr2_3:59159921-59159940 Msa0302410:CDS 40.0%
GCTGAAAAGTTTGAAGGATG+AGG - chr2_3:59160005-59160024 Msa0302410:CDS 40.0%
AAAGTTTGAAGGATGAGGTC+GGG - chr2_3:59160010-59160029 Msa0302410:CDS 40.0%
ATGAGTACAATCCTAGTGGT+AGG - chr2_3:59160076-59160095 Msa0302410:intron 40.0%
TAGTGGTAGGTATCCAATAC+CGG - chr2_3:59160089-59160108 Msa0302410:intron 40.0%
AAATTCCAGAGTTCCGGTAT+TGG + chr2_3:59160105-59160124 None:intergenic 40.0%
TCCTGAAAATTCCAGAGTTC+CGG + chr2_3:59160111-59160130 None:intergenic 40.0%
!!! GAACTCTGGAATTTTCAGGA+AGG - chr2_3:59160111-59160130 Msa0302410:intron 40.0%
!! TCTGGAATTTTCAGGAAGGA+AGG - chr2_3:59160115-59160134 Msa0302410:intron 40.0%
!! GAATTTTCAGGAAGGAAGGA+AGG - chr2_3:59160119-59160138 Msa0302410:intron 40.0%
TTATTGAGGCTTCATTTGGG+CGG - chr2_3:59160206-59160225 Msa0302410:intron 40.0%
!! ATTCTAGCTCCAACAGACTT+TGG - chr2_3:59160282-59160301 Msa0302410:intron 40.0%
TGAGTTGTACCAAAGTCTGT+TGG + chr2_3:59160294-59160313 None:intergenic 40.0%
TCAATCATATTGCCAATGGC+TGG - chr2_3:59160311-59160330 Msa0302410:CDS 40.0%
! ACGAGGCTAATGTGTTTCTA+AGG - chr2_3:59158060-59158079 Msa0302410:three_prime_UTR 40.0%
GATTTAGAGGCGAAACATTC+TGG - chr2_3:59158190-59158209 Msa0302410:three_prime_UTR 40.0%
!! CTGCATCTTGCTGATTTCTA+AGG + chr2_3:59158345-59158364 None:intergenic 40.0%
GCCATCATTCTGTAAACAAC+AGG + chr2_3:59158942-59158961 None:intergenic 40.0%
! ATGTGTCCACTCAAGTTTTG+AGG - chr2_3:59159068-59159087 Msa0302410:CDS 40.0%
AAAATTCATGACCTGGAGAG+AGG - chr2_3:59159138-59159157 Msa0302410:CDS 40.0%
!! TGCAAAACAAGCATTGGAGT+TGG - chr2_3:59159167-59159186 Msa0302410:intron 40.0%
CTCCAATGTGATTCATTACC+TGG + chr2_3:59159217-59159236 None:intergenic 40.0%
GCAGGAAAAAGAAGAGGAAT+TGG - chr2_3:59159286-59159305 Msa0302410:CDS 40.0%
GGAAAAAGAAGAGGAATTGG+AGG - chr2_3:59159289-59159308 Msa0302410:CDS 40.0%
GGAAGATCTTCAACAAACAC+TGG - chr2_3:59159316-59159335 Msa0302410:intron 40.0%
CGGCCTTGATTTCATTGTTT+GGG - chr2_3:59159437-59159456 Msa0302410:intron 40.0%
! ATTCTTTTCCTTGTTCGCAG+TGG - chr2_3:59159470-59159489 Msa0302410:intron 40.0%
TTCACAGAAATTATGGCTCG+AGG + chr2_3:59159517-59159536 None:intergenic 40.0%
TGATAAAGACGGGAAATCCA+TGG - chr2_3:59159726-59159745 Msa0302410:intron 40.0%
!! ATTCTGGAGTCATTGTACCA+TGG + chr2_3:59159746-59159765 None:intergenic 40.0%
TACAAAGCATGGGATGCTAT+TGG - chr2_3:59159837-59159856 Msa0302410:intron 40.0%
TTTCCCTGATATGAACTGCA+TGG - chr2_3:59159921-59159940 Msa0302410:CDS 40.0%
GCTGAAAAGTTTGAAGGATG+AGG - chr2_3:59160005-59160024 Msa0302410:CDS 40.0%
AAAGTTTGAAGGATGAGGTC+GGG - chr2_3:59160010-59160029 Msa0302410:CDS 40.0%
ATGAGTACAATCCTAGTGGT+AGG - chr2_3:59160076-59160095 Msa0302410:intron 40.0%
TAGTGGTAGGTATCCAATAC+CGG - chr2_3:59160089-59160108 Msa0302410:intron 40.0%
AAATTCCAGAGTTCCGGTAT+TGG + chr2_3:59160105-59160124 None:intergenic 40.0%
TCCTGAAAATTCCAGAGTTC+CGG + chr2_3:59160111-59160130 None:intergenic 40.0%
!!! GAACTCTGGAATTTTCAGGA+AGG - chr2_3:59160111-59160130 Msa0302410:intron 40.0%
!! TCTGGAATTTTCAGGAAGGA+AGG - chr2_3:59160115-59160134 Msa0302410:intron 40.0%
!! GAATTTTCAGGAAGGAAGGA+AGG - chr2_3:59160119-59160138 Msa0302410:intron 40.0%
TTATTGAGGCTTCATTTGGG+CGG - chr2_3:59160206-59160225 Msa0302410:intron 40.0%
!! ATTCTAGCTCCAACAGACTT+TGG - chr2_3:59160282-59160301 Msa0302410:intron 40.0%
TGAGTTGTACCAAAGTCTGT+TGG + chr2_3:59160294-59160313 None:intergenic 40.0%
TCAATCATATTGCCAATGGC+TGG - chr2_3:59160311-59160330 Msa0302410:CDS 40.0%
AGAAATCAGCAAGATGCAGC+AGG - chr2_3:59158346-59158365 Msa0302410:CDS 45.0%
CCATGCTTCAACTAGAAGCT+CGG - chr2_3:59158414-59158433 Msa0302410:CDS 45.0%
ACGTGAAAAGGATCTGCAGA+AGG - chr2_3:59158454-59158473 Msa0302410:intron 45.0%
CGTGAAAAGGATCTGCAGAA+GGG - chr2_3:59158455-59158474 Msa0302410:intron 45.0%
! GCATTTGGCTGAAGAGCATA+AGG - chr2_3:59158998-59159017 Msa0302410:intron 45.0%
GTTGGAAATTGAACGGCAAG+AGG - chr2_3:59159185-59159204 Msa0302410:intron 45.0%
!! AGTTTGTTGCTGTTGCCTTG+CGG - chr2_3:59159417-59159436 Msa0302410:intron 45.0%
ACAATGAAATCAAGGCCGCA+AGG + chr2_3:59159435-59159454 None:intergenic 45.0%
GCGGCCTTGATTTCATTGTT+TGG - chr2_3:59159436-59159455 Msa0302410:intron 45.0%
TTTCCTTGTTCGCAGTGGAT+TGG - chr2_3:59159475-59159494 Msa0302410:intron 45.0%
CTCTTGGCTGCTTCCAAAAA+TGG + chr2_3:59159565-59159584 None:intergenic 45.0%
AGGCACAACTTCGCGAAAAA+TGG - chr2_3:59159623-59159642 Msa0302410:intron 45.0%
GGCAATTGAAAGCAATCGAG+CGG - chr2_3:59159644-59159663 Msa0302410:intron 45.0%
ACTGTCTTAAAGATCCCAGC+TGG - chr2_3:59159683-59159702 Msa0302410:intron 45.0%
GGTCCATGCAGTTCATATCA+GGG + chr2_3:59159927-59159946 None:intergenic 45.0%
AAGTTTGAAGGATGAGGTCG+GGG - chr2_3:59160011-59160030 Msa0302410:CDS 45.0%
! GGTATTGGATACCTACCACT+AGG + chr2_3:59160090-59160109 None:intergenic 45.0%
!!! ACCGGAACTCTGGAATTTTC+AGG - chr2_3:59160107-59160126 Msa0302410:intron 45.0%
!! AGGAAGGAAGGCTTTGTTGA+AGG - chr2_3:59160131-59160150 Msa0302410:intron 45.0%
!! AGGAAGGCTTTGTTGAAGGA+AGG - chr2_3:59160135-59160154 Msa0302410:intron 45.0%
GGCGGTAAGAACATAGAATC+AGG - chr2_3:59160224-59160243 Msa0302410:intron 45.0%
ATCATATTGCCAATGGCTGG+TGG - chr2_3:59160314-59160333 Msa0302410:CDS 45.0%
ATAGTATCACCACCAGCCAT+TGG + chr2_3:59160326-59160345 None:intergenic 45.0%
AGAAATCAGCAAGATGCAGC+AGG - chr2_3:59158346-59158365 Msa0302410:CDS 45.0%
CCATGCTTCAACTAGAAGCT+CGG - chr2_3:59158414-59158433 Msa0302410:CDS 45.0%
ACGTGAAAAGGATCTGCAGA+AGG - chr2_3:59158454-59158473 Msa0302410:intron 45.0%
CGTGAAAAGGATCTGCAGAA+GGG - chr2_3:59158455-59158474 Msa0302410:intron 45.0%
! GCATTTGGCTGAAGAGCATA+AGG - chr2_3:59158998-59159017 Msa0302410:intron 45.0%
GTTGGAAATTGAACGGCAAG+AGG - chr2_3:59159185-59159204 Msa0302410:intron 45.0%
!! AGTTTGTTGCTGTTGCCTTG+CGG - chr2_3:59159417-59159436 Msa0302410:intron 45.0%
ACAATGAAATCAAGGCCGCA+AGG + chr2_3:59159435-59159454 None:intergenic 45.0%
GCGGCCTTGATTTCATTGTT+TGG - chr2_3:59159436-59159455 Msa0302410:intron 45.0%
TTTCCTTGTTCGCAGTGGAT+TGG - chr2_3:59159475-59159494 Msa0302410:intron 45.0%
CTCTTGGCTGCTTCCAAAAA+TGG + chr2_3:59159565-59159584 None:intergenic 45.0%
AGGCACAACTTCGCGAAAAA+TGG - chr2_3:59159623-59159642 Msa0302410:intron 45.0%
GGCAATTGAAAGCAATCGAG+CGG - chr2_3:59159644-59159663 Msa0302410:intron 45.0%
ACTGTCTTAAAGATCCCAGC+TGG - chr2_3:59159683-59159702 Msa0302410:intron 45.0%
GGTCCATGCAGTTCATATCA+GGG + chr2_3:59159927-59159946 None:intergenic 45.0%
AAGTTTGAAGGATGAGGTCG+GGG - chr2_3:59160011-59160030 Msa0302410:CDS 45.0%
! GGTATTGGATACCTACCACT+AGG + chr2_3:59160090-59160109 None:intergenic 45.0%
!!! ACCGGAACTCTGGAATTTTC+AGG - chr2_3:59160107-59160126 Msa0302410:intron 45.0%
!! AGGAAGGAAGGCTTTGTTGA+AGG - chr2_3:59160131-59160150 Msa0302410:intron 45.0%
!! AGGAAGGCTTTGTTGAAGGA+AGG - chr2_3:59160135-59160154 Msa0302410:intron 45.0%
GGCGGTAAGAACATAGAATC+AGG - chr2_3:59160224-59160243 Msa0302410:intron 45.0%
ATCATATTGCCAATGGCTGG+TGG - chr2_3:59160314-59160333 Msa0302410:CDS 45.0%
ATAGTATCACCACCAGCCAT+TGG + chr2_3:59160326-59160345 None:intergenic 45.0%
! GCAGGTTGAACGCGATTATC+TGG - chr2_3:59158364-59158383 Msa0302410:CDS 50.0%
! CCGAGCTTCTAGTTGAAGCA+TGG + chr2_3:59158417-59158436 None:intergenic 50.0%
TGCTTCAACTAGAAGCTCGG+AGG - chr2_3:59158417-59158436 Msa0302410:CDS 50.0%
TTAGGAGTCCCACATTGCTC+AGG - chr2_3:59158715-59158734 Msa0302410:CDS 50.0%
TCCCACATTGCTCAGGTTCT+CGG - chr2_3:59158722-59158741 Msa0302410:CDS 50.0%
TTGCATCAAGTCCTCTCTCC+AGG + chr2_3:59159152-59159171 None:intergenic 50.0%
AGCAATCAGAATGGAGCTGC+AGG - chr2_3:59159268-59159287 Msa0302410:CDS 50.0%
GGAGCTGCAGGAAAAAGAAG+AGG - chr2_3:59159280-59159299 Msa0302410:CDS 50.0%
AGAAGAGGAATTGGAGGTCG+TGG - chr2_3:59159295-59159314 Msa0302410:CDS 50.0%
CATCCAATCCACTGCGAACA+AGG + chr2_3:59159481-59159500 None:intergenic 50.0%
!! GTGGATTGGATGCCCAAAGA+AGG - chr2_3:59159489-59159508 Msa0302410:intron 50.0%
ACTTTGAACGGATGCCAGCT+GGG + chr2_3:59159700-59159719 None:intergenic 50.0%
AACTTTGAACGGATGCCAGC+TGG + chr2_3:59159701-59159720 None:intergenic 50.0%
TGCTAGCAGTGGCAAGTTTC+AGG + chr2_3:59159884-59159903 None:intergenic 50.0%
TGCCACTGCTAGCACTTACT+TGG - chr2_3:59159890-59159909 Msa0302410:intron 50.0%
TGCCAAGTAAGTGCTAGCAG+TGG + chr2_3:59159895-59159914 None:intergenic 50.0%
CGGTCCATGCAGTTCATATC+AGG + chr2_3:59159928-59159947 None:intergenic 50.0%
GGTATCCAATACCGGAACTC+TGG - chr2_3:59160097-59160116 Msa0302410:intron 50.0%
! GCAGGTTGAACGCGATTATC+TGG - chr2_3:59158364-59158383 Msa0302410:CDS 50.0%
! CCGAGCTTCTAGTTGAAGCA+TGG + chr2_3:59158417-59158436 None:intergenic 50.0%
TGCTTCAACTAGAAGCTCGG+AGG - chr2_3:59158417-59158436 Msa0302410:CDS 50.0%
TTAGGAGTCCCACATTGCTC+AGG - chr2_3:59158715-59158734 Msa0302410:CDS 50.0%
TCCCACATTGCTCAGGTTCT+CGG - chr2_3:59158722-59158741 Msa0302410:CDS 50.0%
TTGCATCAAGTCCTCTCTCC+AGG + chr2_3:59159152-59159171 None:intergenic 50.0%
AGCAATCAGAATGGAGCTGC+AGG - chr2_3:59159268-59159287 Msa0302410:CDS 50.0%
GGAGCTGCAGGAAAAAGAAG+AGG - chr2_3:59159280-59159299 Msa0302410:CDS 50.0%
AGAAGAGGAATTGGAGGTCG+TGG - chr2_3:59159295-59159314 Msa0302410:CDS 50.0%
CATCCAATCCACTGCGAACA+AGG + chr2_3:59159481-59159500 None:intergenic 50.0%
!! GTGGATTGGATGCCCAAAGA+AGG - chr2_3:59159489-59159508 Msa0302410:intron 50.0%
ACTTTGAACGGATGCCAGCT+GGG + chr2_3:59159700-59159719 None:intergenic 50.0%
AACTTTGAACGGATGCCAGC+TGG + chr2_3:59159701-59159720 None:intergenic 50.0%
TGCTAGCAGTGGCAAGTTTC+AGG + chr2_3:59159884-59159903 None:intergenic 50.0%
TGCCACTGCTAGCACTTACT+TGG - chr2_3:59159890-59159909 Msa0302410:intron 50.0%
TGCCAAGTAAGTGCTAGCAG+TGG + chr2_3:59159895-59159914 None:intergenic 50.0%
CGGTCCATGCAGTTCATATC+AGG + chr2_3:59159928-59159947 None:intergenic 50.0%
GGTATCCAATACCGGAACTC+TGG - chr2_3:59160097-59160116 Msa0302410:intron 50.0%
CCCGAGAACCTGAGCAATGT+GGG + chr2_3:59158726-59158745 None:intergenic 55.0%
CCCACATTGCTCAGGTTCTC+GGG - chr2_3:59158723-59158742 Msa0302410:CDS 55.0%
TCCCGAGAACCTGAGCAATG+TGG + chr2_3:59158727-59158746 None:intergenic 55.0%
AACGGCAAGAGGAGCTTTCC+AGG - chr2_3:59159196-59159215 Msa0302410:intron 55.0%
TGGCTCGAGGAGCCTTCTTT+GGG + chr2_3:59159504-59159523 None:intergenic 55.0%
ATGGCTCGAGGAGCCTTCTT+TGG + chr2_3:59159505-59159524 None:intergenic 55.0%
AATCGAGCGGCGCTCAAAGT+GGG - chr2_3:59159657-59159676 Msa0302410:intron 55.0%
GGCGCATGATGCAGTAGCTA+CGG - chr2_3:59160038-59160057 Msa0302410:CDS 55.0%
! TGCAGTAGCTACGGCTCTGA+TGG - chr2_3:59160047-59160066 Msa0302410:CDS 55.0%
CCCGAGAACCTGAGCAATGT+GGG + chr2_3:59158726-59158745 None:intergenic 55.0%
CCCACATTGCTCAGGTTCTC+GGG - chr2_3:59158723-59158742 Msa0302410:CDS 55.0%
TCCCGAGAACCTGAGCAATG+TGG + chr2_3:59158727-59158746 None:intergenic 55.0%
AACGGCAAGAGGAGCTTTCC+AGG - chr2_3:59159196-59159215 Msa0302410:intron 55.0%
TGGCTCGAGGAGCCTTCTTT+GGG + chr2_3:59159504-59159523 None:intergenic 55.0%
ATGGCTCGAGGAGCCTTCTT+TGG + chr2_3:59159505-59159524 None:intergenic 55.0%
AATCGAGCGGCGCTCAAAGT+GGG - chr2_3:59159657-59159676 Msa0302410:intron 55.0%
GGCGCATGATGCAGTAGCTA+CGG - chr2_3:59160038-59160057 Msa0302410:CDS 55.0%
! TGCAGTAGCTACGGCTCTGA+TGG - chr2_3:59160047-59160066 Msa0302410:CDS 55.0%
CAATCGAGCGGCGCTCAAAG+TGG - chr2_3:59159656-59159675 Msa0302410:intron 60.0%
GAAGGATGAGGTCGGGGAAG+AGG - chr2_3:59160017-59160036 Msa0302410:CDS 60.0%
CAATCGAGCGGCGCTCAAAG+TGG - chr2_3:59159656-59159675 Msa0302410:intron 60.0%
GAAGGATGAGGTCGGGGAAG+AGG - chr2_3:59160017-59160036 Msa0302410:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 59158029 59160405 59158029 ID=Msa0302410;Name=Msa0302410
chr2_3 mRNA 59158029 59160405 59158029 ID=Msa0302410-mRNA-1;Parent=Msa0302410;Name=Msa0302410-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0.4|0.33|1|1|1|6|205|328
chr2_3 exon 59158029 59158455 59158029 ID=Msa0302410-mRNA-1:exon:19143;Parent=Msa0302410-mRNA-1
chr2_3 exon 59158687 59158944 59158687 ID=Msa0302410-mRNA-1:exon:19142;Parent=Msa0302410-mRNA-1
chr2_3 exon 59159037 59159157 59159037 ID=Msa0302410-mRNA-1:exon:19141;Parent=Msa0302410-mRNA-1
chr2_3 exon 59159217 59159320 59159217 ID=Msa0302410-mRNA-1:exon:19140;Parent=Msa0302410-mRNA-1
chr2_3 exon 59159905 59160086 59159905 ID=Msa0302410-mRNA-1:exon:19139;Parent=Msa0302410-mRNA-1
chr2_3 exon 59160306 59160405 59160306 ID=Msa0302410-mRNA-1:exon:19138;Parent=Msa0302410-mRNA-1
chr2_3 CDS 59160306 59160405 59160306 ID=Msa0302410-mRNA-1:cds;Parent=Msa0302410-mRNA-1
chr2_3 CDS 59159905 59160086 59159905 ID=Msa0302410-mRNA-1:cds;Parent=Msa0302410-mRNA-1
chr2_3 CDS 59159217 59159320 59159217 ID=Msa0302410-mRNA-1:cds;Parent=Msa0302410-mRNA-1
chr2_3 CDS 59159037 59159157 59159037 ID=Msa0302410-mRNA-1:cds;Parent=Msa0302410-mRNA-1
chr2_3 CDS 59158687 59158944 59158687 ID=Msa0302410-mRNA-1:cds;Parent=Msa0302410-mRNA-1
chr2_3 CDS 59158234 59158455 59158234 ID=Msa0302410-mRNA-1:cds;Parent=Msa0302410-mRNA-1
chr2_3 three_prime_UTR 59158029 59158233 59158029 ID=Msa0302410-mRNA-1:three_prime_utr;Parent=Msa0302410-mRNA-1
Gene Sequence

>Msa0302410

ATGGAATTGGATCATACAATAAGCAAATATAACGAGGCTAATGTGTTTCTAAGGAAAGTGATGGATCAAAAAGAGGAGATGCTTGAACAGTTTATTAAGGAAATCAGCAAGATGCAGCAGGTTGAACGCGATTATCTGGAGAGCATGTCGAAGAATTATGAAAAAGCCATGCTTCAACTAGAAGCTCGGAGGAATCAACTTATGTCACGTGAAAAGGATCTGCAGAAGGGTCAAGAAGATAATTACATCGAGAGAAATAAGCAATATTTTCAGACGAGCCATAAAGAAAAAGAGAAACTTCACAAAAAAATTCATGACCTGGAGAGAGGACTTGATGCAAAACAAGCATTGGAGTTGGAAATTGAACGGCAAGAGGAGCTTTCCAGAATGGAGCTGCAGGAAAAAGAAGAGGAATTGGAGGTCGTGGAAGATCTTCAACAAACACTGGTTGTTCAAGAGCGCAAAACTAATGACGAGTTGCAAGATGCCCGCAAAAAATTAATCAGTTGGATTGGATGCCCAAAGAAGGCTCCTCGAGCCATAATTTCTGTGAAAAGGATGGGCGAACTTGAGATTAAGCCATTTTTGGAAGCAGCCAAGAGAAAGTTTTCTGATGAAGTGAATGAGAAAAAAGCAACTAAGGCACAACTTCGCGAAAAATGGCAATTGAAAGCAATCGAGCGGCGCTCAAAGTGGGATGACTGTCTTAAAGATCCCAGCTGGCATCCGTTCAAAGTTGTGACTGATAAAGACGGGAAATCCATGGAAATTTTAGACGGAGAAGATGAAAAGCTGAAAAGTTTGAAGGATGAGGTCGGGGAAGAGGCGCATGATGCAGTAGCTACGGCTCTGATGGAGTTAAATGAGTACAATCCTAGTGGTAGGTATCCAATACCGGAACTCTGGAATTTTCAGGAAGGAAGGAAGGCTTTGTTGAAGGAAGGTGTTTTGCATTTAATTAATAAATGGAAAGCAAGAAAGGGATAG
Protein sequence

>Msa0302410

MELDHTISKYNEANVFLRKVMDQKEEMLEQFIKEISKMQQVERDYLESMSKNYEKAMLQLEARRNQLMSREKDLQKGQEDNYIERNKQYFQTSHKEKEKLHKKIHDLERGLDAKQALELEIERQEELSRMELQEKEEELEVVEDLQQTLVVQERKTNDELQDARKKLISWIGCPKKAPRAIISVKRMGELEIKPFLEAAKRKFSDEVNEKKATKAQLREKWQLKAIERRSKWDDCLKDPSWHPFKVVTDKDGKSMEILDGEDEKLKSLKDEVGEEAHDAVATALMELNEYNPSGRYPIPELWNFQEGRKALLKEGVLHLINKWKARKG*