Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302920 | AES67744.1 | 99.133 | 346 | 3 | 0 | 1 | 346 | 17 | 362 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302920 | sp|Q2KIJ2|MET18_BOVIN | 33.083 | 133 | 81 | 3 | 75 | 203 | 155 | 283 | 3.32e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302920 | G7IHS1 | 99.133 | 346 | 3 | 0 | 1 | 346 | 17 | 362 | 0.0 | 709 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0302920 | Msa0717920 | 0.806382 | 8.450793e-50 | -8.615850e-47 |
| Msa0302920 | Msa1224670 | -0.810410 | 1.168849e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302920 | MtrunA17_Chr2g0329251 | 99.133 | 346 | 3 | 0 | 1 | 346 | 1 | 346 | 0.0 | 709 |
| Msa0302920 | MtrunA17_Chr7g0215941 | 34.675 | 323 | 137 | 9 | 37 | 346 | 50 | 311 | 7.26e-52 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302920 | AT2G43320.1 | 67.232 | 354 | 105 | 6 | 1 | 346 | 1 | 351 | 6.49e-170 | 477 |
| Msa0302920 | AT2G43320.2 | 67.232 | 354 | 105 | 6 | 1 | 346 | 1 | 351 | 6.49e-170 | 477 |
| Msa0302920 | AT4G14000.1 | 33.758 | 314 | 139 | 5 | 38 | 346 | 41 | 290 | 8.94e-50 | 168 |
Find 100 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAACTGGACCAGGATTT+TGG | 0.176468 | 2_3:-59935109 | None:intergenic |
| TTCAAAGAGTTAACAGAGTA+TGG | 0.230271 | 2_3:-59936416 | None:intergenic |
| TCGATGAGTGATTGAGATTA+AGG | 0.313298 | 2_3:+59937585 | Msa0302920:three_prime_UTR |
| ATTGGAATTGTAAATCAAAA+TGG | 0.337142 | 2_3:+59937426 | Msa0302920:three_prime_UTR |
| TTGGATAAGAAACTCAATAT+TGG | 0.338601 | 2_3:+59937408 | Msa0302920:three_prime_UTR |
| ATTCAGAGAGAGTTAGGTTT+TGG | 0.338623 | 2_3:-59932562 | None:intergenic |
| ACCTAACTCTCTCTGAATTC+AGG | 0.349207 | 2_3:+59932567 | Msa0302920:five_prime_UTR |
| TGATTGAGATTAAGGTAAAA+TGG | 0.351667 | 2_3:+59937593 | Msa0302920:three_prime_UTR |
| AAGAGCTAATGAGGCAGATC+AGG | 0.351711 | 2_3:+59936355 | Msa0302920:CDS |
| ACCTGAATTCAGAGAGAGTT+AGG | 0.362655 | 2_3:-59932568 | None:intergenic |
| AGTGCATTTGGTTAAGGATT+TGG | 0.364694 | 2_3:+59937131 | Msa0302920:CDS |
| GTGCAGCTCAGTTGCAACTA+TGG | 0.367887 | 2_3:+59935423 | Msa0302920:intron |
| GGTCGATCAACCACTGGATT+AGG | 0.368562 | 2_3:-59937528 | None:intergenic |
| ATTGTTTATAAAAGAGAAAA+AGG | 0.384476 | 2_3:+59937562 | Msa0302920:three_prime_UTR |
| TGGAATCTTTGCTTGCTTGA+AGG | 0.385742 | 2_3:+59935452 | Msa0302920:CDS |
| TGCTGAAACGTACCTTAAAA+TGG | 0.388735 | 2_3:-59934053 | None:intergenic |
| AAGCATTGTGAAAGTATTGC+CGG | 0.390945 | 2_3:-59933719 | None:intergenic |
| GTAAGCGTTGCTGATATCAT+AGG | 0.392075 | 2_3:+59934646 | Msa0302920:CDS |
| CCAACATAGTGCTTCTTAGT+TGG | 0.393791 | 2_3:-59937051 | None:intergenic |
| TTCTTATAGCTTAGTAATAA+CGG | 0.393972 | 2_3:+59937305 | Msa0302920:three_prime_UTR |
| AGTTGCAACTATGGACTTCC+TGG | 0.402863 | 2_3:+59935432 | Msa0302920:CDS |
| GAGAAGCTCAAACTCATTCC+AGG | 0.407503 | 2_3:-59936227 | None:intergenic |
| ATTTGGCTGACAGAGATATC+TGG | 0.407805 | 2_3:+59937148 | Msa0302920:CDS |
| AGCCAAGATGGTAGCATCAT+TGG | 0.412480 | 2_3:+59936278 | Msa0302920:CDS |
| AATGGTAGTTGTACCTTTGA+AGG | 0.422490 | 2_3:-59933836 | None:intergenic |
| TGCGAGATGAATAGCTTTCT+CGG | 0.424105 | 2_3:-59933792 | None:intergenic |
| GAGTCTGCCTTGAAGGAGTA+AGG | 0.430875 | 2_3:-59936115 | None:intergenic |
| GGCCTAGTGCCTCGCGATCA+TGG | 0.432544 | 2_3:+59933746 | Msa0302920:CDS |
| GCAAGATATACTACTCCATA+TGG | 0.440913 | 2_3:-59937027 | None:intergenic |
| GGTGCAAGAGTCTGCCTTGA+AGG | 0.442524 | 2_3:-59936122 | None:intergenic |
| TTCAAGCAAGCAAAGATTCC+AGG | 0.447556 | 2_3:-59935450 | None:intergenic |
| ACTGACAAGATCGATGGAAC+TGG | 0.456884 | 2_3:-59935122 | None:intergenic |
| ATACTTTCACAATGCTTGCC+TGG | 0.461266 | 2_3:+59933725 | Msa0302920:CDS |
| AGTCTCCCCTTACTCCTTCA+AGG | 0.467899 | 2_3:+59936108 | Msa0302920:CDS |
| GTTTATCTTATCAGTTCGAC+AGG | 0.468980 | 2_3:+59933662 | Msa0302920:intron |
| TTTCACACTGACAAGGAAGC+TGG | 0.471457 | 2_3:+59934018 | Msa0302920:CDS |
| TGATCGCGAGGCACTAGGCC+AGG | 0.473160 | 2_3:-59933743 | None:intergenic |
| TCGATCTTGTCAGTGTTCTC+AGG | 0.478533 | 2_3:+59935131 | Msa0302920:CDS |
| CACTATGTTGGCTTTAGCAA+TGG | 0.487530 | 2_3:+59937063 | Msa0302920:CDS |
| ATCTCAAGCAAGCTCGTGAT+AGG | 0.490045 | 2_3:+59936069 | Msa0302920:CDS |
| GCTGTATGCTCTCATTAAGA+AGG | 0.490565 | 2_3:+59936442 | Msa0302920:CDS |
| GTCCAATGATGCTACCATCT+TGG | 0.492533 | 2_3:-59936280 | None:intergenic |
| AATCTAGTTCAAGAAGGTCT+AGG | 0.505401 | 2_3:+59936306 | Msa0302920:CDS |
| GTTGCTGATATCATAGGGTT+CGG | 0.512763 | 2_3:+59934652 | Msa0302920:CDS |
| TTGAGATTACCAAGGACATT+CGG | 0.513103 | 2_3:-59936053 | None:intergenic |
| AGCATTGTGAAAGTATTGCC+GGG | 0.518150 | 2_3:-59933718 | None:intergenic |
| GATGGATATGAAGCGACACC+TGG | 0.521604 | 2_3:+59936209 | Msa0302920:CDS |
| TTCACACTGACAAGGAAGCT+GGG | 0.523575 | 2_3:+59934019 | Msa0302920:CDS |
| CAGTGTATAAGGCCTCCATA+TGG | 0.523925 | 2_3:+59937012 | Msa0302920:intron |
| ATCAACTGCAATGCGTGCCC+CGG | 0.524425 | 2_3:+59933700 | Msa0302920:exon |
| AGAGACAATATCCTCAAGAC+TGG | 0.526398 | 2_3:+59934681 | Msa0302920:CDS |
| AACTCTCAGGAAGTCGAGCA+TGG | 0.526851 | 2_3:+59936330 | Msa0302920:CDS |
| AAGATCGATGGAACTGGACC+AGG | 0.529297 | 2_3:-59935116 | None:intergenic |
| GAAGGAAGAATCTCCACTGC+TGG | 0.530773 | 2_3:-59933818 | None:intergenic |
| TTGTAGGCTATCCAAAATCC+TGG | 0.531728 | 2_3:+59935098 | Msa0302920:intron |
| GAAGGAGTAAGGGGAGACTC+TGG | 0.536647 | 2_3:-59936104 | None:intergenic |
| AGTGGAGATTCTTCCTTCAA+AGG | 0.538231 | 2_3:+59933823 | Msa0302920:CDS |
| ACAAGAATTCAAAGATCAGA+TGG | 0.539641 | 2_3:+59937189 | Msa0302920:three_prime_UTR |
| GCGAGATGAATAGCTTTCTC+GGG | 0.546042 | 2_3:-59933791 | None:intergenic |
| TTATGGGGTCGATCAACCAC+TGG | 0.546807 | 2_3:-59937534 | None:intergenic |
| AGTCTGCCTTGAAGGAGTAA+GGG | 0.548303 | 2_3:-59936114 | None:intergenic |
| ACAACTGTACCGAATGTCCT+TGG | 0.550768 | 2_3:+59936044 | Msa0302920:CDS |
| AGAAGGTCTAGGAAACTCTC+AGG | 0.551273 | 2_3:+59936317 | Msa0302920:CDS |
| GTCTGCCTTGAAGGAGTAAG+GGG | 0.556078 | 2_3:-59936113 | None:intergenic |
| CTCAGGAATGAGATTCGTGA+TGG | 0.559089 | 2_3:+59935148 | Msa0302920:CDS |
| GATGGGCAATTGACCTTCAG+AGG | 0.568466 | 2_3:+59935166 | Msa0302920:CDS |
| GATGTAGGTAGTAGCCAAGA+TGG | 0.572612 | 2_3:+59936266 | Msa0302920:CDS |
| AGAGCTAATGAGGCAGATCA+GGG | 0.576077 | 2_3:+59936356 | Msa0302920:CDS |
| TAAGCGTTGCTGATATCATA+GGG | 0.576434 | 2_3:+59934647 | Msa0302920:CDS |
| CCAACTAAGAAGCACTATGT+TGG | 0.576670 | 2_3:+59937051 | Msa0302920:CDS |
| AGCATGGGAAAGAGCTAATG+AGG | 0.580629 | 2_3:+59936346 | Msa0302920:CDS |
| TTCCATGATCGCGAGGCACT+AGG | 0.581410 | 2_3:-59933748 | None:intergenic |
| ACTCTCAGGAAGTCGAGCAT+GGG | 0.581643 | 2_3:+59936331 | Msa0302920:CDS |
| GAGAAATGTGTTAGATGAGG+AGG | 0.584734 | 2_3:+59937098 | Msa0302920:CDS |
| TCTCTCCTTTCCTAATCCAG+TGG | 0.588964 | 2_3:+59937518 | Msa0302920:three_prime_UTR |
| TCATCTCGCATCACCAGCAG+TGG | 0.589124 | 2_3:+59933805 | Msa0302920:CDS |
| ACAATATCCTCAAGACTGGA+TGG | 0.597780 | 2_3:+59934685 | Msa0302920:CDS |
| AGCTAATGAGGCAGATCAGG+GGG | 0.601274 | 2_3:+59936358 | Msa0302920:CDS |
| GACACGAATCTAGTTCAAGA+AGG | 0.606715 | 2_3:+59936300 | Msa0302920:CDS |
| GGTAAAATGGACAACGTGAG+AGG | 0.607175 | 2_3:+59937606 | Msa0302920:three_prime_UTR |
| ATCAACCACTGGATTAGGAA+AGG | 0.608883 | 2_3:-59937523 | None:intergenic |
| GAGAACACTGACAAGATCGA+TGG | 0.620581 | 2_3:-59935128 | None:intergenic |
| TTCACAGTAGACAACACGCT+AGG | 0.621926 | 2_3:-59936182 | None:intergenic |
| GTACATACCATCCAGTCTTG+AGG | 0.628458 | 2_3:-59934692 | None:intergenic |
| GCTGATATCATAGGGTTCGG+TGG | 0.633196 | 2_3:+59934655 | Msa0302920:CDS |
| GCTGAGAAATGTGTTAGATG+AGG | 0.637065 | 2_3:+59937095 | Msa0302920:CDS |
| AGAAATGTGTTAGATGAGGA+GGG | 0.641023 | 2_3:+59937099 | Msa0302920:CDS |
| TCAGGAATGAGATTCGTGAT+GGG | 0.642794 | 2_3:+59935149 | Msa0302920:CDS |
| CTGATCTTGAAAATGCACAA+TGG | 0.646401 | 2_3:-59936000 | None:intergenic |
| CCAGCATAAAAGTTAACAGA+CGG | 0.654796 | 2_3:-59936143 | None:intergenic |
| CTGAGACTTCCATGATCGCG+AGG | 0.660220 | 2_3:-59933755 | None:intergenic |
| AATGAGTTTGAGCTTCTCTG+AGG | 0.665222 | 2_3:+59936232 | Msa0302920:CDS |
| TCACACTGACAAGGAAGCTG+GGG | 0.671691 | 2_3:+59934020 | Msa0302920:CDS |
| TCAGTGCAAAGCAATCTCAT+CGG | 0.682317 | 2_3:+59937363 | Msa0302920:three_prime_UTR |
| AGATATACTACTCCATATGG+AGG | 0.684240 | 2_3:-59937024 | None:intergenic |
| GCAGGCGTTTCACACTGACA+AGG | 0.685156 | 2_3:+59934011 | Msa0302920:intron |
| GAGCTAATGAGGCAGATCAG+GGG | 0.688813 | 2_3:+59936357 | Msa0302920:CDS |
| TTATAGCTTAGTAATAACGG+AGG | 0.695621 | 2_3:+59937308 | Msa0302920:three_prime_UTR |
| GCATTGTGAAAGTATTGCCG+GGG | 0.703393 | 2_3:-59933717 | None:intergenic |
| GAGCTTGCTTGAGATTACCA+AGG | 0.706867 | 2_3:-59936061 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATTGTTATTGAAAAT+AGG | + | chr2_3:59933255-59933274 | Msa0302920:intron | 10.0% |
| !!! | ATATATTGTTATTGAAAATA+GGG | + | chr2_3:59933256-59933275 | Msa0302920:intron | 10.0% |
| !! | GTCTTTAATTAAATTATTTA+TGG | + | chr2_3:59934130-59934149 | Msa0302920:intron | 10.0% |
| !!! | AATTTTTTTTTTAAGTCTTT+TGG | + | chr2_3:59935860-59935879 | Msa0302920:intron | 10.0% |
| !!! | TATAAACAATTTTTTTTATG+GGG | - | chr2_3:59937552-59937571 | None:intergenic | 10.0% |
| !! | TTCTATGATCATATATAATT+AGG | + | chr2_3:59932658-59932677 | Msa0302920:intron | 15.0% |
| !!! | AACAAAAAGATCAAAATTTT+GGG | - | chr2_3:59932784-59932803 | None:intergenic | 15.0% |
| !!! | AAACAAAAAGATCAAAATTT+TGG | - | chr2_3:59932785-59932804 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTTTCACTATT+AGG | + | chr2_3:59932796-59932815 | Msa0302920:intron | 15.0% |
| !!! | TTTGAACTTTTTTAGAAAAA+GGG | + | chr2_3:59932850-59932869 | Msa0302920:intron | 15.0% |
| !! | GTTAAAAAAATAATTGCAAT+TGG | + | chr2_3:59932976-59932995 | Msa0302920:intron | 15.0% |
| !!! | TATATAGTGTTATTGAAAAT+AGG | + | chr2_3:59933196-59933215 | Msa0302920:intron | 15.0% |
| !!! | ATATAGTGTTATTGAAAATA+GGG | + | chr2_3:59933197-59933216 | Msa0302920:intron | 15.0% |
| !!! | ATTTTATATTATTTTGCCAA+AGG | + | chr2_3:59934375-59934394 | Msa0302920:intron | 15.0% |
| !! | ACTAAAAAGATTGAAAAATA+TGG | - | chr2_3:59935358-59935377 | None:intergenic | 15.0% |
| !! | TCTAATTGAATACAATAAAT+TGG | - | chr2_3:59936737-59936756 | None:intergenic | 15.0% |
| !! | ATTTATTGTATTCAATTAGA+CGG | + | chr2_3:59936737-59936756 | Msa0302920:intron | 15.0% |
| !! | ATTGTTTATAAAAGAGAAAA+AGG | + | chr2_3:59937562-59937581 | Msa0302920:three_prime_UTR | 15.0% |
| !!! | ACAAAAAGATCAAAATTTTG+GGG | - | chr2_3:59932783-59932802 | None:intergenic | 20.0% |
| !!! | GTTTGAACTTTTTTAGAAAA+AGG | + | chr2_3:59932849-59932868 | Msa0302920:intron | 20.0% |
| !!! | ATGTTTTTATTTTATGTGCA+TGG | + | chr2_3:59932898-59932917 | Msa0302920:intron | 20.0% |
| !! | ATCGTACTATTAATTATTCT+CGG | - | chr2_3:59933306-59933325 | None:intergenic | 20.0% |
| !!! | TAAAAACAAATACTTCCTTT+TGG | + | chr2_3:59933340-59933359 | Msa0302920:intron | 20.0% |
| !!! | TAATAAATAGCGAAGTTTTT+AGG | + | chr2_3:59933465-59933484 | Msa0302920:intron | 20.0% |
| !!! | CATTGAATTATTGAACTTTT+GGG | - | chr2_3:59934274-59934293 | None:intergenic | 20.0% |
| !!! | ACATTGAATTATTGAACTTT+TGG | - | chr2_3:59934275-59934294 | None:intergenic | 20.0% |
| !!! | ATTATTTTTCTGACACAAAT+TGG | - | chr2_3:59934954-59934973 | None:intergenic | 20.0% |
| !! | AAAAAGAATCCAAAATCTTT+AGG | - | chr2_3:59935795-59935814 | None:intergenic | 20.0% |
| !!! | AAAGATTTTGGATTCTTTTT+TGG | + | chr2_3:59935795-59935814 | Msa0302920:intron | 20.0% |
| !!! | TTTTGGTAGAATAAAAACAA+TGG | + | chr2_3:59935877-59935896 | Msa0302920:intron | 20.0% |
| !! | GAATAAAAACAATGGTTAAT+TGG | + | chr2_3:59935885-59935904 | Msa0302920:intron | 20.0% |
| !! | TTGAATACAATAAATTGGTA+TGG | - | chr2_3:59936732-59936751 | None:intergenic | 20.0% |
| !! | TTACTAAGCTATAAGAAAAA+TGG | - | chr2_3:59937302-59937321 | None:intergenic | 20.0% |
| !! | TTCTTATAGCTTAGTAATAA+CGG | + | chr2_3:59937305-59937324 | Msa0302920:three_prime_UTR | 20.0% |
| !! | ATTGGAATTGTAAATCAAAA+TGG | + | chr2_3:59937426-59937445 | Msa0302920:three_prime_UTR | 20.0% |
| !! | AAATTTTGTTGAAGTCTGAA+AGG | - | chr2_3:59932486-59932505 | None:intergenic | 25.0% |
| ! | GGTTATTAAATGTCACTATT+AGG | + | chr2_3:59933277-59933296 | Msa0302920:intron | 25.0% |
| !!! | TTTTTGCTGTTGATTGTTTA+GGG | - | chr2_3:59933885-59933904 | None:intergenic | 25.0% |
| !!! | ATTTTTGCTGTTGATTGTTT+AGG | - | chr2_3:59933886-59933905 | None:intergenic | 25.0% |
| ! | TACCTTGAAAGTTGAAATTA+AGG | + | chr2_3:59933913-59933932 | Msa0302920:intron | 25.0% |
| !! | TCATAGTAATTGTTTTCTGA+AGG | + | chr2_3:59934085-59934104 | Msa0302920:intron | 25.0% |
| !! | CATAGTAATTGTTTTCTGAA+GGG | + | chr2_3:59934086-59934105 | Msa0302920:intron | 25.0% |
| ! | TATTGTTGAATCAATGATAG+TGG | + | chr2_3:59934164-59934183 | Msa0302920:intron | 25.0% |
| ! | TTGGTTTCCATTCTTTAATT+TGG | + | chr2_3:59934199-59934218 | Msa0302920:intron | 25.0% |
| ! | ATACTAGCCAAATTAAAGAA+TGG | - | chr2_3:59934209-59934228 | None:intergenic | 25.0% |
| !! | TTAATTTGGCTAGTATCAAT+CGG | + | chr2_3:59934213-59934232 | Msa0302920:intron | 25.0% |
| !!! | CGCAGTTAATTTTTAGTTAT+AGG | - | chr2_3:59934249-59934268 | None:intergenic | 25.0% |
| !! | ATTTTATTGATATGGATCAG+GGG | - | chr2_3:59934332-59934351 | None:intergenic | 25.0% |
| !! | CATTTTATTGATATGGATCA+GGG | - | chr2_3:59934333-59934352 | None:intergenic | 25.0% |
| ! | CTGATCCATATCAATAAAAT+GGG | + | chr2_3:59934332-59934351 | Msa0302920:intron | 25.0% |
| ! | GTAAAGTAAAGAATCGTATT+CGG | - | chr2_3:59934418-59934437 | None:intergenic | 25.0% |
| !!! | AGAAAGTTTTCAAGAAAATG+AGG | - | chr2_3:59934511-59934530 | None:intergenic | 25.0% |
| ! | ATACCTAGCAAAAACTTTAT+TGG | + | chr2_3:59934851-59934870 | Msa0302920:intron | 25.0% |
| ! | AAAAACTTTATTGGCATGAA+AGG | + | chr2_3:59934860-59934879 | Msa0302920:intron | 25.0% |
| !!! | TAATATAGCATTGACCTTAA+GGG | - | chr2_3:59934896-59934915 | None:intergenic | 25.0% |
| !!! | TTAATATAGCATTGACCTTA+AGG | - | chr2_3:59934897-59934916 | None:intergenic | 25.0% |
| !!! | TTTTTTCCTCATCAATACAA+AGG | + | chr2_3:59935043-59935062 | Msa0302920:intron | 25.0% |
| ! | CATTTGTAAATGAGAAAAAG+AGG | - | chr2_3:59935281-59935300 | None:intergenic | 25.0% |
| ! | GATTGAAAAATATGGATCAA+GGG | - | chr2_3:59935350-59935369 | None:intergenic | 25.0% |
| ! | AGATTGAAAAATATGGATCA+AGG | - | chr2_3:59935351-59935370 | None:intergenic | 25.0% |
| !! | CAATGTAATAGTGTTGAAAT+TGG | + | chr2_3:59935655-59935674 | Msa0302920:intron | 25.0% |
| ! | TGAAATAAAGAACCATTTAG+AGG | - | chr2_3:59935970-59935989 | None:intergenic | 25.0% |
| !! | TAAATGGTTCTTTATTTCAC+AGG | + | chr2_3:59935971-59935990 | Msa0302920:intron | 25.0% |
| !! | AAATGGTTCTTTATTTCACA+GGG | + | chr2_3:59935972-59935991 | Msa0302920:intron | 25.0% |
| !! | AAGGTTTGTTTCATTATACT+TGG | + | chr2_3:59936461-59936480 | Msa0302920:intron | 25.0% |
| ! | AACACAATGAAATTTCATCA+AGG | + | chr2_3:59936788-59936807 | Msa0302920:intron | 25.0% |
| ! | ACTCAAATAAAATTGACAAG+AGG | - | chr2_3:59936917-59936936 | None:intergenic | 25.0% |
| !! | ACATTCTTATTCCTATTTTC+TGG | + | chr2_3:59936975-59936994 | Msa0302920:intron | 25.0% |
| ! | CCTTATACACTGTTATAAAA+GGG | - | chr2_3:59937004-59937023 | None:intergenic | 25.0% |
| ! | TTGGATAAGAAACTCAATAT+TGG | + | chr2_3:59937408-59937427 | Msa0302920:three_prime_UTR | 25.0% |
| ! | AAAATTGAAACTATCCTTTC+TGG | + | chr2_3:59937456-59937475 | Msa0302920:intron | 25.0% |
| ! | TGATTGAGATTAAGGTAAAA+TGG | + | chr2_3:59937593-59937612 | Msa0302920:three_prime_UTR | 25.0% |
| AGTAAAATTCACACGAGAAA+AGG | - | chr2_3:59932684-59932703 | None:intergenic | 30.0% | |
| !! | ATAATGATTTGGTCGGTATT+TGG | - | chr2_3:59933386-59933405 | None:intergenic | 30.0% |
| AATACCGACCAAATCATTAT+CGG | + | chr2_3:59933386-59933405 | Msa0302920:intron | 30.0% | |
| AACTTCGCTATTTATTACGA+AGG | - | chr2_3:59933462-59933481 | None:intergenic | 30.0% | |
| TCATGATCATGTATTCAACA+TGG | - | chr2_3:59933502-59933521 | None:intergenic | 30.0% | |
| ! | TAAGTGTAAAGTTTGATAGC+TGG | + | chr2_3:59933599-59933618 | Msa0302920:intron | 30.0% |
| !!! | TTTTGCTGTTGATTGTTTAG+GGG | - | chr2_3:59933884-59933903 | None:intergenic | 30.0% |
| TGCCTTAATTTCAACTTTCA+AGG | - | chr2_3:59933918-59933937 | None:intergenic | 30.0% | |
| !!! | TTGAATTTTTTGCCCACTTT+TGG | + | chr2_3:59933943-59933962 | Msa0302920:intron | 30.0% |
| !!! | TGAATTTTTTGCCCACTTTT+GGG | + | chr2_3:59933944-59933963 | Msa0302920:intron | 30.0% |
| ! | GGAAAATACTGACCATTTTA+AGG | + | chr2_3:59934041-59934060 | Msa0302920:CDS | 30.0% |
| ! | CCATTTTATTGATATGGATC+AGG | - | chr2_3:59934334-59934353 | None:intergenic | 30.0% |
| CCTGATCCATATCAATAAAA+TGG | + | chr2_3:59934331-59934350 | Msa0302920:intron | 30.0% | |
| ! | TGCATCCCATTTTATTGATA+TGG | - | chr2_3:59934340-59934359 | None:intergenic | 30.0% |
| ATATCAATAAAATGGGATGC+AGG | + | chr2_3:59934339-59934358 | Msa0302920:intron | 30.0% | |
| ! | CAGTTAGTTTAATAGTTGAG+CGG | + | chr2_3:59934588-59934607 | Msa0302920:intron | 30.0% |
| TACATGATATTTCAGTCTGT+AGG | + | chr2_3:59934712-59934731 | Msa0302920:intron | 30.0% | |
| GAGAGAAAATAGTAGTTCAT+AGG | - | chr2_3:59934759-59934778 | None:intergenic | 30.0% | |
| ! | ATGCCAATAAAGTTTTTGCT+AGG | - | chr2_3:59934857-59934876 | None:intergenic | 30.0% |
| TTTATTGGCATGAAAGGAAA+AGG | + | chr2_3:59934866-59934885 | Msa0302920:intron | 30.0% | |
| GAATTAAAACGACCAAATCA+AGG | - | chr2_3:59935244-59935263 | None:intergenic | 30.0% | |
| AAGAAAAGAGAGAAATCTTG+TGG | - | chr2_3:59935325-59935344 | None:intergenic | 30.0% | |
| ! | AACATTCATCTTGTTTGTGT+AGG | + | chr2_3:59935569-59935588 | Msa0302920:intron | 30.0% |
| CAAATAGAACAATGTCTTCT+TGG | + | chr2_3:59935760-59935779 | Msa0302920:intron | 30.0% | |
| AGAATCCAAAATCTTTAGGT+TGG | - | chr2_3:59935791-59935810 | None:intergenic | 30.0% | |
| TCAAAGAAACATTCACTCAT+TGG | + | chr2_3:59935929-59935948 | Msa0302920:intron | 30.0% | |
| AATATTCTCTGTCCTCTAAA+TGG | + | chr2_3:59935955-59935974 | Msa0302920:intron | 30.0% | |
| TTGTCTACTGTGAAAAATGA+TGG | + | chr2_3:59936191-59936210 | Msa0302920:CDS | 30.0% | |
| TTCAAAGAGTTAACAGAGTA+TGG | - | chr2_3:59936419-59936438 | None:intergenic | 30.0% | |
| TATACTAAACTGCATATCTG+TGG | + | chr2_3:59936512-59936531 | Msa0302920:intron | 30.0% | |
| GCATATAACTGTTAGACAAA+TGG | + | chr2_3:59936534-59936553 | Msa0302920:intron | 30.0% | |
| ATAACTGTTAGACAAATGGT+TGG | + | chr2_3:59936538-59936557 | Msa0302920:intron | 30.0% | |
| TCAGATACAACAAATCAACA+TGG | + | chr2_3:59936680-59936699 | Msa0302920:intron | 30.0% | |
| TAAAAGGGAAACCAGAAAAT+AGG | - | chr2_3:59936989-59937008 | None:intergenic | 30.0% | |
| ! | CCCTTTTATAACAGTGTATA+AGG | + | chr2_3:59937001-59937020 | Msa0302920:intron | 30.0% |
| GCCTTATACACTGTTATAAA+AGG | - | chr2_3:59937005-59937024 | None:intergenic | 30.0% | |
| ACAAGAATTCAAAGATCAGA+TGG | + | chr2_3:59937189-59937208 | Msa0302920:three_prime_UTR | 30.0% | |
| TTATAGCTTAGTAATAACGG+AGG | + | chr2_3:59937308-59937327 | Msa0302920:three_prime_UTR | 30.0% | |
| ! | ATTCAGAGAGAGTTAGGTTT+TGG | - | chr2_3:59932565-59932584 | None:intergenic | 35.0% |
| TGATCAACTAACACTTGAAC+TGG | + | chr2_3:59933033-59933052 | Msa0302920:intron | 35.0% | |
| ATACCGACCAAATCATTATC+GGG | + | chr2_3:59933387-59933406 | Msa0302920:intron | 35.0% | |
| AAAGCAACCCGATAATGATT+TGG | - | chr2_3:59933397-59933416 | None:intergenic | 35.0% | |
| GACAATATCATGCGAGTTAA+TGG | + | chr2_3:59933531-59933550 | Msa0302920:intron | 35.0% | |
| ATATCATGCGAGTTAATGGT+TGG | + | chr2_3:59933535-59933554 | Msa0302920:intron | 35.0% | |
| GTTTATCTTATCAGTTCGAC+AGG | + | chr2_3:59933662-59933681 | Msa0302920:intron | 35.0% | |
| !! | AAGCATTGTGAAAGTATTGC+CGG | - | chr2_3:59933722-59933741 | None:intergenic | 35.0% |
| AATGGTAGTTGTACCTTTGA+AGG | - | chr2_3:59933839-59933858 | None:intergenic | 35.0% | |
| TTATATATGTCATGCTCTGC+AGG | + | chr2_3:59933993-59934012 | Msa0302920:intron | 35.0% | |
| TGCTGAAACGTACCTTAAAA+TGG | - | chr2_3:59934056-59934075 | None:intergenic | 35.0% | |
| !!! | TTTTAAGGTACGTTTCAGCA+TGG | + | chr2_3:59934056-59934075 | Msa0302920:intron | 35.0% |
| !! | AGTAATTGTTTTCTGAAGGG+TGG | + | chr2_3:59934089-59934108 | Msa0302920:intron | 35.0% |
| !! | GTTGAATCAATGATAGTGGA+AGG | + | chr2_3:59934168-59934187 | Msa0302920:intron | 35.0% |
| !! | AATGATAGTGGAAGGATTTC+AGG | + | chr2_3:59934176-59934195 | Msa0302920:intron | 35.0% |
| ! | AGATTTGGTAATCATGCCTT+TGG | - | chr2_3:59934394-59934413 | None:intergenic | 35.0% |
| ! | TAAGCGTTGCTGATATCATA+GGG | + | chr2_3:59934647-59934666 | Msa0302920:CDS | 35.0% |
| ! | TGAACTACTATTTTCTCTCC+AGG | + | chr2_3:59934760-59934779 | Msa0302920:intron | 35.0% |
| TATGTTTGCATAGTAATGCC+TGG | - | chr2_3:59934781-59934800 | None:intergenic | 35.0% | |
| TTGCTAGGTATCATAGCATA+CGG | - | chr2_3:59934842-59934861 | None:intergenic | 35.0% | |
| TTTCCTCATCAATACAAAGG+AGG | + | chr2_3:59935046-59935065 | Msa0302920:intron | 35.0% | |
| TTCCTCATCAATACAAAGGA+GGG | + | chr2_3:59935047-59935066 | Msa0302920:intron | 35.0% | |
| TGATCTATCTGTGACTTTGT+AGG | + | chr2_3:59935082-59935101 | Msa0302920:intron | 35.0% | |
| ! | AAGTACTCTTTTTCCTCTGA+AGG | - | chr2_3:59935182-59935201 | None:intergenic | 35.0% |
| CTTGCTTTAATGCCTTGATT+TGG | + | chr2_3:59935229-59935248 | Msa0302920:intron | 35.0% | |
| AAGGTATACAGTTGCACTTT+AGG | + | chr2_3:59935471-59935490 | Msa0302920:intron | 35.0% | |
| AAAGTAGTGACAAATGACCA+AGG | - | chr2_3:59935520-59935539 | None:intergenic | 35.0% | |
| ! | CTTTGTGTGTATTTGATAGC+TGG | + | chr2_3:59935536-59935555 | Msa0302920:intron | 35.0% |
| !! | ATCCAAAATCTTTAGGTTGG+TGG | - | chr2_3:59935788-59935807 | None:intergenic | 35.0% |
| GAATGTTTCTTTGAACGTCT+GGG | - | chr2_3:59935923-59935942 | None:intergenic | 35.0% | |
| TGAATGTTTCTTTGAACGTC+TGG | - | chr2_3:59935924-59935943 | None:intergenic | 35.0% | |
| CTGATCTTGAAAATGCACAA+TGG | - | chr2_3:59936003-59936022 | None:intergenic | 35.0% | |
| TTGAGATTACCAAGGACATT+CGG | - | chr2_3:59936056-59936075 | None:intergenic | 35.0% | |
| CCAGCATAAAAGTTAACAGA+CGG | - | chr2_3:59936146-59936165 | None:intergenic | 35.0% | |
| ! | CGTCTGTTAACTTTTATGCT+GGG | + | chr2_3:59936144-59936163 | Msa0302920:CDS | 35.0% |
| ! | GTCTGTTAACTTTTATGCTG+GGG | + | chr2_3:59936145-59936164 | Msa0302920:CDS | 35.0% |
| ! | TTAACTTTTATGCTGGGGAT+TGG | + | chr2_3:59936150-59936169 | Msa0302920:CDS | 35.0% |
| ! | TAACTTTTATGCTGGGGATT+GGG | + | chr2_3:59936151-59936170 | Msa0302920:CDS | 35.0% |
| ! | AATCTAGTTCAAGAAGGTCT+AGG | + | chr2_3:59936306-59936325 | Msa0302920:CDS | 35.0% |
| ! | ACAAATGGTTGGTTGTAGTT+TGG | + | chr2_3:59936549-59936568 | Msa0302920:intron | 35.0% |
| ! | CAAATGGTTGGTTGTAGTTT+GGG | + | chr2_3:59936550-59936569 | Msa0302920:intron | 35.0% |
| ! | TCATTGTGTTTTGTATGCCA+TGG | - | chr2_3:59936778-59936797 | None:intergenic | 35.0% |
| ! | GTAGATTTTCAGACGAAGTA+AGG | + | chr2_3:59936817-59936836 | Msa0302920:intron | 35.0% |
| TGCAATACTCATTGTAGTGT+GGG | - | chr2_3:59936864-59936883 | None:intergenic | 35.0% | |
| ATGCAATACTCATTGTAGTG+TGG | - | chr2_3:59936865-59936884 | None:intergenic | 35.0% | |
| ! | CACTACAATGAGTATTGCAT+CGG | + | chr2_3:59936865-59936884 | Msa0302920:intron | 35.0% |
| AAGAGGAAACTTATGCAATC+AGG | - | chr2_3:59936900-59936919 | None:intergenic | 35.0% | |
| AGATATACTACTCCATATGG+AGG | - | chr2_3:59937027-59937046 | None:intergenic | 35.0% | |
| GCAAGATATACTACTCCATA+TGG | - | chr2_3:59937030-59937049 | None:intergenic | 35.0% | |
| AGAAATGTGTTAGATGAGGA+GGG | + | chr2_3:59937099-59937118 | Msa0302920:CDS | 35.0% | |
| !!! | TTTTGGAGTGCATTTGGTTA+AGG | + | chr2_3:59937125-59937144 | Msa0302920:CDS | 35.0% |
| AGTGCATTTGGTTAAGGATT+TGG | + | chr2_3:59937131-59937150 | Msa0302920:CDS | 35.0% | |
| ! | GTTTTGCATACTCATATCGT+TGG | + | chr2_3:59937389-59937408 | Msa0302920:three_prime_UTR | 35.0% |
| GAAACTATCCTTTCTGGATT+TGG | + | chr2_3:59937462-59937481 | Msa0302920:intron | 35.0% | |
| TAGAAGATCCAAATCCAGAA+AGG | - | chr2_3:59937473-59937492 | None:intergenic | 35.0% | |
| TCGATGAGTGATTGAGATTA+AGG | + | chr2_3:59937585-59937604 | Msa0302920:three_prime_UTR | 35.0% | |
| ACCTAACTCTCTCTGAATTC+AGG | + | chr2_3:59932567-59932586 | Msa0302920:five_prime_UTR | 40.0% | |
| ACCTGAATTCAGAGAGAGTT+AGG | - | chr2_3:59932571-59932590 | None:intergenic | 40.0% | |
| TTCATGGACGATTGTCCAAA+AGG | - | chr2_3:59933358-59933377 | None:intergenic | 40.0% | |
| !! | CAACCCGATAATGATTTGGT+CGG | - | chr2_3:59933393-59933412 | None:intergenic | 40.0% |
| !! | AGCATTGTGAAAGTATTGCC+GGG | - | chr2_3:59933721-59933740 | None:intergenic | 40.0% |
| ATACTTTCACAATGCTTGCC+TGG | + | chr2_3:59933725-59933744 | Msa0302920:CDS | 40.0% | |
| TGCGAGATGAATAGCTTTCT+CGG | - | chr2_3:59933795-59933814 | None:intergenic | 40.0% | |
| AGTGGAGATTCTTCCTTCAA+AGG | + | chr2_3:59933823-59933842 | Msa0302920:CDS | 40.0% | |
| ! | ATAGTGGAAGGATTTCAGGT+TGG | + | chr2_3:59934180-59934199 | Msa0302920:intron | 40.0% |
| AATGTGAGATGTCATGCAGT+TGG | + | chr2_3:59934290-59934309 | Msa0302920:intron | 40.0% | |
| AGAATCGTATTCGGCAGATT+TGG | - | chr2_3:59934409-59934428 | None:intergenic | 40.0% | |
| CTTTACGTTTCTGCAGAATC+TGG | + | chr2_3:59934432-59934451 | Msa0302920:intron | 40.0% | |
| ! | GTAAGCGTTGCTGATATCAT+AGG | + | chr2_3:59934646-59934665 | Msa0302920:CDS | 40.0% |
| GTTGCTGATATCATAGGGTT+CGG | + | chr2_3:59934652-59934671 | Msa0302920:CDS | 40.0% | |
| AGAGACAATATCCTCAAGAC+TGG | + | chr2_3:59934681-59934700 | Msa0302920:CDS | 40.0% | |
| ACAATATCCTCAAGACTGGA+TGG | + | chr2_3:59934685-59934704 | Msa0302920:CDS | 40.0% | |
| AAGGAAAAGGACAACCCTTA+AGG | + | chr2_3:59934879-59934898 | Msa0302920:intron | 40.0% | |
| !! | CACAAATTGGCTTTGTAGGT+TGG | - | chr2_3:59934941-59934960 | None:intergenic | 40.0% |
| !! | CTGACACAAATTGGCTTTGT+AGG | - | chr2_3:59934945-59934964 | None:intergenic | 40.0% |
| TCCTCATCAATACAAAGGAG+GGG | + | chr2_3:59935048-59935067 | Msa0302920:intron | 40.0% | |
| TTGTAGGCTATCCAAAATCC+TGG | + | chr2_3:59935098-59935117 | Msa0302920:intron | 40.0% | |
| TCAGGAATGAGATTCGTGAT+GGG | + | chr2_3:59935149-59935168 | Msa0302920:CDS | 40.0% | |
| !! | CAGAGGAAAAAGAGTACTTG+AGG | + | chr2_3:59935183-59935202 | Msa0302920:CDS | 40.0% |
| TTCAAGCAAGCAAAGATTCC+AGG | - | chr2_3:59935453-59935472 | None:intergenic | 40.0% | |
| TGGAATCTTTGCTTGCTTGA+AGG | + | chr2_3:59935452-59935471 | Msa0302920:CDS | 40.0% | |
| ! | TGCTCATTTTCTCCTTTCCT+TGG | + | chr2_3:59935500-59935519 | Msa0302920:intron | 40.0% |
| AGTGACAAATGACCAAGGAA+AGG | - | chr2_3:59935515-59935534 | None:intergenic | 40.0% | |
| ! | CATCTTGTTTGTGTAGGTGT+TGG | + | chr2_3:59935575-59935594 | Msa0302920:intron | 40.0% |
| ! | CTTGGGAAGGCATAAAAAGA+AGG | - | chr2_3:59935704-59935723 | None:intergenic | 40.0% |
| ! | TGCCACCAACCTAAAGATTT+TGG | + | chr2_3:59935783-59935802 | Msa0302920:intron | 40.0% |
| TCTTTGAACGTCTGGGAAAA+AGG | - | chr2_3:59935916-59935935 | None:intergenic | 40.0% | |
| ! | CCGTCTGTTAACTTTTATGC+TGG | + | chr2_3:59936143-59936162 | Msa0302920:CDS | 40.0% |
| AATGAGTTTGAGCTTCTCTG+AGG | + | chr2_3:59936232-59936251 | Msa0302920:CDS | 40.0% | |
| !! | CTTCTCTGAGGAAGACTTTT+TGG | + | chr2_3:59936244-59936263 | Msa0302920:CDS | 40.0% |
| ! | GAGGAAGACTTTTTGGATGT+AGG | + | chr2_3:59936251-59936270 | Msa0302920:CDS | 40.0% |
| ! | GACACGAATCTAGTTCAAGA+AGG | + | chr2_3:59936300-59936319 | Msa0302920:CDS | 40.0% |
| GCTGTATGCTCTCATTAAGA+AGG | + | chr2_3:59936442-59936461 | Msa0302920:CDS | 40.0% | |
| GATGACATGACAATACGTAG+AGG | - | chr2_3:59936662-59936681 | None:intergenic | 40.0% | |
| TCACCGTCTAAGTATGCAAT+CGG | + | chr2_3:59936703-59936722 | Msa0302920:intron | 40.0% | |
| ! | TCACCGATTGCATACTTAGA+CGG | - | chr2_3:59936709-59936728 | None:intergenic | 40.0% |
| ! | GGCAATAAGTTGAAACACCA+TGG | + | chr2_3:59936758-59936777 | Msa0302920:intron | 40.0% |
| AATACTCATTGTAGTGTGGG+TGG | - | chr2_3:59936861-59936880 | None:intergenic | 40.0% | |
| ! | TACAATGAGTATTGCATCGG+TGG | + | chr2_3:59936868-59936887 | Msa0302920:intron | 40.0% |
| CCAACATAGTGCTTCTTAGT+TGG | - | chr2_3:59937054-59937073 | None:intergenic | 40.0% | |
| !! | CCAACTAAGAAGCACTATGT+TGG | + | chr2_3:59937051-59937070 | Msa0302920:CDS | 40.0% |
| !! | CACTATGTTGGCTTTAGCAA+TGG | + | chr2_3:59937063-59937082 | Msa0302920:CDS | 40.0% |
| GCTGAGAAATGTGTTAGATG+AGG | + | chr2_3:59937095-59937114 | Msa0302920:CDS | 40.0% | |
| GAGAAATGTGTTAGATGAGG+AGG | + | chr2_3:59937098-59937117 | Msa0302920:CDS | 40.0% | |
| !!! | TTAGATGAGGAGGGCATTTT+TGG | + | chr2_3:59937108-59937127 | Msa0302920:CDS | 40.0% |
| ATTTGGCTGACAGAGATATC+TGG | + | chr2_3:59937148-59937167 | Msa0302920:CDS | 40.0% | |
| TCAGTGCAAAGCAATCTCAT+CGG | + | chr2_3:59937363-59937382 | Msa0302920:three_prime_UTR | 40.0% | |
| ! | ATCAACCACTGGATTAGGAA+AGG | - | chr2_3:59937526-59937545 | None:intergenic | 40.0% |
| TCGGTATTTGGCGACATTCA+TGG | - | chr2_3:59933374-59933393 | None:intergenic | 45.0% | |
| GAATCGCAAGAATCAACACG+CGG | - | chr2_3:59933428-59933447 | None:intergenic | 45.0% | |
| !! | GCATTGTGAAAGTATTGCCG+GGG | - | chr2_3:59933720-59933739 | None:intergenic | 45.0% |
| GCGAGATGAATAGCTTTCTC+GGG | - | chr2_3:59933794-59933813 | None:intergenic | 45.0% | |
| !! | TCGATGGCGGAAGATGAAAA+TGG | - | chr2_3:59933857-59933876 | None:intergenic | 45.0% |
| !! | ATTGTTTAGGGGTGTCTCGA+TGG | - | chr2_3:59933873-59933892 | None:intergenic | 45.0% |
| TTTCACACTGACAAGGAAGC+TGG | + | chr2_3:59934018-59934037 | Msa0302920:CDS | 45.0% | |
| TTCACACTGACAAGGAAGCT+GGG | + | chr2_3:59934019-59934038 | Msa0302920:CDS | 45.0% | |
| TGAAGGGTGGCATAATCAGA+TGG | + | chr2_3:59934102-59934121 | Msa0302920:intron | 45.0% | |
| TGCAGTTGGCAAACAACTAC+AGG | + | chr2_3:59934304-59934323 | Msa0302920:intron | 45.0% | |
| TCCTGTCTTAAACCTCCTAC+AGG | + | chr2_3:59934618-59934637 | Msa0302920:intron | 45.0% | |
| CCTGTCTTAAACCTCCTACA+GGG | + | chr2_3:59934619-59934638 | Msa0302920:intron | 45.0% | |
| CAACGCTTACTATTCCCTGT+AGG | - | chr2_3:59934636-59934655 | None:intergenic | 45.0% | |
| GTACATACCATCCAGTCTTG+AGG | - | chr2_3:59934695-59934714 | None:intergenic | 45.0% | |
| ! | ATGGAACTGGACCAGGATTT+TGG | - | chr2_3:59935112-59935131 | None:intergenic | 45.0% |
| ACTGACAAGATCGATGGAAC+TGG | - | chr2_3:59935125-59935144 | None:intergenic | 45.0% | |
| GAGAACACTGACAAGATCGA+TGG | - | chr2_3:59935131-59935150 | None:intergenic | 45.0% | |
| TCGATCTTGTCAGTGTTCTC+AGG | + | chr2_3:59935131-59935150 | Msa0302920:CDS | 45.0% | |
| CTCAGGAATGAGATTCGTGA+TGG | + | chr2_3:59935148-59935167 | Msa0302920:CDS | 45.0% | |
| ATAGTTGCAACTGAGCTGCA+CGG | - | chr2_3:59935424-59935443 | None:intergenic | 45.0% | |
| AGTTGCAACTATGGACTTCC+TGG | + | chr2_3:59935432-59935451 | Msa0302920:CDS | 45.0% | |
| ! | AAGGTGAAAGCACAGTGCAT+TGG | - | chr2_3:59935685-59935704 | None:intergenic | 45.0% |
| AAGTTGGATGGAACTTGGGA+AGG | - | chr2_3:59935717-59935736 | None:intergenic | 45.0% | |
| ! | CGACAAGTTGGATGGAACTT+GGG | - | chr2_3:59935721-59935740 | None:intergenic | 45.0% |
| ACAACTGTACCGAATGTCCT+TGG | + | chr2_3:59936044-59936063 | Msa0302920:CDS | 45.0% | |
| ! | GAGCTTGCTTGAGATTACCA+AGG | - | chr2_3:59936064-59936083 | None:intergenic | 45.0% |
| ATCTCAAGCAAGCTCGTGAT+AGG | + | chr2_3:59936069-59936088 | Msa0302920:CDS | 45.0% | |
| AGTCTGCCTTGAAGGAGTAA+GGG | - | chr2_3:59936117-59936136 | None:intergenic | 45.0% | |
| TTCACAGTAGACAACACGCT+AGG | - | chr2_3:59936185-59936204 | None:intergenic | 45.0% | |
| GAGAAGCTCAAACTCATTCC+AGG | - | chr2_3:59936230-59936249 | None:intergenic | 45.0% | |
| GATGTAGGTAGTAGCCAAGA+TGG | + | chr2_3:59936266-59936285 | Msa0302920:CDS | 45.0% | |
| AGCCAAGATGGTAGCATCAT+TGG | + | chr2_3:59936278-59936297 | Msa0302920:CDS | 45.0% | |
| GTCCAATGATGCTACCATCT+TGG | - | chr2_3:59936283-59936302 | None:intergenic | 45.0% | |
| AGAAGGTCTAGGAAACTCTC+AGG | + | chr2_3:59936317-59936336 | Msa0302920:CDS | 45.0% | |
| AGCATGGGAAAGAGCTAATG+AGG | + | chr2_3:59936346-59936365 | Msa0302920:CDS | 45.0% | |
| AAGAGCTAATGAGGCAGATC+AGG | + | chr2_3:59936355-59936374 | Msa0302920:CDS | 45.0% | |
| AGAGCTAATGAGGCAGATCA+GGG | + | chr2_3:59936356-59936375 | Msa0302920:CDS | 45.0% | |
| ! | ATGGTTGGTTGTAGTTTGGG+CGG | + | chr2_3:59936553-59936572 | Msa0302920:intron | 45.0% |
| ! | TCACTGCGTTTTGTATGCCA+TGG | + | chr2_3:59936634-59936653 | Msa0302920:intron | 45.0% |
| CAGTGTATAAGGCCTCCATA+TGG | + | chr2_3:59937012-59937031 | Msa0302920:intron | 45.0% | |
| !!! | GGGCATTTTTGGAGTGCATT+TGG | + | chr2_3:59937119-59937138 | Msa0302920:CDS | 45.0% |
| TCTCTCCTTTCCTAATCCAG+TGG | + | chr2_3:59937518-59937537 | Msa0302920:three_prime_UTR | 45.0% | |
| GGTAAAATGGACAACGTGAG+AGG | + | chr2_3:59937606-59937625 | Msa0302920:three_prime_UTR | 45.0% | |
| !! | TAAATAAAAAACAAAAATTA+AGG | - | chr2_3:59932623-59932642 | None:intergenic | 5.0% |
| !! | CAAAATAATATAAAATATAA+AGG | - | chr2_3:59934371-59934390 | None:intergenic | 5.0% |
| !!! | TTATAAACAATTTTTTTTAT+GGG | - | chr2_3:59937553-59937572 | None:intergenic | 5.0% |
| !!! | TTTATAAACAATTTTTTTTA+TGG | - | chr2_3:59937554-59937573 | None:intergenic | 5.0% |
| GAAGGAAGAATCTCCACTGC+TGG | - | chr2_3:59933821-59933840 | None:intergenic | 50.0% | |
| !! | TTTGCCCACTTTTGGGTGAC+TGG | + | chr2_3:59933951-59933970 | Msa0302920:intron | 50.0% |
| !! | TTGCCCACTTTTGGGTGACT+GGG | + | chr2_3:59933952-59933971 | Msa0302920:intron | 50.0% |
| TCACACTGACAAGGAAGCTG+GGG | + | chr2_3:59934020-59934039 | Msa0302920:CDS | 50.0% | |
| ! | CCCTGTAGGAGGTTTAAGAC+AGG | - | chr2_3:59934622-59934641 | None:intergenic | 50.0% |
| CGCTTACTATTCCCTGTAGG+AGG | - | chr2_3:59934633-59934652 | None:intergenic | 50.0% | |
| GCTGATATCATAGGGTTCGG+TGG | + | chr2_3:59934655-59934674 | Msa0302920:CDS | 50.0% | |
| ! | GCCCCTCCTTTGTATTGATG+AGG | - | chr2_3:59935052-59935071 | None:intergenic | 50.0% |
| AAGATCGATGGAACTGGACC+AGG | - | chr2_3:59935119-59935138 | None:intergenic | 50.0% | |
| GATGGGCAATTGACCTTCAG+AGG | + | chr2_3:59935166-59935185 | Msa0302920:CDS | 50.0% | |
| GTGCAGCTCAGTTGCAACTA+TGG | + | chr2_3:59935423-59935442 | Msa0302920:intron | 50.0% | |
| ! | GCGACAAGTTGGATGGAACT+TGG | - | chr2_3:59935722-59935741 | None:intergenic | 50.0% |
| CTTTCGTCAACGCGACAAGT+TGG | - | chr2_3:59935733-59935752 | None:intergenic | 50.0% | |
| AGTCTCCCCTTACTCCTTCA+AGG | + | chr2_3:59936108-59936127 | Msa0302920:CDS | 50.0% | |
| GTCTGCCTTGAAGGAGTAAG+GGG | - | chr2_3:59936116-59936135 | None:intergenic | 50.0% | |
| GAGTCTGCCTTGAAGGAGTA+AGG | - | chr2_3:59936118-59936137 | None:intergenic | 50.0% | |
| GATGGATATGAAGCGACACC+TGG | + | chr2_3:59936209-59936228 | Msa0302920:CDS | 50.0% | |
| AACTCTCAGGAAGTCGAGCA+TGG | + | chr2_3:59936330-59936349 | Msa0302920:CDS | 50.0% | |
| ACTCTCAGGAAGTCGAGCAT+GGG | + | chr2_3:59936331-59936350 | Msa0302920:CDS | 50.0% | |
| GAGCTAATGAGGCAGATCAG+GGG | + | chr2_3:59936357-59936376 | Msa0302920:CDS | 50.0% | |
| AGCTAATGAGGCAGATCAGG+GGG | + | chr2_3:59936358-59936377 | Msa0302920:CDS | 50.0% | |
| !! | GACAATACGTAGAGGCACCA+TGG | - | chr2_3:59936654-59936673 | None:intergenic | 50.0% |
| GGTCGATCAACCACTGGATT+AGG | - | chr2_3:59937531-59937550 | None:intergenic | 50.0% | |
| TTATGGGGTCGATCAACCAC+TGG | - | chr2_3:59937537-59937556 | None:intergenic | 50.0% | |
| ATCAACTGCAATGCGTGCCC+CGG | + | chr2_3:59933700-59933719 | Msa0302920:exon | 55.0% | |
| ! | TTCCATGATCGCGAGGCACT+AGG | - | chr2_3:59933751-59933770 | None:intergenic | 55.0% |
| CTGAGACTTCCATGATCGCG+AGG | - | chr2_3:59933758-59933777 | None:intergenic | 55.0% | |
| TCATCTCGCATCACCAGCAG+TGG | + | chr2_3:59933805-59933824 | Msa0302920:CDS | 55.0% | |
| !! | GTTTAGGGGTGTCTCGATGG+CGG | - | chr2_3:59933870-59933889 | None:intergenic | 55.0% |
| !! | TGCCCACTTTTGGGTGACTG+GGG | + | chr2_3:59933953-59933972 | Msa0302920:intron | 55.0% |
| TCCCCCAGTCACCCAAAAGT+GGG | - | chr2_3:59933958-59933977 | None:intergenic | 55.0% | |
| TTCCCCCAGTCACCCAAAAG+TGG | - | chr2_3:59933959-59933978 | None:intergenic | 55.0% | |
| GCAGGCGTTTCACACTGACA+AGG | + | chr2_3:59934011-59934030 | Msa0302920:intron | 55.0% | |
| ! | CGTCAACGCGACAAGTTGGA+TGG | - | chr2_3:59935729-59935748 | None:intergenic | 55.0% |
| GAAGGAGTAAGGGGAGACTC+TGG | - | chr2_3:59936107-59936126 | None:intergenic | 55.0% | |
| GGTGCAAGAGTCTGCCTTGA+AGG | - | chr2_3:59936125-59936144 | None:intergenic | 55.0% | |
| AATGAGGCAGATCAGGGGGA+TGG | + | chr2_3:59936362-59936381 | Msa0302920:CDS | 55.0% | |
| !! | GCCCACTTTTGGGTGACTGG+GGG | + | chr2_3:59933954-59933973 | Msa0302920:intron | 60.0% |
| ! | TGATCGCGAGGCACTAGGCC+AGG | - | chr2_3:59933746-59933765 | None:intergenic | 65.0% |
| GGCCTAGTGCCTCGCGATCA+TGG | + | chr2_3:59933746-59933765 | Msa0302920:CDS | 65.0% | |
| GAGGCAGATCAGGGGGATGG+TGG | + | chr2_3:59936365-59936384 | Msa0302920:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 59932473 | 59937651 | 59932473 | ID=Msa0302920;Name=Msa0302920 |
| chr2_3 | mRNA | 59932473 | 59937651 | 59932473 | ID=Msa0302920-mRNA-1;Parent=Msa0302920;Name=Msa0302920-mRNA-1;_AED=0.08;_eAED=0.08;_QI=163|1|1|1|0.75|0.55|9|442|346 |
| chr2_3 | exon | 59932473 | 59932588 | 59932473 | ID=Msa0302920-mRNA-1:exon:19478;Parent=Msa0302920-mRNA-1 |
| chr2_3 | exon | 59933663 | 59933844 | 59933663 | ID=Msa0302920-mRNA-1:exon:19479;Parent=Msa0302920-mRNA-1 |
| chr2_3 | exon | 59934015 | 59934062 | 59934015 | ID=Msa0302920-mRNA-1:exon:19480;Parent=Msa0302920-mRNA-1 |
| chr2_3 | exon | 59934640 | 59934706 | 59934640 | ID=Msa0302920-mRNA-1:exon:19481;Parent=Msa0302920-mRNA-1 |
| chr2_3 | exon | 59935104 | 59935204 | 59935104 | ID=Msa0302920-mRNA-1:exon:19482;Parent=Msa0302920-mRNA-1 |
| chr2_3 | exon | 59935429 | 59935473 | 59935429 | ID=Msa0302920-mRNA-1:exon:19483;Parent=Msa0302920-mRNA-1 |
| chr2_3 | exon | 59935993 | 59936463 | 59935993 | ID=Msa0302920-mRNA-1:exon:19484;Parent=Msa0302920-mRNA-1 |
| chr2_3 | exon | 59937015 | 59937465 | 59937015 | ID=Msa0302920-mRNA-1:exon:19485;Parent=Msa0302920-mRNA-1 |
| chr2_3 | exon | 59937487 | 59937651 | 59937487 | ID=Msa0302920-mRNA-1:exon:19486;Parent=Msa0302920-mRNA-1 |
| chr2_3 | five_prime_UTR | 59932473 | 59932588 | 59932473 | ID=Msa0302920-mRNA-1:five_prime_utr;Parent=Msa0302920-mRNA-1 |
| chr2_3 | five_prime_UTR | 59933663 | 59933709 | 59933663 | ID=Msa0302920-mRNA-1:five_prime_utr;Parent=Msa0302920-mRNA-1 |
| chr2_3 | CDS | 59933710 | 59933844 | 59933710 | ID=Msa0302920-mRNA-1:cds;Parent=Msa0302920-mRNA-1 |
| chr2_3 | CDS | 59934015 | 59934062 | 59934015 | ID=Msa0302920-mRNA-1:cds;Parent=Msa0302920-mRNA-1 |
| chr2_3 | CDS | 59934640 | 59934706 | 59934640 | ID=Msa0302920-mRNA-1:cds;Parent=Msa0302920-mRNA-1 |
| chr2_3 | CDS | 59935104 | 59935204 | 59935104 | ID=Msa0302920-mRNA-1:cds;Parent=Msa0302920-mRNA-1 |
| chr2_3 | CDS | 59935429 | 59935473 | 59935429 | ID=Msa0302920-mRNA-1:cds;Parent=Msa0302920-mRNA-1 |
| chr2_3 | CDS | 59935993 | 59936463 | 59935993 | ID=Msa0302920-mRNA-1:cds;Parent=Msa0302920-mRNA-1 |
| chr2_3 | CDS | 59937015 | 59937188 | 59937015 | ID=Msa0302920-mRNA-1:cds;Parent=Msa0302920-mRNA-1 |
| chr2_3 | three_prime_UTR | 59937189 | 59937465 | 59937189 | ID=Msa0302920-mRNA-1:three_prime_utr;Parent=Msa0302920-mRNA-1 |
| chr2_3 | three_prime_UTR | 59937487 | 59937651 | 59937487 | ID=Msa0302920-mRNA-1:three_prime_utr;Parent=Msa0302920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
