AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0303530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0303530 MtrunA17_Chr2g0320431 68.129 342 45 7 1 342 1 278 6.05e-142 402
Msa0303530 MtrunA17_Chr2g0320451 86.076 158 8 2 15 171 217 361 6.70e-83 271
Msa0303530 MtrunA17_Chr2g0314231 77.241 145 31 2 15 158 1 144 8.85e-74 225
Msa0303530 MtrunA17_Chr2g0314241 62.329 146 12 2 15 159 51 154 6.86e-52 169
Msa0303530 MtrunA17_Chr2g0320401 92.424 66 5 0 12 77 42 107 6.42e-36 126
Msa0303530 MtrunA17_Chr3g0079841 95.833 48 2 0 285 332 174 221 7.64e-22 93.6
Msa0303530 MtrunA17_Chr7g0265211 34.722 144 77 2 21 164 246 372 2.28e-18 86.7
Msa0303530 MtrunA17_Chr7g0222931 34.848 132 68 2 13 144 394 507 2.88e-16 79.7
Msa0303530 MtrunA17_Chr1g0182221 33.333 129 68 2 16 144 394 504 1.05e-15 78.2
Msa0303530 MtrunA17_Chr1g0182481 33.607 122 63 2 23 144 254 357 2.56e-14 74.3
Msa0303530 MtrunA17_Chr1g0179841 28.977 176 106 4 25 200 97 253 2.22e-13 71.2
Msa0303530 MtrunA17_Chr4g0030901 28.169 142 82 3 4 144 298 420 2.27e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0303530 AT2G27980.1 39.834 241 104 7 16 247 366 574 5.68e-38 144
Msa0303530 AT5G13660.1 34.043 141 74 3 13 152 388 510 4.33e-16 79.7
Msa0303530 AT5G13660.2 33.333 141 76 3 13 152 388 511 1.06e-15 78.6
Msa0303530 AT3G53680.1 33.333 132 70 2 13 144 172 285 1.18e-14 75.5
Msa0303530 AT3G53680.2 33.333 132 70 2 13 144 172 285 1.26e-14 75.5
Msa0303530 AT5G59830.3 31.783 129 69 2 16 144 283 392 1.86e-14 74.3
Msa0303530 AT5G59830.1 31.783 129 69 2 16 144 283 392 1.86e-14 74.3
Msa0303530 AT5G59830.2 31.783 129 69 2 16 144 283 392 1.86e-14 74.3
Msa0303530 AT2G36720.1 31.944 144 82 2 24 167 261 388 2.52e-14 74.7
Msa0303530 AT2G36720.2 31.944 144 82 2 24 167 261 388 2.52e-14 74.7
Msa0303530 AT2G37520.1 30.328 122 67 2 23 144 172 275 2.54e-11 65.5

Find 177 sgRNAs with CRISPR-Local

Find 513 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATGTATGAGGTTGTTTC+TGG 0.192728 2_3:+60716344 Msa0303530:five_prime_UTR
GACATATCTTGTGTAAATTA+TGG 0.198808 2_3:+60723354 Msa0303530:three_prime_UTR
TTTATTTATTTCAGATATTC+AGG 0.221030 2_3:+60717790 Msa0303530:intron
AACTTTAGACTGATAAAATA+AGG 0.225784 2_3:-60723446 None:intergenic
TCTTCTTGCTACTGGGATTC+TGG 0.235279 2_3:+60718267 Msa0303530:CDS
GTTTCTGGTTGTGGCTTAAC+TGG 0.237073 2_3:+60716359 Msa0303530:five_prime_UTR
TGTTGATATTGGGTGGGCTT+TGG 0.261881 2_3:-60716180 None:intergenic
GTTGATATTGGGTGGGCTTT+GGG 0.267260 2_3:-60716179 None:intergenic
TGTTTCAAGTAATGCATCTA+AGG 0.270395 2_3:+60721437 Msa0303530:CDS
GGATGGTTGCATGTTGATAT+TGG 0.276730 2_3:-60716191 None:intergenic
TTAAAACGTTTGACGAATTT+CGG 0.280561 2_3:+60716826 Msa0303530:five_prime_UTR
GCTGTTTGGAAAACTGATTA+TGG 0.283222 2_3:+60716619 Msa0303530:five_prime_UTR
TAATTTAATGCAGGTTTATC+AGG 0.284330 2_3:+60723226 Msa0303530:intron
TTGTGGCTTAACTGGTAATT+AGG 0.292612 2_3:+60716367 Msa0303530:five_prime_UTR
TGTAATACCTCTAATATTCT+TGG 0.296263 2_3:-60720469 None:intergenic
GATGGTTGCATGTTGATATT+GGG 0.306220 2_3:-60716190 None:intergenic
AGAGGACGCGCTCTTGGTTT+CGG 0.309605 2_3:+60720387 Msa0303530:CDS
TAGTTATGACTGTACCATTT+GGG 0.310869 2_3:-60718053 None:intergenic
TGACGCAGGGGTTGAGATAA+TGG 0.326130 2_3:+60716923 Msa0303530:five_prime_UTR
ACTTCTTCCAAGAATATTAG+AGG 0.334129 2_3:+60720462 Msa0303530:CDS
GGAGAGATTGAGTTTGTATA+AGG 0.334929 2_3:-60716240 None:intergenic
CAGAACCTCTCTTCATTGTT+TGG 0.338881 2_3:-60718216 None:intergenic
TGATGTGTAGGCGCGTAAAC+CGG 0.346747 2_3:+60718438 Msa0303530:intron
TGGGAGTTGTAAGGGGAATC+AGG 0.356202 2_3:+60718513 Msa0303530:CDS
TTGTAGTTCTTCTTAAATCA+TGG 0.366299 2_3:+60723419 Msa0303530:three_prime_UTR
CTGAAGGATCTTCTTGCTAC+TGG 0.368934 2_3:+60718259 Msa0303530:CDS
ATTGGGCATGTTAAAATTGT+TGG 0.372170 2_3:+60716557 Msa0303530:five_prime_UTR
TTAATCAAGGGAAGGTTTGA+TGG 0.375410 2_3:+60716485 Msa0303530:five_prime_UTR
TGAGAGATAAAGAAAGATAT+AGG 0.376425 2_3:+60723258 Msa0303530:exon
TTCTTCAATAACTAAATCCT+TGG 0.376453 2_3:-60716898 None:intergenic
ACAAGGTGTGATCAAAGATT+CGG 0.383443 2_3:+60718474 Msa0303530:CDS
TAAAATCTCAAAGGATTAAG+TGG 0.386753 2_3:-60716214 None:intergenic
TTAGTTATGACTGTACCATT+TGG 0.389361 2_3:-60718054 None:intergenic
AGGGGAATCAGGCAAGTAAA+TGG 0.390137 2_3:+60718524 Msa0303530:CDS
GAAGCTGTGTATAAGCTGTT+TGG 0.393112 2_3:+60716605 Msa0303530:five_prime_UTR
ACTTTAGACTGATAAAATAA+GGG 0.393899 2_3:-60723445 None:intergenic
TTCTCATGGGGCTGAACCAT+TGG 0.394057 2_3:-60723303 None:intergenic
TGAAATCACCCAGGACCATT+TGG 0.395853 2_3:-60718785 None:intergenic
CAAACAATGAAGAGAGGTTC+TGG 0.397824 2_3:+60718217 Msa0303530:CDS
CGGTGTTGGAAGAGAGAAAA+GGG 0.399328 2_3:-60716261 None:intergenic
CATGTTAAAATTGTTGGACT+AGG 0.401623 2_3:+60716563 Msa0303530:five_prime_UTR
TATGAGGTTGTTTCTGGTTG+TGG 0.401944 2_3:+60716350 Msa0303530:five_prime_UTR
TGAAAATGTAGAATCATTCA+TGG 0.404321 2_3:-60720268 None:intergenic
CAGTAAGGAAGATTAAATCT+AGG 0.407334 2_3:+60716403 Msa0303530:five_prime_UTR
TCATCTACAGGTTTCAATAC+TGG 0.408228 2_3:-60716850 None:intergenic
CTGTTTGGAAAACTGATTAT+GGG 0.418430 2_3:+60716620 Msa0303530:five_prime_UTR
CAAGGTGTGATCAAAGATTC+GGG 0.420500 2_3:+60718475 Msa0303530:CDS
GATAAGCTCATTATAATTCA+AGG 0.425747 2_3:+60723501 Msa0303530:three_prime_UTR
TGGAATATTGAGCTGAAGCT+TGG 0.427209 2_3:+60716428 Msa0303530:five_prime_UTR
TGCAGGTTTATCAGGAGAAA+AGG 0.428315 2_3:+60723234 Msa0303530:intron
TATCCTAGGTAATTTCTAGT+AGG 0.431469 2_3:+60717991 Msa0303530:five_prime_UTR
CAAAACTTCGAATATGAAAG+AGG 0.432242 2_3:-60716297 None:intergenic
TGAAGAGAGGTTCTGGTAAG+AGG 0.433762 2_3:+60718224 Msa0303530:CDS
TGGGTGAAAAGATGAAGATT+AGG 0.435134 2_3:-60716160 None:intergenic
TGAGAATGGAAAACCCCTTC+GGG 0.436511 2_3:+60718710 Msa0303530:CDS
AGAAGATCCTTCAGCTTGAC+AGG 0.436708 2_3:-60718250 None:intergenic
GAACAAGAGCTTGTTAATCA+AGG 0.438458 2_3:+60716472 Msa0303530:five_prime_UTR
CGTATGATTGTTGAACTGAT+TGG 0.444379 2_3:+60716539 Msa0303530:five_prime_UTR
AGGGAGGTTGCCGAGAGAGA+TGG 0.448953 2_3:-60716131 None:intergenic
TAGTTTCCGCAAAATGTTTG+AGG 0.454780 2_3:+60716976 Msa0303530:five_prime_UTR
AAAAGAAGAGGACGCGCTCT+TGG 0.456495 2_3:+60720381 Msa0303530:CDS
GGCGCGTAAACCGGGAGAAA+AGG 0.458730 2_3:+60718447 Msa0303530:intron
GCATCTAAGGGTTCTTCGAT+TGG 0.459590 2_3:+60721450 Msa0303530:CDS
GATGTGTAGGCGCGTAAACC+GGG 0.460301 2_3:+60718439 Msa0303530:intron
AACTGGTAATTAGGAGCAAA+GGG 0.461518 2_3:+60716376 Msa0303530:five_prime_UTR
CGTACTTTAAAATCATCTAC+AGG 0.464192 2_3:-60716862 None:intergenic
GGAATATTGAGCTGAAGCTT+GGG 0.465466 2_3:+60716429 Msa0303530:five_prime_UTR
ATCCAACGGAAGACTTGAAC+AGG 0.468127 2_3:-60718745 None:intergenic
TCAGCTTCTTAGAGAGAGAA+TGG 0.468966 2_3:-60716095 None:intergenic
CAGGTTACTAGACGACAAAA+TGG 0.476703 2_3:+60717809 Msa0303530:five_prime_UTR
ACACTGGCGTGAACTTCATA+TGG 0.479504 2_3:-60717861 None:intergenic
GAAGATTAGGATGGGGAGGG+AGG 0.479742 2_3:-60716147 None:intergenic
ATTGGATAAAGTGGTCCAAA+TGG 0.481017 2_3:+60718770 Msa0303530:CDS
GAAGCTTGGGAATTGCTTGA+AGG 0.482052 2_3:+60716442 Msa0303530:five_prime_UTR
GAGATATGTCAAGGGACAAA+AGG 0.483260 2_3:+60718303 Msa0303530:CDS
TACGAGTTTGTTCTGATCCA+AGG 0.483469 2_3:+60716881 Msa0303530:five_prime_UTR
GATGATAAGAACAAGGCATC+AGG 0.484160 2_3:+60720192 Msa0303530:CDS
TCGGTGTTGGAAGAGAGAAA+AGG 0.486138 2_3:-60716262 None:intergenic
AGATGAAGATTAGGATGGGG+AGG 0.487153 2_3:-60716151 None:intergenic
AGTAAGGAAGATTAAATCTA+GGG 0.488065 2_3:+60716404 Msa0303530:five_prime_UTR
TTGAGAATGGAAAACCCCTT+CGG 0.491236 2_3:+60718709 Msa0303530:CDS
ACACCCAAGAAGAGAAAAGA+AGG 0.493070 2_3:+60720318 Msa0303530:CDS
ATGTGTGTTAAACTTGGTAT+TGG 0.493700 2_3:-60717962 None:intergenic
GTTAACAGTTATTAATGAGT+TGG 0.494746 2_3:+60718121 Msa0303530:five_prime_UTR
TCAGTGCATGGAACAATTGA+CGG 0.496206 2_3:+60721345 Msa0303530:CDS
CGCCAGTGTTATTATTTCAG+AGG 0.496650 2_3:+60717875 Msa0303530:five_prime_UTR
ATGTTAAAATTGTTGGACTA+GGG 0.497849 2_3:+60716564 Msa0303530:five_prime_UTR
AATAATGCTTAAAATGTATG+AGG 0.499483 2_3:+60716334 Msa0303530:five_prime_UTR
GTCAGAAGAAGAGAGAGAGA+TGG 0.500808 2_3:-60718194 None:intergenic
GTATGATTGTTGAACTGATT+GGG 0.501319 2_3:+60716540 Msa0303530:five_prime_UTR
AAGTCTTCCGTTGGATACAT+TGG 0.504489 2_3:+60718752 Msa0303530:CDS
ATATATAGTCACAGTGGACC+TGG 0.505154 2_3:+60721383 Msa0303530:CDS
TCTCTCTCCTCCATCTCTCT+CGG 0.505307 2_3:+60716121 Msa0303530:five_prime_UTR
GAGTATACTTACCTTGAGAA+TGG 0.507044 2_3:+60718696 Msa0303530:CDS
TGAAAAGATGAAGATTAGGA+TGG 0.507359 2_3:-60716156 None:intergenic
TCTAAGGGTTCTTCGATTGG+AGG 0.509350 2_3:+60721453 Msa0303530:CDS
GGTTGCATGTTGATATTGGG+TGG 0.510332 2_3:-60716187 None:intergenic
TAAAGTGGTCCAAATGGTCC+TGG 0.511290 2_3:+60718776 Msa0303530:CDS
GTTGGATACATTGGATAAAG+TGG 0.521620 2_3:+60718761 Msa0303530:CDS
AGGAAGATTAAATCTAGGGC+TGG 0.522502 2_3:+60716408 Msa0303530:five_prime_UTR
TCTAGCATGTGTGTTAAACT+TGG 0.522900 2_3:-60717968 None:intergenic
GTCTAAAGTTAATCAATGAA+TGG 0.523205 2_3:+60723459 Msa0303530:three_prime_UTR
TACTGATCATCATCAGAAAG+AGG 0.525133 2_3:+60720233 Msa0303530:CDS
AACAAGAGCTTGTTAATCAA+GGG 0.526044 2_3:+60716473 Msa0303530:five_prime_UTR
CTCAAAGGATTAAGTGGGGA+TGG 0.527193 2_3:-60716208 None:intergenic
CGAATATGAAAGAGGGAAAG+AGG 0.528854 2_3:-60716289 None:intergenic
GGAGCAAAGGGATAGCAGTA+AGG 0.531154 2_3:+60716388 Msa0303530:five_prime_UTR
TGCCTGTTCAAGTCTTCCGT+TGG 0.532331 2_3:+60718743 Msa0303530:CDS
GTTGCATGTTGATATTGGGT+GGG 0.534474 2_3:-60716186 None:intergenic
TAGTGCTAATAAACGTCCTC+CGG 0.534619 2_3:+60718674 Msa0303530:CDS
GAAAAGATGAAGATTAGGAT+GGG 0.536461 2_3:-60716155 None:intergenic
GAAGCTAAAACAACTTCTGC+AGG 0.536662 2_3:+60720345 Msa0303530:CDS
AAAATCTCAAAGGATTAAGT+GGG 0.540092 2_3:-60716213 None:intergenic
TGAAGGATCTTCTTGCTACT+GGG 0.540212 2_3:+60718260 Msa0303530:CDS
TAACTGGTAATTAGGAGCAA+AGG 0.540679 2_3:+60716375 Msa0303530:five_prime_UTR
ATCCTAGGTAATTTCTAGTA+GGG 0.540858 2_3:+60717992 Msa0303530:five_prime_UTR
ATTGAAAGTGAGATATGTCA+AGG 0.555285 2_3:+60718294 Msa0303530:CDS
ACACACATGCTAGATATCCT+AGG 0.557458 2_3:+60717977 Msa0303530:five_prime_UTR
AATATCTGTTTCAATTGCAG+AGG 0.558496 2_3:+60718822 Msa0303530:CDS
AGAGCTTGTTAATCAAGGGA+AGG 0.567919 2_3:+60716477 Msa0303530:five_prime_UTR
CCGGGAGAAAAGGATTTACA+AGG 0.568192 2_3:+60718457 Msa0303530:CDS
GAATATGAAAGAGGGAAAGA+GGG 0.569378 2_3:-60716288 None:intergenic
GTTTCAAGTAATGCATCTAA+GGG 0.569956 2_3:+60721438 Msa0303530:CDS
GTCAATTTCTGAATCTAACA+AGG 0.573857 2_3:+60718938 Msa0303530:CDS
GATGAAGATTAGGATGGGGA+GGG 0.574527 2_3:-60716150 None:intergenic
GTTCAACAATCATACGAGCT+TGG 0.576193 2_3:-60716532 None:intergenic
AGTTATGACTGTACCATTTG+GGG 0.579606 2_3:-60718052 None:intergenic
CTTTAGACTGATAAAATAAG+GGG 0.580275 2_3:-60723444 None:intergenic
CAGTGCATGGAACAATTGAC+GGG 0.580953 2_3:+60721346 Msa0303530:CDS
ATAAGGTCTTAAAATCTCAA+AGG 0.582631 2_3:-60716223 None:intergenic
AAAAGATGAAGATTAGGATG+GGG 0.585022 2_3:-60716154 None:intergenic
CTGGGTTCTGAACAGCTGAA+AGG 0.586271 2_3:+60721402 Msa0303530:CDS
ATGGCAATATTATAGAGTTG+AGG 0.589764 2_3:-60723791 None:intergenic
CAGGCAAGTAAATGGAGGGA+TGG 0.589865 2_3:+60718532 Msa0303530:CDS
GAGGTTGCCGAGAGAGATGG+AGG 0.590668 2_3:-60716128 None:intergenic
GTTATTGAAGAATTTGACGC+AGG 0.592049 2_3:+60716909 Msa0303530:five_prime_UTR
GGCATTCATGACATCCCGAA+GGG 0.593955 2_3:-60718724 None:intergenic
GATGAAGAAGCAGAAGTCGT+TGG 0.596620 2_3:+60717837 Msa0303530:five_prime_UTR
GGAATCAGGCAAGTAAATGG+AGG 0.597083 2_3:+60718527 Msa0303530:CDS
TGAGTACACGCATGGTTCAG+AGG 0.597255 2_3:+60716509 Msa0303530:five_prime_UTR
AAAACTTCGAATATGAAAGA+GGG 0.597667 2_3:-60716296 None:intergenic
ACTGATCATCATCAGAAAGA+GGG 0.602064 2_3:+60720234 Msa0303530:CDS
GAGGTTTCCTGTCAAGCTGA+AGG 0.603772 2_3:+60718243 Msa0303530:CDS
AATATGAAAGAGGGAAAGAG+GGG 0.608138 2_3:-60716287 None:intergenic
TGCCTCTGAAATAATAACAC+TGG 0.608650 2_3:-60717877 None:intergenic
ATTTGATTTGCATGTGCAGA+GGG 0.613483 2_3:-60718171 None:intergenic
AAAGTGGTCCAAATGGTCCT+GGG 0.615287 2_3:+60718777 Msa0303530:CDS
TTCTCAAGGTAAGTATACTC+CGG 0.616449 2_3:-60718693 None:intergenic
TTGATGGATGAGTACACGCA+TGG 0.623070 2_3:+60716501 Msa0303530:five_prime_UTR
ACTTCTTCCAAGAAAAGAAG+AGG 0.623254 2_3:+60720369 Msa0303530:CDS
ATGTTGAAGTACAAATCCAA+TGG 0.623288 2_3:+60723287 Msa0303530:three_prime_UTR
AAACTGATTATGGGAAGCTG+AGG 0.625081 2_3:+60716629 Msa0303530:five_prime_UTR
ATAATGGCAGAAGTTTAAGC+CGG 0.625994 2_3:+60716939 Msa0303530:five_prime_UTR
CTTTCAGCTGTTCAGAACCC+AGG 0.626176 2_3:-60721401 None:intergenic
ATTGACGGGAAATTTGATGA+CGG 0.626327 2_3:+60721360 Msa0303530:CDS
ACACTCGGTTCTTCAGTGCA+TGG 0.628634 2_3:+60721333 Msa0303530:CDS
TCTGACCAAACAATGAAGAG+AGG 0.630683 2_3:+60718211 Msa0303530:CDS
ATTAGTCCAGCACAGACACT+CGG 0.635032 2_3:+60721318 Msa0303530:intron
GAATCAGGCAAGTAAATGGA+GGG 0.637456 2_3:+60718528 Msa0303530:CDS
TATATAGTCACAGTGGACCT+GGG 0.638161 2_3:+60721384 Msa0303530:CDS
TTGAAAGTGAGATATGTCAA+GGG 0.640541 2_3:+60718295 Msa0303530:CDS
TTATTGAAGAATTTGACGCA+GGG 0.643969 2_3:+60716910 Msa0303530:five_prime_UTR
CACCCTACTAGAAATTACCT+AGG 0.648151 2_3:-60717994 None:intergenic
AGGCATTCATGACATCCCGA+AGG 0.658440 2_3:-60718725 None:intergenic
ACTTTATCCAATGTATCCAA+CGG 0.659425 2_3:-60718759 None:intergenic
TATTGAAGAATTTGACGCAG+GGG 0.662300 2_3:+60716911 Msa0303530:five_prime_UTR
TCAATTTCTGAATCTAACAA+GGG 0.662842 2_3:+60718939 Msa0303530:CDS
GATTTGATTTGCATGTGCAG+AGG 0.664606 2_3:-60718172 None:intergenic
GGAGGAGGATGATAAGAACA+AGG 0.665193 2_3:+60720185 Msa0303530:CDS
TATGAAAGAGGGAAAGAGGG+GGG 0.680128 2_3:-60716285 None:intergenic
ATATGAAAGAGGGAAAGAGG+GGG 0.681399 2_3:-60716286 None:intergenic
AAATCTCAAAGGATTAAGTG+GGG 0.693569 2_3:-60716212 None:intergenic
GCATTCATGACATCCCGAAG+GGG 0.694831 2_3:-60718723 None:intergenic
TCAAGGTAAGTATACTCCGG+AGG 0.704070 2_3:-60718690 None:intergenic
ATATCTTGTGTAAATTATGG+CGG 0.719589 2_3:+60723357 Msa0303530:three_prime_UTR
TCTGCATAGTGAAATCACCC+AGG 0.720378 2_3:-60718794 None:intergenic
TGACGGATATATAGTCACAG+TGG 0.767267 2_3:+60721377 Msa0303530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATCTGAAATAAATAAAA+GGG - chr2_3:60717789-60717808 None:intergenic 10.0%
!! TAAAATTAGTAATATATGTA+TGG + chr2_3:60722226-60722245 Msa0303530:intron 10.0%
!!! ATAAATCTATAAATGTTTTA+AGG - chr2_3:60722538-60722557 None:intergenic 10.0%
!!! GAATATCTGAAATAAATAAA+AGG - chr2_3:60717790-60717809 None:intergenic 15.0%
!! TTTATTTATTTCAGATATTC+AGG + chr2_3:60717790-60717809 Msa0303530:intron 15.0%
!!! AACTTTAAAGGATTTTTAAA+TGG + chr2_3:60718099-60718118 Msa0303530:five_prime_UTR 15.0%
!!! TTGTTTTGAAATTTTGATTT+TGG + chr2_3:60718330-60718349 Msa0303530:intron 15.0%
!!! AGTTTTTTTTTTCTTTTTTG+TGG + chr2_3:60718384-60718403 Msa0303530:intron 15.0%
!!! ATTTGTTATGTATAACATAT+TGG + chr2_3:60719198-60719217 Msa0303530:intron 15.0%
!!! TTTGTTATGTATAACATATT+GGG + chr2_3:60719199-60719218 Msa0303530:intron 15.0%
!!! TGAAATTTTGAATTATTGTA+AGG - chr2_3:60721651-60721670 None:intergenic 15.0%
!!! TTCAAGAATTTTTATAAGAT+CGG + chr2_3:60721817-60721836 Msa0303530:intron 15.0%
!!! TGATTTTAAGAAGAAAAAAA+AGG + chr2_3:60721891-60721910 Msa0303530:intron 15.0%
!!! GATTTTAAGAAGAAAAAAAA+GGG + chr2_3:60721892-60721911 Msa0303530:intron 15.0%
!! AACATTTATAGATTTATTGT+TGG + chr2_3:60722541-60722560 Msa0303530:intron 15.0%
!!! TTATTTTGTTAATTTAATGC+AGG + chr2_3:60723217-60723236 Msa0303530:intron 15.0%
!! AATAATGCTTAAAATGTATG+AGG + chr2_3:60716334-60716353 Msa0303530:five_prime_UTR 20.0%
!! AATCATAATTGAGCAATTAT+TGG + chr2_3:60716702-60716721 Msa0303530:intron 20.0%
!! TTATGCAAAATCATATGAAT+TGG + chr2_3:60717122-60717141 Msa0303530:intron 20.0%
!! ACTTATAGAAATGATTTGAA+AGG + chr2_3:60717185-60717204 Msa0303530:intron 20.0%
!! TGAAATAAATAAAAGGGATT+GGG - chr2_3:60717783-60717802 None:intergenic 20.0%
!!! AATTTTCATATCTTATTCAG+AGG + chr2_3:60717910-60717929 Msa0303530:five_prime_UTR 20.0%
!! ATACCAAAAAAGAACTTTAA+AGG + chr2_3:60718087-60718106 Msa0303530:five_prime_UTR 20.0%
!!! AATCCTTTAAAGTTCTTTTT+TGG - chr2_3:60718093-60718112 None:intergenic 20.0%
!! AAATTACATGTTTAATCAAC+AGG - chr2_3:60718900-60718919 None:intergenic 20.0%
!! AACAAATAAAAAAGATACCT+GGG - chr2_3:60719071-60719090 None:intergenic 20.0%
!! TAACAAATAAAAAAGATACC+TGG - chr2_3:60719072-60719091 None:intergenic 20.0%
!!! TACAAAATTTTGTCAAATTG+CGG + chr2_3:60719164-60719183 Msa0303530:intron 20.0%
!! ATTATGAGACAAACAAAATA+TGG + chr2_3:60719807-60719826 Msa0303530:intron 20.0%
!! TTATGAGACAAACAAAATAT+GGG + chr2_3:60719808-60719827 Msa0303530:intron 20.0%
!!! TATAATATTTTTCTGTGATG+TGG + chr2_3:60720635-60720654 Msa0303530:intron 20.0%
!!! TCTTTTCTTTAATTTAGACT+TGG + chr2_3:60720796-60720815 Msa0303530:intron 20.0%
!!! TTCAAAAGCATAAAAAGAAA+TGG - chr2_3:60721559-60721578 None:intergenic 20.0%
!!! TTTCTTTTTATGCTTTTGAA+TGG + chr2_3:60721559-60721578 Msa0303530:intron 20.0%
!! CAATTCTACTTATGAAAAAA+TGG + chr2_3:60722795-60722814 Msa0303530:intron 20.0%
!!! TCTTAGTTCTATATGAAAAT+AGG + chr2_3:60722820-60722839 Msa0303530:intron 20.0%
!!! CTTAGTTCTATATGAAAATA+GGG + chr2_3:60722821-60722840 Msa0303530:intron 20.0%
!! ACTTTAGACTGATAAAATAA+GGG - chr2_3:60723448-60723467 None:intergenic 20.0%
!! AACTTTAGACTGATAAAATA+AGG - chr2_3:60723449-60723468 None:intergenic 20.0%
! AAAATCTCAAAGGATTAAGT+GGG - chr2_3:60716216-60716235 None:intergenic 25.0%
! TAAAATCTCAAAGGATTAAG+TGG - chr2_3:60716217-60716236 None:intergenic 25.0%
! ATAAGGTCTTAAAATCTCAA+AGG - chr2_3:60716226-60716245 None:intergenic 25.0%
! AAAACTTCGAATATGAAAGA+GGG - chr2_3:60716299-60716318 None:intergenic 25.0%
! AGTAAGGAAGATTAAATCTA+GGG + chr2_3:60716404-60716423 Msa0303530:five_prime_UTR 25.0%
! ATGTTAAAATTGTTGGACTA+GGG + chr2_3:60716564-60716583 Msa0303530:five_prime_UTR 25.0%
! TGTTGAGTTCTGTTATTATT+TGG + chr2_3:60716659-60716678 Msa0303530:intron 25.0%
! GTTGAGTTCTGTTATTATTT+GGG + chr2_3:60716660-60716679 Msa0303530:intron 25.0%
!! AAATTCGTCAAACGTTTTAA+TGG - chr2_3:60716826-60716845 None:intergenic 25.0%
! TTAAAACGTTTGACGAATTT+CGG + chr2_3:60716826-60716845 Msa0303530:five_prime_UTR 25.0%
! TTCTTCAATAACTAAATCCT+TGG - chr2_3:60716901-60716920 None:intergenic 25.0%
! AAAGAAATGATTCGAACTAA+AGG - chr2_3:60717008-60717027 None:intergenic 25.0%
!! CAATACAAACGAGATTTTAA+TGG + chr2_3:60717052-60717071 Msa0303530:intron 25.0%
! GATAGAATGATGATAGTATT+AGG + chr2_3:60717608-60717627 Msa0303530:intron 25.0%
! GAAATAAATAAAAGGGATTG+GGG - chr2_3:60717782-60717801 None:intergenic 25.0%
! CTGAAATAAATAAAAGGGAT+TGG - chr2_3:60717784-60717803 None:intergenic 25.0%
!! TTTTCAAAATAATCCCCAAA+TGG + chr2_3:60718039-60718058 Msa0303530:five_prime_UTR 25.0%
! GTTAACAGTTATTAATGAGT+TGG + chr2_3:60718121-60718140 Msa0303530:five_prime_UTR 25.0%
!!! TTATTGTTTTTTTGCTTGTG+TGG + chr2_3:60718555-60718574 Msa0303530:intron 25.0%
!!! TATTGTTTTTTTGCTTGTGT+GGG + chr2_3:60718556-60718575 Msa0303530:intron 25.0%
!!! AATTTTGATGAACTGTTTGT+AGG + chr2_3:60718915-60718934 Msa0303530:intron 25.0%
!!! ATTTTGATGAACTGTTTGTA+GGG + chr2_3:60718916-60718935 Msa0303530:intron 25.0%
! TCAATTTCTGAATCTAACAA+GGG + chr2_3:60718939-60718958 Msa0303530:CDS 25.0%
! TGTAATGACATAATGTTTGT+CGG + chr2_3:60719290-60719309 Msa0303530:intron 25.0%
! GACGTTAAATAAAACAATAC+AGG - chr2_3:60719366-60719385 None:intergenic 25.0%
!! TTTTGTATGTTAGAAGCAAT+AGG - chr2_3:60719720-60719739 None:intergenic 25.0%
! TATGAGACAAACAAAATATG+GGG + chr2_3:60719809-60719828 Msa0303530:intron 25.0%
! TAGCTTTCATAAGCATAAAA+AGG + chr2_3:60719917-60719936 Msa0303530:intron 25.0%
! TAATTTATAGGTCGTGAAAT+TGG + chr2_3:60719949-60719968 Msa0303530:intron 25.0%
! TGAAAATGTAGAATCATTCA+TGG - chr2_3:60720271-60720290 None:intergenic 25.0%
!! TTCTACATTTTCATTGCAAT+TGG + chr2_3:60720278-60720297 Msa0303530:CDS 25.0%
! TCAAAAAATAAGAGAGAAGA+AGG + chr2_3:60720411-60720430 Msa0303530:CDS 25.0%
! TGTAATACCTCTAATATTCT+TGG - chr2_3:60720472-60720491 None:intergenic 25.0%
!!! GATATTTGATTGACTTCTTT+TGG + chr2_3:60720677-60720696 Msa0303530:intron 25.0%
!!! TGATTCTTTTGTTTTGAAAC+TGG + chr2_3:60720740-60720759 Msa0303530:intron 25.0%
! AGAAAAGAATCATCTATGAA+TGG - chr2_3:60720784-60720803 None:intergenic 25.0%
! AACAAAGTTCTTATCTATGT+TGG + chr2_3:60721232-60721251 Msa0303530:intron 25.0%
!! ATATACTTTTCGTTTATGTC+TGG + chr2_3:60721262-60721281 Msa0303530:intron 25.0%
!! ATATCTGGAATAGTTTATTC+AGG + chr2_3:60722145-60722164 Msa0303530:intron 25.0%
! GTTACAAATAATTGATCACT+AGG - chr2_3:60722425-60722444 None:intergenic 25.0%
! AAAAGACAACATGATAACTA+TGG - chr2_3:60722638-60722657 None:intergenic 25.0%
!!! AGACCTAACTATTTTTCTAT+TGG + chr2_3:60722695-60722714 Msa0303530:intron 25.0%
! AAGCCAATAGAAAAATAGTT+AGG - chr2_3:60722701-60722720 None:intergenic 25.0%
! AGGGCTATAATATAATAGTA+AGG + chr2_3:60722840-60722859 Msa0303530:intron 25.0%
! TCTTCGAATTAATTAGTATG+CGG + chr2_3:60722886-60722905 Msa0303530:intron 25.0%
! AAGTTGCATAATGATATGAA+TGG - chr2_3:60722939-60722958 None:intergenic 25.0%
!!! TAGAACTTGGTCTTATATTT+TGG + chr2_3:60723166-60723185 Msa0303530:intron 25.0%
! TAATTTAATGCAGGTTTATC+AGG + chr2_3:60723226-60723245 Msa0303530:intron 25.0%
! TGAGAGATAAAGAAAGATAT+AGG + chr2_3:60723258-60723277 Msa0303530:exon 25.0%
! GACATATCTTGTGTAAATTA+TGG + chr2_3:60723354-60723373 Msa0303530:three_prime_UTR 25.0%
! ATATCTTGTGTAAATTATGG+CGG + chr2_3:60723357-60723376 Msa0303530:three_prime_UTR 25.0%
! TTGTAGTTCTTCTTAAATCA+TGG + chr2_3:60723419-60723438 Msa0303530:three_prime_UTR 25.0%
! CTTTAGACTGATAAAATAAG+GGG - chr2_3:60723447-60723466 None:intergenic 25.0%
!! GTCTAAAGTTAATCAATGAA+TGG + chr2_3:60723459-60723478 Msa0303530:three_prime_UTR 25.0%
! GATAAGCTCATTATAATTCA+AGG + chr2_3:60723501-60723520 Msa0303530:three_prime_UTR 25.0%
AAAAGATGAAGATTAGGATG+GGG - chr2_3:60716157-60716176 None:intergenic 30.0%
GAAAAGATGAAGATTAGGAT+GGG - chr2_3:60716158-60716177 None:intergenic 30.0%
TGAAAAGATGAAGATTAGGA+TGG - chr2_3:60716159-60716178 None:intergenic 30.0%
AAATCTCAAAGGATTAAGTG+GGG - chr2_3:60716215-60716234 None:intergenic 30.0%
CAAAACTTCGAATATGAAAG+AGG - chr2_3:60716300-60716319 None:intergenic 30.0%
! AAAATGTATGAGGTTGTTTC+TGG + chr2_3:60716344-60716363 Msa0303530:five_prime_UTR 30.0%
CAGTAAGGAAGATTAAATCT+AGG + chr2_3:60716403-60716422 Msa0303530:five_prime_UTR 30.0%
!! AACAAGAGCTTGTTAATCAA+GGG + chr2_3:60716473-60716492 Msa0303530:five_prime_UTR 30.0%
GTATGATTGTTGAACTGATT+GGG + chr2_3:60716540-60716559 Msa0303530:five_prime_UTR 30.0%
ATTGGGCATGTTAAAATTGT+TGG + chr2_3:60716557-60716576 Msa0303530:five_prime_UTR 30.0%
CATGTTAAAATTGTTGGACT+AGG + chr2_3:60716563-60716582 Msa0303530:five_prime_UTR 30.0%
CTGTTTGGAAAACTGATTAT+GGG + chr2_3:60716620-60716639 Msa0303530:five_prime_UTR 30.0%
AAACTTATAGCCGAATTGAA+GGG - chr2_3:60716751-60716770 None:intergenic 30.0%
!! AATGCTGTAATTTGTTTACG+CGG + chr2_3:60716783-60716802 Msa0303530:intron 30.0%
!! CGTACTTTAAAATCATCTAC+AGG - chr2_3:60716865-60716884 None:intergenic 30.0%
TTATTGAAGAATTTGACGCA+GGG + chr2_3:60716910-60716929 Msa0303530:five_prime_UTR 30.0%
!! ACCACGTTATCTTTTAGTTA+TGG - chr2_3:60717487-60717506 None:intergenic 30.0%
AAGACTGTATAAATCCGAAA+TGG + chr2_3:60717673-60717692 Msa0303530:intron 30.0%
AGACTGTATAAATCCGAAAT+GGG + chr2_3:60717674-60717693 Msa0303530:intron 30.0%
ATGTGTGTTAAACTTGGTAT+TGG - chr2_3:60717965-60717984 None:intergenic 30.0%
!! TATCCTAGGTAATTTCTAGT+AGG + chr2_3:60717991-60718010 Msa0303530:five_prime_UTR 30.0%
!! ATCCTAGGTAATTTCTAGTA+GGG + chr2_3:60717992-60718011 Msa0303530:five_prime_UTR 30.0%
TAGTTATGACTGTACCATTT+GGG - chr2_3:60718056-60718075 None:intergenic 30.0%
TTAGTTATGACTGTACCATT+TGG - chr2_3:60718057-60718076 None:intergenic 30.0%
ATTGAAAGTGAGATATGTCA+AGG + chr2_3:60718294-60718313 Msa0303530:CDS 30.0%
TTGAAAGTGAGATATGTCAA+GGG + chr2_3:60718295-60718314 Msa0303530:CDS 30.0%
GTGAAATTGTGAATGATGTT+AGG + chr2_3:60718361-60718380 Msa0303530:intron 30.0%
TTTATTCGTGAATGATGTGT+AGG + chr2_3:60718426-60718445 Msa0303530:intron 30.0%
!!! TGTTGTTTTTTGTTGAGAGT+AGG + chr2_3:60718617-60718636 Msa0303530:intron 30.0%
ACTTTATCCAATGTATCCAA+CGG - chr2_3:60718762-60718781 None:intergenic 30.0%
AATATCTGTTTCAATTGCAG+AGG + chr2_3:60718822-60718841 Msa0303530:CDS 30.0%
GTCAATTTCTGAATCTAACA+AGG + chr2_3:60718938-60718957 Msa0303530:CDS 30.0%
! TGTGGTAATACTTTTACTAC+AGG - chr2_3:60719039-60719058 None:intergenic 30.0%
GTAACAGTAAGGATCTAAAA+TGG - chr2_3:60719316-60719335 None:intergenic 30.0%
! TTTTAGCGTAAGTAACAGTA+AGG - chr2_3:60719327-60719346 None:intergenic 30.0%
TTACTTACGCTAAAATCAGA+AGG + chr2_3:60719332-60719351 Msa0303530:intron 30.0%
TAACCCTATCACACTTAATA+CGG + chr2_3:60719513-60719532 Msa0303530:intron 30.0%
!!! TTTGTTTTTTCTTCCTGTTC+TGG - chr2_3:60719662-60719681 None:intergenic 30.0%
AGGACACCAAAGTAATTTAT+AGG + chr2_3:60719937-60719956 Msa0303530:intron 30.0%
TCACGACCTATAAATTACTT+TGG - chr2_3:60719946-60719965 None:intergenic 30.0%
TTGTTCTTGTAGCCAAAAAA+TGG + chr2_3:60720164-60720183 Msa0303530:CDS 30.0%
ACTTCTTCCAAGAATATTAG+AGG + chr2_3:60720462-60720481 Msa0303530:CDS 30.0%
GGACGTATAGTCAATATTAT+TGG - chr2_3:60720541-60720560 None:intergenic 30.0%
TCTATCATAAGTTGTGTTGA+TGG - chr2_3:60720871-60720890 None:intergenic 30.0%
ATTATGACATCGTTTGATCT+GGG + chr2_3:60720893-60720912 Msa0303530:intron 30.0%
! TGTTTCAAGTAATGCATCTA+AGG + chr2_3:60721437-60721456 Msa0303530:CDS 30.0%
! GTTTCAAGTAATGCATCTAA+GGG + chr2_3:60721438-60721457 Msa0303530:CDS 30.0%
CATACAAAAGAAATCACGAT+TGG + chr2_3:60721491-60721510 Msa0303530:intron 30.0%
TATATCGACCGAAATCAAAT+AGG + chr2_3:60721525-60721544 Msa0303530:intron 30.0%
! TAACCACTCCTATTTGATTT+CGG - chr2_3:60721536-60721555 None:intergenic 30.0%
! ATGCTTTTGAATGGCTTATT+TGG + chr2_3:60721568-60721587 Msa0303530:intron 30.0%
GTTAAGAAACCAACAAGAAA+GGG - chr2_3:60721953-60721972 None:intergenic 30.0%
AGTTAAGAAACCAACAAGAA+AGG - chr2_3:60721954-60721973 None:intergenic 30.0%
GGAAAGGTTAATTGTATATC+TGG + chr2_3:60722130-60722149 Msa0303530:intron 30.0%
AATAGTTTATTCAGGCACAT+AGG + chr2_3:60722153-60722172 Msa0303530:intron 30.0%
! TAGGCATTTTCTTTCATTTC+AGG + chr2_3:60722172-60722191 Msa0303530:intron 30.0%
! AAAGCAGTGTTGTTAAATAG+AGG + chr2_3:60722325-60722344 Msa0303530:intron 30.0%
!!! TTTTCTATTGGCTTCTTAAG+AGG + chr2_3:60722707-60722726 Msa0303530:intron 30.0%
!! TGACATAGACTATTTCTACA+GGG - chr2_3:60722736-60722755 None:intergenic 30.0%
!! TTGACATAGACTATTTCTAC+AGG - chr2_3:60722737-60722756 None:intergenic 30.0%
TGTAGAAATAGTCTATGTCA+AGG + chr2_3:60722736-60722755 Msa0303530:intron 30.0%
AGTCTATGTCAAGGAATATT+AGG + chr2_3:60722745-60722764 Msa0303530:intron 30.0%
ATGTTGAAGTACAAATCCAA+TGG + chr2_3:60723287-60723306 Msa0303530:three_prime_UTR 30.0%
! TAAGCTATCTGTTTTCTCAT+GGG - chr2_3:60723319-60723338 None:intergenic 30.0%
ATTCCAACTCATTAGTATCT+AGG + chr2_3:60723631-60723650 Msa0303530:intron 30.0%
ATCTAGAAAAACTATCAGAG+AGG - chr2_3:60723670-60723689 None:intergenic 30.0%
GTAAAAATAACATCAAGTGG+AGG - chr2_3:60723721-60723740 None:intergenic 30.0%
GTGGTAAAAATAACATCAAG+TGG - chr2_3:60723724-60723743 None:intergenic 30.0%
! ATTTTTACCACAGAATCTAC+AGG + chr2_3:60723733-60723752 Msa0303530:intron 30.0%
TGGGTGAAAAGATGAAGATT+AGG - chr2_3:60716163-60716182 None:intergenic 35.0%
GATGGTTGCATGTTGATATT+GGG - chr2_3:60716193-60716212 None:intergenic 35.0%
GGAGAGATTGAGTTTGTATA+AGG - chr2_3:60716243-60716262 None:intergenic 35.0%
AATATGAAAGAGGGAAAGAG+GGG - chr2_3:60716290-60716309 None:intergenic 35.0%
GAATATGAAAGAGGGAAAGA+GGG - chr2_3:60716291-60716310 None:intergenic 35.0%
TTGTGGCTTAACTGGTAATT+AGG + chr2_3:60716367-60716386 Msa0303530:five_prime_UTR 35.0%
TAACTGGTAATTAGGAGCAA+AGG + chr2_3:60716375-60716394 Msa0303530:five_prime_UTR 35.0%
AACTGGTAATTAGGAGCAAA+GGG + chr2_3:60716376-60716395 Msa0303530:five_prime_UTR 35.0%
!! GAACAAGAGCTTGTTAATCA+AGG + chr2_3:60716472-60716491 Msa0303530:five_prime_UTR 35.0%
TTAATCAAGGGAAGGTTTGA+TGG + chr2_3:60716485-60716504 Msa0303530:five_prime_UTR 35.0%
CGTATGATTGTTGAACTGAT+TGG + chr2_3:60716539-60716558 Msa0303530:five_prime_UTR 35.0%
GCTGTTTGGAAAACTGATTA+TGG + chr2_3:60716619-60716638 Msa0303530:five_prime_UTR 35.0%
GAAACTTATAGCCGAATTGA+AGG - chr2_3:60716752-60716771 None:intergenic 35.0%
!! ATGCTGTAATTTGTTTACGC+GGG + chr2_3:60716784-60716803 Msa0303530:intron 35.0%
TCATCTACAGGTTTCAATAC+TGG - chr2_3:60716853-60716872 None:intergenic 35.0%
GTTATTGAAGAATTTGACGC+AGG + chr2_3:60716909-60716928 Msa0303530:five_prime_UTR 35.0%
TATTGAAGAATTTGACGCAG+GGG + chr2_3:60716911-60716930 Msa0303530:five_prime_UTR 35.0%
ATAATGGCAGAAGTTTAAGC+CGG + chr2_3:60716939-60716958 Msa0303530:five_prime_UTR 35.0%
! AACTAAACTCAGCTTTTCTC+CGG - chr2_3:60716961-60716980 None:intergenic 35.0%
TAGTTTCCGCAAAATGTTTG+AGG + chr2_3:60716976-60716995 Msa0303530:five_prime_UTR 35.0%
! AACTCACCTCAAACATTTTG+CGG - chr2_3:60716985-60717004 None:intergenic 35.0%
TATCTCTTCGTTGTAGCAAA+CGG - chr2_3:60717274-60717293 None:intergenic 35.0%
AAGAGATAATGTAGCCTATG+AGG + chr2_3:60717286-60717305 Msa0303530:intron 35.0%
ATAATGTAGCCTATGAGGTA+TGG + chr2_3:60717291-60717310 Msa0303530:intron 35.0%
TATCTCTTCGTTGTAGCAAA+CGG - chr2_3:60717274-60717293 None:intergenic 35.0%
AAGAGATAATGTAGCCTATG+AGG + chr2_3:60717286-60717305 Msa0303530:intron 35.0%
TATCTCTTCGTTGTAGCAAA+CGG - chr2_3:60717274-60717293 None:intergenic 35.0%
GCCATAACTAAAAGATAACG+TGG + chr2_3:60717483-60717502 Msa0303530:intron 35.0%
ATCATACATAACTGAGCGAT+CGG - chr2_3:60717652-60717671 None:intergenic 35.0%
! GTTCTAAACTCAACCCATTT+CGG - chr2_3:60717690-60717709 None:intergenic 35.0%
!! TGCCTCTGAAATAATAACAC+TGG - chr2_3:60717880-60717899 None:intergenic 35.0%
TCTAGCATGTGTGTTAAACT+TGG - chr2_3:60717971-60717990 None:intergenic 35.0%
AGTTATGACTGTACCATTTG+GGG - chr2_3:60718055-60718074 None:intergenic 35.0%
!! ATTTGATTTGCATGTGCAGA+GGG - chr2_3:60718174-60718193 None:intergenic 35.0%
ACAAGGTGTGATCAAAGATT+CGG + chr2_3:60718474-60718493 Msa0303530:CDS 35.0%
GCATGCAACTCAAAAACATT+CGG - chr2_3:60718651-60718670 None:intergenic 35.0%
!!! AATGTTTTTGAGTTGCATGC+TGG + chr2_3:60718651-60718670 Msa0303530:CDS 35.0%
TTCTCAAGGTAAGTATACTC+CGG - chr2_3:60718696-60718715 None:intergenic 35.0%
GAGTATACTTACCTTGAGAA+TGG + chr2_3:60718696-60718715 Msa0303530:CDS 35.0%
GTTGGATACATTGGATAAAG+TGG + chr2_3:60718761-60718780 Msa0303530:CDS 35.0%
ATTGGATAAAGTGGTCCAAA+TGG + chr2_3:60718770-60718789 Msa0303530:CDS 35.0%
AATTACATAGTGTCACAGCT+AGG - chr2_3:60718871-60718890 None:intergenic 35.0%
TGACCGTATTAAGTGTGATA+GGG - chr2_3:60719519-60719538 None:intergenic 35.0%
TTGACCGTATTAAGTGTGAT+AGG - chr2_3:60719520-60719539 None:intergenic 35.0%
GAAGAAACAAAGAGTTGAGA+TGG + chr2_3:60719758-60719777 Msa0303530:intron 35.0%
AGTTGAGATGGAATACTCTT+GGG + chr2_3:60719770-60719789 Msa0303530:intron 35.0%
AGACAAACAAAATATGGGGA+AGG + chr2_3:60719813-60719832 Msa0303530:intron 35.0%
CAACTCACTACTGCTTATAA+TGG - chr2_3:60719877-60719896 None:intergenic 35.0%
TTATGAAAGCTACTCTTGGA+TGG - chr2_3:60719909-60719928 None:intergenic 35.0%
ATGCTTATGAAAGCTACTCT+TGG - chr2_3:60719913-60719932 None:intergenic 35.0%
TTCTTGTAGCCAAAAAATGG+AGG + chr2_3:60720167-60720186 Msa0303530:CDS 35.0%
!!! TATCATCCTCCTCCATTTTT+TGG - chr2_3:60720179-60720198 None:intergenic 35.0%
TACTGATCATCATCAGAAAG+AGG + chr2_3:60720233-60720252 Msa0303530:CDS 35.0%
ACTGATCATCATCAGAAAGA+GGG + chr2_3:60720234-60720253 Msa0303530:CDS 35.0%
ACTTCTTCCAAGAAAAGAAG+AGG + chr2_3:60720369-60720388 Msa0303530:CDS 35.0%
!!! GCAGAAGTAGTTTTTTCAGA+AGG - chr2_3:60720438-60720457 None:intergenic 35.0%
TATACGTCCATCATGAGTTA+GGG + chr2_3:60720552-60720571 Msa0303530:intron 35.0%
ATGTATACCCTAACTCATGA+TGG - chr2_3:60720562-60720581 None:intergenic 35.0%
CATTATGACATCGTTTGATC+TGG + chr2_3:60720892-60720911 Msa0303530:intron 35.0%
ATTTACTGCCATAAGCACAT+AGG + chr2_3:60720967-60720986 Msa0303530:intron 35.0%
ATTGACGGGAAATTTGATGA+CGG + chr2_3:60721360-60721379 Msa0303530:CDS 35.0%
TTGGTCCAATTTCAATGTTC+CGG + chr2_3:60721587-60721606 Msa0303530:intron 35.0%
AAAACCCGGAACATTGAAAT+TGG - chr2_3:60721595-60721614 None:intergenic 35.0%
! ATTTCAATGTTCCGGGTTTT+TGG + chr2_3:60721595-60721614 Msa0303530:intron 35.0%
! TTTCAATGTTCCGGGTTTTT+GGG + chr2_3:60721596-60721615 Msa0303530:intron 35.0%
AAACCAACAAGAAAGGGAAA+AGG - chr2_3:60721947-60721966 None:intergenic 35.0%
GTTTCTTAACTCCCAAACAA+GGG + chr2_3:60721963-60721982 Msa0303530:intron 35.0%
AGCCTTAACATATTTGTCTC+TGG + chr2_3:60722077-60722096 Msa0303530:intron 35.0%
AGCCAGAGACAAATATGTTA+AGG - chr2_3:60722082-60722101 None:intergenic 35.0%
GCTTGTTTAACGATGATGAA+GGG + chr2_3:60722099-60722118 Msa0303530:intron 35.0%
CTTGTTTAACGATGATGAAG+GGG + chr2_3:60722100-60722119 Msa0303530:intron 35.0%
CGTTAACTTTGTTCTCTGAT+TGG + chr2_3:60722285-60722304 Msa0303530:intron 35.0%
!!! CATTTTTTGCAATCTCCGAT+CGG + chr2_3:60722388-60722407 Msa0303530:intron 35.0%
TAATTGATCACTAGGCAACA+GGG - chr2_3:60722417-60722436 None:intergenic 35.0%
ATAATTGATCACTAGGCAAC+AGG - chr2_3:60722418-60722437 None:intergenic 35.0%
! AATTGCATGAATCCCACTTT+TGG - chr2_3:60722513-60722532 None:intergenic 35.0%
TTATTGTTGGAGTCTGTGAA+AGG + chr2_3:60722554-60722573 Msa0303530:intron 35.0%
CTATGGCTACAACTAGAAAA+GGG - chr2_3:60722621-60722640 None:intergenic 35.0%
ACTATGGCTACAACTAGAAA+AGG - chr2_3:60722622-60722641 None:intergenic 35.0%
TCTGTATCTATAAAGCCTGT+GGG - chr2_3:60722678-60722697 None:intergenic 35.0%
!! GACATAGACTATTTCTACAG+GGG - chr2_3:60722735-60722754 None:intergenic 35.0%
CTATGTCAAGGAATATTAGG+AGG + chr2_3:60722748-60722767 Msa0303530:intron 35.0%
TCTATGTAGTGAGATGTGAT+TGG + chr2_3:60722995-60723014 Msa0303530:intron 35.0%
TGCTCTTATCTGTTAGAACT+TGG + chr2_3:60723153-60723172 Msa0303530:intron 35.0%
! AAGCTATCTGTTTTCTCATG+GGG - chr2_3:60723318-60723337 None:intergenic 35.0%
! CTAAGCTATCTGTTTTCTCA+TGG - chr2_3:60723320-60723339 None:intergenic 35.0%
GAGTTGGAATGAGATGTATA+TGG - chr2_3:60723621-60723640 None:intergenic 35.0%
ATCAGAGAGGCTATTAAGAA+AGG - chr2_3:60723657-60723676 None:intergenic 35.0%
! TAGATCTTCTTTTGCCTCTT+AGG + chr2_3:60723685-60723704 Msa0303530:intron 35.0%
GAGGATAATCAAATCCTAAG+AGG - chr2_3:60723702-60723721 None:intergenic 35.0%
TCAGCTTCTTAGAGAGAGAA+TGG - chr2_3:60716098-60716117 None:intergenic 40.0%
GTTGCATGTTGATATTGGGT+GGG - chr2_3:60716189-60716208 None:intergenic 40.0%
GGATGGTTGCATGTTGATAT+TGG - chr2_3:60716194-60716213 None:intergenic 40.0%
ATATGAAAGAGGGAAAGAGG+GGG - chr2_3:60716289-60716308 None:intergenic 40.0%
CGAATATGAAAGAGGGAAAG+AGG - chr2_3:60716292-60716311 None:intergenic 40.0%
!! TATGAGGTTGTTTCTGGTTG+TGG + chr2_3:60716350-60716369 Msa0303530:five_prime_UTR 40.0%
! AGGAAGATTAAATCTAGGGC+TGG + chr2_3:60716408-60716427 Msa0303530:five_prime_UTR 40.0%
TGGAATATTGAGCTGAAGCT+TGG + chr2_3:60716428-60716447 Msa0303530:five_prime_UTR 40.0%
GGAATATTGAGCTGAAGCTT+GGG + chr2_3:60716429-60716448 Msa0303530:five_prime_UTR 40.0%
!! AGAGCTTGTTAATCAAGGGA+AGG + chr2_3:60716477-60716496 Msa0303530:five_prime_UTR 40.0%
GTTCAACAATCATACGAGCT+TGG - chr2_3:60716535-60716554 None:intergenic 40.0%
GAAGCTGTGTATAAGCTGTT+TGG + chr2_3:60716605-60716624 Msa0303530:five_prime_UTR 40.0%
AAACTGATTATGGGAAGCTG+AGG + chr2_3:60716629-60716648 Msa0303530:five_prime_UTR 40.0%
ACGCGTAATTCCCTTCAATT+CGG + chr2_3:60716738-60716757 Msa0303530:intron 40.0%
!! TGCTGTAATTTGTTTACGCG+GGG + chr2_3:60716785-60716804 Msa0303530:intron 40.0%
!! AATTTGTTTACGCGGGGTTT+TGG + chr2_3:60716791-60716810 Msa0303530:intron 40.0%
! ATTTGTTTACGCGGGGTTTT+GGG + chr2_3:60716792-60716811 Msa0303530:intron 40.0%
! TACGAGTTTGTTCTGATCCA+AGG + chr2_3:60716881-60716900 Msa0303530:five_prime_UTR 40.0%
TACTATGAGCCATACCTCAT+AGG - chr2_3:60717303-60717322 None:intergenic 40.0%
TACTATGAGTCGTACCTCAT+AGG - chr2_3:60717371-60717390 None:intergenic 40.0%
AAGAGATAACGTAGCCTATG+AGG + chr2_3:60717423-60717442 Msa0303530:intron 40.0%
ATAACGTAGCCTATGAGGTA+CGG + chr2_3:60717428-60717447 Msa0303530:intron 40.0%
TCATACATAACTGAGCGATC+GGG - chr2_3:60717651-60717670 None:intergenic 40.0%
! TGGGTTGAGTTTAGAACAGA+TGG + chr2_3:60717693-60717712 Msa0303530:intron 40.0%
CAGGTTACTAGACGACAAAA+TGG + chr2_3:60717809-60717828 Msa0303530:five_prime_UTR 40.0%
! CGCCAGTGTTATTATTTCAG+AGG + chr2_3:60717875-60717894 Msa0303530:five_prime_UTR 40.0%
ACACACATGCTAGATATCCT+AGG + chr2_3:60717977-60717996 Msa0303530:five_prime_UTR 40.0%
CACCCTACTAGAAATTACCT+AGG - chr2_3:60717997-60718016 None:intergenic 40.0%
!! GATTTGATTTGCATGTGCAG+AGG - chr2_3:60718175-60718194 None:intergenic 40.0%
TCTGACCAAACAATGAAGAG+AGG + chr2_3:60718211-60718230 Msa0303530:CDS 40.0%
CAGAACCTCTCTTCATTGTT+TGG - chr2_3:60718219-60718238 None:intergenic 40.0%
CAAACAATGAAGAGAGGTTC+TGG + chr2_3:60718217-60718236 Msa0303530:CDS 40.0%
TGAAGGATCTTCTTGCTACT+GGG + chr2_3:60718260-60718279 Msa0303530:CDS 40.0%
GAGATATGTCAAGGGACAAA+AGG + chr2_3:60718303-60718322 Msa0303530:CDS 40.0%
! CCTTGTAAATCCTTTTCTCC+CGG - chr2_3:60718460-60718479 None:intergenic 40.0%
CAAGGTGTGATCAAAGATTC+GGG + chr2_3:60718475-60718494 Msa0303530:CDS 40.0%
! TCGGGAATTTTGTGCTTTTG+TGG + chr2_3:60718493-60718512 Msa0303530:CDS 40.0%
! CGGGAATTTTGTGCTTTTGT+GGG + chr2_3:60718494-60718513 Msa0303530:CDS 40.0%
! TGCTTTTGTGGGAGTTGTAA+GGG + chr2_3:60718505-60718524 Msa0303530:CDS 40.0%
GAATCAGGCAAGTAAATGGA+GGG + chr2_3:60718528-60718547 Msa0303530:CDS 40.0%
TAGTGCTAATAAACGTCCTC+CGG + chr2_3:60718674-60718693 Msa0303530:CDS 40.0%
TTGAGAATGGAAAACCCCTT+CGG + chr2_3:60718709-60718728 Msa0303530:CDS 40.0%
AAGTCTTCCGTTGGATACAT+TGG + chr2_3:60718752-60718771 Msa0303530:CDS 40.0%
ACTAGTATGCAATCCATGCA+TGG + chr2_3:60718971-60718990 Msa0303530:intron 40.0%
ATAACATATTGGGTGCATCG+TGG + chr2_3:60719209-60719228 Msa0303530:intron 40.0%
ACTTTCAGTTGTGTGTACTC+TGG + chr2_3:60719386-60719405 Msa0303530:intron 40.0%
GACACAAGCAGATGTAGAAT+AGG - chr2_3:60719436-60719455 None:intergenic 40.0%
ATTCTACATCTGCTTGTGTC+TGG + chr2_3:60719436-60719455 Msa0303530:intron 40.0%
TTCTACATCTGCTTGTGTCT+GGG + chr2_3:60719437-60719456 Msa0303530:intron 40.0%
! ATTCAGACTGTCTGGAATGT+AGG + chr2_3:60719589-60719608 Msa0303530:intron 40.0%
! TTCAGACTGTCTGGAATGTA+GGG + chr2_3:60719590-60719609 Msa0303530:intron 40.0%
!! AACATACAAAAGAGTGCTCG+AGG + chr2_3:60719729-60719748 Msa0303530:intron 40.0%
!! ACATACAAAAGAGTGCTCGA+GGG + chr2_3:60719730-60719749 Msa0303530:intron 40.0%
GAGTTGAGATGGAATACTCT+TGG + chr2_3:60719769-60719788 Msa0303530:intron 40.0%
GTTGAGATGGAATACTCTTG+GGG + chr2_3:60719771-60719790 Msa0303530:intron 40.0%
TTGAGATGGAATACTCTTGG+GGG + chr2_3:60719772-60719791 Msa0303530:intron 40.0%
TTGTAGCCAAAAAATGGAGG+AGG + chr2_3:60720170-60720189 Msa0303530:CDS 40.0%
! GATGATAAGAACAAGGCATC+AGG + chr2_3:60720192-60720211 Msa0303530:CDS 40.0%
ACACCCAAGAAGAGAAAAGA+AGG + chr2_3:60720318-60720337 Msa0303530:CDS 40.0%
! GGTCCTTCTTTTCTCTTCTT+GGG - chr2_3:60720324-60720343 None:intergenic 40.0%
! AGGTCCTTCTTTTCTCTTCT+TGG - chr2_3:60720325-60720344 None:intergenic 40.0%
!!! GCAGAAGTTGTTTTAGCTTC+AGG - chr2_3:60720345-60720364 None:intergenic 40.0%
GAAGCTAAAACAACTTCTGC+AGG + chr2_3:60720345-60720364 Msa0303530:CDS 40.0%
CTATACGTCCATCATGAGTT+AGG + chr2_3:60720551-60720570 Msa0303530:intron 40.0%
GTGATGTGGAAATAGAAGCA+AGG + chr2_3:60720649-60720668 Msa0303530:intron 40.0%
! ATCGAAAGCTTTATCGCACT+AGG - chr2_3:60720931-60720950 None:intergenic 40.0%
AACAGTCACCTATGTGCTTA+TGG - chr2_3:60720978-60720997 None:intergenic 40.0%
TAAGCACATAGGTGACTGTT+TGG + chr2_3:60720978-60720997 Msa0303530:intron 40.0%
AAGCACATAGGTGACTGTTT+GGG + chr2_3:60720979-60720998 Msa0303530:intron 40.0%
TCAGTGCATGGAACAATTGA+CGG + chr2_3:60721345-60721364 Msa0303530:CDS 40.0%
! TGACGGATATATAGTCACAG+TGG + chr2_3:60721377-60721396 Msa0303530:CDS 40.0%
ATATATAGTCACAGTGGACC+TGG + chr2_3:60721383-60721402 Msa0303530:CDS 40.0%
TATATAGTCACAGTGGACCT+GGG + chr2_3:60721384-60721403 Msa0303530:CDS 40.0%
TGGTCCAATTTCAATGTTCC+GGG + chr2_3:60721588-60721607 Msa0303530:intron 40.0%
! TTCAATGTTCCGGGTTTTTG+GGG + chr2_3:60721597-60721616 Msa0303530:intron 40.0%
! TCTCCTTTTCCCTTTCTTGT+TGG + chr2_3:60721941-60721960 Msa0303530:intron 40.0%
GGTTTCTTAACTCCCAAACA+AGG + chr2_3:60721962-60721981 Msa0303530:intron 40.0%
TTAACTCCCAAACAAGGGAA+GGG + chr2_3:60721968-60721987 Msa0303530:intron 40.0%
!!! CTTTGTTTGCGAGTTTTGAG+GGG - chr2_3:60722059-60722078 None:intergenic 40.0%
!!! GCTTTGTTTGCGAGTTTTGA+GGG - chr2_3:60722060-60722079 None:intergenic 40.0%
! GGCTTGTTTAACGATGATGA+AGG + chr2_3:60722098-60722117 Msa0303530:intron 40.0%
AGTTAACGTGCGTCAAGTTA+TGG - chr2_3:60722273-60722292 None:intergenic 40.0%
TCTGATTGGCAAACTAAGCT+AGG + chr2_3:60722299-60722318 Msa0303530:intron 40.0%
CGATCGGAGATTGCAAAAAA+TGG - chr2_3:60722390-60722409 None:intergenic 40.0%
TTCCTTGGAAAAGCCAAAAG+TGG + chr2_3:60722497-60722516 Msa0303530:intron 40.0%
TCCTTGGAAAAGCCAAAAGT+GGG + chr2_3:60722498-60722517 Msa0303530:intron 40.0%
GTCTGTATCTATAAAGCCTG+TGG - chr2_3:60722679-60722698 None:intergenic 40.0%
TGCAGGTTTATCAGGAGAAA+AGG + chr2_3:60723234-60723253 Msa0303530:intron 40.0%
AAGAACAAGAACCAGCCTTT+AGG + chr2_3:60723558-60723577 Msa0303530:intron 40.0%
AGAACAAGAACCAGCCTTTA+GGG + chr2_3:60723559-60723578 Msa0303530:intron 40.0%
ATCGATGTAGTTGACCCTAA+AGG - chr2_3:60723576-60723595 None:intergenic 40.0%
AGGCCTAGATACTAATGAGT+TGG - chr2_3:60723637-60723656 None:intergenic 40.0%
ATCTGGTAAGACTCGACTTA+GGG - chr2_3:60723763-60723782 None:intergenic 40.0%
TATCTGGTAAGACTCGACTT+AGG - chr2_3:60723764-60723783 None:intergenic 40.0%
TAAGTCGAGTCTTACCAGAT+AGG + chr2_3:60723763-60723782 Msa0303530:intron 40.0%
GATGAAGATTAGGATGGGGA+GGG - chr2_3:60716153-60716172 None:intergenic 45.0%
AGATGAAGATTAGGATGGGG+AGG - chr2_3:60716154-60716173 None:intergenic 45.0%
! GTTGATATTGGGTGGGCTTT+GGG - chr2_3:60716182-60716201 None:intergenic 45.0%
! TGTTGATATTGGGTGGGCTT+TGG - chr2_3:60716183-60716202 None:intergenic 45.0%
GGTTGCATGTTGATATTGGG+TGG - chr2_3:60716190-60716209 None:intergenic 45.0%
CTCAAAGGATTAAGTGGGGA+TGG - chr2_3:60716211-60716230 None:intergenic 45.0%
! CGGTGTTGGAAGAGAGAAAA+GGG - chr2_3:60716264-60716283 None:intergenic 45.0%
!! TCGGTGTTGGAAGAGAGAAA+AGG - chr2_3:60716265-60716284 None:intergenic 45.0%
TATGAAAGAGGGAAAGAGGG+GGG - chr2_3:60716288-60716307 None:intergenic 45.0%
!! GTTTCTGGTTGTGGCTTAAC+TGG + chr2_3:60716359-60716378 Msa0303530:five_prime_UTR 45.0%
GAAGCTTGGGAATTGCTTGA+AGG + chr2_3:60716442-60716461 Msa0303530:five_prime_UTR 45.0%
! TTGATGGATGAGTACACGCA+TGG + chr2_3:60716501-60716520 Msa0303530:five_prime_UTR 45.0%
TACTATGAGCCGTACCTCAT+AGG - chr2_3:60717440-60717459 None:intergenic 45.0%
CATACATAACTGAGCGATCG+GGG - chr2_3:60717650-60717669 None:intergenic 45.0%
TTAGAACAGATGGCGATCCT+AGG + chr2_3:60717703-60717722 Msa0303530:intron 45.0%
GATGAAGAAGCAGAAGTCGT+TGG + chr2_3:60717837-60717856 Msa0303530:five_prime_UTR 45.0%
ACACTGGCGTGAACTTCATA+TGG - chr2_3:60717864-60717883 None:intergenic 45.0%
GTCAGAAGAAGAGAGAGAGA+TGG - chr2_3:60718197-60718216 None:intergenic 45.0%
! TGAAGAGAGGTTCTGGTAAG+AGG + chr2_3:60718224-60718243 Msa0303530:CDS 45.0%
AGAAGATCCTTCAGCTTGAC+AGG - chr2_3:60718253-60718272 None:intergenic 45.0%
CTGAAGGATCTTCTTGCTAC+TGG + chr2_3:60718259-60718278 Msa0303530:CDS 45.0%
TCTTCTTGCTACTGGGATTC+TGG + chr2_3:60718267-60718286 Msa0303530:CDS 45.0%
CCGGGAGAAAAGGATTTACA+AGG + chr2_3:60718457-60718476 Msa0303530:CDS 45.0%
! GTGCTTTTGTGGGAGTTGTA+AGG + chr2_3:60718504-60718523 Msa0303530:CDS 45.0%
! GCTTTTGTGGGAGTTGTAAG+GGG + chr2_3:60718506-60718525 Msa0303530:CDS 45.0%
AGGGGAATCAGGCAAGTAAA+TGG + chr2_3:60718524-60718543 Msa0303530:CDS 45.0%
GGAATCAGGCAAGTAAATGG+AGG + chr2_3:60718527-60718546 Msa0303530:CDS 45.0%
GTGTGGGTTTAGCATCTTGT+AGG + chr2_3:60718572-60718591 Msa0303530:intron 45.0%
TCAAGGTAAGTATACTCCGG+AGG - chr2_3:60718693-60718712 None:intergenic 45.0%
! GAAGGGGTTTTCCATTCTCA+AGG - chr2_3:60718710-60718729 None:intergenic 45.0%
TGAGAATGGAAAACCCCTTC+GGG + chr2_3:60718710-60718729 Msa0303530:CDS 45.0%
ATCCAACGGAAGACTTGAAC+AGG - chr2_3:60718748-60718767 None:intergenic 45.0%
TAAAGTGGTCCAAATGGTCC+TGG + chr2_3:60718776-60718795 Msa0303530:CDS 45.0%
AAAGTGGTCCAAATGGTCCT+GGG + chr2_3:60718777-60718796 Msa0303530:CDS 45.0%
TGAAATCACCCAGGACCATT+TGG - chr2_3:60718788-60718807 None:intergenic 45.0%
TCTGCATAGTGAAATCACCC+AGG - chr2_3:60718797-60718816 None:intergenic 45.0%
GTCTCTTTCAACTCCATGCA+TGG - chr2_3:60718987-60719006 None:intergenic 45.0%
! AGGTTGCTGCTGTTTGAAGT+TGG - chr2_3:60719019-60719038 None:intergenic 45.0%
TTACCACAGTAGTTCAACCC+AGG + chr2_3:60719051-60719070 Msa0303530:intron 45.0%
! ATACCTGGGTTGAACTACTG+TGG - chr2_3:60719057-60719076 None:intergenic 45.0%
CAAATGCTGCTGCGCTATAT+CGG - chr2_3:60719109-60719128 None:intergenic 45.0%
AGATGTAGAATAGGCGCACA+CGG - chr2_3:60719427-60719446 None:intergenic 45.0%
CATTCTGCATTCAGACTGTC+TGG + chr2_3:60719581-60719600 Msa0303530:intron 45.0%
ATTCCGGACTCTATGAACGA+GGG - chr2_3:60719623-60719642 None:intergenic 45.0%
GTTCATAGAGTCCGGAATGT+GGG + chr2_3:60719625-60719644 Msa0303530:intron 45.0%
TTCATAGAGTCCGGAATGTG+GGG + chr2_3:60719626-60719645 Msa0303530:intron 45.0%
!! CATACAAAAGAGTGCTCGAG+GGG + chr2_3:60719731-60719750 Msa0303530:intron 45.0%
!! ATACAAAAGAGTGCTCGAGG+GGG + chr2_3:60719732-60719751 Msa0303530:intron 45.0%
GAATACTCTTGGGGGTTTGA+AGG + chr2_3:60719780-60719799 Msa0303530:intron 45.0%
AAAATATGGGGAAGGCCTTG+TGG + chr2_3:60719821-60719840 Msa0303530:intron 45.0%
GGAGGAGGATGATAAGAACA+AGG + chr2_3:60720185-60720204 Msa0303530:CDS 45.0%
! AAGCTTTATCGCACTAGGTG+AGG - chr2_3:60720926-60720945 None:intergenic 45.0%
TGACTGTTTGGGAGAGCTTA+GGG + chr2_3:60720990-60721009 Msa0303530:intron 45.0%
TTGGGAGAGCTTAGGGATAT+TGG + chr2_3:60720997-60721016 Msa0303530:intron 45.0%
AGTGTCTGTGCTGGACTAAT+TGG - chr2_3:60721318-60721337 None:intergenic 45.0%
ATTAGTCCAGCACAGACACT+CGG + chr2_3:60721318-60721337 Msa0303530:intron 45.0%
CAGTGCATGGAACAATTGAC+GGG + chr2_3:60721346-60721365 Msa0303530:CDS 45.0%
GCATCTAAGGGTTCTTCGAT+TGG + chr2_3:60721450-60721469 Msa0303530:CDS 45.0%
TCTAAGGGTTCTTCGATTGG+AGG + chr2_3:60721453-60721472 Msa0303530:CDS 45.0%
CGACCGAAATCAAATAGGAG+TGG + chr2_3:60721530-60721549 Msa0303530:intron 45.0%
!! TCAATGTTCCGGGTTTTTGG+GGG + chr2_3:60721598-60721617 Msa0303530:intron 45.0%
TGTTTAACCCCCCAAAAACC+CGG - chr2_3:60721609-60721628 None:intergenic 45.0%
CTTAACTCCCAAACAAGGGA+AGG + chr2_3:60721967-60721986 Msa0303530:intron 45.0%
! GGAAAACCCTTCCCTTGTTT+GGG - chr2_3:60721977-60721996 None:intergenic 45.0%
AGGAAAGGAAAGGCTAAGGT+GGG - chr2_3:60722035-60722054 None:intergenic 45.0%
AAGGAAAGGAAAGGCTAAGG+TGG - chr2_3:60722036-60722055 None:intergenic 45.0%
TTTGAGGGGAAGGAAAGGAA+AGG - chr2_3:60722045-60722064 None:intergenic 45.0%
!!! GGCTTTGTTTGCGAGTTTTG+AGG - chr2_3:60722061-60722080 None:intergenic 45.0%
GTTTAACGATGATGAAGGGG+AGG + chr2_3:60722103-60722122 Msa0303530:intron 45.0%
ATGAAGGGGAGGTAAAGGAA+AGG + chr2_3:60722114-60722133 Msa0303530:intron 45.0%
GTTTCGCAAATGACAGGCTA+AGG - chr2_3:60722467-60722486 None:intergenic 45.0%
AAGGCAGTTTCGCAAATGAC+AGG - chr2_3:60722473-60722492 None:intergenic 45.0%
GAAACTGCCTTGATGTTCCT+TGG + chr2_3:60722482-60722501 Msa0303530:intron 45.0%
! GGCTTTTCCAAGGAACATCA+AGG - chr2_3:60722492-60722511 None:intergenic 45.0%
!!! TCCCACTTTTGGCTTTTCCA+AGG - chr2_3:60722502-60722521 None:intergenic 45.0%
ATGTAGTTGACCCTAAAGGC+TGG - chr2_3:60723572-60723591 None:intergenic 45.0%
GGGAAAACCTGTAGATTCTG+TGG - chr2_3:60723743-60723762 None:intergenic 45.0%
GAGTTGAGGTAACACCTATC+TGG - chr2_3:60723780-60723799 None:intergenic 45.0%
!!! ATTTCATAATTATTATTTTT+AGG - chr2_3:60721724-60721743 None:intergenic 5.0%
!! AATAATAATTATGAAATAAA+AGG + chr2_3:60721727-60721746 Msa0303530:intron 5.0%
TCTCTCTCCTCCATCTCTCT+CGG + chr2_3:60716121-60716140 Msa0303530:five_prime_UTR 50.0%
GGAGCAAAGGGATAGCAGTA+AGG + chr2_3:60716388-60716407 Msa0303530:five_prime_UTR 50.0%
TGAGTACACGCATGGTTCAG+AGG + chr2_3:60716509-60716528 Msa0303530:five_prime_UTR 50.0%
TGACGCAGGGGTTGAGATAA+TGG + chr2_3:60716923-60716942 Msa0303530:five_prime_UTR 50.0%
CTCTTCGTTGTAGCAAACGG+AGG - chr2_3:60717271-60717290 None:intergenic 50.0%
TAGGCAATCTCAGGGAACCT+AGG - chr2_3:60717723-60717742 None:intergenic 50.0%
CTAGGCTGTAGGCAATCTCA+GGG - chr2_3:60717731-60717750 None:intergenic 50.0%
GATTGCCTACAGCCTAGGAT+AGG + chr2_3:60717734-60717753 Msa0303530:intron 50.0%
TTCCACCTATCCTAGGCTGT+AGG - chr2_3:60717742-60717761 None:intergenic 50.0%
TGTCGAGTTCCACCTATCCT+AGG - chr2_3:60717749-60717768 None:intergenic 50.0%
GAGGTTTCCTGTCAAGCTGA+AGG + chr2_3:60718243-60718262 Msa0303530:CDS 50.0%
TGATGTGTAGGCGCGTAAAC+CGG + chr2_3:60718438-60718457 Msa0303530:intron 50.0%
TGGGAGTTGTAAGGGGAATC+AGG + chr2_3:60718513-60718532 Msa0303530:CDS 50.0%
CAGGCAAGTAAATGGAGGGA+TGG + chr2_3:60718532-60718551 Msa0303530:CDS 50.0%
GCATTCATGACATCCCGAAG+GGG - chr2_3:60718726-60718745 None:intergenic 50.0%
GGCATTCATGACATCCCGAA+GGG - chr2_3:60718727-60718746 None:intergenic 50.0%
AGGCATTCATGACATCCCGA+AGG - chr2_3:60718728-60718747 None:intergenic 50.0%
TGCCTGTTCAAGTCTTCCGT+TGG + chr2_3:60718743-60718762 Msa0303530:CDS 50.0%
AGCGCACTGCAGCATAAAAG+TGG - chr2_3:60719138-60719157 None:intergenic 50.0%
CTGCTTGTGTCTGGGAACTT+TGG + chr2_3:60719445-60719464 Msa0303530:intron 50.0%
ATGACTTCCTCCTCGAGCAA+GGG - chr2_3:60719491-60719510 None:intergenic 50.0%
AATGACTTCCTCCTCGAGCA+AGG - chr2_3:60719492-60719511 None:intergenic 50.0%
GACTCTATGAACGAGGGATC+TGG - chr2_3:60719617-60719636 None:intergenic 50.0%
GATCCCTCGTTCATAGAGTC+CGG + chr2_3:60719617-60719636 Msa0303530:intron 50.0%
CATTCCGGACTCTATGAACG+AGG - chr2_3:60719624-60719643 None:intergenic 50.0%
CGTTCATAGAGTCCGGAATG+TGG + chr2_3:60719624-60719643 Msa0303530:intron 50.0%
CCTTGTGGAACGGCTGTATA+CGG + chr2_3:60719836-60719855 Msa0303530:intron 50.0%
CTTGTGGAACGGCTGTATAC+GGG + chr2_3:60719837-60719856 Msa0303530:intron 50.0%
! AGCGCGTCCTCTTCTTTTCT+TGG - chr2_3:60720379-60720398 None:intergenic 50.0%
AAAAGAAGAGGACGCGCTCT+TGG + chr2_3:60720381-60720400 Msa0303530:CDS 50.0%
GTGACTGTTTGGGAGAGCTT+AGG + chr2_3:60720989-60721008 Msa0303530:intron 50.0%
ACACTCGGTTCTTCAGTGCA+TGG + chr2_3:60721333-60721352 Msa0303530:CDS 50.0%
CTTTCAGCTGTTCAGAACCC+AGG - chr2_3:60721404-60721423 None:intergenic 50.0%
!! CTGGGTTCTGAACAGCTGAA+AGG + chr2_3:60721402-60721421 Msa0303530:CDS 50.0%
!! CAATGTTCCGGGTTTTTGGG+GGG + chr2_3:60721599-60721618 Msa0303530:intron 50.0%
GGGAAAACCCTTCCCTTGTT+TGG - chr2_3:60721978-60721997 None:intergenic 50.0%
GAAAGGAAAGGCTAAGGTGG+GGG - chr2_3:60722033-60722052 None:intergenic 50.0%
GGAAAGGAAAGGCTAAGGTG+GGG - chr2_3:60722034-60722053 None:intergenic 50.0%
GGGAAGGAAAGGAAAGGCTA+AGG - chr2_3:60722039-60722058 None:intergenic 50.0%
!!! CGAGTTTTGAGGGGAAGGAA+AGG - chr2_3:60722050-60722069 None:intergenic 50.0%
!!! GTTTGCGAGTTTTGAGGGGA+AGG - chr2_3:60722055-60722074 None:intergenic 50.0%
CGATGATGAAGGGGAGGTAA+AGG + chr2_3:60722109-60722128 Msa0303530:intron 50.0%
! GCATTTGAGATTGCTCCCAC+AGG + chr2_3:60722660-60722679 Msa0303530:intron 50.0%
TTCTCATGGGGCTGAACCAT+TGG - chr2_3:60723306-60723325 None:intergenic 50.0%
GAAGATTAGGATGGGGAGGG+AGG - chr2_3:60716150-60716169 None:intergenic 55.0%
AAAGAGGGAAAGAGGGGGGT+CGG - chr2_3:60716284-60716303 None:intergenic 55.0%
!!! TTTACGCGGGGTTTTGGGAC+AGG + chr2_3:60716797-60716816 Msa0303530:intron 55.0%
!!! TTACGCGGGGTTTTGGGACA+GGG + chr2_3:60716798-60716817 Msa0303530:intron 55.0%
CTGAGCGATCGGGGATAACT+AGG - chr2_3:60717641-60717660 None:intergenic 55.0%
CCTAGGCTGTAGGCAATCTC+AGG - chr2_3:60717732-60717751 None:intergenic 55.0%
CCTGAGATTGCCTACAGCCT+AGG + chr2_3:60717729-60717748 Msa0303530:intron 55.0%
TGCCTACAGCCTAGGATAGG+TGG + chr2_3:60717737-60717756 Msa0303530:intron 55.0%
GATGTGTAGGCGCGTAAACC+GGG + chr2_3:60718439-60718458 Msa0303530:intron 55.0%
AGCAAGGGCTTGAGCAGCAA+CGG - chr2_3:60719476-60719495 None:intergenic 55.0%
CATGTCCAGACCCCACATTC+CGG - chr2_3:60719639-60719658 None:intergenic 55.0%
! ATGGGGAAGGCCTTGTGGAA+CGG + chr2_3:60719826-60719845 Msa0303530:intron 55.0%
CCGTATACAGCCGTTCCACA+AGG - chr2_3:60719839-60719858 None:intergenic 55.0%
AGAGGACGCGCTCTTGGTTT+CGG + chr2_3:60720387-60720406 Msa0303530:CDS 55.0%
GAAGAACCGAGTGTCTGTGC+TGG - chr2_3:60721327-60721346 None:intergenic 55.0%
GAAAGGCTAAGGTGGGGGAA+GGG - chr2_3:60722028-60722047 None:intergenic 55.0%
ACTATTGCGCTGCTGCGTAG+CGG + chr2_3:60722349-60722368 Msa0303530:intron 55.0%
TAGGCAACAGGGTTGCCGAT+CGG - chr2_3:60722406-60722425 None:intergenic 55.0%
GAGGTTGCCGAGAGAGATGG+AGG - chr2_3:60716131-60716150 None:intergenic 60.0%
AGGGAGGTTGCCGAGAGAGA+TGG - chr2_3:60716134-60716153 None:intergenic 60.0%
GGCGCGTAAACCGGGAGAAA+AGG + chr2_3:60718447-60718466 Msa0303530:intron 60.0%
AGAGTCCGGAATGTGGGGTC+TGG + chr2_3:60719631-60719650 Msa0303530:intron 60.0%
GGGTCTGGACATGCCAGAAC+AGG + chr2_3:60719646-60719665 Msa0303530:intron 60.0%
GCTAAGGTGGGGGAAGGGAA+GGG - chr2_3:60722023-60722042 None:intergenic 60.0%
GGAAAGGCTAAGGTGGGGGA+AGG - chr2_3:60722029-60722048 None:intergenic 60.0%
GGAAAGAGGGGGGTCGGTGT+TGG - chr2_3:60716278-60716297 None:intergenic 65.0%
GCTGCTCAAGCCCTTGCTCG+AGG + chr2_3:60719478-60719497 Msa0303530:intron 65.0%
GCTCAAGCCCTTGCTCGAGG+AGG + chr2_3:60719481-60719500 Msa0303530:intron 65.0%
AGGGAAGGGAGGGGAGAGGA+GGG - chr2_3:60722009-60722028 None:intergenic 65.0%
AAGGGAAGGGAGGGGAGAGG+AGG - chr2_3:60722010-60722029 None:intergenic 65.0%
AGGTGGGGGAAGGGAAGGGA+GGG - chr2_3:60722019-60722038 None:intergenic 65.0%
AAGGTGGGGGAAGGGAAGGG+AGG - chr2_3:60722020-60722039 None:intergenic 65.0%
GGCTAAGGTGGGGGAAGGGA+AGG - chr2_3:60722024-60722043 None:intergenic 65.0%
GGGAGAGGAGGGGGGAAGGA+GGG - chr2_3:60721998-60722017 None:intergenic 70.0%
GAAGGGAGGGGAGAGGAGGG+GGG - chr2_3:60722006-60722025 None:intergenic 70.0%
GGAAGGGAGGGGAGAGGAGG+GGG - chr2_3:60722007-60722026 None:intergenic 70.0%
GGGAAGGGAGGGGAGAGGAG+GGG - chr2_3:60722008-60722027 None:intergenic 70.0%
GGGAAGGGAAGGGAGGGGAG+AGG - chr2_3:60722013-60722032 None:intergenic 70.0%
GGTGGGGGAAGGGAAGGGAG+GGG - chr2_3:60722018-60722037 None:intergenic 70.0%
GGGGAGAGGAGGGGGGAAGG+AGG - chr2_3:60721999-60722018 None:intergenic 75.0%
GGAGGGGAGAGGAGGGGGGA+AGG - chr2_3:60722002-60722021 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 60716090 60723812 60716090 ID=Msa0303530;Name=Msa0303530
chr2_3 mRNA 60716090 60723812 60716090 ID=Msa0303530-mRNA-1;Parent=Msa0303530;Name=Msa0303530-mRNA-1;_AED=0.11;_eAED=0.11;_QI=1117|0.66|0.6|1|0.66|0.5|10|287|342
chr2_3 exon 60716090 60716650 60716090 ID=Msa0303530-mRNA-1:exon:19843;Parent=Msa0303530-mRNA-1
chr2_3 exon 60716819 60716997 60716819 ID=Msa0303530-mRNA-1:exon:19844;Parent=Msa0303530-mRNA-1
chr2_3 exon 60717804 60718324 60717804 ID=Msa0303530-mRNA-1:exon:19845;Parent=Msa0303530-mRNA-1
chr2_3 exon 60718448 60718573 60718448 ID=Msa0303530-mRNA-1:exon:19846;Parent=Msa0303530-mRNA-1
chr2_3 exon 60718639 60718843 60718639 ID=Msa0303530-mRNA-1:exon:19847;Parent=Msa0303530-mRNA-1
chr2_3 exon 60718937 60718974 60718937 ID=Msa0303530-mRNA-1:exon:19848;Parent=Msa0303530-mRNA-1
chr2_3 exon 60720144 60720483 60720144 ID=Msa0303530-mRNA-1:exon:19849;Parent=Msa0303530-mRNA-1
chr2_3 exon 60721328 60721474 60721328 ID=Msa0303530-mRNA-1:exon:19850;Parent=Msa0303530-mRNA-1
chr2_3 exon 60723239 60723526 60723239 ID=Msa0303530-mRNA-1:exon:19851;Parent=Msa0303530-mRNA-1
chr2_3 exon 60723785 60723812 60723785 ID=Msa0303530-mRNA-1:exon:19852;Parent=Msa0303530-mRNA-1
chr2_3 five_prime_UTR 60716090 60716650 60716090 ID=Msa0303530-mRNA-1:five_prime_utr;Parent=Msa0303530-mRNA-1
chr2_3 five_prime_UTR 60716819 60716997 60716819 ID=Msa0303530-mRNA-1:five_prime_utr;Parent=Msa0303530-mRNA-1
chr2_3 five_prime_UTR 60717804 60718180 60717804 ID=Msa0303530-mRNA-1:five_prime_utr;Parent=Msa0303530-mRNA-1
chr2_3 CDS 60718181 60718324 60718181 ID=Msa0303530-mRNA-1:cds;Parent=Msa0303530-mRNA-1
chr2_3 CDS 60718448 60718573 60718448 ID=Msa0303530-mRNA-1:cds;Parent=Msa0303530-mRNA-1
chr2_3 CDS 60718639 60718843 60718639 ID=Msa0303530-mRNA-1:cds;Parent=Msa0303530-mRNA-1
chr2_3 CDS 60718937 60718974 60718937 ID=Msa0303530-mRNA-1:cds;Parent=Msa0303530-mRNA-1
chr2_3 CDS 60720144 60720483 60720144 ID=Msa0303530-mRNA-1:cds;Parent=Msa0303530-mRNA-1
chr2_3 CDS 60721328 60721474 60721328 ID=Msa0303530-mRNA-1:cds;Parent=Msa0303530-mRNA-1
chr2_3 CDS 60723239 60723267 60723239 ID=Msa0303530-mRNA-1:cds;Parent=Msa0303530-mRNA-1
chr2_3 three_prime_UTR 60723268 60723526 60723268 ID=Msa0303530-mRNA-1:three_prime_utr;Parent=Msa0303530-mRNA-1
chr2_3 three_prime_UTR 60723785 60723812 60723785 ID=Msa0303530-mRNA-1:three_prime_utr;Parent=Msa0303530-mRNA-1
Gene Sequence

>Msa0303530

ATGCAAATCAAATCCATCTCTCTCTCTTCTTCTGACCAAACAATGAAGAGAGGTTCTGGTAAGAGGTTTCCTGTCAAGCTGAAGGATCTTCTTGCTACTGGGATTCTGGAGAGATTGAAAGTGAGATATGTCAAGGGACAAAAGGCGCGTAAACCGGGAGAAAAGGATTTACAAGGTGTGATCAAAGATTCGGGAATTTTGTGCTTTTGTGGGAGTTGTAAGGGGAATCAGGCAAGTAAATGGAGGGATGGTTATTGTTTTTTTGCTTGTGTTGTCTCGCCGAATGTTTTTGAGTTGCATGCTGGTAGTGCTAATAAACGTCCTCCGGAGTATACTTACCTTGAGAATGGAAAACCCCTTCGGGATGTCATGAATGCCTGTTCAAGTCTTCCGTTGGATACATTGGATAAAGTGGTCCAAATGGTCCTGGGTGATTTCACTATGCAGAATTCTAATATCTGTTTCAATTGCAGAGGGTCAATTTCTGAATCTAACAAGGGTAAGTCAAAACTACATATCAAAATTTATTCTTCTTGTTCTTGTAGCCAAAAAATGGAGGAGGATGATAAGAACAAGGCATCAGGAAAGATGATCAGTTCTACTACTGATCATCATCAGAAAGAGGGTGATGATGTAGCCATGAATGATTCTACATTTTCATTGCAATTGGCTTCTTCTCTCAACAGAACACCCAAGAAGAGAAAAGAAGGACCTGAAGCTAAAACAACTTCTGCAGGAACTTCTTCCAAGAAAAGAAGAGGACGCGCTCTTGGTTTCGGATCAAAAAATAAGAGAGAAGAAGGACCTTCTGAAAAAACTACTTCTGCAGAAACTTCTTCCAAGAATATTAGAGCACAGACACTCGGTTCTTCAGTGCATGGAACAATTGACGGGAAATTTGATGACGGATATATAGTCACAGTGGACCTGGGTTCTGAACAGCTGAAAGGTGTCTTGTATCATGTTTCAAGTAATGCATCTAAGGGTTCTTCGATTGGAGGTTTATCAGGAGAAAAGGTTGAGAGATAA
Protein sequence

>Msa0303530

MQIKSISLSSSDQTMKRGSGKRFPVKLKDLLATGILERLKVRYVKGQKARKPGEKDLQGVIKDSGILCFCGSCKGNQASKWRDGYCFFACVVSPNVFELHAGSANKRPPEYTYLENGKPLRDVMNACSSLPLDTLDKVVQMVLGDFTMQNSNICFNCRGSISESNKGKSKLHIKIYSSCSCSQKMEEDDKNKASGKMISSTTDHHQKEGDDVAMNDSTFSLQLASSLNRTPKKRKEGPEAKTTSAGTSSKKRRGRALGFGSKNKREEGPSEKTTSAETSSKNIRAQTLGSSVHGTIDGKFDDGYIVTVDLGSEQLKGVLYHVSSNASKGSSIGGLSGEKVER*