AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0297120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0297120 MtrunA17_Chr2g0320431 68.129 342 45 7 1 342 1 278 6.05e-142 402
Msa0297120 MtrunA17_Chr2g0320451 86.076 158 8 2 15 171 217 361 6.70e-83 271
Msa0297120 MtrunA17_Chr2g0314231 77.241 145 31 2 15 158 1 144 8.85e-74 225
Msa0297120 MtrunA17_Chr2g0314241 62.329 146 12 2 15 159 51 154 6.86e-52 169
Msa0297120 MtrunA17_Chr2g0320401 92.424 66 5 0 12 77 42 107 6.42e-36 126
Msa0297120 MtrunA17_Chr3g0079841 95.833 48 2 0 285 332 174 221 7.64e-22 93.6
Msa0297120 MtrunA17_Chr7g0265211 34.722 144 77 2 21 164 246 372 2.28e-18 86.7
Msa0297120 MtrunA17_Chr7g0222931 34.848 132 68 2 13 144 394 507 2.88e-16 79.7
Msa0297120 MtrunA17_Chr1g0182221 33.333 129 68 2 16 144 394 504 1.05e-15 78.2
Msa0297120 MtrunA17_Chr1g0182481 33.607 122 63 2 23 144 254 357 2.56e-14 74.3
Msa0297120 MtrunA17_Chr1g0179841 28.977 176 106 4 25 200 97 253 2.22e-13 71.2
Msa0297120 MtrunA17_Chr4g0030901 28.169 142 82 3 4 144 298 420 2.27e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0297120 AT2G27980.1 39.834 241 104 7 16 247 366 574 5.68e-38 144
Msa0297120 AT5G13660.1 34.043 141 74 3 13 152 388 510 4.33e-16 79.7
Msa0297120 AT5G13660.2 33.333 141 76 3 13 152 388 511 1.06e-15 78.6
Msa0297120 AT3G53680.1 33.333 132 70 2 13 144 172 285 1.18e-14 75.5
Msa0297120 AT3G53680.2 33.333 132 70 2 13 144 172 285 1.26e-14 75.5
Msa0297120 AT5G59830.3 31.783 129 69 2 16 144 283 392 1.86e-14 74.3
Msa0297120 AT5G59830.1 31.783 129 69 2 16 144 283 392 1.86e-14 74.3
Msa0297120 AT5G59830.2 31.783 129 69 2 16 144 283 392 1.86e-14 74.3
Msa0297120 AT2G36720.1 31.944 144 82 2 24 167 261 388 2.52e-14 74.7
Msa0297120 AT2G36720.2 31.944 144 82 2 24 167 261 388 2.52e-14 74.7
Msa0297120 AT2G37520.1 30.328 122 67 2 23 144 172 275 2.54e-11 65.5

Find 177 sgRNAs with CRISPR-Local

Find 513 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATGTATGAGGTTGTTTC+TGG 0.192728 2_3:-50776060 Msa0297120:five_prime_UTR
GACATATCTTGTGTAAATTA+TGG 0.198808 2_3:-50769050 Msa0297120:three_prime_UTR
TTTATTTATTTCAGATATTC+AGG 0.221030 2_3:-50774614 Msa0297120:intron
AACTTTAGACTGATAAAATA+AGG 0.225784 2_3:+50768958 None:intergenic
TCTTCTTGCTACTGGGATTC+TGG 0.235279 2_3:-50774137 Msa0297120:CDS
GTTTCTGGTTGTGGCTTAAC+TGG 0.237073 2_3:-50776045 Msa0297120:five_prime_UTR
TGTTGATATTGGGTGGGCTT+TGG 0.261881 2_3:+50776224 None:intergenic
GTTGATATTGGGTGGGCTTT+GGG 0.267260 2_3:+50776225 None:intergenic
TGTTTCAAGTAATGCATCTA+AGG 0.270395 2_3:-50770967 Msa0297120:CDS
GGATGGTTGCATGTTGATAT+TGG 0.276730 2_3:+50776213 None:intergenic
TTAAAACGTTTGACGAATTT+CGG 0.280561 2_3:-50775578 Msa0297120:five_prime_UTR
GCTGTTTGGAAAACTGATTA+TGG 0.283222 2_3:-50775785 Msa0297120:five_prime_UTR
TAATTTAATGCAGGTTTATC+AGG 0.284330 2_3:-50769178 Msa0297120:intron
TTGTGGCTTAACTGGTAATT+AGG 0.292612 2_3:-50776037 Msa0297120:five_prime_UTR
TGTAATACCTCTAATATTCT+TGG 0.296263 2_3:+50771935 None:intergenic
GATGGTTGCATGTTGATATT+GGG 0.306220 2_3:+50776214 None:intergenic
AGAGGACGCGCTCTTGGTTT+CGG 0.309605 2_3:-50772017 Msa0297120:CDS
TAGTTATGACTGTACCATTT+GGG 0.310869 2_3:+50774351 None:intergenic
TGACGCAGGGGTTGAGATAA+TGG 0.326130 2_3:-50775481 Msa0297120:five_prime_UTR
ACTTCTTCCAAGAATATTAG+AGG 0.334129 2_3:-50771942 Msa0297120:intron
GGAGAGATTGAGTTTGTATA+AGG 0.334929 2_3:+50776164 None:intergenic
CAGAACCTCTCTTCATTGTT+TGG 0.338881 2_3:+50774188 None:intergenic
TGATGTGTAGGCGCGTAAAC+CGG 0.346747 2_3:-50773966 Msa0297120:intron
TGGGAGTTGTAAGGGGAATC+AGG 0.356202 2_3:-50773891 Msa0297120:CDS
TTGTAGTTCTTCTTAAATCA+TGG 0.366299 2_3:-50768985 Msa0297120:three_prime_UTR
CTGAAGGATCTTCTTGCTAC+TGG 0.368934 2_3:-50774145 Msa0297120:CDS
ATTGGGCATGTTAAAATTGT+TGG 0.372170 2_3:-50775847 Msa0297120:five_prime_UTR
TTAATCAAGGGAAGGTTTGA+TGG 0.375410 2_3:-50775919 Msa0297120:five_prime_UTR
TGAGAGATAAAGAAAGATAT+AGG 0.376425 2_3:-50769146 Msa0297120:exon
TTCTTCAATAACTAAATCCT+TGG 0.376453 2_3:+50775506 None:intergenic
ACAAGGTGTGATCAAAGATT+CGG 0.383443 2_3:-50773930 Msa0297120:CDS
TAAAATCTCAAAGGATTAAG+TGG 0.386753 2_3:+50776190 None:intergenic
TTAGTTATGACTGTACCATT+TGG 0.389361 2_3:+50774350 None:intergenic
AGGGGAATCAGGCAAGTAAA+TGG 0.390137 2_3:-50773880 Msa0297120:CDS
GAAGCTGTGTATAAGCTGTT+TGG 0.393112 2_3:-50775799 Msa0297120:five_prime_UTR
ACTTTAGACTGATAAAATAA+GGG 0.393899 2_3:+50768959 None:intergenic
TTCTCATGGGGCTGAACCAT+TGG 0.394057 2_3:+50769101 None:intergenic
TGAAATCACCCAGGACCATT+TGG 0.395853 2_3:+50773619 None:intergenic
CAAACAATGAAGAGAGGTTC+TGG 0.397824 2_3:-50774187 Msa0297120:CDS
CGGTGTTGGAAGAGAGAAAA+GGG 0.399328 2_3:+50776143 None:intergenic
CATGTTAAAATTGTTGGACT+AGG 0.401623 2_3:-50775841 Msa0297120:five_prime_UTR
TATGAGGTTGTTTCTGGTTG+TGG 0.401944 2_3:-50776054 Msa0297120:five_prime_UTR
TGAAAATGTAGAATCATTCA+TGG 0.404321 2_3:+50772136 None:intergenic
CAGTAAGGAAGATTAAATCT+AGG 0.407334 2_3:-50776001 Msa0297120:five_prime_UTR
TCATCTACAGGTTTCAATAC+TGG 0.408228 2_3:+50775554 None:intergenic
CTGTTTGGAAAACTGATTAT+GGG 0.418430 2_3:-50775784 Msa0297120:five_prime_UTR
CAAGGTGTGATCAAAGATTC+GGG 0.420500 2_3:-50773929 Msa0297120:CDS
GATAAGCTCATTATAATTCA+AGG 0.425747 2_3:-50768903 Msa0297120:three_prime_UTR
TGGAATATTGAGCTGAAGCT+TGG 0.427209 2_3:-50775976 Msa0297120:five_prime_UTR
TGCAGGTTTATCAGGAGAAA+AGG 0.428315 2_3:-50769170 Msa0297120:intron
TATCCTAGGTAATTTCTAGT+AGG 0.431469 2_3:-50774413 Msa0297120:five_prime_UTR
CAAAACTTCGAATATGAAAG+AGG 0.432242 2_3:+50776107 None:intergenic
TGAAGAGAGGTTCTGGTAAG+AGG 0.433762 2_3:-50774180 Msa0297120:CDS
TGGGTGAAAAGATGAAGATT+AGG 0.435134 2_3:+50776244 None:intergenic
TGAGAATGGAAAACCCCTTC+GGG 0.436511 2_3:-50773694 Msa0297120:CDS
AGAAGATCCTTCAGCTTGAC+AGG 0.436708 2_3:+50774154 None:intergenic
GAACAAGAGCTTGTTAATCA+AGG 0.438458 2_3:-50775932 Msa0297120:five_prime_UTR
CGTATGATTGTTGAACTGAT+TGG 0.444379 2_3:-50775865 Msa0297120:five_prime_UTR
AGGGAGGTTGCCGAGAGAGA+TGG 0.448953 2_3:+50776273 None:intergenic
TAGTTTCCGCAAAATGTTTG+AGG 0.454780 2_3:-50775428 Msa0297120:intron
AAAAGAAGAGGACGCGCTCT+TGG 0.456495 2_3:-50772023 Msa0297120:CDS
GGCGCGTAAACCGGGAGAAA+AGG 0.458730 2_3:-50773957 Msa0297120:CDS
GCATCTAAGGGTTCTTCGAT+TGG 0.459590 2_3:-50770954 Msa0297120:CDS
GATGTGTAGGCGCGTAAACC+GGG 0.460301 2_3:-50773965 Msa0297120:intron
AACTGGTAATTAGGAGCAAA+GGG 0.461518 2_3:-50776028 Msa0297120:five_prime_UTR
CGTACTTTAAAATCATCTAC+AGG 0.464192 2_3:+50775542 None:intergenic
GGAATATTGAGCTGAAGCTT+GGG 0.465466 2_3:-50775975 Msa0297120:five_prime_UTR
ATCCAACGGAAGACTTGAAC+AGG 0.468127 2_3:+50773659 None:intergenic
TCAGCTTCTTAGAGAGAGAA+TGG 0.468966 2_3:+50776309 None:intergenic
CAGGTTACTAGACGACAAAA+TGG 0.476703 2_3:-50774595 Msa0297120:five_prime_UTR
ACACTGGCGTGAACTTCATA+TGG 0.479504 2_3:+50774543 None:intergenic
GAAGATTAGGATGGGGAGGG+AGG 0.479742 2_3:+50776257 None:intergenic
ATTGGATAAAGTGGTCCAAA+TGG 0.481017 2_3:-50773634 Msa0297120:CDS
GAAGCTTGGGAATTGCTTGA+AGG 0.482052 2_3:-50775962 Msa0297120:five_prime_UTR
GAGATATGTCAAGGGACAAA+AGG 0.483260 2_3:-50774101 Msa0297120:intron
TACGAGTTTGTTCTGATCCA+AGG 0.483469 2_3:-50775523 Msa0297120:five_prime_UTR
GATGATAAGAACAAGGCATC+AGG 0.484160 2_3:-50772212 Msa0297120:CDS
TCGGTGTTGGAAGAGAGAAA+AGG 0.486138 2_3:+50776142 None:intergenic
AGATGAAGATTAGGATGGGG+AGG 0.487153 2_3:+50776253 None:intergenic
AGTAAGGAAGATTAAATCTA+GGG 0.488065 2_3:-50776000 Msa0297120:five_prime_UTR
TTGAGAATGGAAAACCCCTT+CGG 0.491236 2_3:-50773695 Msa0297120:CDS
ACACCCAAGAAGAGAAAAGA+AGG 0.493070 2_3:-50772086 Msa0297120:CDS
ATGTGTGTTAAACTTGGTAT+TGG 0.493700 2_3:+50774442 None:intergenic
GTTAACAGTTATTAATGAGT+TGG 0.494746 2_3:-50774283 Msa0297120:five_prime_UTR
TCAGTGCATGGAACAATTGA+CGG 0.496206 2_3:-50771059 Msa0297120:CDS
CGCCAGTGTTATTATTTCAG+AGG 0.496650 2_3:-50774529 Msa0297120:five_prime_UTR
ATGTTAAAATTGTTGGACTA+GGG 0.497849 2_3:-50775840 Msa0297120:five_prime_UTR
AATAATGCTTAAAATGTATG+AGG 0.499483 2_3:-50776070 Msa0297120:five_prime_UTR
GTCAGAAGAAGAGAGAGAGA+TGG 0.500808 2_3:+50774210 None:intergenic
GTATGATTGTTGAACTGATT+GGG 0.501319 2_3:-50775864 Msa0297120:five_prime_UTR
AAGTCTTCCGTTGGATACAT+TGG 0.504489 2_3:-50773652 Msa0297120:CDS
ATATATAGTCACAGTGGACC+TGG 0.505154 2_3:-50771021 Msa0297120:CDS
TCTCTCTCCTCCATCTCTCT+CGG 0.505307 2_3:-50776283 Msa0297120:five_prime_UTR
GAGTATACTTACCTTGAGAA+TGG 0.507044 2_3:-50773708 Msa0297120:CDS
TGAAAAGATGAAGATTAGGA+TGG 0.507359 2_3:+50776248 None:intergenic
TCTAAGGGTTCTTCGATTGG+AGG 0.509350 2_3:-50770951 Msa0297120:intron
GGTTGCATGTTGATATTGGG+TGG 0.510332 2_3:+50776217 None:intergenic
TAAAGTGGTCCAAATGGTCC+TGG 0.511290 2_3:-50773628 Msa0297120:CDS
GTTGGATACATTGGATAAAG+TGG 0.521620 2_3:-50773643 Msa0297120:CDS
AGGAAGATTAAATCTAGGGC+TGG 0.522502 2_3:-50775996 Msa0297120:five_prime_UTR
TCTAGCATGTGTGTTAAACT+TGG 0.522900 2_3:+50774436 None:intergenic
GTCTAAAGTTAATCAATGAA+TGG 0.523205 2_3:-50768945 Msa0297120:three_prime_UTR
TACTGATCATCATCAGAAAG+AGG 0.525133 2_3:-50772171 Msa0297120:CDS
AACAAGAGCTTGTTAATCAA+GGG 0.526044 2_3:-50775931 Msa0297120:five_prime_UTR
CTCAAAGGATTAAGTGGGGA+TGG 0.527193 2_3:+50776196 None:intergenic
CGAATATGAAAGAGGGAAAG+AGG 0.528854 2_3:+50776115 None:intergenic
GGAGCAAAGGGATAGCAGTA+AGG 0.531154 2_3:-50776016 Msa0297120:five_prime_UTR
TGCCTGTTCAAGTCTTCCGT+TGG 0.532331 2_3:-50773661 Msa0297120:CDS
GTTGCATGTTGATATTGGGT+GGG 0.534474 2_3:+50776218 None:intergenic
TAGTGCTAATAAACGTCCTC+CGG 0.534619 2_3:-50773730 Msa0297120:CDS
GAAAAGATGAAGATTAGGAT+GGG 0.536461 2_3:+50776249 None:intergenic
GAAGCTAAAACAACTTCTGC+AGG 0.536662 2_3:-50772059 Msa0297120:CDS
AAAATCTCAAAGGATTAAGT+GGG 0.540092 2_3:+50776191 None:intergenic
TGAAGGATCTTCTTGCTACT+GGG 0.540212 2_3:-50774144 Msa0297120:CDS
TAACTGGTAATTAGGAGCAA+AGG 0.540679 2_3:-50776029 Msa0297120:five_prime_UTR
ATCCTAGGTAATTTCTAGTA+GGG 0.540858 2_3:-50774412 Msa0297120:five_prime_UTR
ATTGAAAGTGAGATATGTCA+AGG 0.555285 2_3:-50774110 Msa0297120:CDS
ACACACATGCTAGATATCCT+AGG 0.557458 2_3:-50774427 Msa0297120:five_prime_UTR
AATATCTGTTTCAATTGCAG+AGG 0.558496 2_3:-50773582 Msa0297120:intron
AGAGCTTGTTAATCAAGGGA+AGG 0.567919 2_3:-50775927 Msa0297120:five_prime_UTR
CCGGGAGAAAAGGATTTACA+AGG 0.568192 2_3:-50773947 Msa0297120:CDS
GAATATGAAAGAGGGAAAGA+GGG 0.569378 2_3:+50776116 None:intergenic
GTTTCAAGTAATGCATCTAA+GGG 0.569956 2_3:-50770966 Msa0297120:CDS
GTCAATTTCTGAATCTAACA+AGG 0.573857 2_3:-50773466 Msa0297120:CDS
GATGAAGATTAGGATGGGGA+GGG 0.574527 2_3:+50776254 None:intergenic
GTTCAACAATCATACGAGCT+TGG 0.576193 2_3:+50775872 None:intergenic
AGTTATGACTGTACCATTTG+GGG 0.579606 2_3:+50774352 None:intergenic
CTTTAGACTGATAAAATAAG+GGG 0.580275 2_3:+50768960 None:intergenic
CAGTGCATGGAACAATTGAC+GGG 0.580953 2_3:-50771058 Msa0297120:CDS
ATAAGGTCTTAAAATCTCAA+AGG 0.582631 2_3:+50776181 None:intergenic
AAAAGATGAAGATTAGGATG+GGG 0.585022 2_3:+50776250 None:intergenic
CTGGGTTCTGAACAGCTGAA+AGG 0.586271 2_3:-50771002 Msa0297120:CDS
ATGGCAATATTATAGAGTTG+AGG 0.589764 2_3:+50768613 None:intergenic
CAGGCAAGTAAATGGAGGGA+TGG 0.589865 2_3:-50773872 Msa0297120:CDS
GAGGTTGCCGAGAGAGATGG+AGG 0.590668 2_3:+50776276 None:intergenic
GTTATTGAAGAATTTGACGC+AGG 0.592049 2_3:-50775495 Msa0297120:five_prime_UTR
GGCATTCATGACATCCCGAA+GGG 0.593955 2_3:+50773680 None:intergenic
GATGAAGAAGCAGAAGTCGT+TGG 0.596620 2_3:-50774567 Msa0297120:five_prime_UTR
GGAATCAGGCAAGTAAATGG+AGG 0.597083 2_3:-50773877 Msa0297120:CDS
TGAGTACACGCATGGTTCAG+AGG 0.597255 2_3:-50775895 Msa0297120:five_prime_UTR
AAAACTTCGAATATGAAAGA+GGG 0.597667 2_3:+50776108 None:intergenic
ACTGATCATCATCAGAAAGA+GGG 0.602064 2_3:-50772170 Msa0297120:CDS
GAGGTTTCCTGTCAAGCTGA+AGG 0.603772 2_3:-50774161 Msa0297120:CDS
AATATGAAAGAGGGAAAGAG+GGG 0.608138 2_3:+50776117 None:intergenic
TGCCTCTGAAATAATAACAC+TGG 0.608650 2_3:+50774527 None:intergenic
ATTTGATTTGCATGTGCAGA+GGG 0.613483 2_3:+50774233 None:intergenic
AAAGTGGTCCAAATGGTCCT+GGG 0.615287 2_3:-50773627 Msa0297120:CDS
TTCTCAAGGTAAGTATACTC+CGG 0.616449 2_3:+50773711 None:intergenic
TTGATGGATGAGTACACGCA+TGG 0.623070 2_3:-50775903 Msa0297120:five_prime_UTR
ACTTCTTCCAAGAAAAGAAG+AGG 0.623254 2_3:-50772035 Msa0297120:CDS
ATGTTGAAGTACAAATCCAA+TGG 0.623288 2_3:-50769117 Msa0297120:three_prime_UTR
AAACTGATTATGGGAAGCTG+AGG 0.625081 2_3:-50775775 Msa0297120:intron
ATAATGGCAGAAGTTTAAGC+CGG 0.625994 2_3:-50775465 Msa0297120:five_prime_UTR
CTTTCAGCTGTTCAGAACCC+AGG 0.626176 2_3:+50771003 None:intergenic
ATTGACGGGAAATTTGATGA+CGG 0.626327 2_3:-50771044 Msa0297120:CDS
ACACTCGGTTCTTCAGTGCA+TGG 0.628634 2_3:-50771071 Msa0297120:CDS
TCTGACCAAACAATGAAGAG+AGG 0.630683 2_3:-50774193 Msa0297120:CDS
ATTAGTCCAGCACAGACACT+CGG 0.635032 2_3:-50771086 Msa0297120:intron
GAATCAGGCAAGTAAATGGA+GGG 0.637456 2_3:-50773876 Msa0297120:CDS
TATATAGTCACAGTGGACCT+GGG 0.638161 2_3:-50771020 Msa0297120:CDS
TTGAAAGTGAGATATGTCAA+GGG 0.640541 2_3:-50774109 Msa0297120:CDS
TTATTGAAGAATTTGACGCA+GGG 0.643969 2_3:-50775494 Msa0297120:five_prime_UTR
CACCCTACTAGAAATTACCT+AGG 0.648151 2_3:+50774410 None:intergenic
AGGCATTCATGACATCCCGA+AGG 0.658440 2_3:+50773679 None:intergenic
ACTTTATCCAATGTATCCAA+CGG 0.659425 2_3:+50773645 None:intergenic
TATTGAAGAATTTGACGCAG+GGG 0.662300 2_3:-50775493 Msa0297120:five_prime_UTR
TCAATTTCTGAATCTAACAA+GGG 0.662842 2_3:-50773465 Msa0297120:CDS
GATTTGATTTGCATGTGCAG+AGG 0.664606 2_3:+50774232 None:intergenic
GGAGGAGGATGATAAGAACA+AGG 0.665193 2_3:-50772219 Msa0297120:CDS
TATGAAAGAGGGAAAGAGGG+GGG 0.680128 2_3:+50776119 None:intergenic
ATATGAAAGAGGGAAAGAGG+GGG 0.681399 2_3:+50776118 None:intergenic
AAATCTCAAAGGATTAAGTG+GGG 0.693569 2_3:+50776192 None:intergenic
GCATTCATGACATCCCGAAG+GGG 0.694831 2_3:+50773681 None:intergenic
TCAAGGTAAGTATACTCCGG+AGG 0.704070 2_3:+50773714 None:intergenic
ATATCTTGTGTAAATTATGG+CGG 0.719589 2_3:-50769047 Msa0297120:three_prime_UTR
TCTGCATAGTGAAATCACCC+AGG 0.720378 2_3:+50773610 None:intergenic
TGACGGATATATAGTCACAG+TGG 0.767267 2_3:-50771027 Msa0297120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATCTGAAATAAATAAAA+GGG + chr2_3:50770313-50770332 None:intergenic 10.0%
!! TAAAATTAGTAATATATGTA+TGG - chr2_3:50774750-50774769 Msa0297120:intron 10.0%
!!! ATAAATCTATAAATGTTTTA+AGG + chr2_3:50775062-50775081 None:intergenic 10.0%
!!! GAATATCTGAAATAAATAAA+AGG + chr2_3:50770314-50770333 None:intergenic 15.0%
!! TTTATTTATTTCAGATATTC+AGG - chr2_3:50770314-50770333 Msa0297120:intron 15.0%
!!! AACTTTAAAGGATTTTTAAA+TGG - chr2_3:50770623-50770642 Msa0297120:intron 15.0%
!!! TTGTTTTGAAATTTTGATTT+TGG - chr2_3:50770854-50770873 Msa0297120:intron 15.0%
!!! AGTTTTTTTTTTCTTTTTTG+TGG - chr2_3:50770908-50770927 Msa0297120:intron 15.0%
!!! ATTTGTTATGTATAACATAT+TGG - chr2_3:50771722-50771741 Msa0297120:intron 15.0%
!!! TTTGTTATGTATAACATATT+GGG - chr2_3:50771723-50771742 Msa0297120:intron 15.0%
!!! TGAAATTTTGAATTATTGTA+AGG + chr2_3:50774175-50774194 None:intergenic 15.0%
!!! TTCAAGAATTTTTATAAGAT+CGG - chr2_3:50774341-50774360 Msa0297120:five_prime_UTR 15.0%
!!! TGATTTTAAGAAGAAAAAAA+AGG - chr2_3:50774415-50774434 Msa0297120:five_prime_UTR 15.0%
!!! GATTTTAAGAAGAAAAAAAA+GGG - chr2_3:50774416-50774435 Msa0297120:five_prime_UTR 15.0%
!! AACATTTATAGATTTATTGT+TGG - chr2_3:50775065-50775084 Msa0297120:intron 15.0%
!!! TTATTTTGTTAATTTAATGC+AGG - chr2_3:50775741-50775760 Msa0297120:intron 15.0%
!! AATAATGCTTAAAATGTATG+AGG - chr2_3:50768858-50768877 Msa0297120:intron 20.0%
!! AATCATAATTGAGCAATTAT+TGG - chr2_3:50769226-50769245 Msa0297120:intron 20.0%
!! TTATGCAAAATCATATGAAT+TGG - chr2_3:50769646-50769665 Msa0297120:intron 20.0%
!! ACTTATAGAAATGATTTGAA+AGG - chr2_3:50769709-50769728 Msa0297120:intron 20.0%
!! TGAAATAAATAAAAGGGATT+GGG + chr2_3:50770307-50770326 None:intergenic 20.0%
!!! AATTTTCATATCTTATTCAG+AGG - chr2_3:50770434-50770453 Msa0297120:intron 20.0%
!! ATACCAAAAAAGAACTTTAA+AGG - chr2_3:50770611-50770630 Msa0297120:intron 20.0%
!!! AATCCTTTAAAGTTCTTTTT+TGG + chr2_3:50770617-50770636 None:intergenic 20.0%
!! AAATTACATGTTTAATCAAC+AGG + chr2_3:50771424-50771443 None:intergenic 20.0%
!! AACAAATAAAAAAGATACCT+GGG + chr2_3:50771595-50771614 None:intergenic 20.0%
!! TAACAAATAAAAAAGATACC+TGG + chr2_3:50771596-50771615 None:intergenic 20.0%
!!! TACAAAATTTTGTCAAATTG+CGG - chr2_3:50771688-50771707 Msa0297120:intron 20.0%
!! ATTATGAGACAAACAAAATA+TGG - chr2_3:50772331-50772350 Msa0297120:intron 20.0%
!! TTATGAGACAAACAAAATAT+GGG - chr2_3:50772332-50772351 Msa0297120:intron 20.0%
!!! TATAATATTTTTCTGTGATG+TGG - chr2_3:50773159-50773178 Msa0297120:intron 20.0%
!!! TCTTTTCTTTAATTTAGACT+TGG - chr2_3:50773320-50773339 Msa0297120:intron 20.0%
!!! TTCAAAAGCATAAAAAGAAA+TGG + chr2_3:50774083-50774102 None:intergenic 20.0%
!!! TTTCTTTTTATGCTTTTGAA+TGG - chr2_3:50774083-50774102 Msa0297120:intron 20.0%
!! CAATTCTACTTATGAAAAAA+TGG - chr2_3:50775319-50775338 Msa0297120:intron 20.0%
!!! TCTTAGTTCTATATGAAAAT+AGG - chr2_3:50775344-50775363 Msa0297120:intron 20.0%
!!! CTTAGTTCTATATGAAAATA+GGG - chr2_3:50775345-50775364 Msa0297120:intron 20.0%
!! ACTTTAGACTGATAAAATAA+GGG + chr2_3:50775972-50775991 None:intergenic 20.0%
!! AACTTTAGACTGATAAAATA+AGG + chr2_3:50775973-50775992 None:intergenic 20.0%
! AAAATCTCAAAGGATTAAGT+GGG + chr2_3:50768740-50768759 None:intergenic 25.0%
! TAAAATCTCAAAGGATTAAG+TGG + chr2_3:50768741-50768760 None:intergenic 25.0%
! ATAAGGTCTTAAAATCTCAA+AGG + chr2_3:50768750-50768769 None:intergenic 25.0%
! AAAACTTCGAATATGAAAGA+GGG + chr2_3:50768823-50768842 None:intergenic 25.0%
! AGTAAGGAAGATTAAATCTA+GGG - chr2_3:50768928-50768947 Msa0297120:three_prime_UTR 25.0%
! ATGTTAAAATTGTTGGACTA+GGG - chr2_3:50769088-50769107 Msa0297120:three_prime_UTR 25.0%
! TGTTGAGTTCTGTTATTATT+TGG - chr2_3:50769183-50769202 Msa0297120:intron 25.0%
! GTTGAGTTCTGTTATTATTT+GGG - chr2_3:50769184-50769203 Msa0297120:intron 25.0%
!! AAATTCGTCAAACGTTTTAA+TGG + chr2_3:50769350-50769369 None:intergenic 25.0%
! TTAAAACGTTTGACGAATTT+CGG - chr2_3:50769350-50769369 Msa0297120:intron 25.0%
! TTCTTCAATAACTAAATCCT+TGG + chr2_3:50769425-50769444 None:intergenic 25.0%
! AAAGAAATGATTCGAACTAA+AGG + chr2_3:50769532-50769551 None:intergenic 25.0%
!! CAATACAAACGAGATTTTAA+TGG - chr2_3:50769576-50769595 Msa0297120:intron 25.0%
! GATAGAATGATGATAGTATT+AGG - chr2_3:50770132-50770151 Msa0297120:intron 25.0%
! GAAATAAATAAAAGGGATTG+GGG + chr2_3:50770306-50770325 None:intergenic 25.0%
! CTGAAATAAATAAAAGGGAT+TGG + chr2_3:50770308-50770327 None:intergenic 25.0%
!! TTTTCAAAATAATCCCCAAA+TGG - chr2_3:50770563-50770582 Msa0297120:intron 25.0%
! GTTAACAGTTATTAATGAGT+TGG - chr2_3:50770645-50770664 Msa0297120:intron 25.0%
!!! TTATTGTTTTTTTGCTTGTG+TGG - chr2_3:50771079-50771098 Msa0297120:CDS 25.0%
!!! TATTGTTTTTTTGCTTGTGT+GGG - chr2_3:50771080-50771099 Msa0297120:intron 25.0%
!!! AATTTTGATGAACTGTTTGT+AGG - chr2_3:50771439-50771458 Msa0297120:intron 25.0%
!!! ATTTTGATGAACTGTTTGTA+GGG - chr2_3:50771440-50771459 Msa0297120:intron 25.0%
! TCAATTTCTGAATCTAACAA+GGG - chr2_3:50771463-50771482 Msa0297120:intron 25.0%
! TGTAATGACATAATGTTTGT+CGG - chr2_3:50771814-50771833 Msa0297120:intron 25.0%
! GACGTTAAATAAAACAATAC+AGG + chr2_3:50771890-50771909 None:intergenic 25.0%
!! TTTTGTATGTTAGAAGCAAT+AGG + chr2_3:50772244-50772263 None:intergenic 25.0%
! TATGAGACAAACAAAATATG+GGG - chr2_3:50772333-50772352 Msa0297120:intron 25.0%
! TAGCTTTCATAAGCATAAAA+AGG - chr2_3:50772441-50772460 Msa0297120:intron 25.0%
! TAATTTATAGGTCGTGAAAT+TGG - chr2_3:50772473-50772492 Msa0297120:intron 25.0%
! TGAAAATGTAGAATCATTCA+TGG + chr2_3:50772795-50772814 None:intergenic 25.0%
!! TTCTACATTTTCATTGCAAT+TGG - chr2_3:50772802-50772821 Msa0297120:intron 25.0%
! TCAAAAAATAAGAGAGAAGA+AGG - chr2_3:50772935-50772954 Msa0297120:intron 25.0%
! TGTAATACCTCTAATATTCT+TGG + chr2_3:50772996-50773015 None:intergenic 25.0%
!!! GATATTTGATTGACTTCTTT+TGG - chr2_3:50773201-50773220 Msa0297120:intron 25.0%
!!! TGATTCTTTTGTTTTGAAAC+TGG - chr2_3:50773264-50773283 Msa0297120:intron 25.0%
! AGAAAAGAATCATCTATGAA+TGG + chr2_3:50773308-50773327 None:intergenic 25.0%
! AACAAAGTTCTTATCTATGT+TGG - chr2_3:50773756-50773775 Msa0297120:CDS 25.0%
!! ATATACTTTTCGTTTATGTC+TGG - chr2_3:50773786-50773805 Msa0297120:intron 25.0%
!! ATATCTGGAATAGTTTATTC+AGG - chr2_3:50774669-50774688 Msa0297120:intron 25.0%
! GTTACAAATAATTGATCACT+AGG + chr2_3:50774949-50774968 None:intergenic 25.0%
! AAAAGACAACATGATAACTA+TGG + chr2_3:50775162-50775181 None:intergenic 25.0%
!!! AGACCTAACTATTTTTCTAT+TGG - chr2_3:50775219-50775238 Msa0297120:intron 25.0%
! AAGCCAATAGAAAAATAGTT+AGG + chr2_3:50775225-50775244 None:intergenic 25.0%
! AGGGCTATAATATAATAGTA+AGG - chr2_3:50775364-50775383 Msa0297120:intron 25.0%
! TCTTCGAATTAATTAGTATG+CGG - chr2_3:50775410-50775429 Msa0297120:intron 25.0%
! AAGTTGCATAATGATATGAA+TGG + chr2_3:50775463-50775482 None:intergenic 25.0%
!!! TAGAACTTGGTCTTATATTT+TGG - chr2_3:50775690-50775709 Msa0297120:intron 25.0%
! TAATTTAATGCAGGTTTATC+AGG - chr2_3:50775750-50775769 Msa0297120:intron 25.0%
! TGAGAGATAAAGAAAGATAT+AGG - chr2_3:50775782-50775801 Msa0297120:five_prime_UTR 25.0%
! GACATATCTTGTGTAAATTA+TGG - chr2_3:50775878-50775897 Msa0297120:five_prime_UTR 25.0%
! ATATCTTGTGTAAATTATGG+CGG - chr2_3:50775881-50775900 Msa0297120:five_prime_UTR 25.0%
! TTGTAGTTCTTCTTAAATCA+TGG - chr2_3:50775943-50775962 Msa0297120:five_prime_UTR 25.0%
! CTTTAGACTGATAAAATAAG+GGG + chr2_3:50775971-50775990 None:intergenic 25.0%
!! GTCTAAAGTTAATCAATGAA+TGG - chr2_3:50775983-50776002 Msa0297120:five_prime_UTR 25.0%
! GATAAGCTCATTATAATTCA+AGG - chr2_3:50776025-50776044 Msa0297120:five_prime_UTR 25.0%
AAAAGATGAAGATTAGGATG+GGG + chr2_3:50768681-50768700 None:intergenic 30.0%
GAAAAGATGAAGATTAGGAT+GGG + chr2_3:50768682-50768701 None:intergenic 30.0%
TGAAAAGATGAAGATTAGGA+TGG + chr2_3:50768683-50768702 None:intergenic 30.0%
AAATCTCAAAGGATTAAGTG+GGG + chr2_3:50768739-50768758 None:intergenic 30.0%
CAAAACTTCGAATATGAAAG+AGG + chr2_3:50768824-50768843 None:intergenic 30.0%
! AAAATGTATGAGGTTGTTTC+TGG - chr2_3:50768868-50768887 Msa0297120:intron 30.0%
CAGTAAGGAAGATTAAATCT+AGG - chr2_3:50768927-50768946 Msa0297120:three_prime_UTR 30.0%
!! AACAAGAGCTTGTTAATCAA+GGG - chr2_3:50768997-50769016 Msa0297120:three_prime_UTR 30.0%
GTATGATTGTTGAACTGATT+GGG - chr2_3:50769064-50769083 Msa0297120:three_prime_UTR 30.0%
ATTGGGCATGTTAAAATTGT+TGG - chr2_3:50769081-50769100 Msa0297120:three_prime_UTR 30.0%
CATGTTAAAATTGTTGGACT+AGG - chr2_3:50769087-50769106 Msa0297120:three_prime_UTR 30.0%
CTGTTTGGAAAACTGATTAT+GGG - chr2_3:50769144-50769163 Msa0297120:exon 30.0%
AAACTTATAGCCGAATTGAA+GGG + chr2_3:50769275-50769294 None:intergenic 30.0%
!! AATGCTGTAATTTGTTTACG+CGG - chr2_3:50769307-50769326 Msa0297120:intron 30.0%
!! CGTACTTTAAAATCATCTAC+AGG + chr2_3:50769389-50769408 None:intergenic 30.0%
TTATTGAAGAATTTGACGCA+GGG - chr2_3:50769434-50769453 Msa0297120:intron 30.0%
!! ACCACGTTATCTTTTAGTTA+TGG + chr2_3:50770011-50770030 None:intergenic 30.0%
AAGACTGTATAAATCCGAAA+TGG - chr2_3:50770197-50770216 Msa0297120:intron 30.0%
AGACTGTATAAATCCGAAAT+GGG - chr2_3:50770198-50770217 Msa0297120:intron 30.0%
ATGTGTGTTAAACTTGGTAT+TGG + chr2_3:50770489-50770508 None:intergenic 30.0%
!! TATCCTAGGTAATTTCTAGT+AGG - chr2_3:50770515-50770534 Msa0297120:intron 30.0%
!! ATCCTAGGTAATTTCTAGTA+GGG - chr2_3:50770516-50770535 Msa0297120:intron 30.0%
TAGTTATGACTGTACCATTT+GGG + chr2_3:50770580-50770599 None:intergenic 30.0%
TTAGTTATGACTGTACCATT+TGG + chr2_3:50770581-50770600 None:intergenic 30.0%
ATTGAAAGTGAGATATGTCA+AGG - chr2_3:50770818-50770837 Msa0297120:intron 30.0%
TTGAAAGTGAGATATGTCAA+GGG - chr2_3:50770819-50770838 Msa0297120:intron 30.0%
GTGAAATTGTGAATGATGTT+AGG - chr2_3:50770885-50770904 Msa0297120:intron 30.0%
TTTATTCGTGAATGATGTGT+AGG - chr2_3:50770950-50770969 Msa0297120:intron 30.0%
!!! TGTTGTTTTTTGTTGAGAGT+AGG - chr2_3:50771141-50771160 Msa0297120:intron 30.0%
ACTTTATCCAATGTATCCAA+CGG + chr2_3:50771286-50771305 None:intergenic 30.0%
AATATCTGTTTCAATTGCAG+AGG - chr2_3:50771346-50771365 Msa0297120:intron 30.0%
GTCAATTTCTGAATCTAACA+AGG - chr2_3:50771462-50771481 Msa0297120:intron 30.0%
! TGTGGTAATACTTTTACTAC+AGG + chr2_3:50771563-50771582 None:intergenic 30.0%
GTAACAGTAAGGATCTAAAA+TGG + chr2_3:50771840-50771859 None:intergenic 30.0%
! TTTTAGCGTAAGTAACAGTA+AGG + chr2_3:50771851-50771870 None:intergenic 30.0%
TTACTTACGCTAAAATCAGA+AGG - chr2_3:50771856-50771875 Msa0297120:intron 30.0%
TAACCCTATCACACTTAATA+CGG - chr2_3:50772037-50772056 Msa0297120:CDS 30.0%
!!! TTTGTTTTTTCTTCCTGTTC+TGG + chr2_3:50772186-50772205 None:intergenic 30.0%
AGGACACCAAAGTAATTTAT+AGG - chr2_3:50772461-50772480 Msa0297120:intron 30.0%
TCACGACCTATAAATTACTT+TGG + chr2_3:50772470-50772489 None:intergenic 30.0%
TTGTTCTTGTAGCCAAAAAA+TGG - chr2_3:50772688-50772707 Msa0297120:intron 30.0%
ACTTCTTCCAAGAATATTAG+AGG - chr2_3:50772986-50773005 Msa0297120:intron 30.0%
GGACGTATAGTCAATATTAT+TGG + chr2_3:50773065-50773084 None:intergenic 30.0%
TCTATCATAAGTTGTGTTGA+TGG + chr2_3:50773395-50773414 None:intergenic 30.0%
ATTATGACATCGTTTGATCT+GGG - chr2_3:50773417-50773436 Msa0297120:intron 30.0%
! TGTTTCAAGTAATGCATCTA+AGG - chr2_3:50773961-50773980 Msa0297120:intron 30.0%
! GTTTCAAGTAATGCATCTAA+GGG - chr2_3:50773962-50773981 Msa0297120:intron 30.0%
CATACAAAAGAAATCACGAT+TGG - chr2_3:50774015-50774034 Msa0297120:intron 30.0%
TATATCGACCGAAATCAAAT+AGG - chr2_3:50774049-50774068 Msa0297120:intron 30.0%
! TAACCACTCCTATTTGATTT+CGG + chr2_3:50774060-50774079 None:intergenic 30.0%
! ATGCTTTTGAATGGCTTATT+TGG - chr2_3:50774092-50774111 Msa0297120:intron 30.0%
GTTAAGAAACCAACAAGAAA+GGG + chr2_3:50774477-50774496 None:intergenic 30.0%
AGTTAAGAAACCAACAAGAA+AGG + chr2_3:50774478-50774497 None:intergenic 30.0%
GGAAAGGTTAATTGTATATC+TGG - chr2_3:50774654-50774673 Msa0297120:intron 30.0%
AATAGTTTATTCAGGCACAT+AGG - chr2_3:50774677-50774696 Msa0297120:intron 30.0%
! TAGGCATTTTCTTTCATTTC+AGG - chr2_3:50774696-50774715 Msa0297120:intron 30.0%
! AAAGCAGTGTTGTTAAATAG+AGG - chr2_3:50774849-50774868 Msa0297120:intron 30.0%
!!! TTTTCTATTGGCTTCTTAAG+AGG - chr2_3:50775231-50775250 Msa0297120:intron 30.0%
!! TGACATAGACTATTTCTACA+GGG + chr2_3:50775260-50775279 None:intergenic 30.0%
!! TTGACATAGACTATTTCTAC+AGG + chr2_3:50775261-50775280 None:intergenic 30.0%
TGTAGAAATAGTCTATGTCA+AGG - chr2_3:50775260-50775279 Msa0297120:intron 30.0%
AGTCTATGTCAAGGAATATT+AGG - chr2_3:50775269-50775288 Msa0297120:intron 30.0%
ATGTTGAAGTACAAATCCAA+TGG - chr2_3:50775811-50775830 Msa0297120:five_prime_UTR 30.0%
! TAAGCTATCTGTTTTCTCAT+GGG + chr2_3:50775843-50775862 None:intergenic 30.0%
ATTCCAACTCATTAGTATCT+AGG - chr2_3:50776155-50776174 Msa0297120:five_prime_UTR 30.0%
ATCTAGAAAAACTATCAGAG+AGG + chr2_3:50776194-50776213 None:intergenic 30.0%
GTAAAAATAACATCAAGTGG+AGG + chr2_3:50776245-50776264 None:intergenic 30.0%
GTGGTAAAAATAACATCAAG+TGG + chr2_3:50776248-50776267 None:intergenic 30.0%
! ATTTTTACCACAGAATCTAC+AGG - chr2_3:50776257-50776276 Msa0297120:five_prime_UTR 30.0%
TGGGTGAAAAGATGAAGATT+AGG + chr2_3:50768687-50768706 None:intergenic 35.0%
GATGGTTGCATGTTGATATT+GGG + chr2_3:50768717-50768736 None:intergenic 35.0%
GGAGAGATTGAGTTTGTATA+AGG + chr2_3:50768767-50768786 None:intergenic 35.0%
AATATGAAAGAGGGAAAGAG+GGG + chr2_3:50768814-50768833 None:intergenic 35.0%
GAATATGAAAGAGGGAAAGA+GGG + chr2_3:50768815-50768834 None:intergenic 35.0%
TTGTGGCTTAACTGGTAATT+AGG - chr2_3:50768891-50768910 Msa0297120:intron 35.0%
TAACTGGTAATTAGGAGCAA+AGG - chr2_3:50768899-50768918 Msa0297120:intron 35.0%
AACTGGTAATTAGGAGCAAA+GGG - chr2_3:50768900-50768919 Msa0297120:three_prime_UTR 35.0%
!! GAACAAGAGCTTGTTAATCA+AGG - chr2_3:50768996-50769015 Msa0297120:three_prime_UTR 35.0%
TTAATCAAGGGAAGGTTTGA+TGG - chr2_3:50769009-50769028 Msa0297120:three_prime_UTR 35.0%
CGTATGATTGTTGAACTGAT+TGG - chr2_3:50769063-50769082 Msa0297120:three_prime_UTR 35.0%
GCTGTTTGGAAAACTGATTA+TGG - chr2_3:50769143-50769162 Msa0297120:exon 35.0%
GAAACTTATAGCCGAATTGA+AGG + chr2_3:50769276-50769295 None:intergenic 35.0%
!! ATGCTGTAATTTGTTTACGC+GGG - chr2_3:50769308-50769327 Msa0297120:intron 35.0%
TCATCTACAGGTTTCAATAC+TGG + chr2_3:50769377-50769396 None:intergenic 35.0%
GTTATTGAAGAATTTGACGC+AGG - chr2_3:50769433-50769452 Msa0297120:intron 35.0%
TATTGAAGAATTTGACGCAG+GGG - chr2_3:50769435-50769454 Msa0297120:intron 35.0%
ATAATGGCAGAAGTTTAAGC+CGG - chr2_3:50769463-50769482 Msa0297120:intron 35.0%
! AACTAAACTCAGCTTTTCTC+CGG + chr2_3:50769485-50769504 None:intergenic 35.0%
TAGTTTCCGCAAAATGTTTG+AGG - chr2_3:50769500-50769519 Msa0297120:intron 35.0%
! AACTCACCTCAAACATTTTG+CGG + chr2_3:50769509-50769528 None:intergenic 35.0%
TATCTCTTCGTTGTAGCAAA+CGG + chr2_3:50769798-50769817 None:intergenic 35.0%
AAGAGATAATGTAGCCTATG+AGG - chr2_3:50769810-50769829 Msa0297120:intron 35.0%
ATAATGTAGCCTATGAGGTA+TGG - chr2_3:50769815-50769834 Msa0297120:intron 35.0%
TATCTCTTCGTTGTAGCAAA+CGG + chr2_3:50769798-50769817 None:intergenic 35.0%
AAGAGATAATGTAGCCTATG+AGG - chr2_3:50769810-50769829 Msa0297120:intron 35.0%
TATCTCTTCGTTGTAGCAAA+CGG + chr2_3:50769798-50769817 None:intergenic 35.0%
GCCATAACTAAAAGATAACG+TGG - chr2_3:50770007-50770026 Msa0297120:intron 35.0%
ATCATACATAACTGAGCGAT+CGG + chr2_3:50770176-50770195 None:intergenic 35.0%
! GTTCTAAACTCAACCCATTT+CGG + chr2_3:50770214-50770233 None:intergenic 35.0%
!! TGCCTCTGAAATAATAACAC+TGG + chr2_3:50770404-50770423 None:intergenic 35.0%
TCTAGCATGTGTGTTAAACT+TGG + chr2_3:50770495-50770514 None:intergenic 35.0%
AGTTATGACTGTACCATTTG+GGG + chr2_3:50770579-50770598 None:intergenic 35.0%
!! ATTTGATTTGCATGTGCAGA+GGG + chr2_3:50770698-50770717 None:intergenic 35.0%
ACAAGGTGTGATCAAAGATT+CGG - chr2_3:50770998-50771017 Msa0297120:CDS 35.0%
GCATGCAACTCAAAAACATT+CGG + chr2_3:50771175-50771194 None:intergenic 35.0%
!!! AATGTTTTTGAGTTGCATGC+TGG - chr2_3:50771175-50771194 Msa0297120:intron 35.0%
TTCTCAAGGTAAGTATACTC+CGG + chr2_3:50771220-50771239 None:intergenic 35.0%
GAGTATACTTACCTTGAGAA+TGG - chr2_3:50771220-50771239 Msa0297120:intron 35.0%
GTTGGATACATTGGATAAAG+TGG - chr2_3:50771285-50771304 Msa0297120:intron 35.0%
ATTGGATAAAGTGGTCCAAA+TGG - chr2_3:50771294-50771313 Msa0297120:intron 35.0%
AATTACATAGTGTCACAGCT+AGG + chr2_3:50771395-50771414 None:intergenic 35.0%
TGACCGTATTAAGTGTGATA+GGG + chr2_3:50772043-50772062 None:intergenic 35.0%
TTGACCGTATTAAGTGTGAT+AGG + chr2_3:50772044-50772063 None:intergenic 35.0%
GAAGAAACAAAGAGTTGAGA+TGG - chr2_3:50772282-50772301 Msa0297120:intron 35.0%
AGTTGAGATGGAATACTCTT+GGG - chr2_3:50772294-50772313 Msa0297120:intron 35.0%
AGACAAACAAAATATGGGGA+AGG - chr2_3:50772337-50772356 Msa0297120:intron 35.0%
CAACTCACTACTGCTTATAA+TGG + chr2_3:50772401-50772420 None:intergenic 35.0%
TTATGAAAGCTACTCTTGGA+TGG + chr2_3:50772433-50772452 None:intergenic 35.0%
ATGCTTATGAAAGCTACTCT+TGG + chr2_3:50772437-50772456 None:intergenic 35.0%
TTCTTGTAGCCAAAAAATGG+AGG - chr2_3:50772691-50772710 Msa0297120:intron 35.0%
!!! TATCATCCTCCTCCATTTTT+TGG + chr2_3:50772703-50772722 None:intergenic 35.0%
TACTGATCATCATCAGAAAG+AGG - chr2_3:50772757-50772776 Msa0297120:intron 35.0%
ACTGATCATCATCAGAAAGA+GGG - chr2_3:50772758-50772777 Msa0297120:intron 35.0%
ACTTCTTCCAAGAAAAGAAG+AGG - chr2_3:50772893-50772912 Msa0297120:intron 35.0%
!!! GCAGAAGTAGTTTTTTCAGA+AGG + chr2_3:50772962-50772981 None:intergenic 35.0%
TATACGTCCATCATGAGTTA+GGG - chr2_3:50773076-50773095 Msa0297120:intron 35.0%
ATGTATACCCTAACTCATGA+TGG + chr2_3:50773086-50773105 None:intergenic 35.0%
CATTATGACATCGTTTGATC+TGG - chr2_3:50773416-50773435 Msa0297120:intron 35.0%
ATTTACTGCCATAAGCACAT+AGG - chr2_3:50773491-50773510 Msa0297120:intron 35.0%
ATTGACGGGAAATTTGATGA+CGG - chr2_3:50773884-50773903 Msa0297120:CDS 35.0%
TTGGTCCAATTTCAATGTTC+CGG - chr2_3:50774111-50774130 Msa0297120:CDS 35.0%
AAAACCCGGAACATTGAAAT+TGG + chr2_3:50774119-50774138 None:intergenic 35.0%
! ATTTCAATGTTCCGGGTTTT+TGG - chr2_3:50774119-50774138 Msa0297120:CDS 35.0%
! TTTCAATGTTCCGGGTTTTT+GGG - chr2_3:50774120-50774139 Msa0297120:CDS 35.0%
AAACCAACAAGAAAGGGAAA+AGG + chr2_3:50774471-50774490 None:intergenic 35.0%
GTTTCTTAACTCCCAAACAA+GGG - chr2_3:50774487-50774506 Msa0297120:five_prime_UTR 35.0%
AGCCTTAACATATTTGTCTC+TGG - chr2_3:50774601-50774620 Msa0297120:five_prime_UTR 35.0%
AGCCAGAGACAAATATGTTA+AGG + chr2_3:50774606-50774625 None:intergenic 35.0%
GCTTGTTTAACGATGATGAA+GGG - chr2_3:50774623-50774642 Msa0297120:intron 35.0%
CTTGTTTAACGATGATGAAG+GGG - chr2_3:50774624-50774643 Msa0297120:intron 35.0%
CGTTAACTTTGTTCTCTGAT+TGG - chr2_3:50774809-50774828 Msa0297120:intron 35.0%
!!! CATTTTTTGCAATCTCCGAT+CGG - chr2_3:50774912-50774931 Msa0297120:intron 35.0%
TAATTGATCACTAGGCAACA+GGG + chr2_3:50774941-50774960 None:intergenic 35.0%
ATAATTGATCACTAGGCAAC+AGG + chr2_3:50774942-50774961 None:intergenic 35.0%
! AATTGCATGAATCCCACTTT+TGG + chr2_3:50775037-50775056 None:intergenic 35.0%
TTATTGTTGGAGTCTGTGAA+AGG - chr2_3:50775078-50775097 Msa0297120:intron 35.0%
CTATGGCTACAACTAGAAAA+GGG + chr2_3:50775145-50775164 None:intergenic 35.0%
ACTATGGCTACAACTAGAAA+AGG + chr2_3:50775146-50775165 None:intergenic 35.0%
TCTGTATCTATAAAGCCTGT+GGG + chr2_3:50775202-50775221 None:intergenic 35.0%
!! GACATAGACTATTTCTACAG+GGG + chr2_3:50775259-50775278 None:intergenic 35.0%
CTATGTCAAGGAATATTAGG+AGG - chr2_3:50775272-50775291 Msa0297120:intron 35.0%
TCTATGTAGTGAGATGTGAT+TGG - chr2_3:50775519-50775538 Msa0297120:five_prime_UTR 35.0%
TGCTCTTATCTGTTAGAACT+TGG - chr2_3:50775677-50775696 Msa0297120:intron 35.0%
! AAGCTATCTGTTTTCTCATG+GGG + chr2_3:50775842-50775861 None:intergenic 35.0%
! CTAAGCTATCTGTTTTCTCA+TGG + chr2_3:50775844-50775863 None:intergenic 35.0%
GAGTTGGAATGAGATGTATA+TGG + chr2_3:50776145-50776164 None:intergenic 35.0%
ATCAGAGAGGCTATTAAGAA+AGG + chr2_3:50776181-50776200 None:intergenic 35.0%
! TAGATCTTCTTTTGCCTCTT+AGG - chr2_3:50776209-50776228 Msa0297120:five_prime_UTR 35.0%
GAGGATAATCAAATCCTAAG+AGG + chr2_3:50776226-50776245 None:intergenic 35.0%
TCAGCTTCTTAGAGAGAGAA+TGG + chr2_3:50768622-50768641 None:intergenic 40.0%
GTTGCATGTTGATATTGGGT+GGG + chr2_3:50768713-50768732 None:intergenic 40.0%
GGATGGTTGCATGTTGATAT+TGG + chr2_3:50768718-50768737 None:intergenic 40.0%
ATATGAAAGAGGGAAAGAGG+GGG + chr2_3:50768813-50768832 None:intergenic 40.0%
CGAATATGAAAGAGGGAAAG+AGG + chr2_3:50768816-50768835 None:intergenic 40.0%
!! TATGAGGTTGTTTCTGGTTG+TGG - chr2_3:50768874-50768893 Msa0297120:intron 40.0%
! AGGAAGATTAAATCTAGGGC+TGG - chr2_3:50768932-50768951 Msa0297120:three_prime_UTR 40.0%
TGGAATATTGAGCTGAAGCT+TGG - chr2_3:50768952-50768971 Msa0297120:three_prime_UTR 40.0%
GGAATATTGAGCTGAAGCTT+GGG - chr2_3:50768953-50768972 Msa0297120:three_prime_UTR 40.0%
!! AGAGCTTGTTAATCAAGGGA+AGG - chr2_3:50769001-50769020 Msa0297120:three_prime_UTR 40.0%
GTTCAACAATCATACGAGCT+TGG + chr2_3:50769059-50769078 None:intergenic 40.0%
GAAGCTGTGTATAAGCTGTT+TGG - chr2_3:50769129-50769148 Msa0297120:three_prime_UTR 40.0%
AAACTGATTATGGGAAGCTG+AGG - chr2_3:50769153-50769172 Msa0297120:exon 40.0%
ACGCGTAATTCCCTTCAATT+CGG - chr2_3:50769262-50769281 Msa0297120:intron 40.0%
!! TGCTGTAATTTGTTTACGCG+GGG - chr2_3:50769309-50769328 Msa0297120:intron 40.0%
!! AATTTGTTTACGCGGGGTTT+TGG - chr2_3:50769315-50769334 Msa0297120:intron 40.0%
! ATTTGTTTACGCGGGGTTTT+GGG - chr2_3:50769316-50769335 Msa0297120:intron 40.0%
! TACGAGTTTGTTCTGATCCA+AGG - chr2_3:50769405-50769424 Msa0297120:intron 40.0%
TACTATGAGCCATACCTCAT+AGG + chr2_3:50769827-50769846 None:intergenic 40.0%
TACTATGAGTCGTACCTCAT+AGG + chr2_3:50769895-50769914 None:intergenic 40.0%
AAGAGATAACGTAGCCTATG+AGG - chr2_3:50769947-50769966 Msa0297120:intron 40.0%
ATAACGTAGCCTATGAGGTA+CGG - chr2_3:50769952-50769971 Msa0297120:intron 40.0%
TCATACATAACTGAGCGATC+GGG + chr2_3:50770175-50770194 None:intergenic 40.0%
! TGGGTTGAGTTTAGAACAGA+TGG - chr2_3:50770217-50770236 Msa0297120:intron 40.0%
CAGGTTACTAGACGACAAAA+TGG - chr2_3:50770333-50770352 Msa0297120:intron 40.0%
! CGCCAGTGTTATTATTTCAG+AGG - chr2_3:50770399-50770418 Msa0297120:intron 40.0%
ACACACATGCTAGATATCCT+AGG - chr2_3:50770501-50770520 Msa0297120:intron 40.0%
CACCCTACTAGAAATTACCT+AGG + chr2_3:50770521-50770540 None:intergenic 40.0%
!! GATTTGATTTGCATGTGCAG+AGG + chr2_3:50770699-50770718 None:intergenic 40.0%
TCTGACCAAACAATGAAGAG+AGG - chr2_3:50770735-50770754 Msa0297120:intron 40.0%
CAGAACCTCTCTTCATTGTT+TGG + chr2_3:50770743-50770762 None:intergenic 40.0%
CAAACAATGAAGAGAGGTTC+TGG - chr2_3:50770741-50770760 Msa0297120:intron 40.0%
TGAAGGATCTTCTTGCTACT+GGG - chr2_3:50770784-50770803 Msa0297120:intron 40.0%
GAGATATGTCAAGGGACAAA+AGG - chr2_3:50770827-50770846 Msa0297120:intron 40.0%
! CCTTGTAAATCCTTTTCTCC+CGG + chr2_3:50770984-50771003 None:intergenic 40.0%
CAAGGTGTGATCAAAGATTC+GGG - chr2_3:50770999-50771018 Msa0297120:CDS 40.0%
! TCGGGAATTTTGTGCTTTTG+TGG - chr2_3:50771017-50771036 Msa0297120:CDS 40.0%
! CGGGAATTTTGTGCTTTTGT+GGG - chr2_3:50771018-50771037 Msa0297120:CDS 40.0%
! TGCTTTTGTGGGAGTTGTAA+GGG - chr2_3:50771029-50771048 Msa0297120:CDS 40.0%
GAATCAGGCAAGTAAATGGA+GGG - chr2_3:50771052-50771071 Msa0297120:CDS 40.0%
TAGTGCTAATAAACGTCCTC+CGG - chr2_3:50771198-50771217 Msa0297120:intron 40.0%
TTGAGAATGGAAAACCCCTT+CGG - chr2_3:50771233-50771252 Msa0297120:intron 40.0%
AAGTCTTCCGTTGGATACAT+TGG - chr2_3:50771276-50771295 Msa0297120:intron 40.0%
ACTAGTATGCAATCCATGCA+TGG - chr2_3:50771495-50771514 Msa0297120:intron 40.0%
ATAACATATTGGGTGCATCG+TGG - chr2_3:50771733-50771752 Msa0297120:intron 40.0%
ACTTTCAGTTGTGTGTACTC+TGG - chr2_3:50771910-50771929 Msa0297120:intron 40.0%
GACACAAGCAGATGTAGAAT+AGG + chr2_3:50771960-50771979 None:intergenic 40.0%
ATTCTACATCTGCTTGTGTC+TGG - chr2_3:50771960-50771979 Msa0297120:CDS 40.0%
TTCTACATCTGCTTGTGTCT+GGG - chr2_3:50771961-50771980 Msa0297120:CDS 40.0%
! ATTCAGACTGTCTGGAATGT+AGG - chr2_3:50772113-50772132 Msa0297120:CDS 40.0%
! TTCAGACTGTCTGGAATGTA+GGG - chr2_3:50772114-50772133 Msa0297120:CDS 40.0%
!! AACATACAAAAGAGTGCTCG+AGG - chr2_3:50772253-50772272 Msa0297120:CDS 40.0%
!! ACATACAAAAGAGTGCTCGA+GGG - chr2_3:50772254-50772273 Msa0297120:CDS 40.0%
GAGTTGAGATGGAATACTCT+TGG - chr2_3:50772293-50772312 Msa0297120:intron 40.0%
GTTGAGATGGAATACTCTTG+GGG - chr2_3:50772295-50772314 Msa0297120:intron 40.0%
TTGAGATGGAATACTCTTGG+GGG - chr2_3:50772296-50772315 Msa0297120:intron 40.0%
TTGTAGCCAAAAAATGGAGG+AGG - chr2_3:50772694-50772713 Msa0297120:intron 40.0%
! GATGATAAGAACAAGGCATC+AGG - chr2_3:50772716-50772735 Msa0297120:intron 40.0%
ACACCCAAGAAGAGAAAAGA+AGG - chr2_3:50772842-50772861 Msa0297120:intron 40.0%
! GGTCCTTCTTTTCTCTTCTT+GGG + chr2_3:50772848-50772867 None:intergenic 40.0%
! AGGTCCTTCTTTTCTCTTCT+TGG + chr2_3:50772849-50772868 None:intergenic 40.0%
!!! GCAGAAGTTGTTTTAGCTTC+AGG + chr2_3:50772869-50772888 None:intergenic 40.0%
GAAGCTAAAACAACTTCTGC+AGG - chr2_3:50772869-50772888 Msa0297120:intron 40.0%
CTATACGTCCATCATGAGTT+AGG - chr2_3:50773075-50773094 Msa0297120:intron 40.0%
GTGATGTGGAAATAGAAGCA+AGG - chr2_3:50773173-50773192 Msa0297120:intron 40.0%
! ATCGAAAGCTTTATCGCACT+AGG + chr2_3:50773455-50773474 None:intergenic 40.0%
AACAGTCACCTATGTGCTTA+TGG + chr2_3:50773502-50773521 None:intergenic 40.0%
TAAGCACATAGGTGACTGTT+TGG - chr2_3:50773502-50773521 Msa0297120:intron 40.0%
AAGCACATAGGTGACTGTTT+GGG - chr2_3:50773503-50773522 Msa0297120:intron 40.0%
TCAGTGCATGGAACAATTGA+CGG - chr2_3:50773869-50773888 Msa0297120:CDS 40.0%
! TGACGGATATATAGTCACAG+TGG - chr2_3:50773901-50773920 Msa0297120:CDS 40.0%
ATATATAGTCACAGTGGACC+TGG - chr2_3:50773907-50773926 Msa0297120:CDS 40.0%
TATATAGTCACAGTGGACCT+GGG - chr2_3:50773908-50773927 Msa0297120:CDS 40.0%
TGGTCCAATTTCAATGTTCC+GGG - chr2_3:50774112-50774131 Msa0297120:CDS 40.0%
! TTCAATGTTCCGGGTTTTTG+GGG - chr2_3:50774121-50774140 Msa0297120:CDS 40.0%
! TCTCCTTTTCCCTTTCTTGT+TGG - chr2_3:50774465-50774484 Msa0297120:five_prime_UTR 40.0%
GGTTTCTTAACTCCCAAACA+AGG - chr2_3:50774486-50774505 Msa0297120:five_prime_UTR 40.0%
TTAACTCCCAAACAAGGGAA+GGG - chr2_3:50774492-50774511 Msa0297120:five_prime_UTR 40.0%
!!! CTTTGTTTGCGAGTTTTGAG+GGG + chr2_3:50774583-50774602 None:intergenic 40.0%
!!! GCTTTGTTTGCGAGTTTTGA+GGG + chr2_3:50774584-50774603 None:intergenic 40.0%
! GGCTTGTTTAACGATGATGA+AGG - chr2_3:50774622-50774641 Msa0297120:intron 40.0%
AGTTAACGTGCGTCAAGTTA+TGG + chr2_3:50774797-50774816 None:intergenic 40.0%
TCTGATTGGCAAACTAAGCT+AGG - chr2_3:50774823-50774842 Msa0297120:intron 40.0%
CGATCGGAGATTGCAAAAAA+TGG + chr2_3:50774914-50774933 None:intergenic 40.0%
TTCCTTGGAAAAGCCAAAAG+TGG - chr2_3:50775021-50775040 Msa0297120:intron 40.0%
TCCTTGGAAAAGCCAAAAGT+GGG - chr2_3:50775022-50775041 Msa0297120:intron 40.0%
GTCTGTATCTATAAAGCCTG+TGG + chr2_3:50775203-50775222 None:intergenic 40.0%
TGCAGGTTTATCAGGAGAAA+AGG - chr2_3:50775758-50775777 Msa0297120:intron 40.0%
AAGAACAAGAACCAGCCTTT+AGG - chr2_3:50776082-50776101 Msa0297120:five_prime_UTR 40.0%
AGAACAAGAACCAGCCTTTA+GGG - chr2_3:50776083-50776102 Msa0297120:five_prime_UTR 40.0%
ATCGATGTAGTTGACCCTAA+AGG + chr2_3:50776100-50776119 None:intergenic 40.0%
AGGCCTAGATACTAATGAGT+TGG + chr2_3:50776161-50776180 None:intergenic 40.0%
ATCTGGTAAGACTCGACTTA+GGG + chr2_3:50776287-50776306 None:intergenic 40.0%
TATCTGGTAAGACTCGACTT+AGG + chr2_3:50776288-50776307 None:intergenic 40.0%
TAAGTCGAGTCTTACCAGAT+AGG - chr2_3:50776287-50776306 Msa0297120:five_prime_UTR 40.0%
GATGAAGATTAGGATGGGGA+GGG + chr2_3:50768677-50768696 None:intergenic 45.0%
AGATGAAGATTAGGATGGGG+AGG + chr2_3:50768678-50768697 None:intergenic 45.0%
! GTTGATATTGGGTGGGCTTT+GGG + chr2_3:50768706-50768725 None:intergenic 45.0%
! TGTTGATATTGGGTGGGCTT+TGG + chr2_3:50768707-50768726 None:intergenic 45.0%
GGTTGCATGTTGATATTGGG+TGG + chr2_3:50768714-50768733 None:intergenic 45.0%
CTCAAAGGATTAAGTGGGGA+TGG + chr2_3:50768735-50768754 None:intergenic 45.0%
! CGGTGTTGGAAGAGAGAAAA+GGG + chr2_3:50768788-50768807 None:intergenic 45.0%
!! TCGGTGTTGGAAGAGAGAAA+AGG + chr2_3:50768789-50768808 None:intergenic 45.0%
TATGAAAGAGGGAAAGAGGG+GGG + chr2_3:50768812-50768831 None:intergenic 45.0%
!! GTTTCTGGTTGTGGCTTAAC+TGG - chr2_3:50768883-50768902 Msa0297120:intron 45.0%
GAAGCTTGGGAATTGCTTGA+AGG - chr2_3:50768966-50768985 Msa0297120:three_prime_UTR 45.0%
! TTGATGGATGAGTACACGCA+TGG - chr2_3:50769025-50769044 Msa0297120:three_prime_UTR 45.0%
TACTATGAGCCGTACCTCAT+AGG + chr2_3:50769964-50769983 None:intergenic 45.0%
CATACATAACTGAGCGATCG+GGG + chr2_3:50770174-50770193 None:intergenic 45.0%
TTAGAACAGATGGCGATCCT+AGG - chr2_3:50770227-50770246 Msa0297120:intron 45.0%
GATGAAGAAGCAGAAGTCGT+TGG - chr2_3:50770361-50770380 Msa0297120:intron 45.0%
ACACTGGCGTGAACTTCATA+TGG + chr2_3:50770388-50770407 None:intergenic 45.0%
GTCAGAAGAAGAGAGAGAGA+TGG + chr2_3:50770721-50770740 None:intergenic 45.0%
! TGAAGAGAGGTTCTGGTAAG+AGG - chr2_3:50770748-50770767 Msa0297120:intron 45.0%
AGAAGATCCTTCAGCTTGAC+AGG + chr2_3:50770777-50770796 None:intergenic 45.0%
CTGAAGGATCTTCTTGCTAC+TGG - chr2_3:50770783-50770802 Msa0297120:intron 45.0%
TCTTCTTGCTACTGGGATTC+TGG - chr2_3:50770791-50770810 Msa0297120:intron 45.0%
CCGGGAGAAAAGGATTTACA+AGG - chr2_3:50770981-50771000 Msa0297120:CDS 45.0%
! GTGCTTTTGTGGGAGTTGTA+AGG - chr2_3:50771028-50771047 Msa0297120:CDS 45.0%
! GCTTTTGTGGGAGTTGTAAG+GGG - chr2_3:50771030-50771049 Msa0297120:CDS 45.0%
AGGGGAATCAGGCAAGTAAA+TGG - chr2_3:50771048-50771067 Msa0297120:CDS 45.0%
GGAATCAGGCAAGTAAATGG+AGG - chr2_3:50771051-50771070 Msa0297120:CDS 45.0%
GTGTGGGTTTAGCATCTTGT+AGG - chr2_3:50771096-50771115 Msa0297120:intron 45.0%
TCAAGGTAAGTATACTCCGG+AGG + chr2_3:50771217-50771236 None:intergenic 45.0%
! GAAGGGGTTTTCCATTCTCA+AGG + chr2_3:50771234-50771253 None:intergenic 45.0%
TGAGAATGGAAAACCCCTTC+GGG - chr2_3:50771234-50771253 Msa0297120:intron 45.0%
ATCCAACGGAAGACTTGAAC+AGG + chr2_3:50771272-50771291 None:intergenic 45.0%
TAAAGTGGTCCAAATGGTCC+TGG - chr2_3:50771300-50771319 Msa0297120:intron 45.0%
AAAGTGGTCCAAATGGTCCT+GGG - chr2_3:50771301-50771320 Msa0297120:intron 45.0%
TGAAATCACCCAGGACCATT+TGG + chr2_3:50771312-50771331 None:intergenic 45.0%
TCTGCATAGTGAAATCACCC+AGG + chr2_3:50771321-50771340 None:intergenic 45.0%
GTCTCTTTCAACTCCATGCA+TGG + chr2_3:50771511-50771530 None:intergenic 45.0%
! AGGTTGCTGCTGTTTGAAGT+TGG + chr2_3:50771543-50771562 None:intergenic 45.0%
TTACCACAGTAGTTCAACCC+AGG - chr2_3:50771575-50771594 Msa0297120:intron 45.0%
! ATACCTGGGTTGAACTACTG+TGG + chr2_3:50771581-50771600 None:intergenic 45.0%
CAAATGCTGCTGCGCTATAT+CGG + chr2_3:50771633-50771652 None:intergenic 45.0%
AGATGTAGAATAGGCGCACA+CGG + chr2_3:50771951-50771970 None:intergenic 45.0%
CATTCTGCATTCAGACTGTC+TGG - chr2_3:50772105-50772124 Msa0297120:CDS 45.0%
ATTCCGGACTCTATGAACGA+GGG + chr2_3:50772147-50772166 None:intergenic 45.0%
GTTCATAGAGTCCGGAATGT+GGG - chr2_3:50772149-50772168 Msa0297120:CDS 45.0%
TTCATAGAGTCCGGAATGTG+GGG - chr2_3:50772150-50772169 Msa0297120:CDS 45.0%
!! CATACAAAAGAGTGCTCGAG+GGG - chr2_3:50772255-50772274 Msa0297120:CDS 45.0%
!! ATACAAAAGAGTGCTCGAGG+GGG - chr2_3:50772256-50772275 Msa0297120:CDS 45.0%
GAATACTCTTGGGGGTTTGA+AGG - chr2_3:50772304-50772323 Msa0297120:intron 45.0%
AAAATATGGGGAAGGCCTTG+TGG - chr2_3:50772345-50772364 Msa0297120:intron 45.0%
GGAGGAGGATGATAAGAACA+AGG - chr2_3:50772709-50772728 Msa0297120:intron 45.0%
! AAGCTTTATCGCACTAGGTG+AGG + chr2_3:50773450-50773469 None:intergenic 45.0%
TGACTGTTTGGGAGAGCTTA+GGG - chr2_3:50773514-50773533 Msa0297120:intron 45.0%
TTGGGAGAGCTTAGGGATAT+TGG - chr2_3:50773521-50773540 Msa0297120:intron 45.0%
AGTGTCTGTGCTGGACTAAT+TGG + chr2_3:50773842-50773861 None:intergenic 45.0%
ATTAGTCCAGCACAGACACT+CGG - chr2_3:50773842-50773861 Msa0297120:intron 45.0%
CAGTGCATGGAACAATTGAC+GGG - chr2_3:50773870-50773889 Msa0297120:CDS 45.0%
GCATCTAAGGGTTCTTCGAT+TGG - chr2_3:50773974-50773993 Msa0297120:intron 45.0%
TCTAAGGGTTCTTCGATTGG+AGG - chr2_3:50773977-50773996 Msa0297120:intron 45.0%
CGACCGAAATCAAATAGGAG+TGG - chr2_3:50774054-50774073 Msa0297120:intron 45.0%
!! TCAATGTTCCGGGTTTTTGG+GGG - chr2_3:50774122-50774141 Msa0297120:CDS 45.0%
TGTTTAACCCCCCAAAAACC+CGG + chr2_3:50774133-50774152 None:intergenic 45.0%
CTTAACTCCCAAACAAGGGA+AGG - chr2_3:50774491-50774510 Msa0297120:five_prime_UTR 45.0%
! GGAAAACCCTTCCCTTGTTT+GGG + chr2_3:50774501-50774520 None:intergenic 45.0%
AGGAAAGGAAAGGCTAAGGT+GGG + chr2_3:50774559-50774578 None:intergenic 45.0%
AAGGAAAGGAAAGGCTAAGG+TGG + chr2_3:50774560-50774579 None:intergenic 45.0%
TTTGAGGGGAAGGAAAGGAA+AGG + chr2_3:50774569-50774588 None:intergenic 45.0%
!!! GGCTTTGTTTGCGAGTTTTG+AGG + chr2_3:50774585-50774604 None:intergenic 45.0%
GTTTAACGATGATGAAGGGG+AGG - chr2_3:50774627-50774646 Msa0297120:intron 45.0%
ATGAAGGGGAGGTAAAGGAA+AGG - chr2_3:50774638-50774657 Msa0297120:intron 45.0%
GTTTCGCAAATGACAGGCTA+AGG + chr2_3:50774991-50775010 None:intergenic 45.0%
AAGGCAGTTTCGCAAATGAC+AGG + chr2_3:50774997-50775016 None:intergenic 45.0%
GAAACTGCCTTGATGTTCCT+TGG - chr2_3:50775006-50775025 Msa0297120:intron 45.0%
! GGCTTTTCCAAGGAACATCA+AGG + chr2_3:50775016-50775035 None:intergenic 45.0%
!!! TCCCACTTTTGGCTTTTCCA+AGG + chr2_3:50775026-50775045 None:intergenic 45.0%
ATGTAGTTGACCCTAAAGGC+TGG + chr2_3:50776096-50776115 None:intergenic 45.0%
GGGAAAACCTGTAGATTCTG+TGG + chr2_3:50776267-50776286 None:intergenic 45.0%
GAGTTGAGGTAACACCTATC+TGG + chr2_3:50776304-50776323 None:intergenic 45.0%
!!! ATTTCATAATTATTATTTTT+AGG + chr2_3:50774248-50774267 None:intergenic 5.0%
!! AATAATAATTATGAAATAAA+AGG - chr2_3:50774251-50774270 Msa0297120:five_prime_UTR 5.0%
TCTCTCTCCTCCATCTCTCT+CGG - chr2_3:50768645-50768664 Msa0297120:intron 50.0%
GGAGCAAAGGGATAGCAGTA+AGG - chr2_3:50768912-50768931 Msa0297120:three_prime_UTR 50.0%
TGAGTACACGCATGGTTCAG+AGG - chr2_3:50769033-50769052 Msa0297120:three_prime_UTR 50.0%
TGACGCAGGGGTTGAGATAA+TGG - chr2_3:50769447-50769466 Msa0297120:intron 50.0%
CTCTTCGTTGTAGCAAACGG+AGG + chr2_3:50769795-50769814 None:intergenic 50.0%
TAGGCAATCTCAGGGAACCT+AGG + chr2_3:50770247-50770266 None:intergenic 50.0%
CTAGGCTGTAGGCAATCTCA+GGG + chr2_3:50770255-50770274 None:intergenic 50.0%
GATTGCCTACAGCCTAGGAT+AGG - chr2_3:50770258-50770277 Msa0297120:intron 50.0%
TTCCACCTATCCTAGGCTGT+AGG + chr2_3:50770266-50770285 None:intergenic 50.0%
TGTCGAGTTCCACCTATCCT+AGG + chr2_3:50770273-50770292 None:intergenic 50.0%
GAGGTTTCCTGTCAAGCTGA+AGG - chr2_3:50770767-50770786 Msa0297120:intron 50.0%
TGATGTGTAGGCGCGTAAAC+CGG - chr2_3:50770962-50770981 Msa0297120:CDS 50.0%
TGGGAGTTGTAAGGGGAATC+AGG - chr2_3:50771037-50771056 Msa0297120:CDS 50.0%
CAGGCAAGTAAATGGAGGGA+TGG - chr2_3:50771056-50771075 Msa0297120:CDS 50.0%
GCATTCATGACATCCCGAAG+GGG + chr2_3:50771250-50771269 None:intergenic 50.0%
GGCATTCATGACATCCCGAA+GGG + chr2_3:50771251-50771270 None:intergenic 50.0%
AGGCATTCATGACATCCCGA+AGG + chr2_3:50771252-50771271 None:intergenic 50.0%
TGCCTGTTCAAGTCTTCCGT+TGG - chr2_3:50771267-50771286 Msa0297120:intron 50.0%
AGCGCACTGCAGCATAAAAG+TGG + chr2_3:50771662-50771681 None:intergenic 50.0%
CTGCTTGTGTCTGGGAACTT+TGG - chr2_3:50771969-50771988 Msa0297120:CDS 50.0%
ATGACTTCCTCCTCGAGCAA+GGG + chr2_3:50772015-50772034 None:intergenic 50.0%
AATGACTTCCTCCTCGAGCA+AGG + chr2_3:50772016-50772035 None:intergenic 50.0%
GACTCTATGAACGAGGGATC+TGG + chr2_3:50772141-50772160 None:intergenic 50.0%
GATCCCTCGTTCATAGAGTC+CGG - chr2_3:50772141-50772160 Msa0297120:CDS 50.0%
CATTCCGGACTCTATGAACG+AGG + chr2_3:50772148-50772167 None:intergenic 50.0%
CGTTCATAGAGTCCGGAATG+TGG - chr2_3:50772148-50772167 Msa0297120:CDS 50.0%
CCTTGTGGAACGGCTGTATA+CGG - chr2_3:50772360-50772379 Msa0297120:intron 50.0%
CTTGTGGAACGGCTGTATAC+GGG - chr2_3:50772361-50772380 Msa0297120:intron 50.0%
! AGCGCGTCCTCTTCTTTTCT+TGG + chr2_3:50772903-50772922 None:intergenic 50.0%
AAAAGAAGAGGACGCGCTCT+TGG - chr2_3:50772905-50772924 Msa0297120:intron 50.0%
GTGACTGTTTGGGAGAGCTT+AGG - chr2_3:50773513-50773532 Msa0297120:intron 50.0%
ACACTCGGTTCTTCAGTGCA+TGG - chr2_3:50773857-50773876 Msa0297120:CDS 50.0%
CTTTCAGCTGTTCAGAACCC+AGG + chr2_3:50773928-50773947 None:intergenic 50.0%
!! CTGGGTTCTGAACAGCTGAA+AGG - chr2_3:50773926-50773945 Msa0297120:CDS 50.0%
!! CAATGTTCCGGGTTTTTGGG+GGG - chr2_3:50774123-50774142 Msa0297120:CDS 50.0%
GGGAAAACCCTTCCCTTGTT+TGG + chr2_3:50774502-50774521 None:intergenic 50.0%
GAAAGGAAAGGCTAAGGTGG+GGG + chr2_3:50774557-50774576 None:intergenic 50.0%
GGAAAGGAAAGGCTAAGGTG+GGG + chr2_3:50774558-50774577 None:intergenic 50.0%
GGGAAGGAAAGGAAAGGCTA+AGG + chr2_3:50774563-50774582 None:intergenic 50.0%
!!! CGAGTTTTGAGGGGAAGGAA+AGG + chr2_3:50774574-50774593 None:intergenic 50.0%
!!! GTTTGCGAGTTTTGAGGGGA+AGG + chr2_3:50774579-50774598 None:intergenic 50.0%
CGATGATGAAGGGGAGGTAA+AGG - chr2_3:50774633-50774652 Msa0297120:intron 50.0%
! GCATTTGAGATTGCTCCCAC+AGG - chr2_3:50775184-50775203 Msa0297120:intron 50.0%
TTCTCATGGGGCTGAACCAT+TGG + chr2_3:50775830-50775849 None:intergenic 50.0%
GAAGATTAGGATGGGGAGGG+AGG + chr2_3:50768674-50768693 None:intergenic 55.0%
AAAGAGGGAAAGAGGGGGGT+CGG + chr2_3:50768808-50768827 None:intergenic 55.0%
!!! TTTACGCGGGGTTTTGGGAC+AGG - chr2_3:50769321-50769340 Msa0297120:intron 55.0%
!!! TTACGCGGGGTTTTGGGACA+GGG - chr2_3:50769322-50769341 Msa0297120:intron 55.0%
CTGAGCGATCGGGGATAACT+AGG + chr2_3:50770165-50770184 None:intergenic 55.0%
CCTAGGCTGTAGGCAATCTC+AGG + chr2_3:50770256-50770275 None:intergenic 55.0%
CCTGAGATTGCCTACAGCCT+AGG - chr2_3:50770253-50770272 Msa0297120:intron 55.0%
TGCCTACAGCCTAGGATAGG+TGG - chr2_3:50770261-50770280 Msa0297120:intron 55.0%
GATGTGTAGGCGCGTAAACC+GGG - chr2_3:50770963-50770982 Msa0297120:CDS 55.0%
AGCAAGGGCTTGAGCAGCAA+CGG + chr2_3:50772000-50772019 None:intergenic 55.0%
CATGTCCAGACCCCACATTC+CGG + chr2_3:50772163-50772182 None:intergenic 55.0%
! ATGGGGAAGGCCTTGTGGAA+CGG - chr2_3:50772350-50772369 Msa0297120:intron 55.0%
CCGTATACAGCCGTTCCACA+AGG + chr2_3:50772363-50772382 None:intergenic 55.0%
AGAGGACGCGCTCTTGGTTT+CGG - chr2_3:50772911-50772930 Msa0297120:intron 55.0%
GAAGAACCGAGTGTCTGTGC+TGG + chr2_3:50773851-50773870 None:intergenic 55.0%
GAAAGGCTAAGGTGGGGGAA+GGG + chr2_3:50774552-50774571 None:intergenic 55.0%
ACTATTGCGCTGCTGCGTAG+CGG - chr2_3:50774873-50774892 Msa0297120:intron 55.0%
TAGGCAACAGGGTTGCCGAT+CGG + chr2_3:50774930-50774949 None:intergenic 55.0%
GAGGTTGCCGAGAGAGATGG+AGG + chr2_3:50768655-50768674 None:intergenic 60.0%
AGGGAGGTTGCCGAGAGAGA+TGG + chr2_3:50768658-50768677 None:intergenic 60.0%
GGCGCGTAAACCGGGAGAAA+AGG - chr2_3:50770971-50770990 Msa0297120:CDS 60.0%
AGAGTCCGGAATGTGGGGTC+TGG - chr2_3:50772155-50772174 Msa0297120:CDS 60.0%
GGGTCTGGACATGCCAGAAC+AGG - chr2_3:50772170-50772189 Msa0297120:CDS 60.0%
GCTAAGGTGGGGGAAGGGAA+GGG + chr2_3:50774547-50774566 None:intergenic 60.0%
GGAAAGGCTAAGGTGGGGGA+AGG + chr2_3:50774553-50774572 None:intergenic 60.0%
GGAAAGAGGGGGGTCGGTGT+TGG + chr2_3:50768802-50768821 None:intergenic 65.0%
GCTGCTCAAGCCCTTGCTCG+AGG - chr2_3:50772002-50772021 Msa0297120:CDS 65.0%
GCTCAAGCCCTTGCTCGAGG+AGG - chr2_3:50772005-50772024 Msa0297120:CDS 65.0%
AGGGAAGGGAGGGGAGAGGA+GGG + chr2_3:50774533-50774552 None:intergenic 65.0%
AAGGGAAGGGAGGGGAGAGG+AGG + chr2_3:50774534-50774553 None:intergenic 65.0%
AGGTGGGGGAAGGGAAGGGA+GGG + chr2_3:50774543-50774562 None:intergenic 65.0%
AAGGTGGGGGAAGGGAAGGG+AGG + chr2_3:50774544-50774563 None:intergenic 65.0%
GGCTAAGGTGGGGGAAGGGA+AGG + chr2_3:50774548-50774567 None:intergenic 65.0%
GGGAGAGGAGGGGGGAAGGA+GGG + chr2_3:50774522-50774541 None:intergenic 70.0%
GAAGGGAGGGGAGAGGAGGG+GGG + chr2_3:50774530-50774549 None:intergenic 70.0%
GGAAGGGAGGGGAGAGGAGG+GGG + chr2_3:50774531-50774550 None:intergenic 70.0%
GGGAAGGGAGGGGAGAGGAG+GGG + chr2_3:50774532-50774551 None:intergenic 70.0%
GGGAAGGGAAGGGAGGGGAG+AGG + chr2_3:50774537-50774556 None:intergenic 70.0%
GGTGGGGGAAGGGAAGGGAG+GGG + chr2_3:50774542-50774561 None:intergenic 70.0%
GGGGAGAGGAGGGGGGAAGG+AGG + chr2_3:50774523-50774542 None:intergenic 75.0%
GGAGGGGAGAGGAGGGGGGA+AGG + chr2_3:50774526-50774545 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 50768614 50776336 50768614 ID=Msa0297120;Name=Msa0297120
chr2_3 mRNA 50768614 50776336 50768614 ID=Msa0297120-mRNA-1;Parent=Msa0297120;Name=Msa0297120-mRNA-1;_AED=0.21;_eAED=0.21;_QI=1117|0.66|0.6|1|0.55|0.5|10|287|342
chr2_3 exon 50768614 50768641 50768614 ID=Msa0297120-mRNA-1:exon:15966;Parent=Msa0297120-mRNA-1
chr2_3 exon 50768900 50769187 50768900 ID=Msa0297120-mRNA-1:exon:15965;Parent=Msa0297120-mRNA-1
chr2_3 exon 50770952 50771098 50770952 ID=Msa0297120-mRNA-1:exon:15964;Parent=Msa0297120-mRNA-1
chr2_3 exon 50771943 50772282 50771943 ID=Msa0297120-mRNA-1:exon:15963;Parent=Msa0297120-mRNA-1
chr2_3 exon 50773452 50773489 50773452 ID=Msa0297120-mRNA-1:exon:15962;Parent=Msa0297120-mRNA-1
chr2_3 exon 50773583 50773787 50773583 ID=Msa0297120-mRNA-1:exon:15961;Parent=Msa0297120-mRNA-1
chr2_3 exon 50773853 50773978 50773853 ID=Msa0297120-mRNA-1:exon:15960;Parent=Msa0297120-mRNA-1
chr2_3 exon 50774102 50774622 50774102 ID=Msa0297120-mRNA-1:exon:15959;Parent=Msa0297120-mRNA-1
chr2_3 exon 50775429 50775607 50775429 ID=Msa0297120-mRNA-1:exon:15958;Parent=Msa0297120-mRNA-1
chr2_3 exon 50775776 50776336 50775776 ID=Msa0297120-mRNA-1:exon:15957;Parent=Msa0297120-mRNA-1
chr2_3 five_prime_UTR 50775776 50776336 50775776 ID=Msa0297120-mRNA-1:five_prime_utr;Parent=Msa0297120-mRNA-1
chr2_3 five_prime_UTR 50775429 50775607 50775429 ID=Msa0297120-mRNA-1:five_prime_utr;Parent=Msa0297120-mRNA-1
chr2_3 five_prime_UTR 50774246 50774622 50774246 ID=Msa0297120-mRNA-1:five_prime_utr;Parent=Msa0297120-mRNA-1
chr2_3 CDS 50774102 50774245 50774102 ID=Msa0297120-mRNA-1:cds;Parent=Msa0297120-mRNA-1
chr2_3 CDS 50773853 50773978 50773853 ID=Msa0297120-mRNA-1:cds;Parent=Msa0297120-mRNA-1
chr2_3 CDS 50773583 50773787 50773583 ID=Msa0297120-mRNA-1:cds;Parent=Msa0297120-mRNA-1
chr2_3 CDS 50773452 50773489 50773452 ID=Msa0297120-mRNA-1:cds;Parent=Msa0297120-mRNA-1
chr2_3 CDS 50771943 50772282 50771943 ID=Msa0297120-mRNA-1:cds;Parent=Msa0297120-mRNA-1
chr2_3 CDS 50770952 50771098 50770952 ID=Msa0297120-mRNA-1:cds;Parent=Msa0297120-mRNA-1
chr2_3 CDS 50769159 50769187 50769159 ID=Msa0297120-mRNA-1:cds;Parent=Msa0297120-mRNA-1
chr2_3 three_prime_UTR 50768900 50769158 50768900 ID=Msa0297120-mRNA-1:three_prime_utr;Parent=Msa0297120-mRNA-1
chr2_3 three_prime_UTR 50768614 50768641 50768614 ID=Msa0297120-mRNA-1:three_prime_utr;Parent=Msa0297120-mRNA-1
Gene Sequence

>Msa0297120

ATGCAAATCAAATCCATCTCTCTCTCTTCTTCTGACCAAACAATGAAGAGAGGTTCTGGTAAGAGGTTTCCTGTCAAGCTGAAGGATCTTCTTGCTACTGGGATTCTGGAGAGATTGAAAGTGAGATATGTCAAGGGACAAAAGGCGCGTAAACCGGGAGAAAAGGATTTACAAGGTGTGATCAAAGATTCGGGAATTTTGTGCTTTTGTGGGAGTTGTAAGGGGAATCAGGCAAGTAAATGGAGGGATGGTTATTGTTTTTTTGCTTGTGTTGTCTCGCCGAATGTTTTTGAGTTGCATGCTGGTAGTGCTAATAAACGTCCTCCGGAGTATACTTACCTTGAGAATGGAAAACCCCTTCGGGATGTCATGAATGCCTGTTCAAGTCTTCCGTTGGATACATTGGATAAAGTGGTCCAAATGGTCCTGGGTGATTTCACTATGCAGAATTCTAATATCTGTTTCAATTGCAGAGGGTCAATTTCTGAATCTAACAAGGGTAAGTCAAAACTACATATCAAAATTTATTCTTCTTGTTCTTGTAGCCAAAAAATGGAGGAGGATGATAAGAACAAGGCATCAGGAAAGATGATCAGTTCTACTACTGATCATCATCAGAAAGAGGGTGATGATGTAGCCATGAATGATTCTACATTTTCATTGCAATTGGCTTCTTCTCTCAACAGAACACCCAAGAAGAGAAAAGAAGGACCTGAAGCTAAAACAACTTCTGCAGGAACTTCTTCCAAGAAAAGAAGAGGACGCGCTCTTGGTTTCGGATCAAAAAATAAGAGAGAAGAAGGACCTTCTGAAAAAACTACTTCTGCAGAAACTTCTTCCAAGAATATTAGAGCACAGACACTCGGTTCTTCAGTGCATGGAACAATTGACGGGAAATTTGATGACGGATATATAGTCACAGTGGACCTGGGTTCTGAACAGCTGAAAGGTGTCTTGTATCATGTTTCAAGTAATGCATCTAAGGGTTCTTCGATTGGAGGTTTATCAGGAGAAAAGGTTGAGAGATAA
Protein sequence

>Msa0297120

MQIKSISLSSSDQTMKRGSGKRFPVKLKDLLATGILERLKVRYVKGQKARKPGEKDLQGVIKDSGILCFCGSCKGNQASKWRDGYCFFACVVSPNVFELHAGSANKRPPEYTYLENGKPLRDVMNACSSLPLDTLDKVVQMVLGDFTMQNSNICFNCRGSISESNKGKSKLHIKIYSSCSCSQKMEEDDKNKASGKMISSTTDHHQKEGDDVAMNDSTFSLQLASSLNRTPKKRKEGPEAKTTSAGTSSKKRRGRALGFGSKNKREEGPSEKTTSAETSSKNIRAQTLGSSVHGTIDGKFDDGYIVTVDLGSEQLKGVLYHVSSNASKGSSIGGLSGEKVER*