AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0306820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0306820 MtrunA17_Chr8g0351041 96.667 60 2 0 1 60 1 60 1.11e-35 120
Msa0306820 MtrunA17_Chr7g0246431 93.333 60 4 0 1 60 1 60 9.60e-35 120
Msa0306820 MtrunA17_Chr8g0351031 95.000 60 3 0 1 60 1 60 2.78e-34 119
Msa0306820 MtrunA17_Chr4g0057151 86.667 60 8 0 1 60 1 60 6.35e-31 110
Msa0306820 MtrunA17_Chr8g0380021 44.853 136 70 1 3 138 19 149 1.49e-27 102
Msa0306820 MtrunA17_Chr3g0077501 49.587 121 56 1 1 121 1 116 2.20e-27 101
Msa0306820 MtrunA17_Chr7g0246381 74.194 62 16 0 1 62 1 62 7.40e-27 95.5
Msa0306820 MtrunA17_Chr6g0455511 69.565 69 21 0 1 69 1 69 1.50e-26 99.8
Msa0306820 MtrunA17_Chr3g0097101 71.875 64 18 0 1 64 16 79 1.64e-26 99.8
Msa0306820 MtrunA17_Chr5g0420091 52.128 94 39 1 1 88 1 94 2.11e-26 98.6
Msa0306820 MtrunA17_Chr2g0284911 77.586 58 13 0 3 60 18 75 2.98e-26 99.4
Msa0306820 MtrunA17_Chr7g0220111 66.667 69 23 0 1 69 1 69 3.10e-26 99.0
Msa0306820 MtrunA17_Chr8g0377561 74.138 58 15 0 1 58 1 58 3.78e-26 94.7
Msa0306820 MtrunA17_Chr4g0061671 71.667 60 17 0 1 60 1 60 4.56e-26 97.1
Msa0306820 MtrunA17_Chr3g0122251 68.116 69 22 0 1 69 1 69 5.02e-26 98.6
Msa0306820 MtrunA17_Chr2g0308251 74.576 59 15 0 1 59 1 59 8.43e-26 93.6
Msa0306820 MtrunA17_Chr8g0351051 76.271 59 14 0 1 59 1 59 2.00e-25 97.1
Msa0306820 MtrunA17_Chr1g0173161 70.492 61 18 0 1 61 1 61 1.04e-24 90.5
Msa0306820 MtrunA17_Chr5g0427921 67.213 61 20 0 1 61 1 61 1.08e-24 89.7
Msa0306820 MtrunA17_Chr4g0020221 75.000 60 15 0 1 60 1 60 1.84e-24 94.7
Msa0306820 MtrunA17_Chr8g0366231 71.667 60 17 0 1 60 1 60 2.00e-24 94.0
Msa0306820 MtrunA17_Chr4g0061691 71.667 60 17 0 1 60 1 60 6.05e-24 92.8
Msa0306820 MtrunA17_Chr6g0474371 70.000 60 18 0 1 60 1 60 7.15e-24 91.7
Msa0306820 MtrunA17_Chr2g0279821 67.188 64 21 0 1 64 1 64 3.07e-23 90.9
Msa0306820 MtrunA17_Chr4g0018421 67.797 59 19 0 1 59 1 59 6.26e-23 89.4
Msa0306820 MtrunA17_Chr1g0204111 70.000 60 18 0 1 60 17 76 6.84e-23 90.5
Msa0306820 MtrunA17_Chr5g0427401 66.667 60 20 0 1 60 1 60 1.47e-22 89.0
Msa0306820 MtrunA17_Chr5g0412271 67.797 59 19 0 1 59 1 59 1.71e-22 89.0
Msa0306820 MtrunA17_Chr5g0412461 67.797 59 19 0 1 59 1 59 2.85e-22 88.2
Msa0306820 MtrunA17_Chr7g0220121 67.742 62 20 0 1 62 1 62 3.08e-22 88.6
Msa0306820 MtrunA17_Chr4g0049541 41.176 136 55 3 1 128 1 119 9.42e-22 86.7
Msa0306820 MtrunA17_Chr5g0420081 65.000 60 21 0 1 60 1 60 1.66e-21 86.3
Msa0306820 MtrunA17_Chr3g0142191 66.102 59 20 0 1 59 1 59 1.78e-21 86.3
Msa0306820 MtrunA17_Chr5g0411691 60.938 64 25 0 1 64 1 64 2.30e-21 86.3
Msa0306820 MtrunA17_Chr5g0425191 62.295 61 23 0 1 61 1 61 7.61e-21 81.3
Msa0306820 MtrunA17_Chr4g0049901 65.000 60 21 0 1 60 27 86 1.37e-20 84.0
Msa0306820 MtrunA17_Chr4g0044071 59.016 61 25 0 1 61 1 61 2.33e-20 80.5
Msa0306820 MtrunA17_Chr1g0159661 57.627 59 25 0 1 59 1 59 2.44e-20 82.0
Msa0306820 MtrunA17_Chr3g0125241 59.322 59 24 0 1 59 26 84 5.46e-20 81.6
Msa0306820 MtrunA17_Chr1g0164791 58.730 63 26 0 1 63 1 63 6.32e-20 82.0
Msa0306820 MtrunA17_Chr3g0134451 59.155 71 29 0 1 71 1 71 9.78e-20 83.2
Msa0306820 MtrunA17_Chr1g0166611 69.811 53 16 0 13 65 17 69 9.89e-19 76.6
Msa0306820 MtrunA17_Chr5g0404951 59.322 59 24 0 1 59 1 59 1.06e-18 79.0
Msa0306820 MtrunA17_Chr2g0292791 50.000 82 37 2 3 84 10 87 2.90e-16 72.4
Msa0306820 MtrunA17_Chr1g0175611 56.140 57 25 0 1 57 1 57 1.07e-15 69.7
Msa0306820 MtrunA17_Chr8g0379021 56.364 55 24 0 3 57 13 67 1.82e-15 69.3
Msa0306820 MtrunA17_Chr3g0089141 58.182 55 23 0 3 57 10 64 1.98e-15 70.1
Msa0306820 MtrunA17_Chr1g0208561 58.182 55 23 0 3 57 10 64 2.08e-15 70.1
Msa0306820 MtrunA17_Chr1g0175601 56.140 57 25 0 1 57 1 57 2.87e-15 68.9
Msa0306820 MtrunA17_Chr3g0099421 40.870 115 58 3 3 117 35 139 3.95e-15 69.7
Msa0306820 MtrunA17_Chr1g0206701 41.026 117 55 4 3 117 10 114 4.08e-15 69.3
Msa0306820 MtrunA17_Chr1g0180591 54.386 57 26 0 1 57 1 57 4.21e-15 68.6
Msa0306820 MtrunA17_Chr3g0099411 47.561 82 39 2 3 84 10 87 4.55e-15 68.9
Msa0306820 MtrunA17_Chr1g0208581 56.364 55 24 0 3 57 10 64 6.19e-15 68.9
Msa0306820 MtrunA17_Chr8g0376821 56.140 57 25 0 1 57 1 57 8.32e-15 67.8
Msa0306820 MtrunA17_Chr1g0206721 40.171 117 56 4 3 117 10 114 8.95e-15 68.6
Msa0306820 MtrunA17_Chr8g0355091 47.561 82 39 2 3 84 10 87 1.27e-14 68.2
Msa0306820 MtrunA17_Chr1g0149391 58.182 55 23 0 3 57 10 64 1.50e-14 68.2
Msa0306820 MtrunA17_Chr5g0422421 60.000 55 22 0 3 57 10 64 1.75e-14 67.8
Msa0306820 MtrunA17_Chr1g0169761 56.140 57 25 0 1 57 1 57 1.79e-14 66.6
Msa0306820 MtrunA17_Chr1g0187361 58.182 55 23 0 3 57 10 64 2.00e-14 67.8
Msa0306820 MtrunA17_Chr4g0018951 68.182 44 14 0 14 57 24 67 2.10e-14 66.2
Msa0306820 MtrunA17_Chr1g0188671 58.182 55 23 0 3 57 48 102 2.33e-14 67.8
Msa0306820 MtrunA17_Chr2g0333981 54.386 57 26 0 1 57 11 67 2.89e-14 66.2
Msa0306820 MtrunA17_Chr2g0317481 55.357 56 25 0 3 58 10 65 4.85e-14 66.6
Msa0306820 MtrunA17_Chr2g0317451 55.357 56 25 0 3 58 10 65 4.90e-14 66.6
Msa0306820 MtrunA17_Chr4g0052081 50.847 59 29 0 1 59 1 59 5.18e-14 65.5
Msa0306820 MtrunA17_Chr5g0419601 58.182 55 23 0 3 57 10 64 5.32e-14 66.6
Msa0306820 MtrunA17_Chr2g0325971 56.364 55 24 0 3 57 10 64 6.15e-14 66.2
Msa0306820 MtrunA17_Chr5g0417661 51.923 52 25 0 1 52 56 107 6.82e-14 63.9
Msa0306820 MtrunA17_Chr2g0300421 54.545 55 25 0 3 57 10 64 1.16e-13 64.7
Msa0306820 MtrunA17_Chr1g0206991 54.545 55 25 0 3 57 10 64 1.32e-13 64.7
Msa0306820 MtrunA17_Chr4g0074101 52.632 57 27 0 1 57 1 57 1.33e-13 64.7
Msa0306820 MtrunA17_Chr8g0357771 54.386 57 26 0 1 57 1 57 1.38e-13 64.3
Msa0306820 MtrunA17_Chr4g0060841 53.846 52 24 0 1 52 1 52 2.46e-13 65.5
Msa0306820 MtrunA17_Chr4g0052061 49.153 59 30 0 1 59 1 59 3.64e-13 62.8
Msa0306820 MtrunA17_Chr5g0422941 54.545 55 25 0 3 57 10 64 4.50e-13 63.9
Msa0306820 MtrunA17_Chr3g0111841 56.000 50 22 0 8 57 2 51 4.64e-13 60.5
Msa0306820 MtrunA17_Chr3g0089151 44.737 76 39 2 3 78 10 82 1.09e-12 60.8
Msa0306820 MtrunA17_Chr3g0085241 43.373 83 43 2 3 85 42 120 5.48e-12 61.2
Msa0306820 MtrunA17_Chr3g0119901 46.774 62 33 0 3 64 10 71 1.32e-11 59.7
Msa0306820 MtrunA17_Chr2g0300441 49.091 55 28 0 5 59 12 66 3.47e-11 58.9
Msa0306820 MtrunA17_Chr8g0356071 47.368 57 30 0 1 57 1 57 3.72e-11 57.8
Msa0306820 MtrunA17_Chr1g0206691 57.447 47 20 0 11 57 1 47 4.83e-11 58.2
Msa0306820 MtrunA17_Chr4g0071601 60.465 43 17 0 15 57 25 67 5.31e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0306820 AT2G45660.2 91.667 60 5 0 1 60 1 60 1.24e-34 118
Msa0306820 AT4G11880.2 78.378 74 16 0 1 74 1 74 1.50e-34 119
Msa0306820 AT4G11880.3 78.378 74 16 0 1 74 1 74 1.50e-34 119
Msa0306820 AT4G11880.4 78.378 74 16 0 1 74 1 74 5.07e-34 119
Msa0306820 AT4G11880.1 78.378 74 16 0 1 74 1 74 5.07e-34 119
Msa0306820 AT2G45660.1 91.667 60 5 0 1 60 1 60 9.55e-34 117
Msa0306820 AT4G22950.2 88.333 60 7 0 1 60 1 60 2.27e-33 115
Msa0306820 AT4G22950.3 88.333 60 7 0 1 60 1 60 3.07e-32 114
Msa0306820 AT4G22950.1 88.333 60 7 0 1 60 1 60 3.07e-32 114
Msa0306820 AT5G62165.6 80.000 60 12 0 1 60 1 60 3.03e-30 107
Msa0306820 AT5G62165.9 80.000 60 12 0 1 60 1 60 3.03e-30 107
Msa0306820 AT5G62165.7 80.000 60 12 0 1 60 1 60 3.03e-30 107
Msa0306820 AT5G62165.8 80.000 60 12 0 1 60 1 60 3.03e-30 107
Msa0306820 AT5G62165.13 80.000 60 12 0 1 60 1 60 3.03e-30 107
Msa0306820 AT5G62165.14 80.000 60 12 0 1 60 1 60 3.08e-30 105
Msa0306820 AT5G62165.17 80.000 60 12 0 1 60 1 60 3.77e-30 107
Msa0306820 AT5G62165.12 80.000 60 12 0 1 60 1 60 3.77e-30 107
Msa0306820 AT5G62165.11 80.000 60 12 0 1 60 1 60 3.77e-30 107
Msa0306820 AT5G62165.10 80.000 60 12 0 1 60 1 60 2.19e-29 106
Msa0306820 AT5G62165.4 80.000 60 12 0 1 60 1 60 2.19e-29 106
Msa0306820 AT5G62165.3 80.000 60 12 0 1 60 1 60 2.86e-29 106
Msa0306820 AT5G62165.1 80.000 60 12 0 1 60 1 60 2.86e-29 106
Msa0306820 AT5G62165.2 80.000 60 12 0 1 60 1 60 2.86e-29 106
Msa0306820 AT4G09960.2 50.413 121 55 1 1 121 1 116 3.13e-29 106
Msa0306820 AT4G09960.6 50.413 121 55 1 1 121 2 117 3.78e-29 106
Msa0306820 AT4G09960.1 50.413 121 55 1 1 121 1 116 3.85e-29 106
Msa0306820 AT4G09960.5 50.413 121 55 1 1 121 11 126 6.24e-29 106
Msa0306820 AT4G09960.3 50.413 121 55 1 1 121 27 142 1.15e-28 105
Msa0306820 AT4G09960.4 50.413 121 55 1 1 121 96 211 9.43e-28 105
Msa0306820 AT3G58780.2 57.317 82 30 1 3 84 18 94 5.99e-27 100
Msa0306820 AT5G15800.1 68.116 69 22 0 1 69 1 69 1.00e-26 100
Msa0306820 AT5G51860.2 73.438 64 17 0 1 64 1 64 1.53e-26 99.0
Msa0306820 AT5G15800.2 68.116 69 22 0 1 69 1 69 1.61e-26 100
Msa0306820 AT1G24260.3 69.565 69 21 0 1 69 1 69 1.62e-26 99.8
Msa0306820 AT5G51860.1 73.438 64 17 0 1 64 1 64 1.77e-26 99.0
Msa0306820 AT1G24260.1 69.565 69 21 0 1 69 1 69 2.33e-26 99.8
Msa0306820 AT1G24260.2 69.565 69 21 0 1 69 1 69 2.45e-26 99.8
Msa0306820 AT2G03710.3 73.333 60 16 0 1 60 1 60 2.61e-26 98.2
Msa0306820 AT2G42830.2 72.131 61 17 0 3 63 18 78 6.76e-26 98.6
Msa0306820 AT2G42830.1 72.131 61 17 0 3 63 18 78 6.92e-26 98.6
Msa0306820 AT2G45650.1 77.966 59 13 0 1 59 1 59 9.55e-26 98.2
Msa0306820 AT5G51870.2 73.770 61 16 0 1 61 1 61 1.18e-25 95.9
Msa0306820 AT3G58780.1 72.131 61 17 0 3 63 18 78 1.21e-25 97.8
Msa0306820 AT3G58780.5 72.131 61 17 0 3 63 24 84 1.24e-25 97.8
Msa0306820 AT2G03710.1 72.581 62 17 0 1 62 1 62 1.66e-25 97.8
Msa0306820 AT2G03710.2 72.581 62 17 0 1 62 1 62 1.73e-25 97.8
Msa0306820 AT4G18960.1 75.862 58 14 0 3 60 19 76 2.07e-25 97.4
Msa0306820 AT3G58780.4 72.131 61 17 0 3 63 18 78 2.15e-25 97.8
Msa0306820 AT3G02310.2 73.333 60 16 0 1 60 1 60 2.19e-25 95.9
Msa0306820 AT3G58780.3 74.138 58 15 0 3 60 18 75 2.62e-25 97.4
Msa0306820 AT3G02310.1 65.217 69 24 0 1 69 1 69 2.99e-25 97.1
Msa0306820 AT5G51870.1 73.770 61 16 0 1 61 1 61 3.15e-25 95.9
Msa0306820 AT5G51870.5 73.770 61 16 0 1 61 24 84 3.23e-25 95.5
Msa0306820 AT5G51870.4 73.770 61 16 0 1 61 1 61 8.68e-25 95.1
Msa0306820 AT5G51870.3 73.770 61 16 0 1 61 11 71 9.04e-25 95.1
Msa0306820 AT5G13790.2 76.667 60 14 0 1 60 1 60 2.27e-24 95.1
Msa0306820 AT5G13790.1 76.667 60 14 0 1 60 1 60 2.30e-24 95.1
Msa0306820 AT5G60910.1 65.217 69 24 0 1 69 1 69 3.37e-24 94.0
Msa0306820 AT3G30260.1 65.217 69 24 0 1 69 1 69 3.66e-24 94.0
Msa0306820 AT3G61120.1 72.881 59 16 0 1 59 1 59 5.65e-24 93.6
Msa0306820 AT1G69120.2 68.333 60 19 0 1 60 1 60 1.15e-23 92.4
Msa0306820 AT3G57230.2 67.188 64 21 0 1 64 1 64 1.75e-23 89.7
Msa0306820 AT1G69120.1 68.333 60 19 0 1 60 1 60 2.49e-23 92.0
Msa0306820 AT1G71692.1 67.797 59 19 0 1 59 1 59 3.84e-23 90.5
Msa0306820 AT3G57230.1 67.188 64 21 0 1 64 1 64 4.27e-23 90.9
Msa0306820 AT3G57230.4 67.188 64 21 0 1 64 1 64 4.27e-23 90.9
Msa0306820 AT2G14210.1 69.355 62 19 0 1 62 1 62 5.07e-23 90.9
Msa0306820 AT2G14210.2 69.355 62 19 0 1 62 1 62 5.11e-23 90.9
Msa0306820 AT2G22540.3 70.000 60 18 0 1 60 1 60 1.05e-22 90.1
Msa0306820 AT2G22540.1 70.000 60 18 0 1 60 1 60 1.05e-22 90.1
Msa0306820 AT1G26310.1 68.333 60 19 0 1 60 1 60 1.40e-22 90.1
Msa0306820 AT4G24540.1 55.422 83 33 1 1 79 1 83 1.66e-22 89.0
Msa0306820 AT4G37940.4 65.625 64 22 0 1 64 1 64 2.14e-22 88.6
Msa0306820 AT4G37940.3 65.625 64 22 0 1 64 1 64 2.20e-22 87.8
Msa0306820 AT3G57390.3 67.797 59 19 0 1 59 1 59 2.29e-22 89.0
Msa0306820 AT4G37940.1 65.625 64 22 0 1 64 1 64 2.34e-22 89.0
Msa0306820 AT3G57390.1 67.797 59 19 0 1 59 1 59 4.25e-22 88.6
Msa0306820 AT2G22540.2 53.247 77 36 0 1 77 1 77 1.80e-21 86.7
Msa0306820 AT5G23260.3 63.492 63 23 0 1 63 1 63 4.01e-21 85.9
Msa0306820 AT5G23260.2 63.492 63 23 0 1 63 1 63 4.10e-21 85.9
Msa0306820 AT3G54340.1 64.407 59 21 0 1 59 1 59 4.79e-21 85.5
Msa0306820 AT5G23260.4 63.492 63 23 0 1 63 17 79 4.94e-21 86.3
Msa0306820 AT5G23260.1 63.492 63 23 0 1 63 17 79 5.51e-21 85.9
Msa0306820 AT2G22630.1 62.500 64 24 0 1 64 1 64 6.06e-21 85.1
Msa0306820 AT2G22630.2 62.500 64 24 0 1 64 1 64 6.06e-21 85.1
Msa0306820 AT5G10140.2 59.420 69 28 0 1 69 1 69 3.01e-20 82.0
Msa0306820 AT5G10140.4 59.420 69 28 0 1 69 1 69 4.03e-20 82.0
Msa0306820 AT5G10140.1 59.420 69 28 0 1 69 1 69 4.58e-20 82.0
Msa0306820 AT5G10140.3 59.420 69 28 0 1 69 1 69 7.83e-20 81.3
Msa0306820 AT5G20240.2 59.322 59 24 0 1 59 1 59 1.77e-19 79.3
Msa0306820 AT5G20240.1 60.345 58 23 0 1 58 1 58 8.97e-19 79.0
Msa0306820 AT1G22130.1 63.793 58 21 0 1 58 1 58 2.04e-18 80.1
Msa0306820 AT1G77980.1 62.069 58 22 0 1 58 1 58 3.73e-18 79.3
Msa0306820 AT5G65070.4 59.322 59 24 0 1 59 1 59 6.95e-18 75.1
Msa0306820 AT5G65050.1 53.623 69 32 0 1 69 1 69 1.05e-17 75.5
Msa0306820 AT5G65050.2 53.623 69 32 0 1 69 1 69 1.21e-17 75.5
Msa0306820 AT5G65050.5 53.623 69 32 0 1 69 1 69 1.25e-17 75.5
Msa0306820 AT5G65050.3 53.623 69 32 0 1 69 1 69 1.44e-17 75.5
Msa0306820 AT5G65070.1 55.385 65 29 0 1 65 1 65 1.84e-17 75.5
Msa0306820 AT5G65070.5 55.385 65 29 0 1 65 1 65 2.99e-17 75.1
Msa0306820 AT5G65070.2 55.385 65 29 0 1 65 1 65 3.44e-17 75.5
Msa0306820 AT5G65070.3 59.322 59 24 0 1 59 1 59 5.65e-17 74.7
Msa0306820 AT5G65060.2 52.174 69 33 0 1 69 1 69 6.70e-17 73.6
Msa0306820 AT5G65060.1 52.174 69 33 0 1 69 1 69 6.89e-17 73.9
Msa0306820 AT5G65060.3 52.174 69 33 0 1 69 1 69 7.36e-17 73.6
Msa0306820 AT1G31140.1 49.315 73 34 1 1 73 1 70 2.95e-16 72.4
Msa0306820 AT1G77950.3 56.897 58 25 0 1 58 1 58 2.98e-16 73.2
Msa0306820 AT1G77950.2 56.897 58 25 0 1 58 1 58 2.98e-16 73.2
Msa0306820 AT1G77950.1 56.897 58 25 0 1 58 1 58 2.98e-16 73.2
Msa0306820 AT1G77950.4 56.897 58 25 0 1 58 1 58 2.98e-16 73.2
Msa0306820 AT1G31140.2 49.315 73 34 1 1 73 1 70 3.25e-16 72.4
Msa0306820 AT1G01530.1 58.182 55 23 0 3 57 8 62 5.42e-15 69.7
Msa0306820 AT4G37435.1 53.333 60 28 0 1 60 1 60 1.55e-14 67.4
Msa0306820 AT5G65080.3 50.769 65 32 0 1 65 8 72 2.80e-14 67.0
Msa0306820 AT3G66656.1 52.632 57 27 0 1 57 1 57 2.93e-14 66.6
Msa0306820 AT5G60440.1 48.684 76 38 1 3 78 8 82 5.42e-14 67.4
Msa0306820 AT5G65080.2 54.237 59 27 0 1 59 8 66 6.00e-14 66.2
Msa0306820 AT1G18750.4 48.387 62 32 0 1 62 1 62 8.55e-14 67.4
Msa0306820 AT1G18750.1 48.387 62 32 0 1 62 1 62 9.60e-14 67.4
Msa0306820 AT1G18750.3 48.387 62 32 0 1 62 1 62 9.79e-14 67.4
Msa0306820 AT2G34440.1 50.877 57 28 0 1 57 1 57 1.06e-13 65.1
Msa0306820 AT4G36590.1 58.182 55 23 0 3 57 8 62 1.42e-13 65.9
Msa0306820 AT2G03060.3 53.846 52 24 0 1 52 1 52 3.39e-13 65.9
Msa0306820 AT2G03060.7 53.846 52 24 0 1 52 1 52 3.39e-13 65.9
Msa0306820 AT2G03060.1 53.846 52 24 0 1 52 1 52 3.39e-13 65.9
Msa0306820 AT2G03060.2 53.846 52 24 0 1 52 1 52 3.85e-13 65.5
Msa0306820 AT1G72350.1 55.000 60 27 0 3 62 44 103 9.38e-13 63.2
Msa0306820 AT1G69540.1 51.923 52 25 0 1 52 1 52 1.21e-12 63.9
Msa0306820 AT1G69540.2 51.923 52 25 0 1 52 1 52 1.23e-12 63.9
Msa0306820 AT1G77080.11 53.623 69 32 0 1 69 1 69 1.61e-12 62.0
Msa0306820 AT1G77080.4 53.623 69 32 0 1 69 1 69 1.63e-12 62.4
Msa0306820 AT1G77080.5 53.623 69 32 0 1 69 1 69 1.87e-12 61.6
Msa0306820 AT1G65360.1 49.091 55 28 0 3 57 8 62 1.97e-12 62.4
Msa0306820 AT1G77080.8 53.623 69 32 0 1 69 1 69 3.28e-12 62.0
Msa0306820 AT2G24840.1 54.545 55 25 0 3 57 64 118 4.63e-12 62.0
Msa0306820 AT1G77080.12 57.627 59 25 0 1 59 1 59 5.32e-12 60.1
Msa0306820 AT1G77080.2 57.627 59 25 0 1 59 1 59 9.55e-12 60.1
Msa0306820 AT3G04100.1 45.614 57 31 0 3 59 15 71 2.26e-11 59.3

Find 45 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGAAAATGGGTCAATTTC+CGG 0.245887 2_3:-65962376 None:intergenic
CAAAGAAAATATATGTATAA+AGG 0.264770 2_3:-65959479 None:intergenic
TCCATTGTCTTCTCCGATCT+TGG 0.285800 2_3:-65962208 None:intergenic
TCATGATGCCTCCACCAATT+TGG 0.289507 2_3:+65962178 Msa0306820:CDS
CTCGTAAGATCGTACGATCT+TGG 0.325288 2_3:-65962155 None:intergenic
ATCTTGGACCCGCTCCAAAT+TGG 0.331494 2_3:-65962192 None:intergenic
GTGCCTAGAATAGGAAAATA+AGG 0.334290 2_3:-65959453 None:intergenic
GAAACAGATATGCACCAAAT+TGG 0.350438 2_3:-65959508 None:intergenic
CAAAAGTTGCGGGTCGAAAC+CGG 0.380011 2_3:-65962331 None:intergenic
TAGAAAATGAATAAGAGTTA+AGG 0.399824 2_3:-65959420 None:intergenic
AAAGAAAATATATGTATAAA+GGG 0.409393 2_3:-65959478 None:intergenic
TCGTAAGATCGTACGATCTT+GGG 0.412469 2_3:-65962154 None:intergenic
TAAAGGGTTGTGCCTAGAAT+AGG 0.448557 2_3:-65959462 None:intergenic
GCAAGAAAAGCAATTTCAAA+AGG 0.455026 2_3:-65959530 None:intergenic
GGCGCACCGCGGAAGAGCGC+CGG 0.479054 2_3:+65962237 Msa0306820:CDS
CGCAATCCGGCGCTCTTCCG+CGG 0.482947 2_3:-65962243 None:intergenic
CGCGGAAGAGCGCCGGATTG+CGG 0.492698 2_3:+65962244 Msa0306820:CDS
AAAACGCAAATTCCGCAATC+CGG 0.495753 2_3:-65962256 None:intergenic
GTTCCGTGGTCAAAAGTTGC+GGG 0.500654 2_3:-65962341 None:intergenic
TTGGACCCGCTCCAAATTGG+TGG 0.511517 2_3:-65962189 None:intergenic
TTTATGAATTTGCTAGCTCT+AGG 0.521973 2_3:+65960189 Msa0306820:CDS
AATTCATAAAGCGTCCCTCT+TGG 0.530716 2_3:-65960176 None:intergenic
ATAGGAAAATAAGGAAGGGA+AGG 0.533757 2_3:-65959444 None:intergenic
ATTTGGAGCGGGTCCAAGAT+CGG 0.541544 2_3:+65962195 Msa0306820:CDS
ACATTCTCAAAGAGAAGAAG+TGG 0.544843 2_3:+65960086 Msa0306820:CDS
ATCGGAGAAGACAATGGAGC+AGG 0.547157 2_3:+65962213 Msa0306820:CDS
TGCCTCCACCAATTTGGAGC+GGG 0.555647 2_3:+65962184 Msa0306820:CDS
AAAAGTTGCGGGTCGAAACC+GGG 0.556154 2_3:-65962330 None:intergenic
CTAGAATAGGAAAATAAGGA+AGG 0.556487 2_3:-65959449 None:intergenic
ACGGAACTAGTCCGTTCTGC+CGG 0.558362 2_3:+65962357 Msa0306820:CDS
TAGGAAAATAAGGAAGGGAA+GGG 0.573461 2_3:-65959443 None:intergenic
ACACAACACTGATAATTCAA+AGG 0.574104 2_3:-65960123 None:intergenic
GACCCGCTCCAAATTGGTGG+AGG 0.576563 2_3:-65962186 None:intergenic
AGTTCCGTGGTCAAAAGTTG+CGG 0.584275 2_3:-65962342 None:intergenic
ATCAGTGTTGTGTGATGCTG+AGG 0.585355 2_3:+65960133 Msa0306820:CDS
TGGGTCAATTTCCGGCAGAA+CGG 0.603347 2_3:-65962368 None:intergenic
TAGAATAGGAAAATAAGGAA+GGG 0.610409 2_3:-65959448 None:intergenic
TCCAAGATCGGAGAAGACAA+TGG 0.640459 2_3:+65962207 Msa0306820:CDS
GTATAGAGAACGCAACAAGT+AGG 0.642404 2_3:+65960057 Msa0306820:CDS
GGAGAAGACAATGGAGCAGG+TGG 0.645086 2_3:+65962216 Msa0306820:CDS
TACAGTCTGATAATCCGACC+CGG 0.646591 2_3:+65962312 Msa0306820:CDS
GGCAGAACGGACTAGTTCCG+TGG 0.649424 2_3:-65962355 None:intergenic
ATGCCTCCACCAATTTGGAG+CGG 0.658527 2_3:+65962183 Msa0306820:CDS
GTTGCGGGTCGAAACCGGGT+CGG 0.683450 2_3:-65962326 None:intergenic
ATGGAGCAGGTGGCGCACCG+CGG 0.699229 2_3:+65962226 Msa0306820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAATATATGTATAAA+GGG - chr2_3:65959481-65959500 None:intergenic 10.0%
!! AATATTAATCATTTGAAAAA+TGG - chr2_3:65961004-65961023 None:intergenic 10.0%
!! TAATATTTCATAGATATATA+AGG - chr2_3:65961720-65961739 None:intergenic 10.0%
!!! TAAGGATATTTTTATATTTT+GGG + chr2_3:65961836-65961855 Msa0306820:intron 10.0%
!!! GTTTAGTTTTTATTTTTTTA+AGG + chr2_3:65961858-65961877 Msa0306820:intron 10.0%
!! CAAAGAAAATATATGTATAA+AGG - chr2_3:65959482-65959501 None:intergenic 15.0%
!!! TATTTGATGACTAAATTAAA+TGG - chr2_3:65959644-65959663 None:intergenic 15.0%
!!! TTTTTGTTATGAATTGAAAT+AGG + chr2_3:65959904-65959923 Msa0306820:intron 15.0%
!! TGGTATAATTTATTTATCAA+GGG + chr2_3:65960277-65960296 Msa0306820:intron 15.0%
!! ATTAGATCTATTAAAAATCA+AGG - chr2_3:65960610-65960629 None:intergenic 15.0%
!!! TCCTTTTAATATTATAAACA+AGG + chr2_3:65960695-65960714 Msa0306820:intron 15.0%
!!! TTTTTTTTTTTTTTTTGCTG+AGG + chr2_3:65960838-65960857 Msa0306820:intron 15.0%
!!! TATCTTTTGTTTTTGTTTAT+AGG - chr2_3:65961112-65961131 None:intergenic 15.0%
!!! ATGTTGTTAAATTTTGATTT+TGG - chr2_3:65961464-65961483 None:intergenic 15.0%
!! TTAAAATTATCTCTATTTGA+TGG - chr2_3:65961513-65961532 None:intergenic 15.0%
!!! GTAAGGATATTTTTATATTT+TGG + chr2_3:65961835-65961854 Msa0306820:intron 15.0%
!! ACACTATTAATTATTTAATG+TGG - chr2_3:65961991-65962010 None:intergenic 15.0%
!! TAGAAAATGAATAAGAGTTA+AGG - chr2_3:65959423-65959442 None:intergenic 20.0%
!!! CTTTTCTGATTAATTGATAT+AGG - chr2_3:65959568-65959587 None:intergenic 20.0%
!! AAAAGCTCTTAAATCTTTAT+AGG + chr2_3:65959583-65959602 Msa0306820:intron 20.0%
!! AAACAAGAACAACATAAATT+AGG - chr2_3:65959980-65959999 None:intergenic 20.0%
!! AGCAAAGAAAAGAAAAAAAA+TGG + chr2_3:65960010-65960029 Msa0306820:intron 20.0%
!! CTGGTATAATTTATTTATCA+AGG + chr2_3:65960276-65960295 Msa0306820:intron 20.0%
!! GAGATAACATATTTAATAGA+AGG - chr2_3:65960677-65960696 None:intergenic 20.0%
!!! GCCTTGTTTATAATATTAAA+AGG - chr2_3:65960699-65960718 None:intergenic 20.0%
!! ATTATAAACAAGGCTTAAAT+AGG + chr2_3:65960705-65960724 Msa0306820:intron 20.0%
!!! AATATTAGTCATTTGACTTT+TGG + chr2_3:65960803-65960822 Msa0306820:intron 20.0%
!!! TTTTGTTTATAGGCTTAAAT+AGG - chr2_3:65961102-65961121 None:intergenic 20.0%
!!! TTTAAACTCTAAAGTTAATG+TGG + chr2_3:65961192-65961211 Msa0306820:intron 20.0%
!! GAAATAAATCTCACATAAAA+TGG - chr2_3:65961226-65961245 None:intergenic 20.0%
!!! GCTTTATGTACTTTTTTTAA+TGG - chr2_3:65961417-65961436 None:intergenic 20.0%
!!! TTAAATTTTGATTTTGGTCT+TGG - chr2_3:65961458-65961477 None:intergenic 20.0%
!!! TAGGATACTATTTAATTTCA+TGG - chr2_3:65961538-65961557 None:intergenic 20.0%
!! CTTAATGTAACTTAATGTTA+TGG - chr2_3:65961572-65961591 None:intergenic 20.0%
!! TAAATATTCACAGATATTGT+AGG - chr2_3:65961792-65961811 None:intergenic 20.0%
!! ATCTGTGAATATTTATACTT+TGG + chr2_3:65961797-65961816 Msa0306820:intron 20.0%
!! TCTGTGAATATTTATACTTT+GGG + chr2_3:65961798-65961817 Msa0306820:intron 20.0%
!! TATAACATATATATGATGCA+GGG + chr2_3:65961924-65961943 Msa0306820:intron 20.0%
! TAGAATAGGAAAATAAGGAA+GGG - chr2_3:65959451-65959470 None:intergenic 25.0%
!!! TTTCTTTGATTTTGCCAATT+TGG + chr2_3:65959494-65959513 Msa0306820:five_prime_UTR 25.0%
! AAATAGCTTCCTAGAAAAAA+GGG - chr2_3:65959617-65959636 None:intergenic 25.0%
! AAAATAGCTTCCTAGAAAAA+AGG - chr2_3:65959618-65959637 None:intergenic 25.0%
! GATGAAAGAAACAAAGAAAT+GGG - chr2_3:65959693-65959712 None:intergenic 25.0%
! AGGAACAAAAATTCTTAGAA+GGG - chr2_3:65959732-65959751 None:intergenic 25.0%
! AAGGAACAAAAATTCTTAGA+AGG - chr2_3:65959733-65959752 None:intergenic 25.0%
!! TCTAAGAATTTTTGTTCCTT+TGG + chr2_3:65959733-65959752 Msa0306820:intron 25.0%
!!! TTTTGTTCCTTTGGTTTTAT+TGG + chr2_3:65959742-65959761 Msa0306820:intron 25.0%
!!! TTTGTTCCTTTGGTTTTATT+GGG + chr2_3:65959743-65959762 Msa0306820:intron 25.0%
! TCTAGAAAGTTATGGAAAAA+TGG - chr2_3:65959810-65959829 None:intergenic 25.0%
!!! CTTTAAGATCTAGAAAGTTA+TGG - chr2_3:65959818-65959837 None:intergenic 25.0%
! CATAACTTTCTAGATCTTAA+AGG + chr2_3:65959816-65959835 Msa0306820:intron 25.0%
! TTTAAACCTTGTAAGGAAAA+GGG - chr2_3:65959855-65959874 None:intergenic 25.0%
! ATTTAAACCTTGTAAGGAAA+AGG - chr2_3:65959856-65959875 None:intergenic 25.0%
! AACACAATTTAAACCTTGTA+AGG - chr2_3:65959862-65959881 None:intergenic 25.0%
!! TAAATTGTGTTTTTCCTTCT+TGG + chr2_3:65959871-65959890 Msa0306820:intron 25.0%
! AAAAGAAAAAAAATGGTGAG+AGG + chr2_3:65960017-65960036 Msa0306820:exon 25.0%
! AGTGTAAAGATATGTTAGTA+AGG - chr2_3:65960482-65960501 None:intergenic 25.0%
! AGTCAAATGACTAATATTTG+CGG - chr2_3:65960801-65960820 None:intergenic 25.0%
!!! TTTTTTTTTTTTTGCTGAGG+TGG + chr2_3:65960841-65960860 Msa0306820:intron 25.0%
!!! TTTTTTTTTTTTGCTGAGGT+GGG + chr2_3:65960842-65960861 Msa0306820:intron 25.0%
! CAAATGATTAATATTTGCAG+TGG + chr2_3:65961009-65961028 Msa0306820:intron 25.0%
! TACGATTACAAAGATTACAA+CGG + chr2_3:65961130-65961149 Msa0306820:intron 25.0%
! AATATGTATGTCTTACATGT+TGG - chr2_3:65961248-65961267 None:intergenic 25.0%
! TGGATAAGATTTAAGAAATC+TGG - chr2_3:65961380-65961399 None:intergenic 25.0%
!!! TAATGGTTTTGTTGAGTTTA+TGG - chr2_3:65961400-65961419 None:intergenic 25.0%
! ATTATTATCTGCACTACATA+AGG + chr2_3:65961752-65961771 Msa0306820:intron 25.0%
!!! GGGTTTATTTTTTCTTAGTA+AGG + chr2_3:65961818-65961837 Msa0306820:intron 25.0%
! CTGCATCATATATATGTTAT+AGG - chr2_3:65961925-65961944 None:intergenic 25.0%
! CTATAACATATATATGATGC+AGG + chr2_3:65961923-65961942 Msa0306820:intron 25.0%
!!! TGATCACAATTTTTTTAGCA+TGG + chr2_3:65962010-65962029 Msa0306820:intron 25.0%
! TTTATGTAAAAGATAGCCTT+CGG - chr2_3:65962063-65962082 None:intergenic 25.0%
CTAGAATAGGAAAATAAGGA+AGG - chr2_3:65959452-65959471 None:intergenic 30.0%
!!! CTTCCTTATTTTCCTATTCT+AGG + chr2_3:65959450-65959469 Msa0306820:five_prime_UTR 30.0%
GCAAGAAAAGCAATTTCAAA+AGG - chr2_3:65959533-65959552 None:intergenic 30.0%
!! TTTGAAATTGCTTTTCTTGC+TGG + chr2_3:65959533-65959552 Msa0306820:five_prime_UTR 30.0%
GGATGAAAGAAACAAAGAAA+TGG - chr2_3:65959694-65959713 None:intergenic 30.0%
AAAAAAAGTTCTCACCAAGA+AGG - chr2_3:65959888-65959907 None:intergenic 30.0%
ACACAACACTGATAATTCAA+AGG - chr2_3:65960126-65960145 None:intergenic 30.0%
! TTATTGTTTTCTCACCAAGA+GGG + chr2_3:65960162-65960181 Msa0306820:CDS 30.0%
!! TTTATGAATTTGCTAGCTCT+AGG + chr2_3:65960189-65960208 Msa0306820:CDS 30.0%
TTGTGTGATTATATTGCATC+TGG + chr2_3:65960257-65960276 Msa0306820:intron 30.0%
AGAAGTGAGAGAAAGAAAAT+AGG + chr2_3:65960382-65960401 Msa0306820:intron 30.0%
!!! TTTGACTTTTGGTTCTAACT+AGG + chr2_3:65960814-65960833 Msa0306820:intron 30.0%
TCAAATGACCTATATTTGCA+GGG - chr2_3:65960942-65960961 None:intergenic 30.0%
TTCAAATGACCTATATTTGC+AGG - chr2_3:65960943-65960962 None:intergenic 30.0%
ACATCTGATTAGTAACTTCA+GGG - chr2_3:65960973-65960992 None:intergenic 30.0%
TACATCTGATTAGTAACTTC+AGG - chr2_3:65960974-65960993 None:intergenic 30.0%
TTCAAATAGCCTATATTTGC+AGG + chr2_3:65961067-65961086 Msa0306820:intron 30.0%
TCAAATAGCCTATATTTGCA+GGG + chr2_3:65961068-65961087 Msa0306820:intron 30.0%
ATTACACTCAACAAGAAAGA+TGG + chr2_3:65961269-65961288 Msa0306820:intron 30.0%
TTACACTCAACAAGAAAGAT+GGG + chr2_3:65961270-65961289 Msa0306820:intron 30.0%
TGTAACTTAATGTTATGGTG+TGG - chr2_3:65961567-65961586 None:intergenic 30.0%
ACATTAAGTTAAACTAGCAC+AGG + chr2_3:65961584-65961603 Msa0306820:intron 30.0%
CATACACAGTTAATTTAGAG+AGG + chr2_3:65961688-65961707 Msa0306820:intron 30.0%
ATATTCACAGATATTGTAGG+AGG - chr2_3:65961789-65961808 None:intergenic 30.0%
GATGCAGGGTTTAAAAAAAA+TGG + chr2_3:65961938-65961957 Msa0306820:intron 30.0%
TAGGAAAATAAGGAAGGGAA+GGG - chr2_3:65959446-65959465 None:intergenic 35.0%
ATAGGAAAATAAGGAAGGGA+AGG - chr2_3:65959447-65959466 None:intergenic 35.0%
GTGCCTAGAATAGGAAAATA+AGG - chr2_3:65959456-65959475 None:intergenic 35.0%
GAAACAGATATGCACCAAAT+TGG - chr2_3:65959511-65959530 None:intergenic 35.0%
!!! GTGTTTAGACCCTTTTTTCT+AGG + chr2_3:65959605-65959624 Msa0306820:intron 35.0%
!! GAAGGGTGTTTGAAATATGA+AGG - chr2_3:65959715-65959734 None:intergenic 35.0%
TTACCACCCAATAAAACCAA+AGG - chr2_3:65959752-65959771 None:intergenic 35.0%
! TTTCATCCCTTTTCCTTACA+AGG + chr2_3:65959846-65959865 Msa0306820:intron 35.0%
ACATTCTCAAAGAGAAGAAG+TGG + chr2_3:65960086-65960105 Msa0306820:CDS 35.0%
! CTTATTGTTTTCTCACCAAG+AGG + chr2_3:65960161-65960180 Msa0306820:CDS 35.0%
TCAAATGGCCTATATTTGCA+GGG - chr2_3:65960739-65960758 None:intergenic 35.0%
TTCAAATGGCCTATATTTGC+AGG - chr2_3:65960740-65960759 None:intergenic 35.0%
TTCAGGGACGAAAATTCAAA+TGG - chr2_3:65961053-65961072 None:intergenic 35.0%
CAAATGACTAATATTTGCGG+TGG - chr2_3:65960798-65960817 None:intergenic 35.0%
TAATATTTGCAGTGGCAGAT+TGG + chr2_3:65961017-65961036 Msa0306820:intron 35.0%
! TTGGAAGGATTAGTAACTTC+AGG + chr2_3:65961036-65961055 Msa0306820:intron 35.0%
! TGGAAGGATTAGTAACTTCA+GGG + chr2_3:65961037-65961056 Msa0306820:intron 35.0%
TATTTCGTCCCTGCAAATAT+AGG - chr2_3:65961079-65961098 None:intergenic 35.0%
TACACTCAACAAGAAAGATG+GGG + chr2_3:65961271-65961290 Msa0306820:intron 35.0%
ACTAACGTAAACACTAGTCA+CGG - chr2_3:65961341-65961360 None:intergenic 35.0%
! TAGTGTTTACGTTAGTTTCC+AGG + chr2_3:65961345-65961364 Msa0306820:intron 35.0%
! AGTGTTTACGTTAGTTTCCA+GGG + chr2_3:65961346-65961365 Msa0306820:intron 35.0%
AACTTAATGTTATGGTGTGG+AGG - chr2_3:65961564-65961583 None:intergenic 35.0%
!!! AAAGATCTCTGCTGATTTTG+TGG + chr2_3:65961961-65961980 Msa0306820:intron 35.0%
!! TTTTTAGCATGGCATGATCA+AGG + chr2_3:65962021-65962040 Msa0306820:intron 35.0%
AGTATGAACTTGCATCAAAG+TGG + chr2_3:65962088-65962107 Msa0306820:intron 35.0%
CGATCTTGACAACAATGATT+GGG - chr2_3:65962124-65962143 None:intergenic 35.0%
!!! TTGCGTTTTTTTTTCACGTC+AGG + chr2_3:65962270-65962289 Msa0306820:CDS 35.0%
!!! TGCGTTTTTTTTTCACGTCA+GGG + chr2_3:65962271-65962290 Msa0306820:CDS 35.0%
TAAAGGGTTGTGCCTAGAAT+AGG - chr2_3:65959465-65959484 None:intergenic 40.0%
!!! GTTCCTTTGGTTTTATTGGG+TGG + chr2_3:65959746-65959765 Msa0306820:intron 40.0%
GTATAGAGAACGCAACAAGT+AGG + chr2_3:65960057-65960076 Msa0306820:CDS 40.0%
! AATTCATAAAGCGTCCCTCT+TGG - chr2_3:65960179-65960198 None:intergenic 40.0%
! TGGGAGGATTAGTAACTTCA+GGG - chr2_3:65960770-65960789 None:intergenic 40.0%
! TTGGGAGGATTAGTAACTTC+AGG - chr2_3:65960771-65960790 None:intergenic 40.0%
AATATTTGCGGTGGCAGATT+GGG - chr2_3:65960789-65960808 None:intergenic 40.0%
TAATATTTGCGGTGGCAGAT+TGG - chr2_3:65960790-65960809 None:intergenic 40.0%
TCTTTCGTCCCTGCAAATAT+AGG + chr2_3:65960931-65960950 Msa0306820:intron 40.0%
CAGCACATCACATGTAGTTA+CGG + chr2_3:65961613-65961632 Msa0306820:intron 40.0%
TCACAAACCATAATCTCCGA+AGG + chr2_3:65962044-65962063 Msa0306820:intron 40.0%
AAGATAGCCTTCGGAGATTA+TGG - chr2_3:65962054-65962073 None:intergenic 40.0%
GCGATCTTGACAACAATGAT+TGG - chr2_3:65962125-65962144 None:intergenic 40.0%
TCGTAAGATCGTACGATCTT+GGG - chr2_3:65962157-65962176 None:intergenic 40.0%
AAAACGCAAATTCCGCAATC+CGG - chr2_3:65962259-65962278 None:intergenic 40.0%
!!! TTTTTTCACGTCAGGGAATG+TGG + chr2_3:65962278-65962297 Msa0306820:CDS 40.0%
ATCAGTGTTGTGTGATGCTG+AGG + chr2_3:65960133-65960152 Msa0306820:CDS 45.0%
TCTGTCGTCCCTGCAAATAT+AGG + chr2_3:65960728-65960747 Msa0306820:intron 45.0%
CCAATCATCACTTGCCACAT+GGG - chr2_3:65960888-65960907 None:intergenic 45.0%
CCATGTGGCAAGTGATGATT+GGG + chr2_3:65960886-65960905 Msa0306820:intron 45.0%
ATTTGCAGTGGCAGATTGGA+AGG + chr2_3:65961021-65961040 Msa0306820:intron 45.0%
GTAAACACTAGTCACGGAAG+AGG - chr2_3:65961335-65961354 None:intergenic 45.0%
! GAAATCTGGAGTTAGAACCC+TGG - chr2_3:65961366-65961385 None:intergenic 45.0%
!! TGTTATGGTGTGGAGGTACT+AGG - chr2_3:65961557-65961576 None:intergenic 45.0%
CTCGTAAGATCGTACGATCT+TGG - chr2_3:65962158-65962177 None:intergenic 45.0%
TCATGATGCCTCCACCAATT+TGG + chr2_3:65962178-65962197 Msa0306820:CDS 45.0%
TCCAAGATCGGAGAAGACAA+TGG + chr2_3:65962207-65962226 Msa0306820:CDS 45.0%
TCCATTGTCTTCTCCGATCT+TGG - chr2_3:65962211-65962230 None:intergenic 45.0%
!!! TCAGGGAATGTGGTTTTGTC+TGG + chr2_3:65962288-65962307 Msa0306820:CDS 45.0%
TACAGTCTGATAATCCGACC+CGG + chr2_3:65962312-65962331 Msa0306820:CDS 45.0%
AGTTCCGTGGTCAAAAGTTG+CGG - chr2_3:65962345-65962364 None:intergenic 45.0%
CCCATGTGGCAAGTGATGAT+TGG + chr2_3:65960885-65960904 Msa0306820:intron 50.0%
CCCAATCATCACTTGCCACA+TGG - chr2_3:65960889-65960908 None:intergenic 50.0%
!! GCGAGGTGGTTGGCTTAAAT+AGG + chr2_3:65960908-65960927 Msa0306820:intron 50.0%
ATGCCTCCACCAATTTGGAG+CGG + chr2_3:65962183-65962202 Msa0306820:CDS 50.0%
ATCTTGGACCCGCTCCAAAT+TGG - chr2_3:65962195-65962214 None:intergenic 50.0%
! ATTTGGAGCGGGTCCAAGAT+CGG + chr2_3:65962195-65962214 Msa0306820:CDS 50.0%
ATCGGAGAAGACAATGGAGC+AGG + chr2_3:65962213-65962232 Msa0306820:CDS 50.0%
AAAAGTTGCGGGTCGAAACC+GGG - chr2_3:65962333-65962352 None:intergenic 50.0%
CAAAAGTTGCGGGTCGAAAC+CGG - chr2_3:65962334-65962353 None:intergenic 50.0%
GTTCCGTGGTCAAAAGTTGC+GGG - chr2_3:65962344-65962363 None:intergenic 50.0%
ATTTGCGGTGGCAGATTGGG+AGG - chr2_3:65960786-65960805 None:intergenic 55.0%
TGGCAAGTGATGATTGGGCG+AGG + chr2_3:65960891-65960910 Msa0306820:intron 55.0%
CAAGTGATGATTGGGCGAGG+TGG + chr2_3:65960894-65960913 Msa0306820:intron 55.0%
TGATGATTGGGCGAGGTGGT+TGG + chr2_3:65960898-65960917 Msa0306820:intron 55.0%
! TGCCTCCACCAATTTGGAGC+GGG + chr2_3:65962184-65962203 Msa0306820:CDS 55.0%
TTGGACCCGCTCCAAATTGG+TGG - chr2_3:65962192-65962211 None:intergenic 55.0%
GGAGAAGACAATGGAGCAGG+TGG + chr2_3:65962216-65962235 Msa0306820:CDS 55.0%
! CGACCCGCAACTTTTGACCA+CGG + chr2_3:65962338-65962357 Msa0306820:CDS 55.0%
ACGGAACTAGTCCGTTCTGC+CGG + chr2_3:65962357-65962376 Msa0306820:CDS 55.0%
! GTGGGCTGTCATTAGCGACG+TGG + chr2_3:65960860-65960879 Msa0306820:intron 60.0%
TTAGCGACGTGGTGCCCATG+TGG + chr2_3:65960871-65960890 Msa0306820:intron 60.0%
GACCCGCTCCAAATTGGTGG+AGG - chr2_3:65962189-65962208 None:intergenic 60.0%
!! GGCAGAACGGACTAGTTCCG+TGG - chr2_3:65962358-65962377 None:intergenic 60.0%
GTTGCGGGTCGAAACCGGGT+CGG - chr2_3:65962329-65962348 None:intergenic 65.0%
ATGGAGCAGGTGGCGCACCG+CGG + chr2_3:65962226-65962245 Msa0306820:CDS 70.0%
CGCAATCCGGCGCTCTTCCG+CGG - chr2_3:65962246-65962265 None:intergenic 70.0%
!! CGCGGAAGAGCGCCGGATTG+CGG + chr2_3:65962244-65962263 Msa0306820:CDS 70.0%
!! GGCGCACCGCGGAAGAGCGC+CGG + chr2_3:65962237-65962256 Msa0306820:CDS 80.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 65959397 65962386 65959397 ID=Msa0306820;Name=Msa0306820
chr2_3 mRNA 65959397 65962386 65959397 ID=Msa0306820-mRNA-1;Parent=Msa0306820;Name=Msa0306820-mRNA-1;_AED=0.42;_eAED=0.42;_QI=175|0.5|0.66|0.66|0.5|0.33|3|0|142
chr2_3 exon 65959397 65959554 65959397 ID=Msa0306820-mRNA-1:exon:21971;Parent=Msa0306820-mRNA-1
chr2_3 exon 65960012 65960210 65960012 ID=Msa0306820-mRNA-1:exon:21972;Parent=Msa0306820-mRNA-1
chr2_3 exon 65962140 65962386 65962140 ID=Msa0306820-mRNA-1:exon:21973;Parent=Msa0306820-mRNA-1
chr2_3 five_prime_UTR 65959397 65959554 65959397 ID=Msa0306820-mRNA-1:five_prime_utr;Parent=Msa0306820-mRNA-1
chr2_3 five_prime_UTR 65960012 65960028 65960012 ID=Msa0306820-mRNA-1:five_prime_utr;Parent=Msa0306820-mRNA-1
chr2_3 CDS 65960029 65960210 65960029 ID=Msa0306820-mRNA-1:cds;Parent=Msa0306820-mRNA-1
chr2_3 CDS 65962140 65962386 65962140 ID=Msa0306820-mRNA-1:cds;Parent=Msa0306820-mRNA-1
Gene Sequence

>Msa0306820

ATGGTGAGAGGAAAGACACAAATGAAGCGTATAGAGAACGCAACAAGTAGGCAAGTAACATTCTCAAAGAGAAGAAGTGGTTTGTTGAAGAAAGCCTTTGAATTATCAGTGTTGTGTGATGCTGAGGTTGCTCTTATTGTTTTCTCACCAAGAGGGACGCTTTATGAATTTGCTAGCTCTAGATCGCGATCTAGATCCCAAGATCGTACGATCTTACGAGTCATGATGCCTCCACCAATTTGGAGCGGGTCCAAGATCGGAGAAGACAATGGAGCAGGTGGCGCACCGCGGAAGAGCGCCGGATTGCGGAATTTGCGTTTTTTTTTCACGTCAGGGAATGTGGTTTTGTCTGGTTACAGTCTGATAATCCGACCCGGTTTCGACCCGCAACTTTTGACCACGGAACTAGTCCGTTCTGCCGGAAATTGA

Protein sequence

>Msa0306820

MVRGKTQMKRIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPRGTLYEFASSRSRSRSQDRTILRVMMPPPIWSGSKIGEDNGAGGAPRKSAGLRNLRFFFTSGNVVLSGYSLIIRPGFDPQLLTTELVRSAGN*