AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0315960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0315960 MtrunA17_Chr2g0287731 97.927 386 5 2 1 383 1 386 0.0 764
Msa0315960 MtrunA17_Chr4g0065661 72.308 260 66 3 124 382 103 357 4.45e-136 392
Msa0315960 MtrunA17_Chr1g0181351 43.949 314 136 6 66 378 68 342 2.02e-87 268
Msa0315960 MtrunA17_Chr7g0264071 46.718 259 105 4 124 382 103 328 1.07e-77 243
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0315960 AT5G19080.1 58.710 310 97 8 91 382 79 375 1.63e-117 346
Msa0315960 AT3G06140.1 53.521 355 131 8 34 382 30 356 1.42e-105 315
Msa0315960 AT3G09770.1 48.561 278 129 5 106 378 101 369 1.80e-85 265
Msa0315960 AT3G53410.1 45.804 286 140 6 98 382 26 297 1.66e-80 249
Msa0315960 AT5G03200.1 41.398 372 167 11 6 376 12 333 2.66e-74 234
Msa0315960 AT3G09770.2 45.749 247 120 5 106 347 101 338 4.71e-65 211

Find 164 sgRNAs with CRISPR-Local

Find 479 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATAATTTGTCTATAATT+TGG 0.138857 2_4:+12708611 Msa0315960:three_prime_UTR
CTGGCCAACTCCTTTCTTAA+AGG 0.165355 2_4:-12707144 None:intergenic
CTGAAGGCTGAGCAAATTTC+TGG 0.188908 2_4:-12707163 None:intergenic
AGTGGTGGTGGTTGTGGTGG+TGG 0.206257 2_4:-12701757 None:intergenic
ACGGCATATAGGGCATTTAT+TGG 0.230340 2_4:-12708402 None:intergenic
CCTTACTGCAGACATGTAAA+AGG 0.242471 2_4:-12708554 None:intergenic
TGGGGCTGTGGTTGAGGTTG+TGG 0.249348 2_4:-12702011 None:intergenic
GCAGCAGCAGGAGCGTAAAA+AGG 0.256123 2_4:-12702164 None:intergenic
AATACGATTGGTAGTAGAAT+TGG 0.267852 2_4:-12702072 None:intergenic
GGTGGTGGTGGTGGAGGGTG+TGG 0.271195 2_4:-12701942 None:intergenic
CAGAAATTTGCTCAGCCTTC+AGG 0.272025 2_4:+12707164 Msa0315960:CDS
GGGGCTGTGGTTGAGGTTGT+GGG 0.283354 2_4:-12702010 None:intergenic
TTGGGAGGATAGTTATTGTT+AGG 0.287510 2_4:-12702053 None:intergenic
CAATAATTTGTCTATAATTT+GGG 0.288444 2_4:+12708612 Msa0315960:three_prime_UTR
AGTTGTGGTGGTTGTGGAGG+TGG 0.300822 2_4:-12701876 None:intergenic
GGTGGTGGTGGCGGTGGTGG+TGG 0.305078 2_4:-12701900 None:intergenic
TCCCTTGCTCGGCGAACATT+AGG 0.307353 2_4:-12708756 None:intergenic
GATGGGAGTGGTGGTGGTTG+TGG 0.329259 2_4:-12701763 None:intergenic
GGTGGAAGTTGTGGTGGTTG+TGG 0.336374 2_4:-12701882 None:intergenic
CAATTGGCTGACGGCATATA+GGG 0.347981 2_4:-12708412 None:intergenic
TGTTGAGGTGGTGGTGGTGG+TGG 0.354310 2_4:-12701951 None:intergenic
GTTGTGGTGGTTGTGGAGGT+GGG 0.354321 2_4:-12701875 None:intergenic
TCAATTGGCTGACGGCATAT+AGG 0.355159 2_4:-12708413 None:intergenic
TGGCCAACTCCTTTCTTAAA+GGG 0.357604 2_4:-12707143 None:intergenic
CTTTGTTGAGGTGGTGGTGG+TGG 0.357983 2_4:-12701954 None:intergenic
TAAGGTGGTGGTGGCGGTGG+TGG 0.361132 2_4:-12701903 None:intergenic
TTTGCTCAGCCTTCAGGAAC+AGG 0.362178 2_4:+12707170 Msa0315960:CDS
GGCTTTGATGACAGTGATCC+TGG 0.364670 2_4:+12707494 Msa0315960:CDS
TACGTGTTTGAGGGAAGATT+TGG 0.366507 2_4:+12708639 Msa0315960:three_prime_UTR
TCAACCTTATCACACTCAAA+TGG 0.371823 2_4:+12701809 Msa0315960:exon
GTGGTGGTGGTTGTGGTGGT+GGG 0.376307 2_4:-12701756 None:intergenic
GGTTGAGGTTGTGGGGTGTA+AGG 0.377971 2_4:-12702002 None:intergenic
AGGATAGTTATTGTTAGGGT+TGG 0.378115 2_4:-12702048 None:intergenic
TTCTTAAAGGGGACTTTGAC+TGG 0.379977 2_4:-12707131 None:intergenic
TCAGCCAATTGAGGAACTTA+TGG 0.388032 2_4:+12708424 Msa0315960:CDS
TTAAGAGAACTATATGGAAT+AGG 0.390290 2_4:+12707455 Msa0315960:CDS
GTCTGCAGTAAGGTAATATA+TGG 0.391862 2_4:+12708564 Msa0315960:three_prime_UTR
GCAAATTACTCAAGCTGTCT+TGG 0.394705 2_4:+12707355 Msa0315960:CDS
AAACAATGTTAATGTTCATA+AGG 0.399525 2_4:+12702238 Msa0315960:CDS
TTGAGGAACTTATGGAGATC+AGG 0.413330 2_4:+12708432 Msa0315960:CDS
ATACGATTGGTAGTAGAATT+GGG 0.424103 2_4:-12702071 None:intergenic
GGTAAGACAGCTGTATCCTT+TGG 0.424454 2_4:-12707545 None:intergenic
AAAGAAACAAGGTAATGATC+AGG 0.424687 2_4:-12702293 None:intergenic
GCAGTTTGATGATCAACATA+AGG 0.425772 2_4:-12702203 None:intergenic
CCCTTGCTCGGCGAACATTA+GGG 0.426270 2_4:-12708755 None:intergenic
TATGAGTTAAGAGAACTATA+TGG 0.428547 2_4:+12707449 Msa0315960:CDS
CCGAGCAAGGGAAGCGAACA+AGG 0.429100 2_4:+12708767 Msa0315960:three_prime_UTR
AATGAATGGGGCTGTGGTTG+AGG 0.432432 2_4:-12702017 None:intergenic
TGGGAGGATAGTTATTGTTA+GGG 0.438633 2_4:-12702052 None:intergenic
CGAAGGAAGAAGATAAATGT+AGG 0.439842 2_4:+12707078 Msa0315960:CDS
TGTCTTACCTTGTCGACATA+TGG 0.443782 2_4:+12707559 Msa0315960:CDS
AATATGCGCTGAAACATGTT+TGG 0.444189 2_4:+12707265 Msa0315960:CDS
TAGTAAGGTGGTGGTGGCGG+TGG 0.449369 2_4:-12701906 None:intergenic
GGGAGTGGTGGTGGTTGTGG+TGG 0.449443 2_4:-12701760 None:intergenic
CCTTGTTCGCTTCCCTTGCT+CGG 0.453044 2_4:-12708767 None:intergenic
ATCTCCATAAGTTCCTCAAT+TGG 0.455073 2_4:-12708428 None:intergenic
GGCGGTGGTGGTGGAAGTTG+TGG 0.458515 2_4:-12701891 None:intergenic
TAACTTTGTTGAGGTGGTGG+TGG 0.459142 2_4:-12701957 None:intergenic
TTTGGGTGCGTACGTGTTTG+AGG 0.459978 2_4:+12708629 Msa0315960:three_prime_UTR
ATTGACTACAGTTAACGAAA+AGG 0.466224 2_4:-12708593 None:intergenic
CAACCTTATCACACTCAAAT+GGG 0.468509 2_4:+12701810 Msa0315960:exon
TTGACTACAGTTAACGAAAA+GGG 0.469669 2_4:-12708592 None:intergenic
AGACAGATTCTGTGGATTGA+TGG 0.470345 2_4:+12707419 Msa0315960:CDS
CTTACTGCAGACATGTAAAA+GGG 0.472787 2_4:-12708553 None:intergenic
GGGGTGTAAGGAGTAGTTGA+GGG 0.474874 2_4:-12701990 None:intergenic
GGAAGTTGTGGTGGTTGTGG+AGG 0.475161 2_4:-12701879 None:intergenic
GCATCTAGCACGGAATCATC+AGG 0.477136 2_4:-12707320 None:intergenic
GGTTGGAGAAGTAGAATGAA+TGG 0.487810 2_4:-12702031 None:intergenic
ATACCCATTTGAGTGTGATA+AGG 0.490658 2_4:-12701813 None:intergenic
TCCCTAATGTTCGCCGAGCA+AGG 0.490774 2_4:+12708754 Msa0315960:three_prime_UTR
CCGTGTCATCTATACTGTAT+AGG 0.492595 2_4:+12708696 Msa0315960:three_prime_UTR
GATCTTTCAAAGCCTTCACC+TGG 0.493980 2_4:+12707221 Msa0315960:CDS
GTTGGAGAAGTAGAATGAAT+GGG 0.498547 2_4:-12702030 None:intergenic
CATATTACACACTCCTTCCC+AGG 0.500384 2_4:-12707512 None:intergenic
TAGTAGTAACTTTGTTGAGG+TGG 0.501465 2_4:-12701963 None:intergenic
TTGACTGGTACAAATGCATC+AGG 0.502267 2_4:-12707116 None:intergenic
TAATAGTAAGGTGGTGGTGG+CGG 0.503251 2_4:-12701909 None:intergenic
TAGTAACTTTGTTGAGGTGG+TGG 0.505643 2_4:-12701960 None:intergenic
TTGGGTGCGTACGTGTTTGA+GGG 0.507585 2_4:+12708630 Msa0315960:three_prime_UTR
GGGTGTAAGGAGTAGTTGAG+GGG 0.509446 2_4:-12701989 None:intergenic
AAATATAATGACACCTGGCT+TGG 0.510867 2_4:+12708793 Msa0315960:three_prime_UTR
GTCCCCTTTAAGAAAGGAGT+TGG 0.514493 2_4:+12707140 Msa0315960:CDS
TTACAAACACGAATTCAATA+CGG 0.515356 2_4:-12708817 None:intergenic
GTCAAAGTCCCCTTTAAGAA+AGG 0.515621 2_4:+12707134 Msa0315960:CDS
CATCTAACTCAAAGAAGCCT+AGG 0.517494 2_4:-12707199 None:intergenic
AATTCAATACGGACCAAGCC+AGG 0.523734 2_4:-12708806 None:intergenic
TCATGCAATTCAACTTAACA+TGG 0.528197 2_4:-12708491 None:intergenic
GGTTCTGTTGAGTAATAGTA+AGG 0.528574 2_4:-12701921 None:intergenic
GGGCTGTGGTTGAGGTTGTG+GGG 0.529194 2_4:-12702009 None:intergenic
CTTGAGTAATTTGCATGTGA+GGG 0.532696 2_4:-12707346 None:intergenic
TGGGGTGTAAGGAGTAGTTG+AGG 0.536360 2_4:-12701991 None:intergenic
TCGATGCCGTCTTTGATGGA+AGG 0.538621 2_4:+12702321 Msa0315960:CDS
CCCTAATGTTCGCCGAGCAA+GGG 0.541663 2_4:+12708755 Msa0315960:three_prime_UTR
GGAGTGGAAGAAGCAGCAGC+AGG 0.541795 2_4:-12702176 None:intergenic
GGTGTAAGGAGTAGTTGAGG+GGG 0.542550 2_4:-12701988 None:intergenic
ATAGGAAGCTCAGAAGCTGC+AGG 0.551666 2_4:+12707473 Msa0315960:CDS
AGGTCAATCCCTGTTCCTGA+AGG 0.552318 2_4:-12707179 None:intergenic
AAACGGTGCAAATAACAAGA+TGG 0.554009 2_4:-12701781 None:intergenic
TGTTGATTGAGATGATATGA+AGG 0.555406 2_4:-12702104 None:intergenic
TGGTGGTGGGTGAGAAATCA+CGG 0.557116 2_4:-12701743 None:intergenic
AAGTAGAATGAATGGGGCTG+TGG 0.560453 2_4:-12702023 None:intergenic
AACAACAACCGCAATATGCA+TGG 0.563639 2_4:+12702126 Msa0315960:CDS
AACCACTGCAAAAGTGTACA+TGG 0.563738 2_4:-12708662 None:intergenic
TGAGGAACTTATGGAGATCA+GGG 0.564292 2_4:+12708433 Msa0315960:CDS
ATCTTTCAAAGCCTTCACCT+GGG 0.564713 2_4:+12707222 Msa0315960:CDS
GGCCAACTCCTTTCTTAAAG+GGG 0.565364 2_4:-12707142 None:intergenic
AACGGTGCAAATAACAAGAT+GGG 0.566574 2_4:-12701780 None:intergenic
AGGATGATATTGAATACGAT+TGG 0.567391 2_4:-12702084 None:intergenic
GCTTGAGTAATTTGCATGTG+AGG 0.568254 2_4:-12707347 None:intergenic
AACATGTTTGGAAACTCCCT+CGG 0.570776 2_4:+12707277 Msa0315960:CDS
TATATGCCGTCAGCCAATTG+AGG 0.570906 2_4:+12708415 Msa0315960:CDS
TAACAAGATGGGAGTGGTGG+TGG 0.576356 2_4:-12701769 None:intergenic
AAGACATCTTCCCCAGGTGA+AGG 0.578612 2_4:-12707233 None:intergenic
TTGCTCAGCCTTCAGGAACA+GGG 0.578956 2_4:+12707171 Msa0315960:CDS
TGATAAGGTTGAAGAAGAAA+CGG 0.579846 2_4:-12701798 None:intergenic
GTGTAAGGAGTAGTTGAGGG+GGG 0.580892 2_4:-12701987 None:intergenic
GTTTCAGCGCATATTACAAG+AGG 0.581361 2_4:-12707257 None:intergenic
GTTGAGTAATAGTAAGGTGG+TGG 0.583381 2_4:-12701915 None:intergenic
GACTTACCTTCCATCAAAGA+CGG 0.589000 2_4:-12702327 None:intergenic
GCTTTGATGACAGTGATCCT+GGG 0.589338 2_4:+12707495 Msa0315960:CDS
GGTGGTGGTGGAAGTTGTGG+TGG 0.595150 2_4:-12701888 None:intergenic
ACAAATGCATCAGGAAAGAG+TGG 0.595745 2_4:-12707107 None:intergenic
GAGTAATAGTAAGGTGGTGG+TGG 0.595861 2_4:-12701912 None:intergenic
TCAGGAACAGGGATTGACCT+AGG 0.597428 2_4:+12707182 Msa0315960:CDS
TGCAAATAACAAGATGGGAG+TGG 0.598240 2_4:-12701775 None:intergenic
AAGAAACAAGGTAATGATCA+GGG 0.599115 2_4:-12702292 None:intergenic
CGAGCAAGGGAAGCGAACAA+GGG 0.601942 2_4:+12708768 Msa0315960:three_prime_UTR
TGATGATCAACATAAGGAGG+TGG 0.603587 2_4:-12702197 None:intergenic
CCTATACAGTATAGATGACA+CGG 0.604567 2_4:-12708696 None:intergenic
AAGTAGTTAGACAGATTCTG+TGG 0.607111 2_4:+12707411 Msa0315960:CDS
GGATAGTAGTAACTTTGTTG+AGG 0.607650 2_4:-12701966 None:intergenic
TAAGTTCCTCAATTGGCTGA+CGG 0.613922 2_4:-12708421 None:intergenic
GCTGTCTTGGAGAAAAGTAA+TGG 0.618568 2_4:+12707368 Msa0315960:CDS
GGTTAAGCTGATCAATCTCA+AGG 0.622530 2_4:-12702271 None:intergenic
TGATGACAGTGATCCTGGGA+AGG 0.623579 2_4:+12707499 Msa0315960:CDS
GTGAGGGGATGCATCTAGCA+CGG 0.624270 2_4:-12707330 None:intergenic
ATCAACATAAGGAGGTGGAG+TGG 0.626424 2_4:-12702192 None:intergenic
TCTGTTGAGTAATAGTAAGG+TGG 0.627423 2_4:-12701918 None:intergenic
TCTTTCAAAGCCTTCACCTG+GGG 0.628972 2_4:+12707223 Msa0315960:CDS
TACTGCAGACATGTAAAAGG+GGG 0.629871 2_4:-12708551 None:intergenic
TTGGAGAAGTAGAATGAATG+GGG 0.634290 2_4:-12702029 None:intergenic
GGTGGAGGCCATGCATATTG+CGG 0.636895 2_4:-12702134 None:intergenic
AGAGGAAAGACATCTTCCCC+AGG 0.641748 2_4:-12707239 None:intergenic
CATGCAATTCAACTTAACAT+GGG 0.644199 2_4:-12708490 None:intergenic
AATATGCATGACTGAACCAA+AGG 0.650537 2_4:+12707529 Msa0315960:CDS
TTACTGCAGACATGTAAAAG+GGG 0.651725 2_4:-12708552 None:intergenic
GGGCGAAATATAATGACACC+TGG 0.651878 2_4:+12708788 Msa0315960:three_prime_UTR
CATCGAAAACAAAAGAAACA+AGG 0.651934 2_4:-12702304 None:intergenic
ACACTCAAATGGGTATTACG+TGG 0.668710 2_4:+12701820 Msa0315960:exon
ACTGCAGACATGTAAAAGGG+GGG 0.672999 2_4:-12708550 None:intergenic
AATCTTACCATATGTCGACA+AGG 0.677295 2_4:-12707566 None:intergenic
ATGCAATTCAACTTAACATG+GGG 0.677496 2_4:-12708489 None:intergenic
TTGGAGAAAAGTAATGGTGG+TGG 0.678741 2_4:+12707374 Msa0315960:CDS
CTGCAGACATGTAAAAGGGG+GGG 0.682121 2_4:-12708549 None:intergenic
GTTTGATGATCAACATAAGG+AGG 0.683417 2_4:-12702200 None:intergenic
TTGAGTAATTTGCATGTGAG+GGG 0.691901 2_4:-12707345 None:intergenic
AAATAACAAGATGGGAGTGG+TGG 0.701409 2_4:-12701772 None:intergenic
CAGAAAAGAGTACGACTCGG+TGG 0.714961 2_4:-12701674 None:intergenic
GTCTTGGAGAAAAGTAATGG+TGG 0.719546 2_4:+12707371 Msa0315960:CDS
AAACAGAAAAGAGTACGACT+CGG 0.729013 2_4:-12701677 None:intergenic
CTATACAGTATAGATGACAC+GGG 0.741653 2_4:-12708695 None:intergenic
CGATTGGTAGTAGAATTGGG+AGG 0.746574 2_4:-12702068 None:intergenic
GTGAGTGTGCAAAAGCTCTG+CGG 0.761192 2_4:+12708372 Msa0315960:CDS
TGGTGGGTGAGAAATCACGG+CGG 0.845233 2_4:-12701740 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATATATATATTTATTT+TGG + chr2_4:12706310-12706329 Msa0315960:intron 0.0%
!!! ATATATAATTCATAAACTTT+TGG - chr2_4:12703014-12703033 None:intergenic 10.0%
!!! TGAATTTATATTATTAGTTT+TGG + chr2_4:12706369-12706388 Msa0315960:intron 10.0%
!!! TTTCAAGTTAAAATTAATTC+TGG - chr2_4:12702727-12702746 None:intergenic 15.0%
!!! ATTAATTTTAACTTGAAACT+AGG + chr2_4:12702729-12702748 Msa0315960:intron 15.0%
!!! GAATTTTAAAAACTTAGTTA+TGG - chr2_4:12703552-12703571 None:intergenic 15.0%
!!! AAGTTTTTAAAATTCTTATC+TGG + chr2_4:12703557-12703576 Msa0315960:intron 15.0%
!! ACAATTTCATTAATATACTA+TGG - chr2_4:12704670-12704689 None:intergenic 15.0%
!! ATATAAAATAGTATCTTAGT+AGG - chr2_4:12705118-12705137 None:intergenic 15.0%
!!! ATGTTTCTTGTAATTTTTAA+AGG - chr2_4:12705749-12705768 None:intergenic 15.0%
!! TATTATATATACAAAATGCA+CGG + chr2_4:12706197-12706216 Msa0315960:intron 15.0%
!!! ATATTACTAAAAGTGTAAAA+TGG + chr2_4:12707974-12707993 Msa0315960:intron 15.0%
!!! TCAATAATTTGTCTATAATT+TGG + chr2_4:12708611-12708630 Msa0315960:three_prime_UTR 15.0%
!!! CAATAATTTGTCTATAATTT+GGG + chr2_4:12708612-12708631 Msa0315960:three_prime_UTR 15.0%
!!! TTTTCTTTCTCATAGAAAAA+AGG + chr2_4:12701697-12701716 Msa0315960:five_prime_UTR 20.0%
!! TTTCTTTCTCATAGAAAAAA+GGG + chr2_4:12701698-12701717 Msa0315960:five_prime_UTR 20.0%
!! AAACAATGTTAATGTTCATA+AGG + chr2_4:12702238-12702257 Msa0315960:CDS 20.0%
!! AATTTATAGTGGTTTATGTT+TGG - chr2_4:12702822-12702841 None:intergenic 20.0%
!! CAAAAACATAAAAAAGAAGA+AGG + chr2_4:12703159-12703178 Msa0315960:intron 20.0%
!!! AAGTTAGTACATTTTTCTTA+CGG - chr2_4:12703208-12703227 None:intergenic 20.0%
!! GTTTCTATATATACTAGATT+AGG - chr2_4:12703268-12703287 None:intergenic 20.0%
!! CATATAGTCATATATTATGT+AGG + chr2_4:12703515-12703534 Msa0315960:intron 20.0%
!! AAATTACAAAACAATTCACA+TGG - chr2_4:12703680-12703699 None:intergenic 20.0%
!! GTAATGTTTGTTTATGAAAA+TGG - chr2_4:12704259-12704278 None:intergenic 20.0%
!! TTTCATTAATATACTATGGT+CGG - chr2_4:12704666-12704685 None:intergenic 20.0%
!!! GCTGATATTTTAAGAAAAAA+AGG + chr2_4:12705028-12705047 Msa0315960:intron 20.0%
!!! TTTTTTTAAGAGACTTAAAG+TGG + chr2_4:12705224-12705243 Msa0315960:intron 20.0%
!! ATAATATACCAAGTATATGT+TGG + chr2_4:12705476-12705495 Msa0315960:intron 20.0%
!! GTTTCAAGAATATGAAAAAA+CGG + chr2_4:12706595-12706614 Msa0315960:intron 20.0%
!! ACATTATTAAATTGCCAATA+TGG - chr2_4:12706727-12706746 None:intergenic 20.0%
!! GGATAAGTATAATTGTATAA+TGG + chr2_4:12706984-12707003 Msa0315960:intron 20.0%
!! ATGAAGAAAACAAAAATTGA+AGG - chr2_4:12708029-12708048 None:intergenic 20.0%
!!! ACATGTATTGTTTAAAATCA+TGG + chr2_4:12708112-12708131 Msa0315960:intron 20.0%
!!! CATGTATTGTTTAAAATCAT+GGG + chr2_4:12708113-12708132 Msa0315960:intron 20.0%
! CTTGTTTGTTTATGTATGTT+TGG + chr2_4:12702380-12702399 Msa0315960:intron 25.0%
! TAGTAGAATTAGTGTATGTT+TGG + chr2_4:12702442-12702461 Msa0315960:intron 25.0%
! TCTGATTAAAAGTGAATTGA+AGG + chr2_4:12702502-12702521 Msa0315960:intron 25.0%
! TAAAAGTGAATTGAAGGTAA+AGG + chr2_4:12702508-12702527 Msa0315960:intron 25.0%
! AAAAGTGAATTGAAGGTAAA+GGG + chr2_4:12702509-12702528 Msa0315960:intron 25.0%
!!! TACAAATTTTAGCTTCAAGT+AGG + chr2_4:12702606-12702625 Msa0315960:intron 25.0%
! TAAAATTAATTCTGGACACA+TGG - chr2_4:12702719-12702738 None:intergenic 25.0%
!! AAAGTGAGTTGAATTTATAG+TGG - chr2_4:12702833-12702852 None:intergenic 25.0%
! ATCAGAGTTGTTAACTAATT+TGG + chr2_4:12703049-12703068 Msa0315960:intron 25.0%
! TAATAACATCATGTTTACGT+TGG - chr2_4:12703240-12703259 None:intergenic 25.0%
! TCTAGTATATATAGAAACCT+TGG + chr2_4:12703270-12703289 Msa0315960:intron 25.0%
! CTAGTATATATAGAAACCTT+GGG + chr2_4:12703271-12703290 Msa0315960:intron 25.0%
! TAGTATATATAGAAACCTTG+GGG + chr2_4:12703272-12703291 Msa0315960:intron 25.0%
!! TCTAATTGATTCAAAACTCT+AGG + chr2_4:12703362-12703381 Msa0315960:intron 25.0%
!! AAAACTCTAGGAAATTGTTT+AGG + chr2_4:12703374-12703393 Msa0315960:intron 25.0%
! TGGATAAGATGTTATGAATT+AGG + chr2_4:12703437-12703456 Msa0315960:intron 25.0%
! GGATAAGATGTTATGAATTA+GGG + chr2_4:12703438-12703457 Msa0315960:intron 25.0%
! CACATGGTTACATAATATAT+GGG - chr2_4:12703664-12703683 None:intergenic 25.0%
! TCACATGGTTACATAATATA+TGG - chr2_4:12703665-12703684 None:intergenic 25.0%
! TCAAATATCTCTGTCATTAT+AGG + chr2_4:12703735-12703754 Msa0315960:intron 25.0%
! CAAATATCTCTGTCATTATA+GGG + chr2_4:12703736-12703755 Msa0315960:intron 25.0%
! AAGATGAATGAGTATATTGT+AGG - chr2_4:12704029-12704048 None:intergenic 25.0%
!! AGTTAAAATGATTTTCAGAG+TGG + chr2_4:12704585-12704604 Msa0315960:intron 25.0%
!! GTTAAAATGATTTTCAGAGT+GGG + chr2_4:12704586-12704605 Msa0315960:intron 25.0%
!! TTAAAATGATTTTCAGAGTG+GGG + chr2_4:12704587-12704606 Msa0315960:intron 25.0%
! GATTCTAATCTTATGAATGA+TGG - chr2_4:12704808-12704827 None:intergenic 25.0%
!! TTGTACTTCTTTGATACTTT+TGG + chr2_4:12704881-12704900 Msa0315960:intron 25.0%
!!! TTTTAAGAAAAAAAGGTAGC+AGG + chr2_4:12705035-12705054 Msa0315960:intron 25.0%
!! CACTAAAATCTAAAATAACG+AGG - chr2_4:12705390-12705409 None:intergenic 25.0%
!!! TTTAGATTTTAGTGAAAGTG+TGG + chr2_4:12705396-12705415 Msa0315960:intron 25.0%
! ATTACAAGAAACATGTTTGA+TGG + chr2_4:12705755-12705774 Msa0315960:intron 25.0%
! ACGTAAAGGTAATATTTACA+TGG - chr2_4:12705962-12705981 None:intergenic 25.0%
!! TTATTTTCCAAATTTAGCGA+GGG - chr2_4:12706037-12706056 None:intergenic 25.0%
!!! TTTATTTTCCAAATTTAGCG+AGG - chr2_4:12706038-12706057 None:intergenic 25.0%
!!! TCTATGAACTCGTTATTTTA+AGG - chr2_4:12706159-12706178 None:intergenic 25.0%
!!! CAAGAAATTTTAAGTAGTGT+AGG - chr2_4:12706680-12706699 None:intergenic 25.0%
!! TTCTATTTTGTTCTTCTGTT+AGG - chr2_4:12706874-12706893 None:intergenic 25.0%
! TATACTTATCCATCTTCAAA+CGG - chr2_4:12706975-12706994 None:intergenic 25.0%
! TATGAGTTAAGAGAACTATA+TGG + chr2_4:12707449-12707468 Msa0315960:CDS 25.0%
! TTAAGAGAACTATATGGAAT+AGG + chr2_4:12707455-12707474 Msa0315960:CDS 25.0%
! AGTAATATTAGCAATGACAT+TGG - chr2_4:12707962-12707981 None:intergenic 25.0%
!! TACTAAAAGTGTAAAATGGA+TGG + chr2_4:12707978-12707997 Msa0315960:intron 25.0%
! ATAAATTAAGATTATACCGC+AGG - chr2_4:12708054-12708073 None:intergenic 25.0%
!!! TCTTAATTTATTTTCAGCGA+TGG + chr2_4:12708063-12708082 Msa0315960:intron 25.0%
!!! CTTAATTTATTTTCAGCGAT+GGG + chr2_4:12708064-12708083 Msa0315960:intron 25.0%
! TATCAACTATATGTAATGCA+AGG - chr2_4:12708264-12708283 None:intergenic 25.0%
! TCACAATAGGAAATGAAATA+TGG - chr2_4:12708310-12708329 None:intergenic 25.0%
! AATATGAGAATAGTCACAAT+AGG - chr2_4:12708323-12708342 None:intergenic 25.0%
! TTACAAACACGAATTCAATA+CGG - chr2_4:12708820-12708839 None:intergenic 25.0%
TGATAAGGTTGAAGAAGAAA+CGG - chr2_4:12701801-12701820 None:intergenic 30.0%
! ATACGATTGGTAGTAGAATT+GGG - chr2_4:12702074-12702093 None:intergenic 30.0%
! AATACGATTGGTAGTAGAAT+TGG - chr2_4:12702075-12702094 None:intergenic 30.0%
AGGATGATATTGAATACGAT+TGG - chr2_4:12702087-12702106 None:intergenic 30.0%
! TGTTGATTGAGATGATATGA+AGG - chr2_4:12702107-12702126 None:intergenic 30.0%
AAGAAACAAGGTAATGATCA+GGG - chr2_4:12702295-12702314 None:intergenic 30.0%
AAAGAAACAAGGTAATGATC+AGG - chr2_4:12702296-12702315 None:intergenic 30.0%
CATCGAAAACAAAAGAAACA+AGG - chr2_4:12702307-12702326 None:intergenic 30.0%
AAGGTAAAGGGATTTATGTA+TGG + chr2_4:12702521-12702540 Msa0315960:intron 30.0%
GTTGTAATCAATTATACACC+TGG + chr2_4:12702658-12702677 Msa0315960:intron 30.0%
GATCTTGAGTTAATTTCTTG+AGG + chr2_4:12702986-12703005 Msa0315960:intron 30.0%
AGAGTTGTTAACTAATTTGG+TGG + chr2_4:12703052-12703071 Msa0315960:intron 30.0%
! ATTTTGCTTGATTGCATAGT+AGG + chr2_4:12703078-12703097 Msa0315960:intron 30.0%
! TTTTGCTTGATTGCATAGTA+GGG + chr2_4:12703079-12703098 Msa0315960:intron 30.0%
! TTAGTACATTTTTCTTACGG+AGG - chr2_4:12703205-12703224 None:intergenic 30.0%
AGTATATATAGAAACCTTGG+GGG + chr2_4:12703273-12703292 Msa0315960:intron 30.0%
TTGATACTACTTAGAAACAG+TGG - chr2_4:12703333-12703352 None:intergenic 30.0%
AATTGTTTAGGTAATCTGCA+AGG + chr2_4:12703386-12703405 Msa0315960:intron 30.0%
ATTGTTTAGGTAATCTGCAA+GGG + chr2_4:12703387-12703406 Msa0315960:intron 30.0%
TACATCCTCTTTAACATGTT+AGG + chr2_4:12703700-12703719 Msa0315960:intron 30.0%
AACAACCTAACATGTTAAAG+AGG - chr2_4:12703708-12703727 None:intergenic 30.0%
ATCGAAGTCATTCTGAATTT+AGG - chr2_4:12703776-12703795 None:intergenic 30.0%
TTCATGATAGTTTCTCCAAT+AGG + chr2_4:12703925-12703944 Msa0315960:intron 30.0%
TATAGAAAGGAGAATACATC+AGG - chr2_4:12703992-12704011 None:intergenic 30.0%
GTCTGAAAATACTAGGTTAT+AGG - chr2_4:12704102-12704121 None:intergenic 30.0%
! CACTTGATTTTCTCTCATAT+TGG + chr2_4:12704150-12704169 Msa0315960:intron 30.0%
TTTGTCTCATACAACATTGT+TGG + chr2_4:12704191-12704210 Msa0315960:intron 30.0%
AACACTTCAAAATTGATGAG+AGG + chr2_4:12704385-12704404 Msa0315960:intron 30.0%
!!! TCTATTTTAACACTGGAAAG+GGG - chr2_4:12704561-12704580 None:intergenic 30.0%
!!! CTCTATTTTAACACTGGAAA+GGG - chr2_4:12704562-12704581 None:intergenic 30.0%
!!! TCTCTATTTTAACACTGGAA+AGG - chr2_4:12704563-12704582 None:intergenic 30.0%
!!! ACTACTCTCTATTTTAACAC+TGG - chr2_4:12704568-12704587 None:intergenic 30.0%
TAGACACAGAAGACAAAATA+TGG - chr2_4:12704839-12704858 None:intergenic 30.0%
CAGGATAGAAGATAAAATCA+TGG + chr2_4:12705054-12705073 Msa0315960:intron 30.0%
!! TAATTCAAGTTGAGAGTCAA+AGG - chr2_4:12705193-12705212 None:intergenic 30.0%
ACTCTCAACTTGAATTAAAG+TGG + chr2_4:12705196-12705215 Msa0315960:intron 30.0%
! GACTTAAAGTGGTTAGTTAA+TGG + chr2_4:12705235-12705254 Msa0315960:intron 30.0%
!!! TCTACAGTCACTTTTGAATT+AGG + chr2_4:12705353-12705372 Msa0315960:intron 30.0%
AAGTTCTTCCAACATATACT+TGG - chr2_4:12705487-12705506 None:intergenic 30.0%
AGAACTTCTAACTTGAATGA+AGG + chr2_4:12705500-12705519 Msa0315960:intron 30.0%
GTTGCTATGGTTTCAATATA+TGG + chr2_4:12705522-12705541 Msa0315960:intron 30.0%
ACTGAATCAAGAATAACAAG+TGG - chr2_4:12705565-12705584 None:intergenic 30.0%
! CTCTTGATTTTGAACCATAT+TGG + chr2_4:12705588-12705607 Msa0315960:intron 30.0%
CATGTTTATAATGCATGTGA+TGG - chr2_4:12705702-12705721 None:intergenic 30.0%
CATCACATGCATTATAAACA+TGG + chr2_4:12705700-12705719 Msa0315960:intron 30.0%
GTCGAAATTATCTTCTTGTT+AGG + chr2_4:12705836-12705855 Msa0315960:intron 30.0%
ACGAGTTCATAGATAATAGA+AGG + chr2_4:12706166-12706185 Msa0315960:intron 30.0%
CGAGTTCATAGATAATAGAA+GGG + chr2_4:12706167-12706186 Msa0315960:intron 30.0%
GTATGCATCATTCATTGTAA+AGG + chr2_4:12706745-12706764 Msa0315960:intron 30.0%
AACTAATTTGAGAGATCATG+CGG - chr2_4:12706800-12706819 None:intergenic 30.0%
!!! AATTAGTTTTACCTGTGTTC+TGG + chr2_4:12706812-12706831 Msa0315960:intron 30.0%
CAAAATAGAACCACAGTTTA+TGG + chr2_4:12706884-12706903 Msa0315960:intron 30.0%
! GAAGTTGCAATTAGTTTGAT+TGG + chr2_4:12706910-12706929 Msa0315960:intron 30.0%
!! TCTGTCTAACTACTTTTATC+TGG - chr2_4:12707406-12707425 None:intergenic 30.0%
! CCTGGAATAAATGCATTTTA+CGG + chr2_4:12707633-12707652 Msa0315960:intron 30.0%
! ATAAATGCATTTTACGGTCT+TGG + chr2_4:12707639-12707658 Msa0315960:intron 30.0%
ATGCAATTCAACTTAACATG+GGG - chr2_4:12708492-12708511 None:intergenic 30.0%
CATGCAATTCAACTTAACAT+GGG - chr2_4:12708493-12708512 None:intergenic 30.0%
TCATGCAATTCAACTTAACA+TGG - chr2_4:12708494-12708513 None:intergenic 30.0%
TTGACTACAGTTAACGAAAA+GGG - chr2_4:12708595-12708614 None:intergenic 30.0%
ATTGACTACAGTTAACGAAA+AGG - chr2_4:12708596-12708615 None:intergenic 30.0%
! AAACAGAAAAGAGTACGACT+CGG - chr2_4:12701680-12701699 None:intergenic 35.0%
AACGGTGCAAATAACAAGAT+GGG - chr2_4:12701783-12701802 None:intergenic 35.0%
AAACGGTGCAAATAACAAGA+TGG - chr2_4:12701784-12701803 None:intergenic 35.0%
TCAACCTTATCACACTCAAA+TGG + chr2_4:12701809-12701828 Msa0315960:exon 35.0%
CAACCTTATCACACTCAAAT+GGG + chr2_4:12701810-12701829 Msa0315960:exon 35.0%
ATACCCATTTGAGTGTGATA+AGG - chr2_4:12701816-12701835 None:intergenic 35.0%
TCTGTTGAGTAATAGTAAGG+TGG - chr2_4:12701921-12701940 None:intergenic 35.0%
GGTTCTGTTGAGTAATAGTA+AGG - chr2_4:12701924-12701943 None:intergenic 35.0%
TAGTAGTAACTTTGTTGAGG+TGG - chr2_4:12701966-12701985 None:intergenic 35.0%
GGATAGTAGTAACTTTGTTG+AGG - chr2_4:12701969-12701988 None:intergenic 35.0%
TTGGAGAAGTAGAATGAATG+GGG - chr2_4:12702032-12702051 None:intergenic 35.0%
GTTGGAGAAGTAGAATGAAT+GGG - chr2_4:12702033-12702052 None:intergenic 35.0%
AGGATAGTTATTGTTAGGGT+TGG - chr2_4:12702051-12702070 None:intergenic 35.0%
TGGGAGGATAGTTATTGTTA+GGG - chr2_4:12702055-12702074 None:intergenic 35.0%
TTGGGAGGATAGTTATTGTT+AGG - chr2_4:12702056-12702075 None:intergenic 35.0%
! GTTTGATGATCAACATAAGG+AGG - chr2_4:12702203-12702222 None:intergenic 35.0%
! GCAGTTTGATGATCAACATA+AGG - chr2_4:12702206-12702225 None:intergenic 35.0%
TTAGTGTATGTTTGGATCTG+CGG + chr2_4:12702450-12702469 Msa0315960:intron 35.0%
GTAATCAATTATACACCTGG+CGG + chr2_4:12702661-12702680 Msa0315960:intron 35.0%
! ATTGACATGTTTCTAAGCAG+TGG + chr2_4:12702961-12702980 Msa0315960:intron 35.0%
TTTGCTTGATTGCATAGTAG+GGG + chr2_4:12703080-12703099 Msa0315960:intron 35.0%
TGCAAAAAAAGTTTCTCGCA+GGG - chr2_4:12703120-12703139 None:intergenic 35.0%
ATACTACTTAGAAACAGTGG+CGG - chr2_4:12703330-12703349 None:intergenic 35.0%
AGTGTGTAGCTTAGTGTTAT+AGG + chr2_4:12703410-12703429 Msa0315960:intron 35.0%
AGCTTAGTGTTATAGGATAC+TGG + chr2_4:12703417-12703436 Msa0315960:intron 35.0%
TGGAATGTATTGTAATGCAC+AGG + chr2_4:12703608-12703627 Msa0315960:intron 35.0%
GGAATGTATTGTAATGCACA+GGG + chr2_4:12703609-12703628 Msa0315960:intron 35.0%
GAATGTATTGTAATGCACAG+GGG + chr2_4:12703610-12703629 Msa0315960:intron 35.0%
AACTATCATGAAAGACCTAG+AGG - chr2_4:12703917-12703936 None:intergenic 35.0%
AGTTTCTCCAATAGGTTTCT+TGG + chr2_4:12703933-12703952 Msa0315960:intron 35.0%
AGGAAAACCAAGAAACCTAT+TGG - chr2_4:12703943-12703962 None:intergenic 35.0%
ATAGTCATTGCTATAGGCAA+AGG - chr2_4:12703963-12703982 None:intergenic 35.0%
TCTCCTTTCTATAGAATCCA+TGG + chr2_4:12703999-12704018 Msa0315960:intron 35.0%
CTCCTTTCTATAGAATCCAT+GGG + chr2_4:12704000-12704019 Msa0315960:intron 35.0%
ATAGTGTTAAGAGAGAGTTG+GGG - chr2_4:12704069-12704088 None:intergenic 35.0%
GATAGTGTTAAGAGAGAGTT+GGG - chr2_4:12704070-12704089 None:intergenic 35.0%
! TGATAGTGTTAAGAGAGAGT+TGG - chr2_4:12704071-12704090 None:intergenic 35.0%
GTATGAGACAAATTGTTGTG+TGG - chr2_4:12704183-12704202 None:intergenic 35.0%
ACACACACACACAAAAGAAA+GGG - chr2_4:12704282-12704301 None:intergenic 35.0%
AACACACACACACAAAAGAA+AGG - chr2_4:12704283-12704302 None:intergenic 35.0%
ATGCATTATGCAGAACAAAC+AGG + chr2_4:12704321-12704340 Msa0315960:intron 35.0%
ATTATGCAGAACAAACAGGA+AGG + chr2_4:12704325-12704344 Msa0315960:intron 35.0%
TGATAGTCTCTTAAGGTTAG+TGG - chr2_4:12704425-12704444 None:intergenic 35.0%
!! ATGGCTTTGATAGTCTCTTA+AGG - chr2_4:12704432-12704451 None:intergenic 35.0%
TTCGTGTGTTAAGAAATGTG+AGG + chr2_4:12704515-12704534 Msa0315960:intron 35.0%
! CAGGGAACTTTTGAATTACA+TGG - chr2_4:12704712-12704731 None:intergenic 35.0%
TAGAGATCTCAGGTATTAAG+TGG - chr2_4:12704758-12704777 None:intergenic 35.0%
! TCTAGAGCAACTTGCATAAT+AGG + chr2_4:12704774-12704793 Msa0315960:intron 35.0%
AGCATAAGAGTAAATGTGGT+CGG - chr2_4:12704950-12704969 None:intergenic 35.0%
! CAGAAGCATAAGAGTAAATG+TGG - chr2_4:12704954-12704973 None:intergenic 35.0%
GCAAATGTGATATTCTCTCT+CGG + chr2_4:12704973-12704992 Msa0315960:intron 35.0%
! TAAAGTGGTTAGTTAATGGC+AGG + chr2_4:12705239-12705258 Msa0315960:intron 35.0%
! AAAGTGGTTAGTTAATGGCA+GGG + chr2_4:12705240-12705259 Msa0315960:intron 35.0%
ATCATCCTATTGTTAGAGGA+GGG - chr2_4:12705270-12705289 None:intergenic 35.0%
GAGTTTGAAAGTTCCTTAGT+AGG + chr2_4:12705437-12705456 Msa0315960:intron 35.0%
ATATCACGAAACTCCTACTA+AGG - chr2_4:12705453-12705472 None:intergenic 35.0%
AACTTGAATGAAGGTTGCTA+TGG + chr2_4:12705509-12705528 Msa0315960:intron 35.0%
GACTTATGAGTCTACCAATA+TGG - chr2_4:12705605-12705624 None:intergenic 35.0%
!!! CATGGTTTTATTCTTGTGAG+AGG + chr2_4:12705718-12705737 Msa0315960:intron 35.0%
TCCACTGCTGTTAGAATTAT+TGG + chr2_4:12705887-12705906 Msa0315960:intron 35.0%
ACCAATAATTCTAACAGCAG+TGG - chr2_4:12705891-12705910 None:intergenic 35.0%
AAAACTAGTACCCATTGTGT+TGG + chr2_4:12706062-12706081 Msa0315960:intron 35.0%
TATCTTACCACCAACACAAT+GGG - chr2_4:12706075-12706094 None:intergenic 35.0%
TATGGCTACATTTAGACGTA+TGG - chr2_4:12706709-12706728 None:intergenic 35.0%
ACGTCTAAATGTAGCCATAT+TGG + chr2_4:12706710-12706729 Msa0315960:intron 35.0%
CAACTTCAATCCATAAACTG+TGG - chr2_4:12706897-12706916 None:intergenic 35.0%
AAAATGAGACCGTTTGAAGA+TGG + chr2_4:12706963-12706982 Msa0315960:intron 35.0%
! TACTGTCTTTTACTTTGCGA+AGG + chr2_4:12707061-12707080 Msa0315960:CDS 35.0%
CGAAGGAAGAAGATAAATGT+AGG + chr2_4:12707078-12707097 Msa0315960:CDS 35.0%
AATATGCGCTGAAACATGTT+TGG + chr2_4:12707265-12707284 Msa0315960:CDS 35.0%
! TTGAGTAATTTGCATGTGAG+GGG - chr2_4:12707348-12707367 None:intergenic 35.0%
! CTTGAGTAATTTGCATGTGA+GGG - chr2_4:12707349-12707368 None:intergenic 35.0%
AAGTAGTTAGACAGATTCTG+TGG + chr2_4:12707411-12707430 Msa0315960:CDS 35.0%
AATATGCATGACTGAACCAA+AGG + chr2_4:12707529-12707548 Msa0315960:CDS 35.0%
AATCTTACCATATGTCGACA+AGG - chr2_4:12707569-12707588 None:intergenic 35.0%
CTACGTACACATATATAGAG+TGG + chr2_4:12707599-12707618 Msa0315960:intron 35.0%
AGAGTGGATAATCAATTACC+TGG + chr2_4:12707615-12707634 Msa0315960:intron 35.0%
CCGTAAAATGCATTTATTCC+AGG - chr2_4:12707636-12707655 None:intergenic 35.0%
TGTTATAGCAGAGCAGAATT+TGG + chr2_4:12707749-12707768 Msa0315960:intron 35.0%
TTAGTGTTGTCATTCGCATA+TGG - chr2_4:12707880-12707899 None:intergenic 35.0%
!! TTTGTTTTCTTCATCTCCTG+CGG + chr2_4:12708035-12708054 Msa0315960:intron 35.0%
ATCTCCATAAGTTCCTCAAT+TGG - chr2_4:12708431-12708450 None:intergenic 35.0%
TTACTGCAGACATGTAAAAG+GGG - chr2_4:12708555-12708574 None:intergenic 35.0%
CTTACTGCAGACATGTAAAA+GGG - chr2_4:12708556-12708575 None:intergenic 35.0%
GTCTGCAGTAAGGTAATATA+TGG + chr2_4:12708564-12708583 Msa0315960:three_prime_UTR 35.0%
CTATACAGTATAGATGACAC+GGG - chr2_4:12708698-12708717 None:intergenic 35.0%
CCTATACAGTATAGATGACA+CGG - chr2_4:12708699-12708718 None:intergenic 35.0%
AAATATAATGACACCTGGCT+TGG + chr2_4:12708793-12708812 Msa0315960:three_prime_UTR 35.0%
AAATAACAAGATGGGAGTGG+TGG - chr2_4:12701775-12701794 None:intergenic 40.0%
TGCAAATAACAAGATGGGAG+TGG - chr2_4:12701778-12701797 None:intergenic 40.0%
ACACTCAAATGGGTATTACG+TGG + chr2_4:12701820-12701839 Msa0315960:exon 40.0%
GTTGAGTAATAGTAAGGTGG+TGG - chr2_4:12701918-12701937 None:intergenic 40.0%
TAGTAACTTTGTTGAGGTGG+TGG - chr2_4:12701963-12701982 None:intergenic 40.0%
GGTTGGAGAAGTAGAATGAA+TGG - chr2_4:12702034-12702053 None:intergenic 40.0%
AACAACAACCGCAATATGCA+TGG + chr2_4:12702126-12702145 Msa0315960:CDS 40.0%
TGATGATCAACATAAGGAGG+TGG - chr2_4:12702200-12702219 None:intergenic 40.0%
GGTTAAGCTGATCAATCTCA+AGG - chr2_4:12702274-12702293 None:intergenic 40.0%
GACTTACCTTCCATCAAAGA+CGG - chr2_4:12702330-12702349 None:intergenic 40.0%
! ATGTTTGGTTTCCCTTCTAG+TGG - chr2_4:12702693-12702712 None:intergenic 40.0%
TTGTAACCCTTGTGATGTGA+TGG + chr2_4:12702932-12702951 Msa0315960:intron 40.0%
TCTTCTCCATCACATCACAA+GGG - chr2_4:12702941-12702960 None:intergenic 40.0%
TTCTTCTCCATCACATCACA+AGG - chr2_4:12702942-12702961 None:intergenic 40.0%
TTGCTTGATTGCATAGTAGG+GGG + chr2_4:12703081-12703100 Msa0315960:intron 40.0%
GTGCAAAAAAAGTTTCTCGC+AGG - chr2_4:12703121-12703140 None:intergenic 40.0%
!!! CAACTTTTGTACTGGTTCAG+TGG - chr2_4:12703585-12703604 None:intergenic 40.0%
CACTGAACCAGTACAAAAGT+TGG + chr2_4:12703583-12703602 Msa0315960:intron 40.0%
!! AACCAGTACAAAAGTTGGTG+TGG + chr2_4:12703588-12703607 Msa0315960:intron 40.0%
! TTCCACACCAACTTTTGTAC+TGG - chr2_4:12703593-12703612 None:intergenic 40.0%
!! TAGACAAGCCTTATTCCACT+AGG + chr2_4:12703821-12703840 Msa0315960:intron 40.0%
TATCCAAACCATTGACCTCT+AGG + chr2_4:12703899-12703918 Msa0315960:intron 40.0%
ATGAAAGACCTAGAGGTCAA+TGG - chr2_4:12703910-12703929 None:intergenic 40.0%
TCGAGGATAGTCATTGCTAT+AGG - chr2_4:12703969-12703988 None:intergenic 40.0%
GACCCATGGATTCTATAGAA+AGG - chr2_4:12704005-12704024 None:intergenic 40.0%
AGTATATTGTAGGAGACCCA+TGG - chr2_4:12704019-12704038 None:intergenic 40.0%
GCAGGATGTCTGAAAATACT+AGG - chr2_4:12704109-12704128 None:intergenic 40.0%
CACACACACACAAAAGAAAG+GGG - chr2_4:12704281-12704300 None:intergenic 40.0%
GATCATCCTATTGTTAGAGG+AGG - chr2_4:12705271-12705290 None:intergenic 40.0%
CTGGATCATCCTATTGTTAG+AGG - chr2_4:12705274-12705293 None:intergenic 40.0%
AGACACAACTGTCTATCAGT+TGG - chr2_4:12705637-12705656 None:intergenic 40.0%
! AATGCATGTGATGGAAAAGC+CGG - chr2_4:12705693-12705712 None:intergenic 40.0%
TTTAGACGTCAGCAACGTAA+AGG - chr2_4:12705976-12705995 None:intergenic 40.0%
CTATCTTACCACCAACACAA+TGG - chr2_4:12706076-12706095 None:intergenic 40.0%
GGCTAAAAAGTTAGAGAGTC+TGG - chr2_4:12706138-12706157 None:intergenic 40.0%
CAGATGTGAAATCACAAGAG+AGG + chr2_4:12706489-12706508 Msa0315960:intron 40.0%
GAAATCACAAGAGAGGTGAA+TGG + chr2_4:12706496-12706515 Msa0315960:intron 40.0%
GAGAGGTGAATGGTAAAATG+AGG + chr2_4:12706506-12706525 Msa0315960:intron 40.0%
GCTACATTTAGACGTATGGA+CGG - chr2_4:12706705-12706724 None:intergenic 40.0%
ACAAATGCATCAGGAAAGAG+TGG - chr2_4:12707110-12707129 None:intergenic 40.0%
TTGACTGGTACAAATGCATC+AGG - chr2_4:12707119-12707138 None:intergenic 40.0%
TTCTTAAAGGGGACTTTGAC+TGG - chr2_4:12707134-12707153 None:intergenic 40.0%
! GTCAAAGTCCCCTTTAAGAA+AGG + chr2_4:12707134-12707153 Msa0315960:CDS 40.0%
TGGCCAACTCCTTTCTTAAA+GGG - chr2_4:12707146-12707165 None:intergenic 40.0%
CATCTAACTCAAAGAAGCCT+AGG - chr2_4:12707202-12707221 None:intergenic 40.0%
ATCTTTCAAAGCCTTCACCT+GGG + chr2_4:12707222-12707241 Msa0315960:CDS 40.0%
GTTTCAGCGCATATTACAAG+AGG - chr2_4:12707260-12707279 None:intergenic 40.0%
AACATGTTTGGAAACTCCCT+CGG + chr2_4:12707277-12707296 Msa0315960:CDS 40.0%
! TTAGGAGTTTCGTTTTCCGA+GGG - chr2_4:12707296-12707315 None:intergenic 40.0%
! TTTAGGAGTTTCGTTTTCCG+AGG - chr2_4:12707297-12707316 None:intergenic 40.0%
! ACGGAATCATCAGGAGTTTT+AGG - chr2_4:12707314-12707333 None:intergenic 40.0%
! GCTTGAGTAATTTGCATGTG+AGG - chr2_4:12707350-12707369 None:intergenic 40.0%
GCAAATTACTCAAGCTGTCT+TGG + chr2_4:12707355-12707374 Msa0315960:CDS 40.0%
GCTGTCTTGGAGAAAAGTAA+TGG + chr2_4:12707368-12707387 Msa0315960:CDS 40.0%
GTCTTGGAGAAAAGTAATGG+TGG + chr2_4:12707371-12707390 Msa0315960:CDS 40.0%
TTGGAGAAAAGTAATGGTGG+TGG + chr2_4:12707374-12707393 Msa0315960:CDS 40.0%
! AGACAGATTCTGTGGATTGA+TGG + chr2_4:12707419-12707438 Msa0315960:CDS 40.0%
TGTCTTACCTTGTCGACATA+TGG + chr2_4:12707559-12707578 Msa0315960:CDS 40.0%
CTGATGTAGCATCAGTTGTA+TGG + chr2_4:12707916-12707935 Msa0315960:intron 40.0%
TGTAGCATCAGTTGTATGGA+TGG + chr2_4:12707920-12707939 Msa0315960:intron 40.0%
GTAGCATCAGTTGTATGGAT+GGG + chr2_4:12707921-12707940 Msa0315960:intron 40.0%
ATGTCAGAACTTATAGACCG+TGG + chr2_4:12708172-12708191 Msa0315960:intron 40.0%
ACTTATAGACCGTGGAAAAG+TGG + chr2_4:12708180-12708199 Msa0315960:intron 40.0%
!! GACACTTAACCACTTTTCCA+CGG - chr2_4:12708192-12708211 None:intergenic 40.0%
! AGTGTCACTCTATATTCCAC+TGG + chr2_4:12708206-12708225 Msa0315960:intron 40.0%
! ACGGCATATAGGGCATTTAT+TGG - chr2_4:12708405-12708424 None:intergenic 40.0%
TAAGTTCCTCAATTGGCTGA+CGG - chr2_4:12708424-12708443 None:intergenic 40.0%
TCAGCCAATTGAGGAACTTA+TGG + chr2_4:12708424-12708443 Msa0315960:CDS 40.0%
TTGAGGAACTTATGGAGATC+AGG + chr2_4:12708432-12708451 Msa0315960:CDS 40.0%
TGAGGAACTTATGGAGATCA+GGG + chr2_4:12708433-12708452 Msa0315960:CDS 40.0%
TACTGCAGACATGTAAAAGG+GGG - chr2_4:12708554-12708573 None:intergenic 40.0%
CCTTACTGCAGACATGTAAA+AGG - chr2_4:12708557-12708576 None:intergenic 40.0%
! CCTTTTACATGTCTGCAGTA+AGG + chr2_4:12708554-12708573 Msa0315960:three_prime_UTR 40.0%
TACGTGTTTGAGGGAAGATT+TGG + chr2_4:12708639-12708658 Msa0315960:three_prime_UTR 40.0%
! AACCACTGCAAAAGTGTACA+TGG - chr2_4:12708665-12708684 None:intergenic 40.0%
CCGTGTCATCTATACTGTAT+AGG + chr2_4:12708696-12708715 Msa0315960:three_prime_UTR 40.0%
!! TAATAGTAAGGTGGTGGTGG+CGG - chr2_4:12701912-12701931 None:intergenic 45.0%
! GAGTAATAGTAAGGTGGTGG+TGG - chr2_4:12701915-12701934 None:intergenic 45.0%
! TAACTTTGTTGAGGTGGTGG+TGG - chr2_4:12701960-12701979 None:intergenic 45.0%
AAGTAGAATGAATGGGGCTG+TGG - chr2_4:12702026-12702045 None:intergenic 45.0%
! CGATTGGTAGTAGAATTGGG+AGG - chr2_4:12702071-12702090 None:intergenic 45.0%
ATCAACATAAGGAGGTGGAG+TGG - chr2_4:12702195-12702214 None:intergenic 45.0%
! GTTTTCGATGCCGTCTTTGA+TGG + chr2_4:12702317-12702336 Msa0315960:CDS 45.0%
GTAGGATCAGTTCTACTCGA+AGG + chr2_4:12702624-12702643 Msa0315960:intron 45.0%
! GACATGTTTCTAAGCAGTGG+CGG + chr2_4:12702964-12702983 Msa0315960:intron 45.0%
TCATGTTTACGTTGGTGCAG+TGG - chr2_4:12703232-12703251 None:intergenic 45.0%
TGTATTGTAATGCACAGGGG+TGG + chr2_4:12703613-12703632 Msa0315960:intron 45.0%
GTATTGTAATGCACAGGGGT+GGG + chr2_4:12703614-12703633 Msa0315960:intron 45.0%
TATTGTAATGCACAGGGGTG+GGG + chr2_4:12703615-12703634 Msa0315960:intron 45.0%
!! CAAGCCTTATTCCACTAGGT+CGG + chr2_4:12703825-12703844 Msa0315960:intron 45.0%
TTGACCGACCTAGTGGAATA+AGG - chr2_4:12703832-12703851 None:intergenic 45.0%
AGACCTAGAGGTCAATGGTT+TGG - chr2_4:12703905-12703924 None:intergenic 45.0%
AAGGAGAATACATCAGGTCG+AGG - chr2_4:12703986-12704005 None:intergenic 45.0%
CAGTGATGAAAATGCTACGC+AGG - chr2_4:12704127-12704146 None:intergenic 45.0%
TGGCTGTACATTTGGTACCT+CGG - chr2_4:12704470-12704489 None:intergenic 45.0%
!! TTTTACCCAAACCTGACTCG+TGG - chr2_4:12704490-12704509 None:intergenic 45.0%
! TTAACACTGGAAAGGGGTGT+CGG - chr2_4:12704555-12704574 None:intergenic 45.0%
TCAGAGTGGGGATTATAAGC+AGG + chr2_4:12704599-12704618 Msa0315960:intron 45.0%
CAGAGTGGGGATTATAAGCA+GGG + chr2_4:12704600-12704619 Msa0315960:intron 45.0%
AAGCAGGGAAACACATGATC+TGG + chr2_4:12704615-12704634 Msa0315960:intron 45.0%
AGCAGGGAAACACATGATCT+GGG + chr2_4:12704616-12704635 Msa0315960:intron 45.0%
! GGAAACACATGATCTGGGAT+TGG + chr2_4:12704621-12704640 Msa0315960:intron 45.0%
CAAAAGTTCCCTGCTGATGA+TGG + chr2_4:12704719-12704738 Msa0315960:intron 45.0%
AAAACCCTCCATCATCAGCA+GGG - chr2_4:12704730-12704749 None:intergenic 45.0%
TAAAACCCTCCATCATCAGC+AGG - chr2_4:12704731-12704750 None:intergenic 45.0%
!! CAAGTTGCTCTAGAGATCTC+AGG - chr2_4:12704768-12704787 None:intergenic 45.0%
GACTTCCCTCCTCTAACAAT+AGG + chr2_4:12705262-12705281 Msa0315960:intron 45.0%
ACCCCTCTAACATATCCGTA+AGG + chr2_4:12705294-12705313 Msa0315960:intron 45.0%
CCCTTACGGATATGTTAGAG+GGG - chr2_4:12705298-12705317 None:intergenic 45.0%
CCCCTCTAACATATCCGTAA+GGG + chr2_4:12705295-12705314 Msa0315960:intron 45.0%
CCCCTTACGGATATGTTAGA+GGG - chr2_4:12705299-12705318 None:intergenic 45.0%
CCCTCTAACATATCCGTAAG+GGG + chr2_4:12705296-12705315 Msa0315960:intron 45.0%
!! TGGACTCTGAGATAACTCGT+TGG + chr2_4:12705775-12705794 Msa0315960:intron 45.0%
TACGTTGCTGACGTCTAAAC+AGG + chr2_4:12705977-12705996 Msa0315960:intron 45.0%
ACTAGTACCCATTGTGTTGG+TGG + chr2_4:12706065-12706084 Msa0315960:intron 45.0%
ACAAAATGCACGGCAGAGAA+AGG + chr2_4:12706207-12706226 Msa0315960:intron 45.0%
CAAAATGCACGGCAGAGAAA+GGG + chr2_4:12706208-12706227 Msa0315960:intron 45.0%
AAAATGCACGGCAGAGAAAG+GGG + chr2_4:12706209-12706228 Msa0315960:intron 45.0%
ACTTCTCATAGCCAGAACAC+AGG - chr2_4:12706826-12706845 None:intergenic 45.0%
! GTCCCCTTTAAGAAAGGAGT+TGG + chr2_4:12707140-12707159 Msa0315960:CDS 45.0%
GGCCAACTCCTTTCTTAAAG+GGG - chr2_4:12707145-12707164 None:intergenic 45.0%
CTGGCCAACTCCTTTCTTAA+AGG - chr2_4:12707147-12707166 None:intergenic 45.0%
CTGAAGGCTGAGCAAATTTC+TGG - chr2_4:12707166-12707185 None:intergenic 45.0%
! CAGAAATTTGCTCAGCCTTC+AGG + chr2_4:12707164-12707183 Msa0315960:CDS 45.0%
GATCTTTCAAAGCCTTCACC+TGG + chr2_4:12707221-12707240 Msa0315960:CDS 45.0%
TCTTTCAAAGCCTTCACCTG+GGG + chr2_4:12707223-12707242 Msa0315960:CDS 45.0%
! GCTTTGATGACAGTGATCCT+GGG + chr2_4:12707495-12707514 Msa0315960:CDS 45.0%
CATATTACACACTCCTTCCC+AGG - chr2_4:12707515-12707534 None:intergenic 45.0%
GGTAAGACAGCTGTATCCTT+TGG - chr2_4:12707548-12707567 None:intergenic 45.0%
! CTCTATATTCCACTGGCTAG+TGG + chr2_4:12708213-12708232 Msa0315960:intron 45.0%
CAATTGGCTGACGGCATATA+GGG - chr2_4:12708415-12708434 None:intergenic 45.0%
TCAATTGGCTGACGGCATAT+AGG - chr2_4:12708416-12708435 None:intergenic 45.0%
TATATGCCGTCAGCCAATTG+AGG + chr2_4:12708415-12708434 Msa0315960:CDS 45.0%
GGGGAGAGAAAAAACTGTCA+TGG - chr2_4:12708473-12708492 None:intergenic 45.0%
ACTGCAGACATGTAAAAGGG+GGG - chr2_4:12708553-12708572 None:intergenic 45.0%
GGGCGAAATATAATGACACC+TGG + chr2_4:12708788-12708807 Msa0315960:three_prime_UTR 45.0%
AATTCAATACGGACCAAGCC+AGG - chr2_4:12708809-12708828 None:intergenic 45.0%
!! AAATATAATAATATTCATTA+TGG + chr2_4:12707685-12707704 Msa0315960:intron 5.0%
! CAGAAAAGAGTACGACTCGG+TGG - chr2_4:12701677-12701696 None:intergenic 50.0%
!! TGGTGGTGGGTGAGAAATCA+CGG - chr2_4:12701746-12701765 None:intergenic 50.0%
TAACAAGATGGGAGTGGTGG+TGG - chr2_4:12701772-12701791 None:intergenic 50.0%
GTGTAAGGAGTAGTTGAGGG+GGG - chr2_4:12701990-12702009 None:intergenic 50.0%
GGTGTAAGGAGTAGTTGAGG+GGG - chr2_4:12701991-12702010 None:intergenic 50.0%
GGGTGTAAGGAGTAGTTGAG+GGG - chr2_4:12701992-12702011 None:intergenic 50.0%
GGGGTGTAAGGAGTAGTTGA+GGG - chr2_4:12701993-12702012 None:intergenic 50.0%
TGGGGTGTAAGGAGTAGTTG+AGG - chr2_4:12701994-12702013 None:intergenic 50.0%
AATGAATGGGGCTGTGGTTG+AGG - chr2_4:12702020-12702039 None:intergenic 50.0%
! AGCAGCAGGAGCGTAAAAAG+GGG - chr2_4:12702165-12702184 None:intergenic 50.0%
! CAGCAGCAGGAGCGTAAAAA+GGG - chr2_4:12702166-12702185 None:intergenic 50.0%
TCGATGCCGTCTTTGATGGA+AGG + chr2_4:12702321-12702340 Msa0315960:CDS 50.0%
CTGGACACATGGTGCATGTT+TGG - chr2_4:12702708-12702727 None:intergenic 50.0%
!! TAGAAACCTTGGGGGTACCA+TGG + chr2_4:12703281-12703300 Msa0315960:intron 50.0%
!! AACAGTGGCGGATCTTCCTT+GGG - chr2_4:12703318-12703337 None:intergenic 50.0%
!! AAACAGTGGCGGATCTTCCT+TGG - chr2_4:12703319-12703338 None:intergenic 50.0%
CATGTAGTTGACCGACCTAG+TGG - chr2_4:12703839-12703858 None:intergenic 50.0%
CACTAGGTCGGTCAACTACA+TGG + chr2_4:12703837-12703856 Msa0315960:intron 50.0%
TCGGAGAACGACTTTGGACA+TGG - chr2_4:12704451-12704470 None:intergenic 50.0%
ATGTCCAAAGTCGTTCTCCG+AGG + chr2_4:12704450-12704469 Msa0315960:intron 50.0%
! CTGACTCGTGGCTGTACATT+TGG - chr2_4:12704478-12704497 None:intergenic 50.0%
CAAATGTACAGCCACGAGTC+AGG + chr2_4:12704476-12704495 Msa0315960:intron 50.0%
TACAGCCACGAGTCAGGTTT+GGG + chr2_4:12704482-12704501 Msa0315960:intron 50.0%
! ACACATGATCTGGGATTGGC+TGG + chr2_4:12704625-12704644 Msa0315960:intron 50.0%
!! AAGTTCCCTGCTGATGATGG+AGG + chr2_4:12704722-12704741 Msa0315960:intron 50.0%
!! AGTTCCCTGCTGATGATGGA+GGG + chr2_4:12704723-12704742 Msa0315960:intron 50.0%
ACGGATATGTTAGAGGGGTC+TGG - chr2_4:12705293-12705312 None:intergenic 50.0%
GCCCCTTACGGATATGTTAG+AGG - chr2_4:12705300-12705319 None:intergenic 50.0%
AACATATCCGTAAGGGGCTG+AGG + chr2_4:12705302-12705321 Msa0315960:intron 50.0%
CTTGCACCTAGAAGCTTCTC+CGG + chr2_4:12705671-12705690 Msa0315960:intron 50.0%
GAAAAGCCGGAGAAGCTTCT+AGG - chr2_4:12705680-12705699 None:intergenic 50.0%
TGCTGACGTCTAAACAGGCA+CGG + chr2_4:12705982-12706001 Msa0315960:intron 50.0%
ACCCAGGTAGAGCTTTCTGT+GGG + chr2_4:12706005-12706024 Msa0315960:intron 50.0%
TTTGCTCAGCCTTCAGGAAC+AGG + chr2_4:12707170-12707189 Msa0315960:CDS 50.0%
TTGCTCAGCCTTCAGGAACA+GGG + chr2_4:12707171-12707190 Msa0315960:CDS 50.0%
AGGTCAATCCCTGTTCCTGA+AGG - chr2_4:12707182-12707201 None:intergenic 50.0%
TCAGGAACAGGGATTGACCT+AGG + chr2_4:12707182-12707201 Msa0315960:CDS 50.0%
AAGACATCTTCCCCAGGTGA+AGG - chr2_4:12707236-12707255 None:intergenic 50.0%
AGAGGAAAGACATCTTCCCC+AGG - chr2_4:12707242-12707261 None:intergenic 50.0%
GCATCTAGCACGGAATCATC+AGG - chr2_4:12707323-12707342 None:intergenic 50.0%
ATAGGAAGCTCAGAAGCTGC+AGG + chr2_4:12707473-12707492 Msa0315960:CDS 50.0%
! GGCTTTGATGACAGTGATCC+TGG + chr2_4:12707494-12707513 Msa0315960:CDS 50.0%
TGATGACAGTGATCCTGGGA+AGG + chr2_4:12707499-12707518 Msa0315960:CDS 50.0%
TAGTATTCGCCACTAGCCAG+TGG - chr2_4:12708225-12708244 None:intergenic 50.0%
GTGAGTGTGCAAAAGCTCTG+CGG + chr2_4:12708372-12708391 Msa0315960:CDS 50.0%
CTGCAGACATGTAAAAGGGG+GGG - chr2_4:12708552-12708571 None:intergenic 50.0%
TTTGGGTGCGTACGTGTTTG+AGG + chr2_4:12708629-12708648 Msa0315960:three_prime_UTR 50.0%
TTGGGTGCGTACGTGTTTGA+GGG + chr2_4:12708630-12708649 Msa0315960:three_prime_UTR 50.0%
! GGCCATGTACACTTTTGCAG+TGG + chr2_4:12708660-12708679 Msa0315960:three_prime_UTR 50.0%
! TGGTGGGTGAGAAATCACGG+CGG - chr2_4:12701743-12701762 None:intergenic 55.0%
GTTGTGGTGGTTGTGGAGGT+GGG - chr2_4:12701878-12701897 None:intergenic 55.0%
AGTTGTGGTGGTTGTGGAGG+TGG - chr2_4:12701879-12701898 None:intergenic 55.0%
GGAAGTTGTGGTGGTTGTGG+AGG - chr2_4:12701882-12701901 None:intergenic 55.0%
GGTGGAAGTTGTGGTGGTTG+TGG - chr2_4:12701885-12701904 None:intergenic 55.0%
!! CTTTGTTGAGGTGGTGGTGG+TGG - chr2_4:12701957-12701976 None:intergenic 55.0%
GGTTGAGGTTGTGGGGTGTA+AGG - chr2_4:12702005-12702024 None:intergenic 55.0%
GGTGGAGGCCATGCATATTG+CGG - chr2_4:12702137-12702156 None:intergenic 55.0%
TAAAAAGGGGGAGGAGGTGG+AGG - chr2_4:12702152-12702171 None:intergenic 55.0%
! GCAGCAGGAGCGTAAAAAGG+GGG - chr2_4:12702164-12702183 None:intergenic 55.0%
! GCAGCAGCAGGAGCGTAAAA+AGG - chr2_4:12702167-12702186 None:intergenic 55.0%
GGTACCTCGGAGAACGACTT+TGG - chr2_4:12704457-12704476 None:intergenic 55.0%
GTACAGCCACGAGTCAGGTT+TGG + chr2_4:12704481-12704500 Msa0315960:intron 55.0%
AACAGCACCTCAGCCCCTTA+CGG - chr2_4:12705312-12705331 None:intergenic 55.0%
CGGAGAAGCTTCTAGGTGCA+AGG - chr2_4:12705673-12705692 None:intergenic 55.0%
GACCCAGGTAGAGCTTTCTG+TGG + chr2_4:12706004-12706023 Msa0315960:intron 55.0%
GCCCACAGAAAGCTCTACCT+GGG - chr2_4:12706009-12706028 None:intergenic 55.0%
GTAGAGCTTTCTGTGGGCCT+GGG + chr2_4:12706011-12706030 Msa0315960:intron 55.0%
TCCAAATTTAGCGAGGGCCC+AGG - chr2_4:12706031-12706050 None:intergenic 55.0%
GTGAGGGGATGCATCTAGCA+CGG - chr2_4:12707333-12707352 None:intergenic 55.0%
TCCCTAATGTTCGCCGAGCA+AGG + chr2_4:12708754-12708773 Msa0315960:three_prime_UTR 55.0%
CCCTTGCTCGGCGAACATTA+GGG - chr2_4:12708758-12708777 None:intergenic 55.0%
CCCTAATGTTCGCCGAGCAA+GGG + chr2_4:12708755-12708774 Msa0315960:three_prime_UTR 55.0%
TCCCTTGCTCGGCGAACATT+AGG - chr2_4:12708759-12708778 None:intergenic 55.0%
CCTTGTTCGCTTCCCTTGCT+CGG - chr2_4:12708770-12708789 None:intergenic 55.0%
CGAGCAAGGGAAGCGAACAA+GGG + chr2_4:12708768-12708787 Msa0315960:three_prime_UTR 55.0%
!! GTGGTGGTGGTTGTGGTGGT+GGG - chr2_4:12701759-12701778 None:intergenic 60.0%
!! AGTGGTGGTGGTTGTGGTGG+TGG - chr2_4:12701760-12701779 None:intergenic 60.0%
!! GATGGGAGTGGTGGTGGTTG+TGG - chr2_4:12701766-12701785 None:intergenic 60.0%
!! GGTGGTGGTGGAAGTTGTGG+TGG - chr2_4:12701891-12701910 None:intergenic 60.0%
!! TAGTAAGGTGGTGGTGGCGG+TGG - chr2_4:12701909-12701928 None:intergenic 60.0%
!! TGTTGAGGTGGTGGTGGTGG+TGG - chr2_4:12701954-12701973 None:intergenic 60.0%
GGGCTGTGGTTGAGGTTGTG+GGG - chr2_4:12702012-12702031 None:intergenic 60.0%
GGGGCTGTGGTTGAGGTTGT+GGG - chr2_4:12702013-12702032 None:intergenic 60.0%
TGGGGCTGTGGTTGAGGTTG+TGG - chr2_4:12702014-12702033 None:intergenic 60.0%
GCGTAAAAAGGGGGAGGAGG+TGG - chr2_4:12702155-12702174 None:intergenic 60.0%
GGAGCGTAAAAAGGGGGAGG+AGG - chr2_4:12702158-12702177 None:intergenic 60.0%
! GCAGGAGCGTAAAAAGGGGG+AGG - chr2_4:12702161-12702180 None:intergenic 60.0%
GGAGTGGAAGAAGCAGCAGC+AGG - chr2_4:12702179-12702198 None:intergenic 60.0%
! TTCTAGTGGTGCTAGCCGCC+AGG - chr2_4:12702679-12702698 None:intergenic 60.0%
TGGCGGCTAGCACCACTAGA+AGG + chr2_4:12702678-12702697 Msa0315960:intron 60.0%
GGCGGCTAGCACCACTAGAA+GGG + chr2_4:12702679-12702698 Msa0315960:intron 60.0%
TGGAAGCCATGGTACCCCCA+AGG - chr2_4:12703290-12703309 None:intergenic 60.0%
!! TGGGGGTACCATGGCTTCCA+TGG + chr2_4:12703290-12703309 Msa0315960:intron 60.0%
!! GGGGGTACCATGGCTTCCAT+GGG + chr2_4:12703291-12703310 Msa0315960:intron 60.0%
CTTGGGACCCATGGAAGCCA+TGG - chr2_4:12703301-12703320 None:intergenic 60.0%
CATGGCTTCCATGGGTCCCA+AGG + chr2_4:12703299-12703318 Msa0315960:intron 60.0%
CGGATCTTCCTTGGGACCCA+TGG - chr2_4:12703310-12703329 None:intergenic 60.0%
GTCTAAACAGGCACGGACCC+AGG + chr2_4:12705989-12706008 Msa0315960:intron 60.0%
GGCCCACAGAAAGCTCTACC+TGG - chr2_4:12706010-12706029 None:intergenic 60.0%
GGTAGAGCTTTCTGTGGGCC+TGG + chr2_4:12706010-12706029 Msa0315960:intron 60.0%
GCCTGGGCCCTCGCTAAATT+TGG + chr2_4:12706027-12706046 Msa0315960:intron 60.0%
CCGAGCAAGGGAAGCGAACA+AGG + chr2_4:12708767-12708786 Msa0315960:three_prime_UTR 60.0%
!! GGGAGTGGTGGTGGTTGTGG+TGG - chr2_4:12701763-12701782 None:intergenic 65.0%
!! GGCGGTGGTGGTGGAAGTTG+TGG - chr2_4:12701894-12701913 None:intergenic 65.0%
!! TAAGGTGGTGGTGGCGGTGG+TGG - chr2_4:12701906-12701925 None:intergenic 65.0%
!! GAGGTGGTGGTGGTGGTGGA+GGG - chr2_4:12701950-12701969 None:intergenic 65.0%
!! TGAGGTGGTGGTGGTGGTGG+AGG - chr2_4:12701951-12701970 None:intergenic 65.0%
!! GGTGGTGGTGGTGGAGGGTG+TGG - chr2_4:12701945-12701964 None:intergenic 70.0%
!! GGTGGTGGTGGCGGTGGTGG+TGG - chr2_4:12701903-12701922 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 12701669 12708862 12701669 ID=Msa0315960;Name=Msa0315960
chr2_4 mRNA 12701669 12708862 12701669 ID=Msa0315960-mRNA-1;Parent=Msa0315960;Name=Msa0315960-mRNA-1;_AED=0.03;_eAED=0.03;_QI=159|1|1|1|1|1|3|387|383
chr2_4 exon 12701669 12702342 12701669 ID=Msa0315960-mRNA-1:exon:4853;Parent=Msa0315960-mRNA-1
chr2_4 exon 12707058 12707580 12707058 ID=Msa0315960-mRNA-1:exon:4854;Parent=Msa0315960-mRNA-1
chr2_4 exon 12708362 12708862 12708362 ID=Msa0315960-mRNA-1:exon:4855;Parent=Msa0315960-mRNA-1
chr2_4 five_prime_UTR 12701669 12701827 12701669 ID=Msa0315960-mRNA-1:five_prime_utr;Parent=Msa0315960-mRNA-1
chr2_4 CDS 12701828 12702342 12701828 ID=Msa0315960-mRNA-1:cds;Parent=Msa0315960-mRNA-1
chr2_4 CDS 12707058 12707580 12707058 ID=Msa0315960-mRNA-1:cds;Parent=Msa0315960-mRNA-1
chr2_4 CDS 12708362 12708475 12708362 ID=Msa0315960-mRNA-1:cds;Parent=Msa0315960-mRNA-1
chr2_4 three_prime_UTR 12708476 12708862 12708476 ID=Msa0315960-mRNA-1:three_prime_utr;Parent=Msa0315960-mRNA-1
Gene Sequence

>Msa0315960

ATGGGTATTACGTGGAGTAACAGAAGAAGAAACAATTTCATTCAAAACCCACCTCCACAACCACCACAACTTCCACCACCACCGCCACCACCACCTTACTATTACTCAACAGAACCACACCCTCCACCACCACCACCACCTCAACAAAGTTACTACTATCCCCCCTCAACTACTCCTTACACCCCACAACCTCAACCACAGCCCCATTCATTCTACTTCTCCAACCCTAACAATAACTATCCTCCCAATTCTACTACCAATCGTATTCAATATCATCCTTCATATCATCTCAATCAACAACAACAACCGCAATATGCATGGCCTCCACCTCCTCCCCCTTTTTACGCTCCTGCTGCTGCTTCTTCCACTCCACCTCCTTATGTTGATCATCAAACTGCTAAAAAGATTAGAAACAATGTTAATGTTCATAAGGATACGCTTCGCCTTGAGATTGATCAGCTTAACCCTGATCATTACCTTGTTTCTTTTGTTTTCGATGCCGTCTTTGATGGAAGCATTACTGTCTTTTACTTTGCGAAGGAAGAAGATAAATGTAGGTTTGTTCCACTCTTTCCTGATGCATTTGTACCAGTCAAAGTCCCCTTTAAGAAAGGAGTTGGCCAGAAATTTGCTCAGCCTTCAGGAACAGGGATTGACCTAGGCTTCTTTGAGTTAGATGATCTTTCAAAGCCTTCACCTGGGGAAGATGTCTTTCCTCTTGTAATATGCGCTGAAACATGTTTGGAAACTCCCTCGGAAAACGAAACTCCTAAAACTCCTGATGATTCCGTGCTAGATGCATCCCCTCACATGCAAATTACTCAAGCTGTCTTGGAGAAAAGTAATGGTGGTGGTGCTTTCCAGATAAAAGTAGTTAGACAGATTCTGTGGATTGATGGTGTTCGTTATGAGTTAAGAGAACTATATGGAATAGGAAGCTCAGAAGCTGCAGGCTTTGATGACAGTGATCCTGGGAAGGAGTGTGTAATATGCATGACTGAACCAAAGGATACAGCTGTCTTACCTTGTCGACATATGTGTTTGTGCAGTGAGTGTGCAAAAGCTCTGCGGCTTCAATCCAATAAATGCCCTATATGCCGTCAGCCAATTGAGGAACTTATGGAGATCAGGGTGAAGAGTAGCGATCCATGA
Protein sequence

>Msa0315960

MGITWSNRRRNNFIQNPPPQPPQLPPPPPPPPYYYSTEPHPPPPPPPQQSYYYPPSTTPYTPQPQPQPHSFYFSNPNNNYPPNSTTNRIQYHPSYHLNQQQQPQYAWPPPPPPFYAPAAASSTPPPYVDHQTAKKIRNNVNVHKDTLRLEIDQLNPDHYLVSFVFDAVFDGSITVFYFAKEEDKCRFVPLFPDAFVPVKVPFKKGVGQKFAQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENETPKTPDDSVLDASPHMQITQAVLEKSNGGGAFQIKVVRQILWIDGVRYELRELYGIGSSEAAGFDDSDPGKECVICMTEPKDTAVLPCRHMCLCSECAKALRLQSNKCPICRQPIEELMEIRVKSSDP*