AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1220460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1220460 MtrunA17_Chr4g0071521 94.357 319 11 3 1 314 1 317 0.0 603
Msa1220460 MtrunA17_Chr1g0147881 49.570 349 96 10 1 299 1 319 2.12e-94 283
Msa1220460 MtrunA17_Chr4g0053281 42.169 332 139 12 15 310 20 334 5.37e-68 215
Msa1220460 MtrunA17_Chr5g0401821 43.894 303 109 7 15 310 19 267 7.37e-68 213
Msa1220460 MtrunA17_Chr3g0139021 61.842 152 47 5 160 301 223 373 1.61e-56 187
Msa1220460 MtrunA17_Chr3g0139021 31.797 217 88 7 1 193 1 181 1.97e-16 79.3
Msa1220460 MtrunA17_Chr1g0184691 53.086 162 65 4 149 302 195 353 2.30e-45 157
Msa1220460 MtrunA17_Chr7g0228941 67.089 79 26 0 221 299 31 109 4.32e-36 126
Msa1220460 MtrunA17_Chr2g0293481 59.770 87 30 1 218 299 238 324 1.13e-29 117
Msa1220460 MtrunA17_Chr8g0379461 52.688 93 37 1 218 303 45 137 2.35e-28 109
Msa1220460 MtrunA17_Chr7g0248691 61.446 83 27 1 217 299 134 211 7.69e-28 110
Msa1220460 MtrunA17_Chr2g0284321 56.471 85 36 1 217 300 9 93 1.44e-27 107
Msa1220460 MtrunA17_Chr2g0319961 54.255 94 27 2 218 300 50 138 5.57e-27 106
Msa1220460 MtrunA17_Chr8g0348311 61.446 83 27 1 217 299 135 212 8.60e-27 107
Msa1220460 MtrunA17_Chr7g0270051 55.172 87 35 2 217 299 24 110 4.96e-26 103
Msa1220460 MtrunA17_Chr2g0289181 60.317 63 25 0 239 301 11 73 7.10e-24 97.4
Msa1220460 MtrunA17_Chr1g0202461 51.163 86 41 1 217 301 235 320 3.84e-23 98.6
Msa1220460 MtrunA17_Chr8g0387501 64.407 59 21 0 243 301 130 188 2.10e-21 91.7
Msa1220460 MtrunA17_Chr5g0418191 47.368 95 37 3 217 299 283 376 9.18e-21 92.0
Msa1220460 MtrunA17_Chr5g0418191 47.761 67 32 3 234 299 142 206 2.56e-12 67.0
Msa1220460 MtrunA17_Chr4g0042831 47.312 93 37 3 218 299 243 334 2.40e-20 90.5
Msa1220460 MtrunA17_Chr3g0106491 47.872 94 43 3 226 314 346 438 3.88e-20 90.5
Msa1220460 MtrunA17_Chr3g0106491 46.032 63 32 2 243 305 199 259 1.13e-11 65.5
Msa1220460 MtrunA17_Chr3g0101131 49.451 91 37 3 217 299 382 471 4.02e-20 90.9
Msa1220460 MtrunA17_Chr5g0445311 50.633 79 35 2 224 299 343 420 9.35e-20 89.7
Msa1220460 MtrunA17_Chr7g0263531 57.576 66 27 1 234 299 353 417 1.68e-19 88.6
Msa1220460 MtrunA17_Chr7g0263531 50.725 69 31 3 234 301 180 246 6.65e-15 74.7
Msa1220460 MtrunA17_Chr5g0432161 48.276 87 44 1 222 308 401 486 4.01e-19 87.8
Msa1220460 MtrunA17_Chr7g0270191 40.449 89 52 1 217 305 120 207 6.50e-19 85.1
Msa1220460 MtrunA17_Chr3g0079691 43.519 108 50 3 202 299 445 551 7.04e-19 87.4
Msa1220460 MtrunA17_Chr3g0079691 44.928 69 35 3 232 299 269 335 3.21e-12 67.0
Msa1220460 MtrunA17_Chr4g0001361 45.556 90 45 2 216 301 132 221 1.09e-18 85.1
Msa1220460 MtrunA17_Chr7g0218081 59.016 61 24 1 239 299 407 466 1.39e-18 86.3
Msa1220460 MtrunA17_Chr7g0218081 50.746 67 30 3 234 299 219 283 1.44e-13 71.2
Msa1220460 MtrunA17_Chr3g0136961 56.897 58 25 0 243 300 139 196 1.66e-18 84.0
Msa1220460 MtrunA17_Chr3g0099641 47.500 80 41 1 221 300 231 309 2.28e-18 85.1
Msa1220460 MtrunA17_Chr7g0243891 42.857 105 54 3 206 309 342 441 2.72e-18 85.1
Msa1220460 MtrunA17_Chr4g0004911 49.351 77 35 2 226 299 317 392 3.00e-18 85.1
Msa1220460 MtrunA17_Chr4g0004911 41.333 75 39 2 243 313 185 258 2.00e-11 64.7
Msa1220460 MtrunA17_Chr2g0288871 50.000 74 37 0 226 299 289 362 7.67e-18 84.0
Msa1220460 MtrunA17_Chr2g0322391 48.000 75 39 0 226 300 333 407 7.68e-18 84.0
Msa1220460 MtrunA17_Chr7g0249301 48.718 78 36 2 225 299 272 348 7.98e-18 83.2
Msa1220460 MtrunA17_Chr7g0249301 52.542 59 26 2 243 301 63 119 7.41e-13 68.6
Msa1220460 MtrunA17_Chr5g0418781 39.583 96 57 1 217 312 99 193 1.06e-17 81.6
Msa1220460 MtrunA17_Chr7g0238921 37.190 121 64 4 181 299 70 180 2.03e-17 81.3
Msa1220460 MtrunA17_Chr7g0249311 45.745 94 39 3 217 299 356 448 2.28e-17 82.8
Msa1220460 MtrunA17_Chr7g0249311 49.153 59 28 2 243 301 180 236 6.59e-12 66.2
Msa1220460 MtrunA17_Chr1g0194481 37.624 101 58 2 217 313 133 232 2.98e-17 80.9
Msa1220460 MtrunA17_Chr4g0075201 47.297 74 39 0 226 299 251 324 3.80e-17 81.6
Msa1220460 MtrunA17_Chr7g0270831 53.226 62 29 0 238 299 212 273 6.34e-17 80.9
Msa1220460 MtrunA17_Chr4g0074001 53.125 64 29 1 240 303 357 419 7.91e-17 80.9
Msa1220460 MtrunA17_Chr1g0150801 46.479 71 37 1 229 299 89 158 8.72e-17 76.6
Msa1220460 MtrunA17_Chr4g0051881 46.479 71 37 1 229 299 165 234 1.12e-16 79.3
Msa1220460 MtrunA17_Chr1g0150281 50.000 58 29 0 243 300 141 198 1.20e-16 78.6
Msa1220460 MtrunA17_Chr4g0051181 39.806 103 53 2 197 299 207 300 1.25e-16 80.1
Msa1220460 MtrunA17_Chr7g0216891 43.678 87 41 2 223 307 204 284 1.88e-16 79.7
Msa1220460 MtrunA17_Chr5g0443131 47.887 71 36 1 229 299 144 213 1.99e-16 78.6
Msa1220460 MtrunA17_Chr2g0333851 45.570 79 42 1 221 299 149 226 2.80e-16 78.2
Msa1220460 MtrunA17_Chr2g0294231 39.560 91 52 2 225 313 186 275 3.49e-16 78.6
Msa1220460 MtrunA17_Chr5g0447701 45.122 82 42 2 229 310 239 317 6.21e-16 77.8
Msa1220460 MtrunA17_Chr8g0335811 39.080 87 49 2 217 300 126 211 8.16e-16 75.5
Msa1220460 MtrunA17_Chr8g0383351 46.032 63 33 1 238 300 156 217 9.89e-16 75.1
Msa1220460 MtrunA17_Chr8g0347251 41.935 93 51 2 213 302 106 198 1.27e-15 76.6
Msa1220460 MtrunA17_Chr4g0068541 39.560 91 51 2 226 313 192 281 2.24e-15 76.3
Msa1220460 MtrunA17_Chr7g0275531 33.884 121 74 3 183 297 55 175 2.28e-15 75.5
Msa1220460 MtrunA17_Chr1g0188941 44.578 83 42 2 217 299 29 107 2.37e-15 71.2
Msa1220460 MtrunA17_Chr3g0129361 42.105 76 40 2 228 300 127 201 2.98e-15 73.6
Msa1220460 MtrunA17_Chr4g0025061 51.724 58 28 0 242 299 360 417 3.19e-15 76.3
Msa1220460 MtrunA17_Chr4g0060271 50.000 64 30 1 239 300 250 313 4.36e-15 75.9
Msa1220460 MtrunA17_Chr8g0383251 50.820 61 29 1 239 299 105 164 8.46e-15 71.6
Msa1220460 MtrunA17_Chr2g0302391 52.632 57 27 0 243 299 212 268 8.89e-15 74.3
Msa1220460 MtrunA17_Chr7g0248721 43.373 83 42 3 220 299 116 196 9.71e-15 72.0
Msa1220460 MtrunA17_Chr7g0224801 46.774 62 32 1 238 299 89 149 1.58e-14 70.5
Msa1220460 MtrunA17_Chr3g0129321 30.256 195 99 9 121 299 1 174 2.05e-14 70.9
Msa1220460 MtrunA17_Chr3g0126391 35.652 115 66 3 186 297 81 190 2.41e-14 72.8
Msa1220460 MtrunA17_Chr6g0485431 47.059 68 34 2 239 305 151 217 3.65e-14 72.4
Msa1220460 MtrunA17_Chr1g0150271 47.541 61 32 0 240 300 99 159 5.69e-14 70.5
Msa1220460 MtrunA17_Chr4g0025051 44.304 79 38 2 221 299 320 392 7.40e-14 72.0
Msa1220460 MtrunA17_Chr1g0189391 51.515 66 30 2 239 303 94 158 8.58e-14 70.9
Msa1220460 MtrunA17_Chr8g0386241 44.262 61 33 1 239 299 100 159 2.25e-13 67.4
Msa1220460 MtrunA17_Chr5g0428351 42.857 84 39 2 216 297 164 240 1.11e-12 67.4
Msa1220460 MtrunA17_Chr8g0387981 40.449 89 48 3 217 301 106 193 3.70e-12 66.2
Msa1220460 MtrunA17_Chr5g0402931 50.877 57 25 2 243 299 124 177 4.61e-12 63.5
Msa1220460 MtrunA17_Chr3g0128671 40.000 90 44 2 218 305 111 192 7.70e-12 65.1
Msa1220460 MtrunA17_Chr5g0431811 28.409 176 99 5 148 314 591 748 1.34e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1220460 AT4G31550.1 53.392 339 92 10 1 304 1 308 2.09e-107 316
Msa1220460 AT4G31550.2 53.392 339 91 11 1 304 1 307 3.37e-106 313
Msa1220460 AT2G24570.1 50.893 336 102 11 1 304 1 305 6.79e-94 281
Msa1220460 AT4G31550.3 49.832 297 82 11 1 262 1 265 4.57e-76 234
Msa1220460 AT2G23320.1 39.869 306 134 9 18 300 20 298 3.24e-61 197
Msa1220460 AT5G28650.1 37.126 334 147 9 19 303 4 323 4.87e-54 179
Msa1220460 AT3G04670.1 36.202 337 146 10 19 303 4 323 3.42e-52 175
Msa1220460 AT2G30590.1 57.718 149 52 3 160 299 224 370 3.27e-50 171
Msa1220460 AT2G23320.2 34.701 268 125 9 18 262 20 260 4.61e-35 128
Msa1220460 AT2G34830.1 58.163 98 36 2 207 299 175 272 1.94e-30 119
Msa1220460 AT2G34830.2 58.163 98 36 2 207 299 184 281 2.68e-30 119
Msa1220460 AT1G30650.1 56.842 95 36 2 218 307 188 282 2.50e-29 116
Msa1220460 AT1G29280.1 59.783 92 30 3 215 299 40 131 3.16e-29 112
Msa1220460 AT3G04670.2 32.333 300 134 10 19 266 4 286 9.46e-29 112
Msa1220460 AT4G01250.1 59.036 83 29 1 217 299 108 185 2.79e-26 105
Msa1220460 AT3G58710.2 53.763 93 27 2 218 299 40 127 3.87e-26 105
Msa1220460 AT5G52830.1 59.036 83 30 1 217 299 144 222 9.95e-26 105
Msa1220460 AT3G58710.1 53.763 93 27 2 218 299 41 128 1.15e-25 103
Msa1220460 AT5G45050.2 53.012 83 35 1 217 299 1131 1209 8.77e-22 96.7
Msa1220460 AT5G45050.1 53.012 83 35 1 217 299 1159 1237 8.89e-22 96.7
Msa1220460 AT5G45050.4 53.012 83 35 1 217 299 1020 1098 9.91e-22 96.3
Msa1220460 AT4G23550.1 60.938 64 25 0 236 299 134 197 3.54e-21 92.0
Msa1220460 AT2G04880.1 54.930 71 31 1 229 299 294 363 8.63e-21 92.8
Msa1220460 AT2G04880.2 54.930 71 31 1 229 299 270 339 9.73e-21 92.4
Msa1220460 AT2G38470.1 47.191 89 43 2 226 311 343 430 1.09e-20 92.8
Msa1220460 AT2G38470.1 49.123 57 27 2 243 299 185 239 4.14e-11 63.9
Msa1220460 AT1G13960.2 36.257 171 80 7 141 299 159 312 1.74e-20 90.9
Msa1220460 AT1G13960.2 50.000 62 28 3 239 299 72 131 5.07e-13 69.3
Msa1220460 AT5G07100.2 51.852 81 37 2 219 299 119 197 5.00e-20 87.0
Msa1220460 AT5G07100.4 51.852 81 37 2 219 299 119 197 5.00e-20 87.0
Msa1220460 AT5G07100.5 51.852 81 37 2 219 299 119 197 5.00e-20 87.0
Msa1220460 AT5G07100.3 51.852 81 37 2 219 299 119 197 5.00e-20 87.0
Msa1220460 AT1G13960.1 47.368 95 36 3 218 299 372 465 5.39e-20 90.5
Msa1220460 AT1G13960.1 50.000 62 28 3 239 299 225 284 5.11e-13 69.7
Msa1220460 AT5G07100.1 42.718 103 56 2 199 299 189 290 7.32e-20 88.6
Msa1220460 AT5G26170.1 50.000 72 35 1 229 300 100 170 8.54e-20 85.5
Msa1220460 AT2G03340.1 46.809 94 37 3 218 299 379 471 2.44e-19 88.6
Msa1220460 AT2G03340.1 49.206 63 29 3 238 299 245 305 1.10e-12 68.9
Msa1220460 AT2G37260.3 50.602 83 40 1 217 299 244 325 3.96e-19 87.0
Msa1220460 AT2G37260.3 49.153 59 28 2 243 301 86 142 4.98e-11 63.2
Msa1220460 AT2G37260.2 50.602 83 40 1 217 299 242 323 4.03e-19 87.0
Msa1220460 AT2G37260.2 49.153 59 28 2 243 301 84 140 4.94e-11 63.2
Msa1220460 AT2G37260.1 50.602 83 40 1 217 299 324 405 5.68e-19 87.4
Msa1220460 AT2G37260.1 49.153 59 28 2 243 301 166 222 3.88e-11 63.9
Msa1220460 AT4G26640.5 52.703 74 34 1 226 299 189 261 5.76e-19 87.0
Msa1220460 AT4G26640.6 52.703 74 34 1 226 299 189 261 5.76e-19 87.0
Msa1220460 AT4G26640.4 52.703 74 34 1 226 299 189 261 5.76e-19 87.0
Msa1220460 AT4G26640.3 52.703 74 34 1 226 299 189 261 5.76e-19 87.0
Msa1220460 AT4G26640.1 52.703 74 34 1 226 299 293 365 9.92e-19 86.7
Msa1220460 AT4G26640.2 52.703 74 34 1 226 299 365 437 1.00e-18 87.0
Msa1220460 AT4G26640.7 52.703 74 34 1 226 299 325 397 1.11e-18 86.7
Msa1220460 AT4G31800.2 46.575 73 39 0 227 299 96 168 2.14e-18 83.2
Msa1220460 AT4G31800.1 46.575 73 39 0 227 299 161 233 3.43e-18 84.0
Msa1220460 AT5G56270.1 47.872 94 37 3 217 299 451 543 5.02e-18 85.1
Msa1220460 AT5G45260.1 46.512 86 38 2 218 301 1190 1269 6.72e-18 85.1
Msa1220460 AT5G49520.1 47.297 74 38 1 226 299 205 277 7.21e-18 84.0
Msa1220460 AT1G29860.1 47.297 74 38 1 226 299 120 192 8.80e-18 82.4
Msa1220460 AT4G04450.2 48.649 74 38 0 226 299 182 255 9.71e-18 83.6
Msa1220460 AT4G18170.1 43.243 111 49 4 194 299 127 228 1.29e-17 82.4
Msa1220460 AT1G62300.1 48.649 74 38 0 226 299 296 369 1.61e-17 83.6
Msa1220460 AT4G04450.1 48.649 74 38 0 226 299 276 349 1.96e-17 83.2
Msa1220460 AT4G22070.4 48.649 74 38 0 226 299 281 354 2.08e-17 83.2
Msa1220460 AT4G22070.3 48.649 74 38 0 226 299 281 354 2.08e-17 83.2
Msa1220460 AT4G22070.2 48.649 74 38 0 226 299 281 354 2.08e-17 83.2
Msa1220460 AT4G22070.1 48.649 74 38 0 226 299 281 354 2.08e-17 83.2
Msa1220460 AT2G40740.1 41.905 105 53 3 201 297 126 230 2.14e-17 81.3
Msa1220460 AT4G39410.1 43.023 86 45 2 218 300 196 280 2.29e-17 81.3
Msa1220460 AT2G40740.3 41.905 105 53 3 201 297 135 239 2.66e-17 81.3
Msa1220460 AT4G26440.1 43.519 108 45 3 203 299 326 428 3.96e-17 82.4
Msa1220460 AT4G26440.1 47.458 59 29 2 243 301 179 235 1.80e-11 65.1
Msa1220460 AT2G47260.1 39.000 100 55 2 217 311 149 247 4.38e-17 80.9
Msa1220460 AT1G69310.4 41.667 96 49 4 219 310 121 213 4.44e-17 80.5
Msa1220460 AT1G69310.2 41.667 96 49 4 219 310 121 213 4.44e-17 80.5
Msa1220460 AT1G69310.1 41.667 96 49 4 219 310 121 213 4.44e-17 80.5
Msa1220460 AT3G01080.2 46.914 81 39 2 222 299 321 400 9.49e-17 80.9
Msa1220460 AT3G01080.2 50.000 64 29 3 239 301 201 262 3.81e-13 70.1
Msa1220460 AT3G01080.1 46.914 81 39 2 222 299 283 362 9.87e-17 80.5
Msa1220460 AT3G01080.1 50.000 64 29 3 239 301 163 224 4.24e-13 69.7
Msa1220460 AT5G15130.2 38.168 131 63 6 185 300 116 243 1.30e-16 80.5
Msa1220460 AT5G15130.1 38.168 131 63 6 185 300 158 285 1.58e-16 80.5
Msa1220460 AT1G64000.1 39.286 84 50 1 216 299 88 170 1.94e-16 76.6
Msa1220460 AT4G30935.1 33.813 139 70 4 183 303 257 391 2.03e-16 80.1
Msa1220460 AT3G62340.1 42.529 87 44 3 222 304 95 179 6.24e-16 77.0
Msa1220460 AT1G68150.1 53.448 58 27 0 242 299 235 292 6.54e-16 77.8
Msa1220460 AT1G55600.1 43.590 78 43 1 222 299 287 363 8.46e-16 78.2
Msa1220460 AT4G01720.1 46.250 80 37 2 220 299 223 296 8.53e-16 78.2
Msa1220460 AT3G01970.1 49.206 63 31 1 238 300 61 122 1.12e-15 73.6
Msa1220460 AT2G44745.1 39.286 84 47 2 219 299 119 201 1.29e-15 75.1
Msa1220460 AT2G21900.1 44.186 86 41 3 218 299 83 165 1.29e-15 74.7
Msa1220460 AT5G46350.1 46.479 71 37 1 229 299 170 239 1.48e-15 76.6
Msa1220460 AT5G41570.1 40.698 86 47 2 217 299 70 154 1.53e-15 73.9
Msa1220460 AT5G64810.1 46.479 71 37 1 229 299 97 166 5.51e-15 72.8
Msa1220460 AT5G43290.1 49.367 79 35 3 222 299 96 170 1.05e-14 73.6
Msa1220460 AT1G80840.1 39.326 89 48 2 216 299 116 203 1.18e-14 73.6
Msa1220460 AT2G25000.2 49.123 57 29 0 243 299 104 160 1.33e-14 72.4
Msa1220460 AT2G25000.4 49.123 57 29 0 243 299 104 160 1.33e-14 72.4
Msa1220460 AT2G30250.1 52.459 61 28 1 239 299 325 384 1.44e-14 73.9
Msa1220460 AT5G13080.1 46.774 62 32 1 238 299 63 123 1.87e-14 70.1
Msa1220460 AT1G18860.1 51.724 58 28 0 242 299 239 296 2.13e-14 73.9
Msa1220460 AT2G25000.3 49.123 57 29 0 243 299 126 182 2.76e-14 71.6
Msa1220460 AT2G25000.1 49.123 57 29 0 243 299 147 203 3.52e-14 72.0
Msa1220460 AT4G11070.2 36.090 133 74 3 182 303 40 172 6.07e-14 71.2
Msa1220460 AT4G11070.1 36.090 133 74 3 182 303 72 204 7.29e-14 71.2
Msa1220460 AT2G46130.1 46.774 62 32 1 238 299 26 86 9.31e-14 67.0
Msa1220460 AT5G24110.1 40.217 92 52 2 217 306 89 179 1.53e-13 70.5
Msa1220460 AT1G66560.1 54.237 59 25 1 241 297 102 160 2.69e-13 68.9
Msa1220460 AT3G01080.3 51.613 62 27 3 239 299 201 260 2.86e-13 69.7
Msa1220460 AT4G23810.1 38.053 113 63 3 198 303 109 221 5.81e-13 68.9
Msa1220460 AT1G69310.3 39.583 96 47 5 219 310 121 209 8.02e-13 68.2
Msa1220460 AT1G69810.1 47.458 59 30 1 242 299 203 261 2.43e-12 67.4
Msa1220460 AT3G56400.1 39.286 84 41 2 216 297 102 177 2.51e-12 66.6
Msa1220460 AT1G69810.2 47.458 59 30 1 242 299 145 203 3.12e-12 66.6
Msa1220460 AT5G01900.1 50.000 60 28 1 240 297 108 167 3.31e-11 63.2
Msa1220460 AT1G66550.1 47.458 59 29 1 241 297 107 165 6.90e-11 62.0
Msa1220460 AT1G66550.2 47.458 59 29 1 241 297 102 160 7.00e-11 62.0

Find 106 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAATCATAGATAAATTT+AGG 0.217518 8_1:+83654902 Msa1220460:three_prime_UTR
TTGACTTTCCTACTCTTTCT+TGG 0.231266 8_1:-83654436 None:intergenic
TTATTTATTGGTTGGACTTT+GGG 0.232620 8_1:+83654572 Msa1220460:three_prime_UTR
GCTATAAGCTTCCTTTGATT+TGG 0.254346 8_1:-83653598 None:intergenic
TGTTCATCCATCCTCATCTT+TGG 0.260460 8_1:-83653174 None:intergenic
TTGGATTTGACATGACTAAT+TGG 0.260726 8_1:-83653512 None:intergenic
ACCTAAATTTATCTATGATT+TGG 0.269501 8_1:-83654903 None:intergenic
TTGAGATTGGGATTTGGATT+TGG 0.315751 8_1:-83653531 None:intergenic
TTGATTTACTAGTATATATT+CGG 0.316828 8_1:+83654613 Msa1220460:three_prime_UTR
GGGTAAGGTGAACCTTTAAT+AGG 0.321141 8_1:-83654001 None:intergenic
TTTATTTATTGGTTGGACTT+TGG 0.332118 8_1:+83654571 Msa1220460:three_prime_UTR
GAGTGTGGAGATTTCAGTTT+TGG 0.333538 8_1:+83654765 Msa1220460:three_prime_UTR
CTTATTATATTGACTCGATT+TGG 0.339124 8_1:-83654878 None:intergenic
CTCATCTTTGGAATCATTAC+CGG 0.343588 8_1:-83653162 None:intergenic
TTTGTGTTGTGTTGTTGTTT+AGG 0.346728 8_1:-83653049 None:intergenic
TTTGAATATGAGGGTAAAGT+TGG 0.350604 8_1:+83654727 Msa1220460:three_prime_UTR
CAGCGCCGGTTACGACGGTT+TGG 0.360565 8_1:-83654270 None:intergenic
CAAAGATAAATTTGAATATG+AGG 0.365465 8_1:+83654717 Msa1220460:three_prime_UTR
ATAGGTAACAACAAGCATAT+TGG 0.370765 8_1:-83654227 None:intergenic
GGTTGAATCTTGAATTTCTC+AGG 0.376048 8_1:-83653456 None:intergenic
TAGGTAACAACAAGCATATT+GGG 0.376102 8_1:-83654226 None:intergenic
CAAATCGAGTCAATATAATA+AGG 0.376718 8_1:+83654879 Msa1220460:three_prime_UTR
AGTCGTCTACGAGTTGTGAT+AGG 0.379543 8_1:+83654487 Msa1220460:three_prime_UTR
ATCAATTAAATCAAAACAAC+TGG 0.389106 8_1:-83654595 None:intergenic
TTTCTTCTCCGTTACCGTTA+CGG 0.392372 8_1:-83654405 None:intergenic
ATCGGAAACGCTTCCGTCTC+CGG 0.395927 8_1:-83653658 None:intergenic
ATGCTTGTTGTTACCTATGA+AGG 0.398920 8_1:+83654232 Msa1220460:CDS
GACACCAATCGACATTCTAA+TGG 0.404627 8_1:-83654789 None:intergenic
ATTCAAGAAGCTGCTTCTGC+TGG 0.410708 8_1:+83653204 Msa1220460:CDS
AGCGCCGGTTACGACGGTTT+GGG 0.420754 8_1:-83654269 None:intergenic
TTAGGTTTGAGATTGGGATT+TGG 0.423199 8_1:-83653537 None:intergenic
CACTGTTTCTAAGTTTAAAA+CGG 0.427675 8_1:+83653350 Msa1220460:CDS
TTCTGCTGGATTGAAAAGTA+TGG 0.429072 8_1:+83653218 Msa1220460:CDS
GAAGAGAACAATTCGTGTTC+CGG 0.431711 8_1:+83653913 Msa1220460:CDS
ACAGAGAAGTTTGAGAGAAA+AGG 0.439403 8_1:-83653096 None:intergenic
TTGCTTCATCTCACCGGAAA+AGG 0.439863 8_1:+83653721 Msa1220460:CDS
AACGCTTCCGTCTCCGGTGA+TGG 0.445555 8_1:-83653652 None:intergenic
GTGACGGTGCTCTCCTTCAT+AGG 0.447462 8_1:-83654245 None:intergenic
TTATTTATTTATTTATTGGT+TGG 0.461916 8_1:+83654564 Msa1220460:three_prime_UTR
AATGGTAGATTTGAATCAGC+TGG 0.463245 8_1:-83654831 None:intergenic
AGCGTTTCCGATGGGAAAAT+CGG 0.472106 8_1:+83653669 Msa1220460:CDS
TGTCACGAAGCCACCATCTC+CGG 0.476339 8_1:+83653744 Msa1220460:CDS
TCAACGTAACCAACTAGATC+TGG 0.482987 8_1:+83653293 Msa1220460:CDS
TAACGGTAACGGAGAAGAAA+CGG 0.486217 8_1:+83654408 Msa1220460:three_prime_UTR
AGACAAGATGGTTGTAGATC+CGG 0.492204 8_1:+83653143 Msa1220460:exon
TATAAGTGTAGTAGCTTCAA+AGG 0.492847 8_1:+83654163 Msa1220460:CDS
ACCGGAGGATGAGACTTTGC+CGG 0.493124 8_1:-83653763 None:intergenic
ATAGAAAATTACCGTGGGTA+AGG 0.495916 8_1:-83654016 None:intergenic
GTTTATTAACCAGATCTAGT+TGG 0.498964 8_1:-83653302 None:intergenic
GGATGAGACTTTGCCGGAGA+TGG 0.499465 8_1:-83653757 None:intergenic
TCCGGCAAAGTCTCATCCTC+CGG 0.500468 8_1:+83653762 Msa1220460:CDS
CCCCTCTTGCTTCATCTCAC+CGG 0.500785 8_1:+83653715 Msa1220460:CDS
CTCCACGAAAATTCGTCTGA+TGG 0.502658 8_1:-83653962 None:intergenic
ATCGGTCCTATCATTTCCTC+CGG 0.509860 8_1:+83653687 Msa1220460:CDS
ACGACGAAAACGAGCATGAC+CGG 0.511271 8_1:-83653394 None:intergenic
GAGAAGTTTGAGAGAAAAGG+AGG 0.512615 8_1:-83653093 None:intergenic
TCTTTCATGTCCACCATCAC+CGG 0.515159 8_1:+83653639 Msa1220460:CDS
TAGTAGCTTCAAAGGATGTC+CGG 0.515213 8_1:+83654171 Msa1220460:CDS
TGCTGTAACCGTAACGGTAA+CGG 0.516976 8_1:+83654397 Msa1220460:three_prime_UTR
ATTAACTTGTTAAATCGTAC+CGG 0.518687 8_1:+83653375 Msa1220460:CDS
TATGAGGGTAAAGTTGGAAA+AGG 0.520514 8_1:+83654733 Msa1220460:three_prime_UTR
AAAGATAAATTTGAATATGA+GGG 0.522143 8_1:+83654718 Msa1220460:three_prime_UTR
ATCAGCAGCGACGCTTAAAG+AGG 0.524572 8_1:-83654307 None:intergenic
CTTTCTACATGCTTCCTCGC+CGG 0.525809 8_1:-83654190 None:intergenic
CTTAGAGCAATGGCAGTGAC+CGG 0.532910 8_1:-83653781 None:intergenic
GTCGATTGGTGTCCAAGAAG+TGG 0.547099 8_1:+83654799 Msa1220460:three_prime_UTR
CTTTAAGCGTCGCTGCTGAT+CGG 0.549523 8_1:+83654310 Msa1220460:exon
GAATCCAGCGCCGGTTACGA+CGG 0.554487 8_1:-83654275 None:intergenic
TTTACCTTCTCTTAGAGCAA+TGG 0.555901 8_1:-83653791 None:intergenic
TAGATTTGAATCAGCTGGAA+GGG 0.561210 8_1:-83654826 None:intergenic
TCCGGTGAGATGAAGCAAGA+GGG 0.562916 8_1:-83653716 None:intergenic
AAAAGGAGAATAGAAGAGTG+TGG 0.564065 8_1:+83654750 Msa1220460:three_prime_UTR
AGATTTGAATCAGCTGGAAG+GGG 0.564529 8_1:-83654825 None:intergenic
TCGCCGTTTGCATTTGATGA+CGG 0.564653 8_1:+83654369 Msa1220460:three_prime_UTR
TGAGACTTTGCCGGAGATGG+TGG 0.571854 8_1:-83653754 None:intergenic
GTCGTCTACGAGTTGTGATA+GGG 0.572101 8_1:+83654488 Msa1220460:three_prime_UTR
TGGTCCATTAGAATGTCGAT+TGG 0.575299 8_1:+83654785 Msa1220460:three_prime_UTR
CGGAGATTCCAAGAAAGAGT+AGG 0.580059 8_1:+83654428 Msa1220460:three_prime_UTR
ACTCCGTCATCAAATGCAAA+CGG 0.586972 8_1:-83654372 None:intergenic
GCTTCCGTCTCCGGTGATGG+TGG 0.590496 8_1:-83653649 None:intergenic
ATGTCCACCATCACCGGAGA+CGG 0.591163 8_1:+83653645 Msa1220460:CDS
TCGATTGGTGTCCAAGAAGT+GGG 0.591471 8_1:+83654800 Msa1220460:three_prime_UTR
TTTGACATGACTAATTGGAT+CGG 0.592954 8_1:-83653507 None:intergenic
GTAGATTTGAATCAGCTGGA+AGG 0.594016 8_1:-83654827 None:intergenic
TTCTCAATACTCCAAATCAA+AGG 0.597573 8_1:+83653587 Msa1220460:CDS
CGGTAATGATTCCAAAGATG+AGG 0.598123 8_1:+83653163 Msa1220460:CDS
TTACGACGGTTTGGGCGTGA+CGG 0.599073 8_1:-83654261 None:intergenic
AATGATTCCAAAGATGAGGA+TGG 0.600951 8_1:+83653167 Msa1220460:CDS
GGCTTGCCGGAGGAAATGAT+AGG 0.601533 8_1:-83653693 None:intergenic
TGAAATTGAGAAGAAGAACA+AGG 0.606949 8_1:-83653420 None:intergenic
GGAGACGGAAGCGTTTCCGA+TGG 0.608595 8_1:+83653660 Msa1220460:CDS
ACTGCCATTGCTCTAAGAGA+AGG 0.610372 8_1:+83653787 Msa1220460:CDS
GAGACGGAAGCGTTTCCGAT+GGG 0.610826 8_1:+83653661 Msa1220460:CDS
CTGAGATATGAATCCAGCGC+CGG 0.615026 8_1:-83654284 None:intergenic
ATAATAAATTGACATTACAA+TGG 0.625904 8_1:-83654849 None:intergenic
TTCCGGTGAGATGAAGCAAG+AGG 0.637613 8_1:-83653717 None:intergenic
CGGTGAGATGAAGCAAGAGG+GGG 0.640070 8_1:-83653714 None:intergenic
CCGGTGAGATGAAGCAAGAG+GGG 0.640954 8_1:-83653715 None:intergenic
TTAAAGGTTCACCTTACCCA+CGG 0.642405 8_1:+83654005 Msa1220460:CDS
GGACATGAAAGACGAAGTAG+TGG 0.653461 8_1:-83653628 None:intergenic
AGAGCAATGGCAGTGACCGG+AGG 0.667641 8_1:-83653778 None:intergenic
GAGTTATGCTGTAACCGTAA+CGG 0.678014 8_1:+83654391 Msa1220460:three_prime_UTR
GATTTGAATCAGCTGGAAGG+GGG 0.679074 8_1:-83654824 None:intergenic
GCTTCAAAGGATGTCCGGCG+AGG 0.702260 8_1:+83654176 Msa1220460:CDS
CGTAGACGACTCATTCATTG+CGG 0.729637 8_1:-83654475 None:intergenic
AAATCAAGAGTAGTTGACTG+TGG 0.752289 8_1:-83653477 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTAATTAATTTTTCATA+TGG - chr8_1:83654063-83654082 None:intergenic 10.0%
!! GAAAAATTAATTAATCAATT+CGG + chr8_1:83654066-83654085 Msa1220460:intron 10.0%
!! AAAAATTAATTAATCAATTC+GGG + chr8_1:83654067-83654086 Msa1220460:intron 10.0%
!! TTATTTATTTATTTATTGGT+TGG + chr8_1:83654564-83654583 Msa1220460:three_prime_UTR 10.0%
!!! TGATTAATTAATTTTTCATA+TGG - chr8_1:83654063-83654082 None:intergenic 10.0%
!! GAAAAATTAATTAATCAATT+CGG + chr8_1:83654066-83654085 Msa1220460:intron 10.0%
!! AAAAATTAATTAATCAATTC+GGG + chr8_1:83654067-83654086 Msa1220460:intron 10.0%
!! TTATTTATTTATTTATTGGT+TGG + chr8_1:83654564-83654583 Msa1220460:three_prime_UTR 10.0%
!!! AATTAATTTTTCATATGGTT+AGG - chr8_1:83654058-83654077 None:intergenic 15.0%
!! TTGTGGTTAAAATTAATTAA+TGG + chr8_1:83654111-83654130 Msa1220460:intron 15.0%
!! TTGATTTACTAGTATATATT+CGG + chr8_1:83654613-83654632 Msa1220460:three_prime_UTR 15.0%
!! AAAGATAAATTTGAATATGA+GGG + chr8_1:83654718-83654737 Msa1220460:three_prime_UTR 15.0%
!! ATAATAAATTGACATTACAA+TGG - chr8_1:83654852-83654871 None:intergenic 15.0%
!!! AATTAATTTTTCATATGGTT+AGG - chr8_1:83654058-83654077 None:intergenic 15.0%
!! TTGTGGTTAAAATTAATTAA+TGG + chr8_1:83654111-83654130 Msa1220460:intron 15.0%
!! TTGATTTACTAGTATATATT+CGG + chr8_1:83654613-83654632 Msa1220460:three_prime_UTR 15.0%
!! AAAGATAAATTTGAATATGA+GGG + chr8_1:83654718-83654737 Msa1220460:three_prime_UTR 15.0%
!! ATAATAAATTGACATTACAA+TGG - chr8_1:83654852-83654871 None:intergenic 15.0%
!!! TAGTATTTAAGATCTAATTG+TGG + chr8_1:83654094-83654113 Msa1220460:intron 20.0%
!! TTTATTTATGAAATTTGCAG+TGG + chr8_1:83654136-83654155 Msa1220460:intron 20.0%
!! ATCAATTAAATCAAAACAAC+TGG - chr8_1:83654598-83654617 None:intergenic 20.0%
!! CAAAGATAAATTTGAATATG+AGG + chr8_1:83654717-83654736 Msa1220460:three_prime_UTR 20.0%
!! ACCAAATCATAGATAAATTT+AGG + chr8_1:83654902-83654921 Msa1220460:three_prime_UTR 20.0%
!! ACCTAAATTTATCTATGATT+TGG - chr8_1:83654906-83654925 None:intergenic 20.0%
!!! TAGTATTTAAGATCTAATTG+TGG + chr8_1:83654094-83654113 Msa1220460:intron 20.0%
!! TTTATTTATGAAATTTGCAG+TGG + chr8_1:83654136-83654155 Msa1220460:intron 20.0%
!! ATCAATTAAATCAAAACAAC+TGG - chr8_1:83654598-83654617 None:intergenic 20.0%
!! CAAAGATAAATTTGAATATG+AGG + chr8_1:83654717-83654736 Msa1220460:three_prime_UTR 20.0%
!! ACCAAATCATAGATAAATTT+AGG + chr8_1:83654902-83654921 Msa1220460:three_prime_UTR 20.0%
!! ACCTAAATTTATCTATGATT+TGG - chr8_1:83654906-83654925 None:intergenic 20.0%
!!! CACTGTTTCTAAGTTTAAAA+CGG + chr8_1:83653350-83653369 Msa1220460:CDS 25.0%
!!! ATTAACTTGTTAAATCGTAC+CGG + chr8_1:83653375-83653394 Msa1220460:CDS 25.0%
!!! TTAGTTTTAGGTTTGAGATT+GGG - chr8_1:83653546-83653565 None:intergenic 25.0%
!!! ATTAGTTTTAGGTTTGAGAT+TGG - chr8_1:83653547-83653566 None:intergenic 25.0%
!!! TCAGTAGATTGATTAGTTTT+AGG - chr8_1:83653558-83653577 None:intergenic 25.0%
! AGAATTTAGTGTTTGGATTT+GGG - chr8_1:83653819-83653838 None:intergenic 25.0%
! TTACTTGAGAATTTAGTGTT+TGG - chr8_1:83653826-83653845 None:intergenic 25.0%
!!! CTTGTTGTTTTTTCTTAATC+AGG + chr8_1:83653879-83653898 Msa1220460:intron 25.0%
!!! AAAGTCAACTTTTACTTTTG+TGG + chr8_1:83654451-83654470 Msa1220460:three_prime_UTR 25.0%
!!! TTTCATGATAATTGTTTTGC+CGG - chr8_1:83654528-83654547 None:intergenic 25.0%
!! TTTATTTATTGGTTGGACTT+TGG + chr8_1:83654571-83654590 Msa1220460:three_prime_UTR 25.0%
!! TTATTTATTGGTTGGACTTT+GGG + chr8_1:83654572-83654591 Msa1220460:three_prime_UTR 25.0%
!! TCTATACTTTTCTTTCAACT+TGG - chr8_1:83654648-83654667 None:intergenic 25.0%
!!! CTTATTATATTGACTCGATT+TGG - chr8_1:83654881-83654900 None:intergenic 25.0%
! CAAATCGAGTCAATATAATA+AGG + chr8_1:83654879-83654898 Msa1220460:three_prime_UTR 25.0%
!!! CACTGTTTCTAAGTTTAAAA+CGG + chr8_1:83653350-83653369 Msa1220460:CDS 25.0%
!!! ATTAACTTGTTAAATCGTAC+CGG + chr8_1:83653375-83653394 Msa1220460:CDS 25.0%
!!! TTAGTTTTAGGTTTGAGATT+GGG - chr8_1:83653546-83653565 None:intergenic 25.0%
!!! ATTAGTTTTAGGTTTGAGAT+TGG - chr8_1:83653547-83653566 None:intergenic 25.0%
!!! TCAGTAGATTGATTAGTTTT+AGG - chr8_1:83653558-83653577 None:intergenic 25.0%
! AGAATTTAGTGTTTGGATTT+GGG - chr8_1:83653819-83653838 None:intergenic 25.0%
! TTACTTGAGAATTTAGTGTT+TGG - chr8_1:83653826-83653845 None:intergenic 25.0%
!!! CTTGTTGTTTTTTCTTAATC+AGG + chr8_1:83653879-83653898 Msa1220460:intron 25.0%
!!! AAAGTCAACTTTTACTTTTG+TGG + chr8_1:83654451-83654470 Msa1220460:three_prime_UTR 25.0%
!!! TTTCATGATAATTGTTTTGC+CGG - chr8_1:83654528-83654547 None:intergenic 25.0%
!! TTTATTTATTGGTTGGACTT+TGG + chr8_1:83654571-83654590 Msa1220460:three_prime_UTR 25.0%
!! TTATTTATTGGTTGGACTTT+GGG + chr8_1:83654572-83654591 Msa1220460:three_prime_UTR 25.0%
!! TCTATACTTTTCTTTCAACT+TGG - chr8_1:83654648-83654667 None:intergenic 25.0%
!!! CTTATTATATTGACTCGATT+TGG - chr8_1:83654881-83654900 None:intergenic 25.0%
! CAAATCGAGTCAATATAATA+AGG + chr8_1:83654879-83654898 Msa1220460:three_prime_UTR 25.0%
!!! AGTTTTAAAGCAAGACAAGA+TGG + chr8_1:83653131-83653150 Msa1220460:exon 30.0%
GTTTATTAACCAGATCTAGT+TGG - chr8_1:83653305-83653324 None:intergenic 30.0%
TGAAATTGAGAAGAAGAACA+AGG - chr8_1:83653423-83653442 None:intergenic 30.0%
TTTGACATGACTAATTGGAT+CGG - chr8_1:83653510-83653529 None:intergenic 30.0%
TTGGATTTGACATGACTAAT+TGG - chr8_1:83653515-83653534 None:intergenic 30.0%
TTCTCAATACTCCAAATCAA+AGG + chr8_1:83653587-83653606 Msa1220460:CDS 30.0%
GAGAATTTAGTGTTTGGATT+TGG - chr8_1:83653820-83653839 None:intergenic 30.0%
TACGGTCAAAAACCTATTAA+AGG + chr8_1:83653989-83654008 Msa1220460:CDS 30.0%
TTTCATATGGTTAGGTTTGA+GGG - chr8_1:83654050-83654069 None:intergenic 30.0%
! TTTTCATATGGTTAGGTTTG+AGG - chr8_1:83654051-83654070 None:intergenic 30.0%
TATAAGTGTAGTAGCTTCAA+AGG + chr8_1:83654163-83654182 Msa1220460:CDS 30.0%
TAGGTAACAACAAGCATATT+GGG - chr8_1:83654229-83654248 None:intergenic 30.0%
ATAGGTAACAACAAGCATAT+TGG - chr8_1:83654230-83654249 None:intergenic 30.0%
! TTCTTTTTCTTTTCAACTCG+TGG - chr8_1:83654679-83654698 None:intergenic 30.0%
GAAAAGAAAAAGAATGCGAA+TGG + chr8_1:83654685-83654704 Msa1220460:three_prime_UTR 30.0%
TTTGAATATGAGGGTAAAGT+TGG + chr8_1:83654727-83654746 Msa1220460:three_prime_UTR 30.0%
!!! AGTTTTAAAGCAAGACAAGA+TGG + chr8_1:83653131-83653150 Msa1220460:exon 30.0%
GTTTATTAACCAGATCTAGT+TGG - chr8_1:83653305-83653324 None:intergenic 30.0%
TGAAATTGAGAAGAAGAACA+AGG - chr8_1:83653423-83653442 None:intergenic 30.0%
TTTGACATGACTAATTGGAT+CGG - chr8_1:83653510-83653529 None:intergenic 30.0%
TTGGATTTGACATGACTAAT+TGG - chr8_1:83653515-83653534 None:intergenic 30.0%
TTCTCAATACTCCAAATCAA+AGG + chr8_1:83653587-83653606 Msa1220460:CDS 30.0%
GAGAATTTAGTGTTTGGATT+TGG - chr8_1:83653820-83653839 None:intergenic 30.0%
TACGGTCAAAAACCTATTAA+AGG + chr8_1:83653989-83654008 Msa1220460:CDS 30.0%
TTTCATATGGTTAGGTTTGA+GGG - chr8_1:83654050-83654069 None:intergenic 30.0%
! TTTTCATATGGTTAGGTTTG+AGG - chr8_1:83654051-83654070 None:intergenic 30.0%
TATAAGTGTAGTAGCTTCAA+AGG + chr8_1:83654163-83654182 Msa1220460:CDS 30.0%
TAGGTAACAACAAGCATATT+GGG - chr8_1:83654229-83654248 None:intergenic 30.0%
ATAGGTAACAACAAGCATAT+TGG - chr8_1:83654230-83654249 None:intergenic 30.0%
! TTCTTTTTCTTTTCAACTCG+TGG - chr8_1:83654679-83654698 None:intergenic 30.0%
GAAAAGAAAAAGAATGCGAA+TGG + chr8_1:83654685-83654704 Msa1220460:three_prime_UTR 30.0%
TTTGAATATGAGGGTAAAGT+TGG + chr8_1:83654727-83654746 Msa1220460:three_prime_UTR 30.0%
ACAGAGAAGTTTGAGAGAAA+AGG - chr8_1:83653099-83653118 None:intergenic 35.0%
!! CTCATCTTTGGAATCATTAC+CGG - chr8_1:83653165-83653184 None:intergenic 35.0%
AATGATTCCAAAGATGAGGA+TGG + chr8_1:83653167-83653186 Msa1220460:CDS 35.0%
TTCTGCTGGATTGAAAAGTA+TGG + chr8_1:83653218-83653237 Msa1220460:CDS 35.0%
GGTTGAATCTTGAATTTCTC+AGG - chr8_1:83653459-83653478 None:intergenic 35.0%
AAATCAAGAGTAGTTGACTG+TGG - chr8_1:83653480-83653499 None:intergenic 35.0%
TTGAGATTGGGATTTGGATT+TGG - chr8_1:83653534-83653553 None:intergenic 35.0%
! TTAGGTTTGAGATTGGGATT+TGG - chr8_1:83653540-83653559 None:intergenic 35.0%
GCTATAAGCTTCCTTTGATT+TGG - chr8_1:83653601-83653620 None:intergenic 35.0%
TTTACCTTCTCTTAGAGCAA+TGG - chr8_1:83653794-83653813 None:intergenic 35.0%
! GAATTTTCGTGGAGGAAATA+CGG + chr8_1:83653971-83653990 Msa1220460:CDS 35.0%
ATAGAAAATTACCGTGGGTA+AGG - chr8_1:83654019-83654038 None:intergenic 35.0%
TCGGAATAGAAAATTACCGT+GGG - chr8_1:83654024-83654043 None:intergenic 35.0%
ATCGGAATAGAAAATTACCG+TGG - chr8_1:83654025-83654044 None:intergenic 35.0%
!! ATGCTTGTTGTTACCTATGA+AGG + chr8_1:83654232-83654251 Msa1220460:CDS 35.0%
TTGACTTTCCTACTCTTTCT+TGG - chr8_1:83654439-83654458 None:intergenic 35.0%
! TAGGGACTTTTGTGTAAATC+CGG + chr8_1:83654506-83654525 Msa1220460:three_prime_UTR 35.0%
! TTCTTTTCAACTCGTGGTTA+TGG - chr8_1:83654673-83654692 None:intergenic 35.0%
TATGAGGGTAAAGTTGGAAA+AGG + chr8_1:83654733-83654752 Msa1220460:three_prime_UTR 35.0%
AAAAGGAGAATAGAAGAGTG+TGG + chr8_1:83654750-83654769 Msa1220460:three_prime_UTR 35.0%
TAGATTTGAATCAGCTGGAA+GGG - chr8_1:83654829-83654848 None:intergenic 35.0%
AATGGTAGATTTGAATCAGC+TGG - chr8_1:83654834-83654853 None:intergenic 35.0%
ACAGAGAAGTTTGAGAGAAA+AGG - chr8_1:83653099-83653118 None:intergenic 35.0%
!! CTCATCTTTGGAATCATTAC+CGG - chr8_1:83653165-83653184 None:intergenic 35.0%
AATGATTCCAAAGATGAGGA+TGG + chr8_1:83653167-83653186 Msa1220460:CDS 35.0%
TTCTGCTGGATTGAAAAGTA+TGG + chr8_1:83653218-83653237 Msa1220460:CDS 35.0%
GGTTGAATCTTGAATTTCTC+AGG - chr8_1:83653459-83653478 None:intergenic 35.0%
AAATCAAGAGTAGTTGACTG+TGG - chr8_1:83653480-83653499 None:intergenic 35.0%
TTGAGATTGGGATTTGGATT+TGG - chr8_1:83653534-83653553 None:intergenic 35.0%
! TTAGGTTTGAGATTGGGATT+TGG - chr8_1:83653540-83653559 None:intergenic 35.0%
GCTATAAGCTTCCTTTGATT+TGG - chr8_1:83653601-83653620 None:intergenic 35.0%
TTTACCTTCTCTTAGAGCAA+TGG - chr8_1:83653794-83653813 None:intergenic 35.0%
! GAATTTTCGTGGAGGAAATA+CGG + chr8_1:83653971-83653990 Msa1220460:CDS 35.0%
ATAGAAAATTACCGTGGGTA+AGG - chr8_1:83654019-83654038 None:intergenic 35.0%
TCGGAATAGAAAATTACCGT+GGG - chr8_1:83654024-83654043 None:intergenic 35.0%
ATCGGAATAGAAAATTACCG+TGG - chr8_1:83654025-83654044 None:intergenic 35.0%
!! ATGCTTGTTGTTACCTATGA+AGG + chr8_1:83654232-83654251 Msa1220460:CDS 35.0%
TTGACTTTCCTACTCTTTCT+TGG - chr8_1:83654439-83654458 None:intergenic 35.0%
! TAGGGACTTTTGTGTAAATC+CGG + chr8_1:83654506-83654525 Msa1220460:three_prime_UTR 35.0%
! TTCTTTTCAACTCGTGGTTA+TGG - chr8_1:83654673-83654692 None:intergenic 35.0%
TATGAGGGTAAAGTTGGAAA+AGG + chr8_1:83654733-83654752 Msa1220460:three_prime_UTR 35.0%
AAAAGGAGAATAGAAGAGTG+TGG + chr8_1:83654750-83654769 Msa1220460:three_prime_UTR 35.0%
TAGATTTGAATCAGCTGGAA+GGG - chr8_1:83654829-83654848 None:intergenic 35.0%
AATGGTAGATTTGAATCAGC+TGG - chr8_1:83654834-83654853 None:intergenic 35.0%
GAGAAGTTTGAGAGAAAAGG+AGG - chr8_1:83653096-83653115 None:intergenic 40.0%
AGACAAGATGGTTGTAGATC+CGG + chr8_1:83653143-83653162 Msa1220460:exon 40.0%
CGGTAATGATTCCAAAGATG+AGG + chr8_1:83653163-83653182 Msa1220460:CDS 40.0%
TGTTCATCCATCCTCATCTT+TGG - chr8_1:83653177-83653196 None:intergenic 40.0%
TCAACGTAACCAACTAGATC+TGG + chr8_1:83653293-83653312 Msa1220460:CDS 40.0%
GAAGAGAACAATTCGTGTTC+CGG + chr8_1:83653913-83653932 Msa1220460:CDS 40.0%
! TTCCATCAGACGAATTTTCG+TGG + chr8_1:83653960-83653979 Msa1220460:CDS 40.0%
GGGTAAGGTGAACCTTTAAT+AGG - chr8_1:83654004-83654023 None:intergenic 40.0%
TTAAAGGTTCACCTTACCCA+CGG + chr8_1:83654005-83654024 Msa1220460:CDS 40.0%
TAGTAGCTTCAAAGGATGTC+CGG + chr8_1:83654171-83654190 Msa1220460:CDS 40.0%
! GCTGCTGATCGGAAAATTTT+CGG + chr8_1:83654321-83654340 Msa1220460:three_prime_UTR 40.0%
ACTCCGTCATCAAATGCAAA+CGG - chr8_1:83654375-83654394 None:intergenic 40.0%
GAGTTATGCTGTAACCGTAA+CGG + chr8_1:83654391-83654410 Msa1220460:three_prime_UTR 40.0%
TTTCTTCTCCGTTACCGTTA+CGG - chr8_1:83654408-83654427 None:intergenic 40.0%
!! TAACGGTAACGGAGAAGAAA+CGG + chr8_1:83654408-83654427 Msa1220460:three_prime_UTR 40.0%
! GAGTGTGGAGATTTCAGTTT+TGG + chr8_1:83654765-83654784 Msa1220460:three_prime_UTR 40.0%
TGGTCCATTAGAATGTCGAT+TGG + chr8_1:83654785-83654804 Msa1220460:three_prime_UTR 40.0%
GACACCAATCGACATTCTAA+TGG - chr8_1:83654792-83654811 None:intergenic 40.0%
AGATTTGAATCAGCTGGAAG+GGG - chr8_1:83654828-83654847 None:intergenic 40.0%
GTAGATTTGAATCAGCTGGA+AGG - chr8_1:83654830-83654849 None:intergenic 40.0%
GAGAAGTTTGAGAGAAAAGG+AGG - chr8_1:83653096-83653115 None:intergenic 40.0%
AGACAAGATGGTTGTAGATC+CGG + chr8_1:83653143-83653162 Msa1220460:exon 40.0%
CGGTAATGATTCCAAAGATG+AGG + chr8_1:83653163-83653182 Msa1220460:CDS 40.0%
TGTTCATCCATCCTCATCTT+TGG - chr8_1:83653177-83653196 None:intergenic 40.0%
TCAACGTAACCAACTAGATC+TGG + chr8_1:83653293-83653312 Msa1220460:CDS 40.0%
GAAGAGAACAATTCGTGTTC+CGG + chr8_1:83653913-83653932 Msa1220460:CDS 40.0%
! TTCCATCAGACGAATTTTCG+TGG + chr8_1:83653960-83653979 Msa1220460:CDS 40.0%
GGGTAAGGTGAACCTTTAAT+AGG - chr8_1:83654004-83654023 None:intergenic 40.0%
TTAAAGGTTCACCTTACCCA+CGG + chr8_1:83654005-83654024 Msa1220460:CDS 40.0%
TAGTAGCTTCAAAGGATGTC+CGG + chr8_1:83654171-83654190 Msa1220460:CDS 40.0%
! GCTGCTGATCGGAAAATTTT+CGG + chr8_1:83654321-83654340 Msa1220460:three_prime_UTR 40.0%
ACTCCGTCATCAAATGCAAA+CGG - chr8_1:83654375-83654394 None:intergenic 40.0%
GAGTTATGCTGTAACCGTAA+CGG + chr8_1:83654391-83654410 Msa1220460:three_prime_UTR 40.0%
TTTCTTCTCCGTTACCGTTA+CGG - chr8_1:83654408-83654427 None:intergenic 40.0%
!! TAACGGTAACGGAGAAGAAA+CGG + chr8_1:83654408-83654427 Msa1220460:three_prime_UTR 40.0%
! GAGTGTGGAGATTTCAGTTT+TGG + chr8_1:83654765-83654784 Msa1220460:three_prime_UTR 40.0%
TGGTCCATTAGAATGTCGAT+TGG + chr8_1:83654785-83654804 Msa1220460:three_prime_UTR 40.0%
GACACCAATCGACATTCTAA+TGG - chr8_1:83654792-83654811 None:intergenic 40.0%
AGATTTGAATCAGCTGGAAG+GGG - chr8_1:83654828-83654847 None:intergenic 40.0%
GTAGATTTGAATCAGCTGGA+AGG - chr8_1:83654830-83654849 None:intergenic 40.0%
ATTCAAGAAGCTGCTTCTGC+TGG + chr8_1:83653204-83653223 Msa1220460:CDS 45.0%
GGACATGAAAGACGAAGTAG+TGG - chr8_1:83653631-83653650 None:intergenic 45.0%
TCTTTCATGTCCACCATCAC+CGG + chr8_1:83653639-83653658 Msa1220460:CDS 45.0%
AGCGTTTCCGATGGGAAAAT+CGG + chr8_1:83653669-83653688 Msa1220460:CDS 45.0%
!! GATAGGACCGATTTTCCCAT+CGG - chr8_1:83653679-83653698 None:intergenic 45.0%
ATCGGTCCTATCATTTCCTC+CGG + chr8_1:83653687-83653706 Msa1220460:CDS 45.0%
TTGCTTCATCTCACCGGAAA+AGG + chr8_1:83653721-83653740 Msa1220460:CDS 45.0%
!! ACTGCCATTGCTCTAAGAGA+AGG + chr8_1:83653787-83653806 Msa1220460:CDS 45.0%
! GCGACTTTTGAACTTATCGC+CGG - chr8_1:83653935-83653954 None:intergenic 45.0%
CTCCACGAAAATTCGTCTGA+TGG - chr8_1:83653965-83653984 None:intergenic 45.0%
! CATCAGACGAATTTTCGTGG+AGG + chr8_1:83653963-83653982 Msa1220460:CDS 45.0%
TGGTTAGGTTTGAGGGTGAT+CGG - chr8_1:83654043-83654062 None:intergenic 45.0%
TCGCCGTTTGCATTTGATGA+CGG + chr8_1:83654369-83654388 Msa1220460:three_prime_UTR 45.0%
TGCTGTAACCGTAACGGTAA+CGG + chr8_1:83654397-83654416 Msa1220460:three_prime_UTR 45.0%
CGGAGATTCCAAGAAAGAGT+AGG + chr8_1:83654428-83654447 Msa1220460:three_prime_UTR 45.0%
CGTAGACGACTCATTCATTG+CGG - chr8_1:83654478-83654497 None:intergenic 45.0%
AGTCGTCTACGAGTTGTGAT+AGG + chr8_1:83654487-83654506 Msa1220460:three_prime_UTR 45.0%
GTCGTCTACGAGTTGTGATA+GGG + chr8_1:83654488-83654507 Msa1220460:three_prime_UTR 45.0%
! TCGATTGGTGTCCAAGAAGT+GGG + chr8_1:83654800-83654819 Msa1220460:three_prime_UTR 45.0%
GATTTGAATCAGCTGGAAGG+GGG - chr8_1:83654827-83654846 None:intergenic 45.0%
ATTCAAGAAGCTGCTTCTGC+TGG + chr8_1:83653204-83653223 Msa1220460:CDS 45.0%
GGACATGAAAGACGAAGTAG+TGG - chr8_1:83653631-83653650 None:intergenic 45.0%
TCTTTCATGTCCACCATCAC+CGG + chr8_1:83653639-83653658 Msa1220460:CDS 45.0%
AGCGTTTCCGATGGGAAAAT+CGG + chr8_1:83653669-83653688 Msa1220460:CDS 45.0%
!! GATAGGACCGATTTTCCCAT+CGG - chr8_1:83653679-83653698 None:intergenic 45.0%
ATCGGTCCTATCATTTCCTC+CGG + chr8_1:83653687-83653706 Msa1220460:CDS 45.0%
TTGCTTCATCTCACCGGAAA+AGG + chr8_1:83653721-83653740 Msa1220460:CDS 45.0%
!! ACTGCCATTGCTCTAAGAGA+AGG + chr8_1:83653787-83653806 Msa1220460:CDS 45.0%
! GCGACTTTTGAACTTATCGC+CGG - chr8_1:83653935-83653954 None:intergenic 45.0%
CTCCACGAAAATTCGTCTGA+TGG - chr8_1:83653965-83653984 None:intergenic 45.0%
! CATCAGACGAATTTTCGTGG+AGG + chr8_1:83653963-83653982 Msa1220460:CDS 45.0%
TGGTTAGGTTTGAGGGTGAT+CGG - chr8_1:83654043-83654062 None:intergenic 45.0%
TCGCCGTTTGCATTTGATGA+CGG + chr8_1:83654369-83654388 Msa1220460:three_prime_UTR 45.0%
TGCTGTAACCGTAACGGTAA+CGG + chr8_1:83654397-83654416 Msa1220460:three_prime_UTR 45.0%
CGGAGATTCCAAGAAAGAGT+AGG + chr8_1:83654428-83654447 Msa1220460:three_prime_UTR 45.0%
CGTAGACGACTCATTCATTG+CGG - chr8_1:83654478-83654497 None:intergenic 45.0%
AGTCGTCTACGAGTTGTGAT+AGG + chr8_1:83654487-83654506 Msa1220460:three_prime_UTR 45.0%
GTCGTCTACGAGTTGTGATA+GGG + chr8_1:83654488-83654507 Msa1220460:three_prime_UTR 45.0%
! TCGATTGGTGTCCAAGAAGT+GGG + chr8_1:83654800-83654819 Msa1220460:three_prime_UTR 45.0%
GATTTGAATCAGCTGGAAGG+GGG - chr8_1:83654827-83654846 None:intergenic 45.0%
!!! AGTTTTATTTATTTATTTAT+TGG + chr8_1:83654560-83654579 Msa1220460:three_prime_UTR 5.0%
!!! AGTTTTATTTATTTATTTAT+TGG + chr8_1:83654560-83654579 Msa1220460:three_prime_UTR 5.0%
ACGACGAAAACGAGCATGAC+CGG - chr8_1:83653397-83653416 None:intergenic 50.0%
TCCGGTGAGATGAAGCAAGA+GGG - chr8_1:83653719-83653738 None:intergenic 50.0%
TTCCGGTGAGATGAAGCAAG+AGG - chr8_1:83653720-83653739 None:intergenic 50.0%
! TGGCTTCGTGACACCTTTTC+CGG - chr8_1:83653737-83653756 None:intergenic 50.0%
CTTAGAGCAATGGCAGTGAC+CGG - chr8_1:83653784-83653803 None:intergenic 50.0%
CTTTCTACATGCTTCCTCGC+CGG - chr8_1:83654193-83654212 None:intergenic 50.0%
CTGAGATATGAATCCAGCGC+CGG - chr8_1:83654287-83654306 None:intergenic 50.0%
ATCAGCAGCGACGCTTAAAG+AGG - chr8_1:83654310-83654329 None:intergenic 50.0%
! CTTTAAGCGTCGCTGCTGAT+CGG + chr8_1:83654310-83654329 Msa1220460:exon 50.0%
! GTCGATTGGTGTCCAAGAAG+TGG + chr8_1:83654799-83654818 Msa1220460:three_prime_UTR 50.0%
ACGACGAAAACGAGCATGAC+CGG - chr8_1:83653397-83653416 None:intergenic 50.0%
TCCGGTGAGATGAAGCAAGA+GGG - chr8_1:83653719-83653738 None:intergenic 50.0%
TTCCGGTGAGATGAAGCAAG+AGG - chr8_1:83653720-83653739 None:intergenic 50.0%
! TGGCTTCGTGACACCTTTTC+CGG - chr8_1:83653737-83653756 None:intergenic 50.0%
CTTAGAGCAATGGCAGTGAC+CGG - chr8_1:83653784-83653803 None:intergenic 50.0%
CTTTCTACATGCTTCCTCGC+CGG - chr8_1:83654193-83654212 None:intergenic 50.0%
CTGAGATATGAATCCAGCGC+CGG - chr8_1:83654287-83654306 None:intergenic 50.0%
ATCAGCAGCGACGCTTAAAG+AGG - chr8_1:83654310-83654329 None:intergenic 50.0%
! CTTTAAGCGTCGCTGCTGAT+CGG + chr8_1:83654310-83654329 Msa1220460:exon 50.0%
! GTCGATTGGTGTCCAAGAAG+TGG + chr8_1:83654799-83654818 Msa1220460:three_prime_UTR 50.0%
ATGTCCACCATCACCGGAGA+CGG + chr8_1:83653645-83653664 Msa1220460:CDS 55.0%
ATCGGAAACGCTTCCGTCTC+CGG - chr8_1:83653661-83653680 None:intergenic 55.0%
!! GAGACGGAAGCGTTTCCGAT+GGG + chr8_1:83653661-83653680 Msa1220460:CDS 55.0%
GGCTTGCCGGAGGAAATGAT+AGG - chr8_1:83653696-83653715 None:intergenic 55.0%
CGGTGAGATGAAGCAAGAGG+GGG - chr8_1:83653717-83653736 None:intergenic 55.0%
CCGGTGAGATGAAGCAAGAG+GGG - chr8_1:83653718-83653737 None:intergenic 55.0%
CCCCTCTTGCTTCATCTCAC+CGG + chr8_1:83653715-83653734 Msa1220460:CDS 55.0%
TGTCACGAAGCCACCATCTC+CGG + chr8_1:83653744-83653763 Msa1220460:CDS 55.0%
TGAGACTTTGCCGGAGATGG+TGG - chr8_1:83653757-83653776 None:intergenic 55.0%
GGATGAGACTTTGCCGGAGA+TGG - chr8_1:83653760-83653779 None:intergenic 55.0%
TCCGGCAAAGTCTCATCCTC+CGG + chr8_1:83653762-83653781 Msa1220460:CDS 55.0%
ACCGGAGGATGAGACTTTGC+CGG - chr8_1:83653766-83653785 None:intergenic 55.0%
GTGACGGTGCTCTCCTTCAT+AGG - chr8_1:83654248-83654267 None:intergenic 55.0%
! TTACGACGGTTTGGGCGTGA+CGG - chr8_1:83654264-83654283 None:intergenic 55.0%
ATGTCCACCATCACCGGAGA+CGG + chr8_1:83653645-83653664 Msa1220460:CDS 55.0%
ATCGGAAACGCTTCCGTCTC+CGG - chr8_1:83653661-83653680 None:intergenic 55.0%
!! GAGACGGAAGCGTTTCCGAT+GGG + chr8_1:83653661-83653680 Msa1220460:CDS 55.0%
GGCTTGCCGGAGGAAATGAT+AGG - chr8_1:83653696-83653715 None:intergenic 55.0%
CGGTGAGATGAAGCAAGAGG+GGG - chr8_1:83653717-83653736 None:intergenic 55.0%
CCGGTGAGATGAAGCAAGAG+GGG - chr8_1:83653718-83653737 None:intergenic 55.0%
CCCCTCTTGCTTCATCTCAC+CGG + chr8_1:83653715-83653734 Msa1220460:CDS 55.0%
TGTCACGAAGCCACCATCTC+CGG + chr8_1:83653744-83653763 Msa1220460:CDS 55.0%
TGAGACTTTGCCGGAGATGG+TGG - chr8_1:83653757-83653776 None:intergenic 55.0%
GGATGAGACTTTGCCGGAGA+TGG - chr8_1:83653760-83653779 None:intergenic 55.0%
TCCGGCAAAGTCTCATCCTC+CGG + chr8_1:83653762-83653781 Msa1220460:CDS 55.0%
ACCGGAGGATGAGACTTTGC+CGG - chr8_1:83653766-83653785 None:intergenic 55.0%
GTGACGGTGCTCTCCTTCAT+AGG - chr8_1:83654248-83654267 None:intergenic 55.0%
! TTACGACGGTTTGGGCGTGA+CGG - chr8_1:83654264-83654283 None:intergenic 55.0%
AACGCTTCCGTCTCCGGTGA+TGG - chr8_1:83653655-83653674 None:intergenic 60.0%
!! GGAGACGGAAGCGTTTCCGA+TGG + chr8_1:83653660-83653679 Msa1220460:CDS 60.0%
TGAAGCAAGAGGGGGCTTGC+CGG - chr8_1:83653709-83653728 None:intergenic 60.0%
AGAGCAATGGCAGTGACCGG+AGG - chr8_1:83653781-83653800 None:intergenic 60.0%
GCTTCAAAGGATGTCCGGCG+AGG + chr8_1:83654176-83654195 Msa1220460:CDS 60.0%
CACGCCCAAACCGTCGTAAC+CGG + chr8_1:83654265-83654284 Msa1220460:CDS 60.0%
!! AGCGCCGGTTACGACGGTTT+GGG - chr8_1:83654272-83654291 None:intergenic 60.0%
!! GAATCCAGCGCCGGTTACGA+CGG - chr8_1:83654278-83654297 None:intergenic 60.0%
TGGAAGGGGGACCCACTTCT+TGG - chr8_1:83654814-83654833 None:intergenic 60.0%
AACGCTTCCGTCTCCGGTGA+TGG - chr8_1:83653655-83653674 None:intergenic 60.0%
!! GGAGACGGAAGCGTTTCCGA+TGG + chr8_1:83653660-83653679 Msa1220460:CDS 60.0%
TGAAGCAAGAGGGGGCTTGC+CGG - chr8_1:83653709-83653728 None:intergenic 60.0%
AGAGCAATGGCAGTGACCGG+AGG - chr8_1:83653781-83653800 None:intergenic 60.0%
GCTTCAAAGGATGTCCGGCG+AGG + chr8_1:83654176-83654195 Msa1220460:CDS 60.0%
CACGCCCAAACCGTCGTAAC+CGG + chr8_1:83654265-83654284 Msa1220460:CDS 60.0%
!! AGCGCCGGTTACGACGGTTT+GGG - chr8_1:83654272-83654291 None:intergenic 60.0%
!! GAATCCAGCGCCGGTTACGA+CGG - chr8_1:83654278-83654297 None:intergenic 60.0%
TGGAAGGGGGACCCACTTCT+TGG - chr8_1:83654814-83654833 None:intergenic 60.0%
! GCTTCCGTCTCCGGTGATGG+TGG - chr8_1:83653652-83653671 None:intergenic 65.0%
!! CAGCGCCGGTTACGACGGTT+TGG - chr8_1:83654273-83654292 None:intergenic 65.0%
CAAACCGTCGTAACCGGCGC+TGG + chr8_1:83654271-83654290 Msa1220460:CDS 65.0%
! GCTTCCGTCTCCGGTGATGG+TGG - chr8_1:83653652-83653671 None:intergenic 65.0%
!! CAGCGCCGGTTACGACGGTT+TGG - chr8_1:83654273-83654292 None:intergenic 65.0%
CAAACCGTCGTAACCGGCGC+TGG + chr8_1:83654271-83654290 Msa1220460:CDS 65.0%
AGCAAGAGGGGGCTTGCCGG+AGG - chr8_1:83653706-83653725 None:intergenic 70.0%
AGCAAGAGGGGGCTTGCCGG+AGG - chr8_1:83653706-83653725 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 83653050 83654956 83653050 ID=Msa1220460;Name=Msa1220460
chr8_1 mRNA 83653050 83654956 83653050 ID=Msa1220460-mRNA-1;Parent=Msa1220460;Name=Msa1220460-mRNA-1;_AED=0.04;_eAED=0.04;_QI=100|1|1|1|1|1|3|641|314
chr8_1 exon 83653050 83653808 83653050 ID=Msa1220460-mRNA-1:exon:29966;Parent=Msa1220460-mRNA-1
chr8_1 exon 83653901 83654026 83653901 ID=Msa1220460-mRNA-1:exon:29967;Parent=Msa1220460-mRNA-1
chr8_1 exon 83654156 83654956 83654156 ID=Msa1220460-mRNA-1:exon:29968;Parent=Msa1220460-mRNA-1
chr8_1 five_prime_UTR 83653050 83653149 83653050 ID=Msa1220460-mRNA-1:five_prime_utr;Parent=Msa1220460-mRNA-1
chr8_1 CDS 83653150 83653808 83653150 ID=Msa1220460-mRNA-1:cds;Parent=Msa1220460-mRNA-1
chr8_1 CDS 83653901 83654026 83653901 ID=Msa1220460-mRNA-1:cds;Parent=Msa1220460-mRNA-1
chr8_1 CDS 83654156 83654315 83654156 ID=Msa1220460-mRNA-1:cds;Parent=Msa1220460-mRNA-1
chr8_1 three_prime_UTR 83654316 83654956 83654316 ID=Msa1220460-mRNA-1:three_prime_utr;Parent=Msa1220460-mRNA-1
Gene Sequence

>Msa1220460

ATGGTTGTAGATCCGGTAATGATTCCAAAGATGAGGATGGATGAACAAAGAGCTATTCAAGAAGCTGCTTCTGCTGGATTGAAAAGTATGGAGCAACTAATTCACGTGCTTTCTTCTCAAACTTCATCTTCTTGTTCTTCAAATCAACGTAACCAACTAGATCTGGTTAATAAACTTGATTGTACTGAAATTACTGATTTCACTGTTTCTAAGTTTAAAACGGTTATTAACTTGTTAAATCGTACCGGTCATGCTCGTTTTCGTCGTTCTCCTTGTTCTTCTTCTCAATTTCAATCTCTTATTCAACCTGAGAAATTCAAGATTCAACCACAGTCAACTACTCTTGATTTTGCAAAACCGATCCAATTAGTCATGTCAAATCCAAATCCAAATCCCAATCTCAAACCTAAAACTAATCAATCTACTGATTTATCTGTTTCTCAATACTCCAAATCAAAGGAAGCTTATAGCATCTCTACCACTACTTCGTCTTTCATGTCCACCATCACCGGAGACGGAAGCGTTTCCGATGGGAAAATCGGTCCTATCATTTCCTCCGGCAAGCCCCCTCTTGCTTCATCTCACCGGAAAAGGTGTCACGAAGCCACCATCTCCGGCAAAGTCTCATCCTCCGGTCACTGCCATTGCTCTAAGAGAAGGAAATCTCGTGTGAAGAGAACAATTCGTGTTCCGGCGATAAGTTCAAAAGTCGCTGATATTCCATCAGACGAATTTTCGTGGAGGAAATACGGTCAAAAACCTATTAAAGGTTCACCTTACCCACGTGGTTACTATAAGTGTAGTAGCTTCAAAGGATGTCCGGCGAGGAAGCATGTAGAAAGAGCACAAGACGATCCCAATATGCTTGTTGTTACCTATGAAGGAGAGCACCGTCACGCCCAAACCGTCGTAACCGGCGCTGGATTCATATCTCAGCCTCTTTAA
Protein sequence

>Msa1220460

MVVDPVMIPKMRMDEQRAIQEAASAGLKSMEQLIHVLSSQTSSSCSSNQRNQLDLVNKLDCTEITDFTVSKFKTVINLLNRTGHARFRRSPCSSSQFQSLIQPEKFKIQPQSTTLDFAKPIQLVMSNPNPNPNLKPKTNQSTDLSVSQYSKSKEAYSISTTTSSFMSTITGDGSVSDGKIGPIISSGKPPLASSHRKRCHEATISGKVSSSGHCHCSKRRKSRVKRTIRVPAISSKVADIPSDEFSWRKYGQKPIKGSPYPRGYYKCSSFKGCPARKHVERAQDDPNMLVVTYEGEHRHAQTVVTGAGFISQPL*