AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0316410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0316410 MtrunA17_Chr2g0288571 98.258 287 5 0 1 287 1 287 0.0 580
Msa0316410 MtrunA17_Chr4g0075021 79.710 276 56 0 12 287 7 282 6.40e-167 464
Msa0316410 MtrunA17_Chr8g0390251 72.887 284 72 2 4 287 69 347 2.39e-155 437
Msa0316410 MtrunA17_Chr4g0075001 76.800 250 58 0 38 287 16 265 4.54e-145 408
Msa0316410 MtrunA17_Chr4g0075001 47.107 121 60 1 22 138 130 250 2.78e-28 109
Msa0316410 MtrunA17_Chr3g0140091 67.845 283 87 1 5 287 72 350 2.19e-141 402
Msa0316410 MtrunA17_Chr6g0486631 65.957 282 90 2 6 287 73 348 1.01e-140 400
Msa0316410 MtrunA17_Chr4g0019621 66.932 251 74 2 37 287 7 248 1.49e-120 345
Msa0316410 MtrunA17_Chr4g0019621 55.556 117 47 1 22 138 122 233 4.46e-35 127
Msa0316410 MtrunA17_Chr4g0028391 31.544 149 75 5 24 147 79 225 1.30e-14 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0316410 AT1G11840.6 79.443 287 55 1 1 287 40 322 1.90e-175 487
Msa0316410 AT1G11840.4 79.443 287 55 1 1 287 1 283 3.55e-175 485
Msa0316410 AT1G11840.1 79.443 287 55 1 1 287 1 283 3.55e-175 485
Msa0316410 AT1G11840.3 79.443 287 55 1 1 287 1 283 3.55e-175 485
Msa0316410 AT1G11840.2 79.443 287 55 1 1 287 1 283 3.55e-175 485
Msa0316410 AT1G67280.1 72.028 286 76 1 2 287 69 350 1.12e-154 436
Msa0316410 AT1G67280.2 73.684 266 66 1 22 287 1 262 5.35e-147 413
Msa0316410 AT1G11840.5 79.204 226 43 1 1 226 1 222 4.04e-134 379
Msa0316410 AT1G11840.5 42.857 126 68 1 152 277 18 139 8.58e-27 105
Msa0316410 AT1G08110.3 30.345 145 74 4 24 143 30 172 1.59e-12 65.1
Msa0316410 AT1G08110.2 30.345 145 74 4 24 143 30 172 1.59e-12 65.1
Msa0316410 AT1G08110.1 30.345 145 74 4 24 143 30 172 1.59e-12 65.1
Msa0316410 AT1G08110.4 30.345 145 74 4 24 143 80 222 3.49e-12 65.1

Find 101 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAACAAAATTGGATGTTTC+TGG 0.199625 2_4:+13518100 None:intergenic
AGAAAATGAGTCAGTTATTT+CGG 0.220403 2_4:-13519176 Msa0316410:intron
TATGATATTGGAACCGGTTT+TGG 0.238354 2_4:-13517900 Msa0316410:CDS
AGTTAACTCCACAACAAAAT+TGG 0.252462 2_4:+13518090 None:intergenic
AACCTAGCCACTCAAGAATT+TGG 0.269445 2_4:-13515671 Msa0316410:CDS
ATTTGTACTCACATTGAATA+TGG 0.278079 2_4:-13518404 Msa0316410:exon
GAAAATGAGTCAGTTATTTC+GGG 0.303023 2_4:-13519175 Msa0316410:intron
ACACTTGTCCCGCCACTAAC+TGG 0.306497 2_4:+13517704 None:intergenic
ACAGGTGTTGGTTGACAATC+AGG 0.319463 2_4:-13512667 Msa0316410:intron
AGGCAACCAGGGCCAATTCC+TGG 0.339757 2_4:-13515635 Msa0316410:CDS
TGACTTTATCATCAGATTAT+GGG 0.343251 2_4:-13517932 Msa0316410:intron
AGCCATACCGAATACTATTA+TGG 0.354174 2_4:+13512526 None:intergenic
CGAAGCATTACTTGGCATAA+TGG 0.359164 2_4:+13517614 None:intergenic
ACAACCTAATGCTGAGCTAT+TGG 0.378542 2_4:-13518371 Msa0316410:CDS
CATTCCAATAGCTCAGCATT+AGG 0.379458 2_4:+13518367 None:intergenic
AGGAATTGGCCCTGGTTGCC+TGG 0.388603 2_4:+13515637 None:intergenic
CGGGACGGAGTTACGGGTTA+TGG 0.388805 2_4:+13519483 None:intergenic
CTGCATCGGGACGGAGTTAC+GGG 0.388938 2_4:+13519477 None:intergenic
ACAAATTTGTTGAAGACGTC+CGG 0.389313 2_4:-13517760 Msa0316410:CDS
GCTCAGGGGTAGAAGCTCTT+TGG 0.394805 2_4:+13517636 None:intergenic
GACAAGTGTTATTGCCTTTG+TGG 0.403421 2_4:-13517690 Msa0316410:CDS
CAACAAAATTGGATGTTTCT+GGG 0.414735 2_4:+13518101 None:intergenic
TTTGTGTTGAGGCCAGGAAT+TGG 0.429061 2_4:+13515623 None:intergenic
ACAGGCTTTGGGTTTGAAGC+TGG 0.434411 2_4:-13516087 Msa0316410:intron
ACTGCATCGGGACGGAGTTA+CGG 0.438877 2_4:+13519476 None:intergenic
ACCTCGTATGATATTGGAAC+CGG 0.439234 2_4:-13517906 Msa0316410:CDS
CTGCATGCTGTTTACCGTGT+TGG 0.440891 2_4:-13518319 Msa0316410:CDS
TGTTGAAGACGTCCGGGCTA+AGG 0.442242 2_4:-13517753 Msa0316410:CDS
GCATTGGCATATTTCTCCTC+TGG 0.451229 2_4:+13518139 None:intergenic
GTTATCACCATAATAGTATT+CGG 0.453121 2_4:-13512533 Msa0316410:three_prime_UTR
CACCAACACGAAGCATTACT+TGG 0.453214 2_4:+13517606 None:intergenic
GGGGTGACCTCGTATGATAT+TGG 0.454901 2_4:-13517912 Msa0316410:CDS
CAGTACACTTTAGCTATGCT+TGG 0.464573 2_4:-13515924 Msa0316410:CDS
AGGGAGCCTGGTCCAGTTAG+TGG 0.466212 2_4:-13517716 Msa0316410:CDS
ATTACTTGGCATAATGGCTC+AGG 0.466397 2_4:+13517620 None:intergenic
CTCCAAATTCTTGAGTGGCT+AGG 0.475358 2_4:+13515669 None:intergenic
GGAAAAGTCACTAGGGAGCC+TGG 0.483177 2_4:-13517728 Msa0316410:CDS
ACAATCTTTGTGTTGAGGCC+AGG 0.484223 2_4:+13515617 None:intergenic
TAATGCTGAGCTATTGGAAT+GGG 0.497082 2_4:-13518365 Msa0316410:CDS
AAGAAGAATCTAGAAAATGA+AGG 0.502457 2_4:+13519128 None:intergenic
CACCATAATAGTATTCGGTA+TGG 0.505464 2_4:-13512528 Msa0316410:three_prime_UTR
TTGAGGCCAGGAATTGGCCC+TGG 0.507618 2_4:+13515629 None:intergenic
AGTACACTTTAGCTATGCTT+GGG 0.511040 2_4:-13515923 Msa0316410:CDS
GGGAAGATTACCAGGCAACC+AGG 0.511775 2_4:-13515647 Msa0316410:CDS
GATAGCAAAATGTCCAAAAC+CGG 0.515080 2_4:+13517887 None:intergenic
TTGGAGCTGACATATAACTA+TGG 0.519451 2_4:-13515873 Msa0316410:CDS
CGTTACTCTCACTCACTCAC+TGG 0.519612 2_4:-13519091 Msa0316410:intron
CTTTGGGTTTGAAGCTGGTG+AGG 0.526621 2_4:-13516082 Msa0316410:CDS
GGTAAACAGCATGCAGGAAG+CGG 0.528573 2_4:+13518326 None:intergenic
GTTGAAGACGTCCGGGCTAA+GGG 0.529662 2_4:-13517752 Msa0316410:CDS
AATTTGGAGGGAAGATTACC+AGG 0.531624 2_4:-13515655 Msa0316410:CDS
CTAAGGGTGGAAAAGTCACT+AGG 0.534888 2_4:-13517736 Msa0316410:CDS
AGACGATATTGAACAGCAGT+TGG 0.534915 2_4:-13512443 Msa0316410:three_prime_UTR
AAGAAACAATCTTTGTGTTG+AGG 0.535327 2_4:+13515612 None:intergenic
TGTGAGTTAGTGACTGCATC+GGG 0.537139 2_4:+13519464 None:intergenic
CTTTCTTAGATCCAGATGGA+TGG 0.549136 2_4:-13515592 Msa0316410:CDS
GACTTTATCATCAGATTATG+GGG 0.550340 2_4:-13517931 Msa0316410:intron
GCCAAATCCAAGAAAAGCAT+TGG 0.551778 2_4:+13518123 None:intergenic
TGTATATAACAGGTTGCTGT+TGG 0.553878 2_4:-13515728 Msa0316410:intron
AGTGGCTAGGTTGACTAACT+CGG 0.554344 2_4:+13515682 None:intergenic
GGAACTGGAGTGAAGTGTGC+TGG 0.554747 2_4:-13512634 Msa0316410:exon
AGCCTGGTCCAGTTAGTGGC+GGG 0.557239 2_4:-13517712 Msa0316410:CDS
GCCTTTGTGGCAGATCCTGA+TGG 0.566784 2_4:-13517677 Msa0316410:CDS
GTTTCTTTCTTAGATCCAGA+TGG 0.569571 2_4:-13515596 Msa0316410:CDS
AAGGAGCTCACCTTGTATTG+AGG 0.572668 2_4:+13516047 None:intergenic
CTAGCCACTCAAGAATTTGG+AGG 0.575204 2_4:-13515668 Msa0316410:CDS
GGAGCACGAGACCATTGTGT+TGG 0.578325 2_4:-13515892 Msa0316410:CDS
GAGCCTGGTCCAGTTAGTGG+CGG 0.580023 2_4:-13517713 Msa0316410:CDS
CTAATGCTGAGCTATTGGAA+TGG 0.580969 2_4:-13518366 Msa0316410:CDS
CAAATTTGTTGAAGACGTCC+GGG 0.584145 2_4:-13517759 Msa0316410:CDS
CTTCCCTCCAAATTCTTGAG+TGG 0.585863 2_4:+13515664 None:intergenic
TTTGTTCTCTACTCAAATCG+TGG 0.586461 2_4:-13512491 Msa0316410:three_prime_UTR
GGGTTTGAAGCTGGTGAGGA+CGG 0.590754 2_4:-13516078 Msa0316410:CDS
TTACTTGGCATAATGGCTCA+GGG 0.593859 2_4:+13517621 None:intergenic
CAAGGGAAATGCTTATGCAC+AGG 0.595183 2_4:-13515835 Msa0316410:intron
GTCCCGCCACTAACTGGACC+AGG 0.596237 2_4:+13517710 None:intergenic
CTGTGCATAAGCATTTCCCT+TGG 0.599109 2_4:+13515836 None:intergenic
GACGGAGTTACGGGTTATGG+TGG 0.611611 2_4:+13519486 None:intergenic
GGAAGATTACCAGGCAACCA+GGG 0.624129 2_4:-13515646 Msa0316410:CDS
ACCATCAGGATCTGCCACAA+AGG 0.628314 2_4:+13517676 None:intergenic
ACTCACATTGAATATGGCTG+AGG 0.630738 2_4:-13518398 Msa0316410:exon
GAAGACGTCCGGGCTAAGGG+TGG 0.630896 2_4:-13517749 Msa0316410:CDS
TAGCCACTCAAGAATTTGGA+GGG 0.631555 2_4:-13515667 Msa0316410:CDS
GATTAGAAAACATAACTACA+AGG 0.635790 2_4:+13512380 None:intergenic
GGTTGATAGACCTCAATACA+AGG 0.639705 2_4:-13516057 Msa0316410:intron
CAACACGGTAAACAGCATGC+AGG 0.641511 2_4:+13518320 None:intergenic
AGTTAGTGACTGCATCGGGA+CGG 0.646528 2_4:+13519468 None:intergenic
TGAGTGAGTGAGAGTAACGG+AGG 0.651180 2_4:+13519095 None:intergenic
CAGTGAGTGAGTGAGAGTAA+CGG 0.652559 2_4:+13519092 None:intergenic
AAGAATCTAGAAAATGAAGG+AGG 0.653716 2_4:+13519131 None:intergenic
AGCTATGCTTGGGTACGCAG+AGG 0.657919 2_4:-13515913 Msa0316410:CDS
TGCCAAGTAATGCTTCGTGT+TGG 0.659311 2_4:-13517608 Msa0316410:CDS
TAGAGCAAGTACTGTGTACG+TGG 0.667563 2_4:+13519433 None:intergenic
TTGTGAGTTAGTGACTGCAT+CGG 0.676863 2_4:+13519463 None:intergenic
ATATGTCAGCTCCAACACAA+TGG 0.688196 2_4:+13515881 None:intergenic
TAAGGGTGGAAAAGTCACTA+GGG 0.688812 2_4:-13517735 Msa0316410:CDS
GGTGTCACTGAATACACCAA+GGG 0.689964 2_4:-13515852 Msa0316410:CDS
TGGTGTCACTGAATACACCA+AGG 0.696706 2_4:-13515853 Msa0316410:CDS
TACTTGGCATAATGGCTCAG+GGG 0.711313 2_4:+13517622 None:intergenic
TACGATCAAGATCACCAACA+CGG 0.718693 2_4:+13518305 None:intergenic
ACCGGTTCCAATATCATACG+AGG 0.719788 2_4:+13517905 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAATTTATAAAATTTAAGT+GGG + chr2_4:13514402-13514421 None:intergenic 10.0%
!! TTCAATTTATAAAATTTAAG+TGG + chr2_4:13514403-13514422 None:intergenic 10.0%
!!! TTTTATTTTTTTTAGAAGAA+TGG - chr2_4:13515530-13515549 Msa0316410:intron 10.0%
!!! TTTATTTTTTTTAGAAGAAT+GGG - chr2_4:13515531-13515550 Msa0316410:intron 10.0%
!! ATAATTATTTGTTTAAGAAA+AGG - chr2_4:13517028-13517047 Msa0316410:intron 10.0%
!! TAATTATTTGTTTAAGAAAA+GGG - chr2_4:13517029-13517048 Msa0316410:intron 10.0%
!!! ATAAATTTTTTCTTCATTTT+GGG + chr2_4:13518593-13518612 None:intergenic 10.0%
!!! TATAAATTTTTTCTTCATTT+TGG + chr2_4:13518594-13518613 None:intergenic 10.0%
!! AAATGAAGAAAAAATTTATA+TGG - chr2_4:13518594-13518613 Msa0316410:intron 10.0%
!! AATGAAGAAAAAATTTATAT+GGG - chr2_4:13518595-13518614 Msa0316410:intron 10.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr2_4:13512526-13512545 Msa0316410:three_prime_UTR 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr2_4:13512527-13512546 Msa0316410:three_prime_UTR 15.0%
!! AAATGATAAGAAAAGAAAAA+AGG + chr2_4:13513239-13513258 None:intergenic 15.0%
!! GACATATTAAATTATAACTA+TGG - chr2_4:13513371-13513390 Msa0316410:intron 15.0%
!! ATAAATGTTAAATTTCAGTA+AGG + chr2_4:13514779-13514798 None:intergenic 15.0%
!!! ATCTATTATTTATTTTTGCT+TGG - chr2_4:13515101-13515120 Msa0316410:intron 15.0%
!!! ATCTAAAAGTTTAACTTATT+AGG - chr2_4:13515395-13515414 Msa0316410:intron 15.0%
!!! AGTTAACAAAATAACAATTT+TGG + chr2_4:13515683-13515702 None:intergenic 15.0%
!! TTATTTATTTGCAAATCAAA+CGG + chr2_4:13516327-13516346 None:intergenic 15.0%
!! AAATAAATAAAAGATTTGAC+TGG - chr2_4:13516337-13516356 Msa0316410:intron 15.0%
!! TACACTATTCAAATAAAAAA+AGG + chr2_4:13516378-13516397 None:intergenic 15.0%
!!! TATGGTTTGAATATTTTTTT+TGG - chr2_4:13518199-13518218 Msa0316410:intron 15.0%
!! TTATCAACTGAAAATATTAA+AGG + chr2_4:13518796-13518815 None:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATGA+AGG - chr2_4:13512461-13512480 Msa0316410:three_prime_UTR 20.0%
!!! AAGAAAAGTGTATAAATGAA+GGG - chr2_4:13512462-13512481 Msa0316410:three_prime_UTR 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr2_4:13512559-13512578 Msa0316410:three_prime_UTR 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr2_4:13512596-13512615 Msa0316410:three_prime_UTR 20.0%
!! CATAGTTTCATCATAATTAA+AGG + chr2_4:13512914-13512933 None:intergenic 20.0%
!!! ACAATAAGTTTTTGTGAATT+TGG - chr2_4:13513090-13513109 Msa0316410:intron 20.0%
!!! TAAATTATAACTATGGCTTT+TGG - chr2_4:13513378-13513397 Msa0316410:intron 20.0%
!!! CTCAATTAAGTTTTATGAAA+AGG - chr2_4:13514247-13514266 Msa0316410:intron 20.0%
!! ATTTCTATCATAATTCTTAC+AGG - chr2_4:13514327-13514346 Msa0316410:intron 20.0%
!!! ATCATTTCATTTTGATCTTA+GGG + chr2_4:13514547-13514566 None:intergenic 20.0%
!!! TATCATTTCATTTTGATCTT+AGG + chr2_4:13514548-13514567 None:intergenic 20.0%
!! AATGATTTACTTGTAAATCA+GGG + chr2_4:13514593-13514612 None:intergenic 20.0%
!! TAAACATTGTCAACATTAAA+AGG + chr2_4:13514743-13514762 None:intergenic 20.0%
!! ATTTATCTAGAAAAATGTGA+GGG - chr2_4:13514793-13514812 Msa0316410:intron 20.0%
!!! ACATAATAAATCGATGTTTT+AGG + chr2_4:13514881-13514900 None:intergenic 20.0%
!!! ATATCTCTATTATTTTTGCT+TGG - chr2_4:13514922-13514941 Msa0316410:intron 20.0%
!!! ACATAATAAATCGATGTTTT+AGG + chr2_4:13514881-13514900 None:intergenic 20.0%
!! AAAAAATCATAAGCAAAACA+TGG + chr2_4:13515853-13515872 None:intergenic 20.0%
!! TAAAAGTTAAACACAGAAAA+AGG + chr2_4:13516277-13516296 None:intergenic 20.0%
!!! TTTAACTTTTATGTTGAGTA+AGG - chr2_4:13516286-13516305 Msa0316410:intron 20.0%
!! ATAGATCATGTGTAATAAAT+AGG + chr2_4:13516513-13516532 None:intergenic 20.0%
!! CTATCTACATATATAACTTA+TGG - chr2_4:13516558-13516577 Msa0316410:intron 20.0%
!! CTAAAATAATTGGTGAATTA+TGG - chr2_4:13516800-13516819 Msa0316410:intron 20.0%
!! GTAGATATCAAATTACTAAT+TGG - chr2_4:13518357-13518376 Msa0316410:CDS 20.0%
!! AGATCAAGTAAATGTTATAA+TGG + chr2_4:13518424-13518443 None:intergenic 20.0%
!! AGAAAAAATTTATATGGGTT+TGG - chr2_4:13518600-13518619 Msa0316410:intron 20.0%
!! AGTATAAAAATTACATTCTC+TGG + chr2_4:13518717-13518736 None:intergenic 20.0%
!!! CAATATTTTCGTCTAATTAT+TGG - chr2_4:13518844-13518863 Msa0316410:intron 20.0%
!! TCTCAATATTAAAACATGAA+TGG + chr2_4:13518884-13518903 None:intergenic 20.0%
!! GATAGAATCAAAATCTTAAT+TGG + chr2_4:13518981-13519000 None:intergenic 20.0%
!! AGAAAAGTGTATAAATGAAG+GGG - chr2_4:13512463-13512482 Msa0316410:three_prime_UTR 25.0%
!!! TGAAATGGATCAGTTATTTT+AGG - chr2_4:13512574-13512593 Msa0316410:three_prime_UTR 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr2_4:13512595-13512614 Msa0316410:three_prime_UTR 25.0%
! AGAAAATGAGTCAGTTATTT+CGG - chr2_4:13512644-13512663 Msa0316410:CDS 25.0%
! AAGAAGAATCTAGAAAATGA+AGG + chr2_4:13512695-13512714 None:intergenic 25.0%
! AACACTGTAATTAACATGAT+CGG + chr2_4:13512886-13512905 None:intergenic 25.0%
! TTACATCAATGAATCATAGT+AGG - chr2_4:13513012-13513031 Msa0316410:intron 25.0%
! CATTTATTATCAAACAGTGT+TGG - chr2_4:13513254-13513273 Msa0316410:intron 25.0%
! GCATTATACAAATAGTGTAA+CGG + chr2_4:13513318-13513337 None:intergenic 25.0%
!! TACTGATTATGCTATTTACT+CGG - chr2_4:13513339-13513358 Msa0316410:intron 25.0%
! ATTTGTACTCACATTGAATA+TGG - chr2_4:13513416-13513435 Msa0316410:intron 25.0%
! TCAATCAAACATGCAATAAA+TGG + chr2_4:13513847-13513866 None:intergenic 25.0%
! ATGTTTGATTGAATTTGACA+TGG - chr2_4:13513855-13513874 Msa0316410:intron 25.0%
! ATGACTTTATCATCAGATTA+TGG - chr2_4:13513887-13513906 Msa0316410:intron 25.0%
! TGACTTTATCATCAGATTAT+GGG - chr2_4:13513888-13513907 Msa0316410:intron 25.0%
! CGTCAATTTCAGTATAAAAA+GGG + chr2_4:13514014-13514033 None:intergenic 25.0%
! ACGTCAATTTCAGTATAAAA+AGG + chr2_4:13514015-13514034 None:intergenic 25.0%
! ATTTCAAAAAGATAACCATC+AGG + chr2_4:13514161-13514180 None:intergenic 25.0%
! ATCAAAAGAACAAATTGACT+TGG + chr2_4:13514279-13514298 None:intergenic 25.0%
! AAGGTTAAATGTACAGAAAA+GGG + chr2_4:13514479-13514498 None:intergenic 25.0%
! AAAGGTTAAATGTACAGAAA+AGG + chr2_4:13514480-13514499 None:intergenic 25.0%
! GAATGATTTACTTGTAAATC+AGG + chr2_4:13514594-13514613 None:intergenic 25.0%
! CATTTATCTAGAAAAATGTG+AGG - chr2_4:13514792-13514811 Msa0316410:intron 25.0%
! AGGGATTAAGATTTAATTCT+AGG - chr2_4:13514812-13514831 Msa0316410:intron 25.0%
! AGATTTAATTCTAGGTAAGT+TGG - chr2_4:13514820-13514839 Msa0316410:intron 25.0%
!! TAGTTTATAGCATGTTACTT+GGG + chr2_4:13514853-13514872 None:intergenic 25.0%
! TTAGTTTATAGCATGTTACT+TGG + chr2_4:13514854-13514873 None:intergenic 25.0%
!!! AACATCGATTTATTATGTGA+AGG - chr2_4:13514883-13514902 Msa0316410:intron 25.0%
!!! AACATCGATTTATTATGTGA+AGG - chr2_4:13514883-13514902 Msa0316410:intron 25.0%
! TAAAAATCTCTTTCATCGAT+TGG - chr2_4:13515216-13515235 Msa0316410:intron 25.0%
!! TAGTATCAGAAATCTAGAAT+GGG - chr2_4:13515284-13515303 Msa0316410:intron 25.0%
! TATTAGGTAAAGTGCATAAA+TGG - chr2_4:13515411-13515430 Msa0316410:intron 25.0%
! AAAAAATTCAGCACAAAGTT+GGG + chr2_4:13515514-13515533 None:intergenic 25.0%
! TAAAAAATTCAGCACAAAGT+TGG + chr2_4:13515515-13515534 None:intergenic 25.0%
!!! TTTCTAAGATCAGTTAAGAA+AGG + chr2_4:13515795-13515814 None:intergenic 25.0%
! TGATCTTAGAAATCTACATA+CGG - chr2_4:13515803-13515822 Msa0316410:intron 25.0%
! CAAAGATACTAAGACATTAA+GGG + chr2_4:13516764-13516783 None:intergenic 25.0%
! ATGTAATATGCATAACATGT+AGG - chr2_4:13517054-13517073 Msa0316410:intron 25.0%
! ACGACCTAAAAATTTAAGTA+CGG + chr2_4:13517301-13517320 None:intergenic 25.0%
! TTGAATATTCTTAACGATAC+AGG - chr2_4:13518009-13518028 Msa0316410:intron 25.0%
! TGAATATTCTTAACGATACA+GGG - chr2_4:13518010-13518029 Msa0316410:intron 25.0%
! CAAAAAAATATAGAAGACTC+CGG - chr2_4:13518069-13518088 Msa0316410:intron 25.0%
! TTCGATAAAAGAATAGTCAT+GGG - chr2_4:13518095-13518114 Msa0316410:CDS 25.0%
! AAATATTCAAACCATAAACC+AGG + chr2_4:13518195-13518214 None:intergenic 25.0%
!!! TTACTATAGATGTTTTGACA+AGG + chr2_4:13518227-13518246 None:intergenic 25.0%
! ACATCTATAGTAAAACAGAT+TGG - chr2_4:13518234-13518253 Msa0316410:intron 25.0%
! TCTCAATGAGAAAAAAATGA+AGG - chr2_4:13518300-13518319 Msa0316410:CDS 25.0%
! ATGAGAAAAAAATGAAGGTA+AGG - chr2_4:13518305-13518324 Msa0316410:CDS 25.0%
! TGAGAAAAAAATGAAGGTAA+GGG - chr2_4:13518306-13518325 Msa0316410:CDS 25.0%
! ATCAAATTACTAATTGGTCA+AGG - chr2_4:13518363-13518382 Msa0316410:CDS 25.0%
! AATATGAACCTTATGAAAAG+AGG + chr2_4:13518645-13518664 None:intergenic 25.0%
! TTCATAAGGTTCATATTAGA+AGG - chr2_4:13518648-13518667 Msa0316410:intron 25.0%
!! CTAAACATCTTTTATACCAT+GGG + chr2_4:13518694-13518713 None:intergenic 25.0%
! TTAAAACATGAATGGCAAAA+AGG + chr2_4:13518876-13518895 None:intergenic 25.0%
! AATTGTGCTTTAGTATAAGA+AGG - chr2_4:13518916-13518935 Msa0316410:intron 25.0%
! ATCCACTTAAAAAAAACGTT+TGG - chr2_4:13519008-13519027 Msa0316410:intron 25.0%
!! TCATTTTGTATGCATTTTAC+AGG - chr2_4:13519135-13519154 Msa0316410:five_prime_UTR 25.0%
! GTTATCACCATAATAGTATT+CGG - chr2_4:13519287-13519306 Msa0316410:intron 25.0%
! GATTAGAAAACATAACTACA+AGG + chr2_4:13519443-13519462 None:intergenic 25.0%
TCAAAGTAGGTCAATTATAC+CGG + chr2_4:13512427-13512446 None:intergenic 30.0%
TCTGTGTGAAAAATCAAAGT+AGG + chr2_4:13512440-13512459 None:intergenic 30.0%
!! GAAAATGGGTCAGTTATTTT+AGG - chr2_4:13512610-13512629 Msa0316410:three_prime_UTR 30.0%
! GAAAATGAGTCAGTTATTTC+GGG - chr2_4:13512645-13512664 Msa0316410:CDS 30.0%
AAGAATCTAGAAAATGAAGG+AGG + chr2_4:13512692-13512711 None:intergenic 30.0%
! TTTTCATTTTGAACACGTGA+AGG - chr2_4:13512985-13513004 Msa0316410:intron 30.0%
!!! ATTTCTTTGCTTTTTCTCTC+AGG - chr2_4:13513610-13513629 Msa0316410:intron 30.0%
! AAATATGCCAATGCTTTTCT+TGG - chr2_4:13513690-13513709 Msa0316410:intron 30.0%
CAACAAAATTGGATGTTTCT+GGG + chr2_4:13513722-13513741 None:intergenic 30.0%
ACAACAAAATTGGATGTTTC+TGG + chr2_4:13513723-13513742 None:intergenic 30.0%
! AGAAACATCCAATTTTGTTG+TGG - chr2_4:13513722-13513741 Msa0316410:intron 30.0%
AGTTAACTCCACAACAAAAT+TGG + chr2_4:13513733-13513752 None:intergenic 30.0%
ATGCAATAAATGGTAAGCAA+AGG + chr2_4:13513837-13513856 None:intergenic 30.0%
TCTGATGATAAAGTCATATG+TGG + chr2_4:13513884-13513903 None:intergenic 30.0%
GACTTTATCATCAGATTATG+GGG - chr2_4:13513889-13513908 Msa0316410:intron 30.0%
CAAATTTGTAGACCTAAAAG+TGG + chr2_4:13514049-13514068 None:intergenic 30.0%
CATTTAACCTTTACTTTCTG+CGG - chr2_4:13514488-13514507 Msa0316410:intron 30.0%
AAAATATCCGCAGAAAGTAA+AGG + chr2_4:13514498-13514517 None:intergenic 30.0%
! TTTACTTTCTGCGGATATTT+TGG - chr2_4:13514497-13514516 Msa0316410:intron 30.0%
!! ATTTCATTTTGATCTTAGGG+AGG + chr2_4:13514544-13514563 None:intergenic 30.0%
! CACTTAATAGCTTAAGCTTT+TGG + chr2_4:13514663-13514682 None:intergenic 30.0%
TTCACATTCCTCCTTAAAAT+GGG + chr2_4:13515142-13515161 None:intergenic 30.0%
ATTCACATTCCTCCTTAAAA+TGG + chr2_4:13515143-13515162 None:intergenic 30.0%
CAGTCAATTCATAGAAAGTT+GGG + chr2_4:13515244-13515263 None:intergenic 30.0%
TCAGTCAATTCATAGAAAGT+TGG + chr2_4:13515245-13515264 None:intergenic 30.0%
GTAGTATCAGAAATCTAGAA+TGG - chr2_4:13515283-13515302 Msa0316410:intron 30.0%
! AGTATCAGAAATCTAGAATG+GGG - chr2_4:13515285-13515304 Msa0316410:intron 30.0%
ATATATCAAAAGCAGTGTCA+CGG + chr2_4:13515343-13515362 None:intergenic 30.0%
AAAGTGCATAAATGGTTGAA+TGG - chr2_4:13515419-13515438 Msa0316410:intron 30.0%
CTGATGAATCAAATATGTTC+TGG + chr2_4:13515830-13515849 None:intergenic 30.0%
AAATGTGAAGATACCAGATT+AGG + chr2_4:13516046-13516065 None:intergenic 30.0%
AAGAAACAATCTTTGTGTTG+AGG + chr2_4:13516211-13516230 None:intergenic 30.0%
AAGTTACTGTACAACTGTTT+AGG + chr2_4:13516704-13516723 None:intergenic 30.0%
CCAAAGATACTAAGACATTA+AGG + chr2_4:13516765-13516784 None:intergenic 30.0%
CCTTAATGTCTTAGTATCTT+TGG - chr2_4:13516762-13516781 Msa0316410:intron 30.0%
GAATCACGAGCTAAAATAAT+TGG - chr2_4:13516790-13516809 Msa0316410:intron 30.0%
TGTACTTGGGTAAACATATT+TGG + chr2_4:13516972-13516991 None:intergenic 30.0%
TAATATGCATAACATGTAGG+AGG - chr2_4:13517057-13517076 Msa0316410:intron 30.0%
!!! CTGGTATTAATTGTTTTTGC+AGG + chr2_4:13517097-13517116 None:intergenic 30.0%
! CTTAATTAGTCTAGACTTCA+AGG + chr2_4:13517122-13517141 None:intergenic 30.0%
! AATAGAGTTTCTAAAGAGCT+GGG - chr2_4:13517156-13517175 Msa0316410:intron 30.0%
!!! ACAGATATTTTTGGCAACAT+GGG - chr2_4:13517229-13517248 Msa0316410:intron 30.0%
! GTTGCCGTACTTAAATTTTT+AGG - chr2_4:13517294-13517313 Msa0316410:intron 30.0%
!!! ATTTTTTTGTCCTAGTCAAC+TGG + chr2_4:13518058-13518077 None:intergenic 30.0%
! CTATTCTTTTATCGAACTTC+CGG + chr2_4:13518091-13518110 None:intergenic 30.0%
GTTCGATAAAAGAATAGTCA+TGG - chr2_4:13518094-13518113 Msa0316410:CDS 30.0%
TCGATAAAAGAATAGTCATG+GGG - chr2_4:13518096-13518115 Msa0316410:CDS 30.0%
TAGTAAAACAGATTGGAAGT+TGG - chr2_4:13518241-13518260 Msa0316410:intron 30.0%
ATCCAAGAAAAAAGTTGAAC+TGG - chr2_4:13518330-13518349 Msa0316410:CDS 30.0%
!!! TACCAGTTCAACTTTTTTCT+TGG + chr2_4:13518335-13518354 None:intergenic 30.0%
TGTCAATTTACAATCAAGTC+CGG + chr2_4:13518533-13518552 None:intergenic 30.0%
!!! ATTAGTTTTATAGAGGAGAG+GGG + chr2_4:13518563-13518582 None:intergenic 30.0%
!!! CATTAGTTTTATAGAGGAGA+GGG + chr2_4:13518564-13518583 None:intergenic 30.0%
!!! CAAAGCCATTAGTTTTATAG+AGG + chr2_4:13518570-13518589 None:intergenic 30.0%
! ATTTATATGGGTTTGGTTCA+TGG - chr2_4:13518607-13518626 Msa0316410:intron 30.0%
! GCTAAACATCTTTTATACCA+TGG + chr2_4:13518695-13518714 None:intergenic 30.0%
! GCAGCATCTTATATTTTTCT+TGG - chr2_4:13518768-13518787 Msa0316410:intron 30.0%
!!! AGCCAAACGTTTTTTTTAAG+TGG + chr2_4:13519013-13519032 None:intergenic 30.0%
AAAAAAAACGTTTGGCTATG+TGG - chr2_4:13519016-13519035 Msa0316410:intron 30.0%
AAAAAAACGTTTGGCTATGT+GGG - chr2_4:13519017-13519036 Msa0316410:intron 30.0%
GAAGAATCATATCACATACT+TGG + chr2_4:13519090-13519109 None:intergenic 30.0%
CAAAGTAGGTCAATTATACC+GGG + chr2_4:13512426-13512445 None:intergenic 35.0%
TGTATAAATGAAGGGGAAAG+TGG - chr2_4:13512470-13512489 Msa0316410:three_prime_UTR 35.0%
AGATCGTGAAAATATGAGAG+AGG + chr2_4:13512795-13512814 None:intergenic 35.0%
GTAATTAACATGATCGGACA+AGG + chr2_4:13512880-13512899 None:intergenic 35.0%
TAATGCTGAGCTATTGGAAT+GGG - chr2_4:13513455-13513474 Msa0316410:intron 35.0%
GAGAACTAAAACCTACTTGA+TGG + chr2_4:13513541-13513560 None:intergenic 35.0%
!!! CAAGTAGGTTTTAGTTCTCT+TGG - chr2_4:13513542-13513561 Msa0316410:intron 35.0%
! AGGTTTTACACTGAAGCTTT+CGG - chr2_4:13513630-13513649 Msa0316410:intron 35.0%
!! TATGATATTGGAACCGGTTT+TGG - chr2_4:13513920-13513939 Msa0316410:intron 35.0%
GATAGCAAAATGTCCAAAAC+CGG + chr2_4:13513936-13513955 None:intergenic 35.0%
AGTAGACTATAGCTTACATC+TGG + chr2_4:13513965-13513984 None:intergenic 35.0%
!! TGAGTATCTCTTCCACTTTT+AGG - chr2_4:13514034-13514053 Msa0316410:intron 35.0%
!! ACAAATTTGTTGAAGACGTC+CGG - chr2_4:13514060-13514079 Msa0316410:intron 35.0%
TGAAACTGAGATAAAAGCAG+AGG + chr2_4:13514354-13514373 None:intergenic 35.0%
ATTTACTTGTAAATCAGGGC+AGG + chr2_4:13514589-13514608 None:intergenic 35.0%
ATTATGTGAAGGCTCGTAAA+TGG - chr2_4:13514894-13514913 Msa0316410:intron 35.0%
! TCATCCATTTTCCCCATTTT+AGG - chr2_4:13514948-13514967 Msa0316410:intron 35.0%
! CATCCATTTTCCCCATTTTA+GGG - chr2_4:13514949-13514968 Msa0316410:intron 35.0%
TTCACATTCCTCCCTAAAAT+GGG + chr2_4:13514963-13514982 None:intergenic 35.0%
ATTCACATTCCTCCCTAAAA+TGG + chr2_4:13514964-13514983 None:intergenic 35.0%
ATTATGTGAAGGCTCGTAAA+TGG - chr2_4:13514894-13514913 Msa0316410:intron 35.0%
! CATCCATTTTCCCCATTTTA+AGG - chr2_4:13514949-13514968 Msa0316410:intron 35.0%
TCACATTCCTCCTTAAAATG+GGG + chr2_4:13515141-13515160 None:intergenic 35.0%
TTTATGTTTAACATGTCCCC+TGG - chr2_4:13515443-13515462 Msa0316410:intron 35.0%
ACCAACAAGAATCAGTATCT+GGG - chr2_4:13515554-13515573 Msa0316410:intron 35.0%
AGTATTGCTAGTTCATGACA+TGG + chr2_4:13515597-13515616 None:intergenic 35.0%
AATAGGATCCAGTAAGAACA+CGG + chr2_4:13515710-13515729 None:intergenic 35.0%
! TTACTGGATCCTATTTTCAC+AGG - chr2_4:13515715-13515734 Msa0316410:CDS 35.0%
! ATCCTATTTTCACAGGCTTT+GGG - chr2_4:13515722-13515741 Msa0316410:intron 35.0%
AGTACACTTTAGCTATGCTT+GGG - chr2_4:13515897-13515916 Msa0316410:CDS 35.0%
TTGGAGCTGACATATAACTA+TGG - chr2_4:13515947-13515966 Msa0316410:intron 35.0%
TACACCTTGATAAAACTGTG+AGG - chr2_4:13516069-13516088 Msa0316410:CDS 35.0%
!! TACACCTCACAGTTTTATCA+AGG + chr2_4:13516076-13516095 None:intergenic 35.0%
AACTGTGAGGTGTATATAAC+AGG - chr2_4:13516082-13516101 Msa0316410:CDS 35.0%
TGTATATAACAGGTTGCTGT+TGG - chr2_4:13516092-13516111 Msa0316410:intron 35.0%
GTTTCTTTCTTAGATCCAGA+TGG - chr2_4:13516224-13516243 Msa0316410:intron 35.0%
GAACACAATACAAGAAAGAG+TGG - chr2_4:13516400-13516419 Msa0316410:intron 35.0%
! CCATTTGGTAACATGTCAAT+GGG + chr2_4:13516476-13516495 None:intergenic 35.0%
! TCCATTTGGTAACATGTCAA+TGG + chr2_4:13516477-13516496 None:intergenic 35.0%
! GCATGAATGTTTTGTCCATT+TGG + chr2_4:13516491-13516510 None:intergenic 35.0%
!! TGTTTAGGTTGTATGGTGTT+TGG + chr2_4:13516689-13516708 None:intergenic 35.0%
!! GTACAACTGTTTAGGTTGTA+TGG + chr2_4:13516696-13516715 None:intergenic 35.0%
ACAGTTGTACAGTAACTTTG+TGG - chr2_4:13516706-13516725 Msa0316410:intron 35.0%
CAGTTGTACAGTAACTTTGT+GGG - chr2_4:13516707-13516726 Msa0316410:intron 35.0%
TTCAGTGTAATCACAAGTGT+CGG - chr2_4:13516901-13516920 Msa0316410:intron 35.0%
! CAATAGAGTTTCTAAAGAGC+TGG - chr2_4:13517155-13517174 Msa0316410:intron 35.0%
! ATGGACCTCACAGATATTTT+TGG - chr2_4:13517220-13517239 Msa0316410:intron 35.0%
TGTTGCCAAAAATATCTGTG+AGG + chr2_4:13517228-13517247 None:intergenic 35.0%
!!! CACAGATATTTTTGGCAACA+TGG - chr2_4:13517228-13517247 Msa0316410:intron 35.0%
!! TCTTTCCCCCAATTTTAAAG+CGG + chr2_4:13517359-13517378 None:intergenic 35.0%
!! CTTTAAAATTGGGGGAAAGA+AGG - chr2_4:13517359-13517378 Msa0316410:intron 35.0%
CTGTTAAGAGTCCTACTTTA+AGG - chr2_4:13517462-13517481 Msa0316410:intron 35.0%
TGTATTCCATGCCTTAAAGT+AGG + chr2_4:13517476-13517495 None:intergenic 35.0%
! AGGCATGGAATACAACATTT+TGG - chr2_4:13517482-13517501 Msa0316410:intron 35.0%
! CATGGAATACAACATTTTGG+TGG - chr2_4:13517485-13517504 Msa0316410:intron 35.0%
!! AATACAACATTTTGGTGGCA+AGG - chr2_4:13517490-13517509 Msa0316410:intron 35.0%
CACAAACAACTTGGATTACA+AGG + chr2_4:13517865-13517884 None:intergenic 35.0%
AATCCAAGTTGTTTGTGATC+TGG - chr2_4:13517868-13517887 Msa0316410:intron 35.0%
CTCTACAAATATACGACAAG+TGG + chr2_4:13517930-13517949 None:intergenic 35.0%
CACTTGTCGTATATTTGTAG+AGG - chr2_4:13517928-13517947 Msa0316410:intron 35.0%
TATAAAACCTACAACCATCC+CGG + chr2_4:13517987-13518006 None:intergenic 35.0%
ATGCATGAGATTAAAGGTCA+TGG + chr2_4:13518163-13518182 None:intergenic 35.0%
CTGAAGATGCATGAGATTAA+AGG + chr2_4:13518169-13518188 None:intergenic 35.0%
ATCTTCAGAATCCTGGTTTA+TGG - chr2_4:13518181-13518200 Msa0316410:CDS 35.0%
AGATTGGAAGTTGGAACTAT+TGG - chr2_4:13518250-13518269 Msa0316410:intron 35.0%
GATTGGAAGTTGGAACTATT+GGG - chr2_4:13518251-13518270 Msa0316410:intron 35.0%
ATTTGAATAGCAAAGGTTGG+AGG + chr2_4:13518394-13518413 None:intergenic 35.0%
TGCATTTGAATAGCAAAGGT+TGG + chr2_4:13518397-13518416 None:intergenic 35.0%
ACAGTGCATTTGAATAGCAA+AGG + chr2_4:13518401-13518420 None:intergenic 35.0%
GTCAATTTACAATCAAGTCC+GGG + chr2_4:13518532-13518551 None:intergenic 35.0%
!!! CCATTAGTTTTATAGAGGAG+AGG + chr2_4:13518565-13518584 None:intergenic 35.0%
CCTCTCCTCTATAAAACTAA+TGG - chr2_4:13518562-13518581 Msa0316410:intron 35.0%
CCTTATGAAAAGAGGTTCAA+AGG + chr2_4:13518637-13518656 None:intergenic 35.0%
! CCTTTGAACCTCTTTTCATA+AGG - chr2_4:13518634-13518653 Msa0316410:intron 35.0%
ATATTAGAAGGTCCCACAAA+TGG - chr2_4:13518660-13518679 Msa0316410:intron 35.0%
TGGGAAACTAAACCATTTGT+GGG + chr2_4:13518675-13518694 None:intergenic 35.0%
ATGGGAAACTAAACCATTTG+TGG + chr2_4:13518676-13518695 None:intergenic 35.0%
! ACAAATGGTTTAGTTTCCCA+TGG - chr2_4:13518675-13518694 Msa0316410:intron 35.0%
!!! TACTTTTTGACTTAGTACCG+TGG - chr2_4:13518733-13518752 Msa0316410:intron 35.0%
TGCTTTAGTATAAGAAGGCA+TGG - chr2_4:13518921-13518940 Msa0316410:intron 35.0%
! TGTATGCATTTTACAGGTGT+TGG - chr2_4:13519141-13519160 Msa0316410:five_prime_UTR 35.0%
! TGACAATCAGGATTTTCTGA+AGG - chr2_4:13519165-13519184 Msa0316410:five_prime_UTR 35.0%
CACCATAATAGTATTCGGTA+TGG - chr2_4:13519292-13519311 Msa0316410:intron 35.0%
AGCCATACCGAATACTATTA+TGG + chr2_4:13519297-13519316 None:intergenic 35.0%
!! TTCGGTATGGCTTTTTAAAG+TGG - chr2_4:13519305-13519324 Msa0316410:intron 35.0%
TTTGTTCTCTACTCAAATCG+TGG - chr2_4:13519329-13519348 Msa0316410:intron 35.0%
TTGTGAGTTAGTGACTGCAT+CGG + chr2_4:13512360-13512379 None:intergenic 40.0%
AGAGAGAAAGAGGAAAGAGT+AGG + chr2_4:13512757-13512776 None:intergenic 40.0%
CCTAAATTGCAGAGAGAAAG+AGG + chr2_4:13512767-13512786 None:intergenic 40.0%
CCTCTTTCTCTCTGCAATTT+AGG - chr2_4:13512764-13512783 Msa0316410:intron 40.0%
ACTCACATTGAATATGGCTG+AGG - chr2_4:13513422-13513441 Msa0316410:intron 40.0%
ACAACCTAATGCTGAGCTAT+TGG - chr2_4:13513449-13513468 Msa0316410:intron 40.0%
CATTCCAATAGCTCAGCATT+AGG + chr2_4:13513456-13513475 None:intergenic 40.0%
CTAATGCTGAGCTATTGGAA+TGG - chr2_4:13513454-13513473 Msa0316410:intron 40.0%
TACGATCAAGATCACCAACA+CGG + chr2_4:13513518-13513537 None:intergenic 40.0%
TCTTGATCGTACCATCAAGT+AGG - chr2_4:13513527-13513546 Msa0316410:intron 40.0%
GTGATGCAATGTGTGTTTAG+AGG - chr2_4:13513576-13513595 Msa0316410:intron 40.0%
GAGAAAAAGAGATGTTCCAG+AGG - chr2_4:13513665-13513684 Msa0316410:intron 40.0%
! GCCAATGCTTTTCTTGGATT+TGG - chr2_4:13513696-13513715 Msa0316410:intron 40.0%
! GCCAAATCCAAGAAAAGCAT+TGG + chr2_4:13513700-13513719 None:intergenic 40.0%
ACCTCGTATGATATTGGAAC+CGG - chr2_4:13513914-13513933 Msa0316410:intron 40.0%
!! CAAATTTGTTGAAGACGTCC+GGG - chr2_4:13514061-13514080 Msa0316410:intron 40.0%
TAAGGGTGGAAAAGTCACTA+GGG - chr2_4:13514085-13514104 Msa0316410:intron 40.0%
! GACAAGTGTTATTGCCTTTG+TGG - chr2_4:13514130-13514149 Msa0316410:intron 40.0%
TTACTTGGCATAATGGCTCA+GGG + chr2_4:13514202-13514221 None:intergenic 40.0%
ATTACTTGGCATAATGGCTC+AGG + chr2_4:13514203-13514222 None:intergenic 40.0%
! CGAAGCATTACTTGGCATAA+TGG + chr2_4:13514209-13514228 None:intergenic 40.0%
!! GTAGAGTTGACTAGTTTGAC+AGG + chr2_4:13514717-13514736 None:intergenic 40.0%
GTCAAACTAGTCAACTCTAC+TGG - chr2_4:13514717-13514736 Msa0316410:intron 40.0%
! ATTCTAGGTAAGTTGGACAG+AGG - chr2_4:13514827-13514846 Msa0316410:intron 40.0%
TCACATTCCTCCCTAAAATG+GGG + chr2_4:13514962-13514981 None:intergenic 40.0%
GTGAATCCCTTGAGATGAAT+TGG - chr2_4:13514978-13514997 Msa0316410:intron 40.0%
ACACGTCCAATTCATCTCAA+GGG + chr2_4:13514987-13515006 None:intergenic 40.0%
TACACGTCCAATTCATCTCA+AGG + chr2_4:13514988-13515007 None:intergenic 40.0%
TTGGACGTGTAGTGTTTAGT+TGG - chr2_4:13514997-13515016 Msa0316410:intron 40.0%
TGTAGTGTTTAGTTGGACAG+AGG - chr2_4:13515004-13515023 Msa0316410:intron 40.0%
CCTCCTTAAAATGGGGAAAA+TGG + chr2_4:13515134-13515153 None:intergenic 40.0%
!! CCATTTTCCCCATTTTAAGG+AGG - chr2_4:13515131-13515150 Msa0316410:intron 40.0%
GTGAATCCCTTGAGATGAAT+TGG - chr2_4:13514978-13514997 Msa0316410:intron 40.0%
ACACGTCCAATTCATCTCAA+GGG + chr2_4:13514987-13515006 None:intergenic 40.0%
TACACGTCCAATTCATCTCA+AGG + chr2_4:13514988-13515007 None:intergenic 40.0%
ATCCACACTTCAAGCTTGAT+GGG + chr2_4:13515477-13515496 None:intergenic 40.0%
TTGAAGTGTGGATGACGAAT+AGG - chr2_4:13515484-13515503 Msa0316410:intron 40.0%
AATTCAGCACAAAGTTGGGT+GGG + chr2_4:13515510-13515529 None:intergenic 40.0%
AAATTCAGCACAAAGTTGGG+TGG + chr2_4:13515511-13515530 None:intergenic 40.0%
GACCAACAAGAATCAGTATC+TGG - chr2_4:13515553-13515572 Msa0316410:intron 40.0%
!! ACCCAGATACTGATTCTTGT+TGG + chr2_4:13515558-13515577 None:intergenic 40.0%
AACTAAGACCGTGTTCTTAC+TGG - chr2_4:13515699-13515718 Msa0316410:CDS 40.0%
! GATCCTATTTTCACAGGCTT+TGG - chr2_4:13515721-13515740 Msa0316410:intron 40.0%
AACCCAAAGCCTGTGAAAAT+AGG + chr2_4:13515727-13515746 None:intergenic 40.0%
!! GGTTGATAGACCTCAATACA+AGG - chr2_4:13515763-13515782 Msa0316410:intron 40.0%
AAAGTGTACTGTAGGATGTG+CGG + chr2_4:13515887-13515906 None:intergenic 40.0%
GCATAGCTAAAGTGTACTGT+AGG + chr2_4:13515895-13515914 None:intergenic 40.0%
CAGTACACTTTAGCTATGCT+TGG - chr2_4:13515896-13515915 Msa0316410:CDS 40.0%
ATATGTCAGCTCCAACACAA+TGG + chr2_4:13515942-13515961 None:intergenic 40.0%
GATTAGGCTTCTAGTCTAGA+AGG + chr2_4:13516030-13516049 None:intergenic 40.0%
TCTAGACTAGAAGCCTAATC+TGG - chr2_4:13516030-13516049 Msa0316410:intron 40.0%
AACCTAGCCACTCAAGAATT+TGG - chr2_4:13516149-13516168 Msa0316410:intron 40.0%
TAGCCACTCAAGAATTTGGA+GGG - chr2_4:13516153-13516172 Msa0316410:intron 40.0%
AATTTGGAGGGAAGATTACC+AGG - chr2_4:13516165-13516184 Msa0316410:intron 40.0%
CTTTCTTAGATCCAGATGGA+TGG - chr2_4:13516228-13516247 Msa0316410:intron 40.0%
GTAGTTTAGACTATTGTCCC+TGG - chr2_4:13516422-13516441 Msa0316410:intron 40.0%
AAACTAGTTGTCCCGTGATT+TGG + chr2_4:13516453-13516472 None:intergenic 40.0%
CCCATTGACATGTTACCAAA+TGG - chr2_4:13516473-13516492 Msa0316410:intron 40.0%
! TTAGGTTGTATGGTGTTTGG+TGG + chr2_4:13516686-13516705 None:intergenic 40.0%
ATGTTTACCCAAGTACACTG+TGG - chr2_4:13516975-13516994 Msa0316410:intron 40.0%
ATTACAGCCACAGTGTACTT+GGG + chr2_4:13516985-13517004 None:intergenic 40.0%
AATTACAGCCACAGTGTACT+TGG + chr2_4:13516986-13517005 None:intergenic 40.0%
! ATGTAGGAGGTTGCTTTAAC+TGG - chr2_4:13517070-13517089 Msa0316410:intron 40.0%
TAGTCTAGACTTCAAGGTTC+TGG + chr2_4:13517116-13517135 None:intergenic 40.0%
AAGAGCTGGGATGTAAATCA+AGG - chr2_4:13517169-13517188 Msa0316410:intron 40.0%
ATATCTGTGAGGTCCATGAT+TGG + chr2_4:13517217-13517236 None:intergenic 40.0%
!! ATGTGTCCCCGCTTTAAAAT+TGG - chr2_4:13517348-13517367 Msa0316410:intron 40.0%
!! TGTGTCCCCGCTTTAAAATT+GGG - chr2_4:13517349-13517368 Msa0316410:intron 40.0%
!!! TTTCCCCCAATTTTAAAGCG+GGG + chr2_4:13517357-13517376 None:intergenic 40.0%
!!! CTTTCCCCCAATTTTAAAGC+GGG + chr2_4:13517358-13517377 None:intergenic 40.0%
CCTTCTATTCGTTTAGGCTA+TGG + chr2_4:13517396-13517415 None:intergenic 40.0%
CCATAGCCTAAACGAATAGA+AGG - chr2_4:13517393-13517412 Msa0316410:intron 40.0%
TAGCCTAAACGAATAGAAGG+AGG - chr2_4:13517396-13517415 Msa0316410:intron 40.0%
!! AAGAGTCCTACTTTAAGGCA+TGG - chr2_4:13517467-13517486 Msa0316410:intron 40.0%
!! CATTTTGGTGGCAAGGAAAA+TGG - chr2_4:13517497-13517516 Msa0316410:intron 40.0%
! GTTTTGCCATGACGCTTAAA+TGG - chr2_4:13517524-13517543 Msa0316410:intron 40.0%
GGAGTAGTTCAAACCTAGAA+CGG - chr2_4:13517747-13517766 Msa0316410:CDS 40.0%
TTCATTTCTGTCTCCGTTCT+AGG + chr2_4:13517763-13517782 None:intergenic 40.0%
!! TGTGTTAGTTGTGGCTTTGA+TGG - chr2_4:13517794-13517813 Msa0316410:intron 40.0%
CCTACAATCAAACCAACATG+TGG + chr2_4:13517842-13517861 None:intergenic 40.0%
!! CCACATGTTGGTTTGATTGT+AGG - chr2_4:13517839-13517858 Msa0316410:intron 40.0%
CTTCCAGATCACAAACAACT+TGG + chr2_4:13517874-13517893 None:intergenic 40.0%
TGTTTGTGATCTGGAAGACA+TGG - chr2_4:13517877-13517896 Msa0316410:CDS 40.0%
GTTTGTGATCTGGAAGACAT+GGG - chr2_4:13517878-13517897 Msa0316410:CDS 40.0%
AATAGTCATGGGGCAATACT+GGG - chr2_4:13518106-13518125 Msa0316410:CDS 40.0%
! GCTTTCTGCATTTTACTGGT+TGG + chr2_4:13518141-13518160 None:intergenic 40.0%
! CATGGCTTTCTGCATTTTAC+TGG + chr2_4:13518145-13518164 None:intergenic 40.0%
TGGGAAGTAATGTATGTAGC+CGG - chr2_4:13518270-13518289 Msa0316410:intron 40.0%
TTCTCATTGAGAACTCTACC+CGG + chr2_4:13518292-13518311 None:intergenic 40.0%
CACTTAGGGAATGAGACAAA+GGG + chr2_4:13518460-13518479 None:intergenic 40.0%
ACACTTAGGGAATGAGACAA+AGG + chr2_4:13518461-13518480 None:intergenic 40.0%
CTAGAGACTTGTCACACTTA+GGG + chr2_4:13518474-13518493 None:intergenic 40.0%
ACTAGAGACTTGTCACACTT+AGG + chr2_4:13518475-13518494 None:intergenic 40.0%
!! TCAGGATTTTCTGAAGGAAC+TGG - chr2_4:13519171-13519190 Msa0316410:intron 40.0%
AGACGATATTGAACAGCAGT+TGG - chr2_4:13519377-13519396 Msa0316410:intron 40.0%
TGTGAGTTAGTGACTGCATC+GGG + chr2_4:13512359-13512378 None:intergenic 45.0%
! TAGAGCAAGTACTGTGTACG+TGG + chr2_4:13512390-13512409 None:intergenic 45.0%
GTAGGTCAATTATACCGGGA+CGG + chr2_4:13512422-13512441 None:intergenic 45.0%
CAGTGAGTGAGTGAGAGTAA+CGG + chr2_4:13512731-13512750 None:intergenic 45.0%
! GCATTGGCATATTTCTCCTC+TGG + chr2_4:13513684-13513703 None:intergenic 45.0%
! ACCGGTTCCAATATCATACG+AGG + chr2_4:13513918-13513937 None:intergenic 45.0%
CTAAGGGTGGAAAAGTCACT+AGG - chr2_4:13514084-13514103 Msa0316410:intron 45.0%
TACTTGGCATAATGGCTCAG+GGG + chr2_4:13514201-13514220 None:intergenic 45.0%
TGCCAAGTAATGCTTCGTGT+TGG - chr2_4:13514212-13514231 Msa0316410:intron 45.0%
! CACCAACACGAAGCATTACT+TGG + chr2_4:13514217-13514236 None:intergenic 45.0%
AAATCAGGGCAGGAGTTCAT+TGG + chr2_4:13514579-13514598 None:intergenic 45.0%
CCTCCCTAAAATGGGGAAAA+TGG + chr2_4:13514955-13514974 None:intergenic 45.0%
!! CCATTTTCCCCATTTTAGGG+AGG - chr2_4:13514952-13514971 Msa0316410:intron 45.0%
CATCCACACTTCAAGCTTGA+TGG + chr2_4:13515478-13515497 None:intergenic 45.0%
AAGGAGCTCACCTTGTATTG+AGG + chr2_4:13515776-13515795 None:intergenic 45.0%
!! TGGTGTCACTGAATACACCA+AGG - chr2_4:13515967-13515986 Msa0316410:intron 45.0%
!! GGTGTCACTGAATACACCAA+GGG - chr2_4:13515968-13515987 Msa0316410:intron 45.0%
CTGTGCATAAGCATTTCCCT+TGG + chr2_4:13515987-13516006 None:intergenic 45.0%
CAAGGGAAATGCTTATGCAC+AGG - chr2_4:13515985-13516004 Msa0316410:intron 45.0%
! AGTGGCTAGGTTGACTAACT+CGG + chr2_4:13516141-13516160 None:intergenic 45.0%
CTCCAAATTCTTGAGTGGCT+AGG + chr2_4:13516154-13516173 None:intergenic 45.0%
CTAGCCACTCAAGAATTTGG+AGG - chr2_4:13516152-13516171 Msa0316410:intron 45.0%
CTTCCCTCCAAATTCTTGAG+TGG + chr2_4:13516159-13516178 None:intergenic 45.0%
TTTGTGTTGAGGCCAGGAAT+TGG + chr2_4:13516200-13516219 None:intergenic 45.0%
ACAATCTTTGTGTTGAGGCC+AGG + chr2_4:13516206-13516225 None:intergenic 45.0%
! CTCACAGTTTTCCATCCATC+TGG + chr2_4:13516242-13516261 None:intergenic 45.0%
TTGAGTAAGGCTGCGACTTA+GGG - chr2_4:13516299-13516318 Msa0316410:intron 45.0%
!! AGTTGTCCCGTGATTTGGTA+AGG + chr2_4:13516448-13516467 None:intergenic 45.0%
!! GTAATCACAAGTGTCGGTGT+CGG - chr2_4:13516907-13516926 Msa0316410:intron 45.0%
GCACGAACACTTCTGATTGA+AGG + chr2_4:13516946-13516965 None:intergenic 45.0%
!! GTGTCCCCGCTTTAAAATTG+GGG - chr2_4:13517350-13517369 Msa0316410:intron 45.0%
!! TGTCCCCGCTTTAAAATTGG+GGG - chr2_4:13517351-13517370 Msa0316410:intron 45.0%
CCACCTCCTTCTATTCGTTT+AGG + chr2_4:13517402-13517421 None:intergenic 45.0%
CCTAAACGAATAGAAGGAGG+TGG - chr2_4:13517399-13517418 Msa0316410:intron 45.0%
AACGAATAGAAGGAGGTGGA+TGG - chr2_4:13517403-13517422 Msa0316410:intron 45.0%
ACGAATAGAAGGAGGTGGAT+GGG - chr2_4:13517404-13517423 Msa0316410:intron 45.0%
TGGTGGCAAGGAAAATGGAA+AGG - chr2_4:13517502-13517521 Msa0316410:intron 45.0%
TGCCATGACGCTTAAATGGA+AGG - chr2_4:13517528-13517547 Msa0316410:intron 45.0%
CACCTTCCATTTAAGCGTCA+TGG + chr2_4:13517533-13517552 None:intergenic 45.0%
CATGACGCTTAAATGGAAGG+TGG - chr2_4:13517531-13517550 Msa0316410:intron 45.0%
! TAACCACGAAGCTCCAGTTT+TGG - chr2_4:13517568-13517587 Msa0316410:intron 45.0%
AGCACAATTTCGGCCAAAAC+TGG + chr2_4:13517584-13517603 None:intergenic 45.0%
!! GTTTTGGCCGAAATTGTGCT+TGG - chr2_4:13517584-13517603 Msa0316410:CDS 45.0%
ACTGCCTCCAAGCACAATTT+CGG + chr2_4:13517594-13517613 None:intergenic 45.0%
AGTGGAAAAGTCGGATGAAG+TGG - chr2_4:13517611-13517630 Msa0316410:CDS 45.0%
GATGAAGTGGCAGCATCTTT+GGG - chr2_4:13517624-13517643 Msa0316410:CDS 45.0%
TGTCCTTGCTGAGCATGAAA+TGG - chr2_4:13517675-13517694 Msa0316410:CDS 45.0%
GTCCTTGCTGAGCATGAAAT+GGG - chr2_4:13517676-13517695 Msa0316410:CDS 45.0%
TTGCTGAGCATGAAATGGGT+GGG - chr2_4:13517680-13517699 Msa0316410:CDS 45.0%
ATAGGTAAGCTTGTGGTCGA+AGG - chr2_4:13517705-13517724 Msa0316410:CDS 45.0%
GAAGGAGGTGGAAAAAGGAA+GGG - chr2_4:13517723-13517742 Msa0316410:CDS 45.0%
AAGGAGGTGGAAAAAGGAAG+GGG - chr2_4:13517724-13517743 Msa0316410:CDS 45.0%
AACGGAGACAGAAATGAAGC+TGG - chr2_4:13517765-13517784 Msa0316410:CDS 45.0%
TGGAGGAGTTGTGTTAGTTG+TGG - chr2_4:13517785-13517804 Msa0316410:intron 45.0%
!! TGTGGCTTTGATGGAGAGAT+TGG - chr2_4:13517803-13517822 Msa0316410:intron 45.0%
CAACATGTGGATCTTCCATC+AGG + chr2_4:13517829-13517848 None:intergenic 45.0%
CTGATGGAAGATCCACATGT+TGG - chr2_4:13517827-13517846 Msa0316410:intron 45.0%
! TTTGTAGAGGTGTGAAGAGC+TGG - chr2_4:13517941-13517960 Msa0316410:intron 45.0%
! TTGTAGAGGTGTGAAGAGCT+GGG - chr2_4:13517942-13517961 Msa0316410:intron 45.0%
AAAAATCAGCCCTTCTCTGC+CGG - chr2_4:13517965-13517984 Msa0316410:intron 45.0%
GAATAGTCATGGGGCAATAC+TGG - chr2_4:13518105-13518124 Msa0316410:CDS 45.0%
ATAGTCATGGGGCAATACTG+GGG - chr2_4:13518107-13518126 Msa0316410:CDS 45.0%
CTCATGCATCTTCAGAATCC+TGG - chr2_4:13518174-13518193 Msa0316410:CDS 45.0%
GGGAAGTAATGTATGTAGCC+GGG - chr2_4:13518271-13518290 Msa0316410:intron 45.0%
ATGAGACAAAGGGACGAGAA+TGG + chr2_4:13518450-13518469 None:intergenic 45.0%
GCTGCTCAGAATGAATTCCA+CGG + chr2_4:13518753-13518772 None:intergenic 45.0%
!! ACAGGTGTTGGTTGACAATC+AGG - chr2_4:13519153-13519172 Msa0316410:five_prime_UTR 45.0%
!! AATTCAAATAAAAAAATTAA+AGG + chr2_4:13513068-13513087 None:intergenic 5.0%
AGTTAGTGACTGCATCGGGA+CGG + chr2_4:13512355-13512374 None:intergenic 50.0%
GTCAATTATACCGGGACGGA+TGG + chr2_4:13512418-13512437 None:intergenic 50.0%
TGAGTGAGTGAGAGTAACGG+AGG + chr2_4:13512728-13512747 None:intergenic 50.0%
CGTTACTCTCACTCACTCAC+TGG - chr2_4:13512729-13512748 Msa0316410:intron 50.0%
GGTAAACAGCATGCAGGAAG+CGG + chr2_4:13513497-13513516 None:intergenic 50.0%
CAACACGGTAAACAGCATGC+AGG + chr2_4:13513503-13513522 None:intergenic 50.0%
! CTGCATGCTGTTTACCGTGT+TGG - chr2_4:13513501-13513520 Msa0316410:intron 50.0%
GGGGTGACCTCGTATGATAT+TGG - chr2_4:13513908-13513927 Msa0316410:intron 50.0%
! TGACTTTTCCACCCTTAGCC+CGG + chr2_4:13514082-13514101 None:intergenic 50.0%
ACCATCAGGATCTGCCACAA+AGG + chr2_4:13514147-13514166 None:intergenic 50.0%
AGCCCATCAAGCTTGAAGTG+TGG - chr2_4:13515472-13515491 Msa0316410:intron 50.0%
!! ACAGGCTTTGGGTTTGAAGC+TGG - chr2_4:13515733-13515752 Msa0316410:intron 50.0%
! CTTTGGGTTTGAAGCTGGTG+AGG - chr2_4:13515738-13515757 Msa0316410:intron 50.0%
GGAAGATTACCAGGCAACCA+GGG - chr2_4:13516174-13516193 Msa0316410:intron 50.0%
GTTGAGTAAGGCTGCGACTT+AGG - chr2_4:13516298-13516317 Msa0316410:intron 50.0%
TGAGTAAGGCTGCGACTTAG+GGG - chr2_4:13516300-13516319 Msa0316410:intron 50.0%
!! TCCCTGGCCTTACCAAATCA+CGG - chr2_4:13516438-13516457 Msa0316410:intron 50.0%
!! TGGTGTTTGGTGGTGGACAA+CGG + chr2_4:13516676-13516695 None:intergenic 50.0%
! GGTTGTATGGTGTTTGGTGG+TGG + chr2_4:13516683-13516702 None:intergenic 50.0%
GTCCATGTCAGTGTCGTGTT+CGG + chr2_4:13516862-13516881 None:intergenic 50.0%
! TTCTGATTGAAGGCGTGTCC+CGG + chr2_4:13516936-13516955 None:intergenic 50.0%
ATTGGCCCAGGTCCACATTA+GGG + chr2_4:13517199-13517218 None:intergenic 50.0%
TGGGGGAAAGAAGGTGAAAG+TGG - chr2_4:13517368-13517387 Msa0316410:intron 50.0%
GGGGGAAAGAAGGTGAAAGT+GGG - chr2_4:13517369-13517388 Msa0316410:intron 50.0%
CGAATAGAAGGAGGTGGATG+GGG - chr2_4:13517405-13517424 Msa0316410:intron 50.0%
AACTGGAGCTTCGTGGTTAC+CGG + chr2_4:13517567-13517586 None:intergenic 50.0%
TTGGCCGAAATTGTGCTTGG+AGG - chr2_4:13517587-13517606 Msa0316410:CDS 50.0%
GAAATTGTGCTTGGAGGCAG+TGG - chr2_4:13517593-13517612 Msa0316410:CDS 50.0%
CTTGGAGGCAGTGGAAAAGT+CGG - chr2_4:13517602-13517621 Msa0316410:CDS 50.0%
GGATGAAGTGGCAGCATCTT+TGG - chr2_4:13517623-13517642 Msa0316410:CDS 50.0%
AAGTGGCAGCATCTTTGGGT+TGG - chr2_4:13517628-13517647 Msa0316410:CDS 50.0%
CACCCATTTCATGCTCAGCA+AGG + chr2_4:13517681-13517700 None:intergenic 50.0%
CTTGCTGAGCATGAAATGGG+TGG - chr2_4:13517679-13517698 Msa0316410:CDS 50.0%
GCATGAAATGGGTGGGAGAT+AGG - chr2_4:13517687-13517706 Msa0316410:CDS 50.0%
GTGGGAGATAGGTAAGCTTG+TGG - chr2_4:13517698-13517717 Msa0316410:CDS 50.0%
TGGTCGAAGGAGGTGGAAAA+AGG - chr2_4:13517718-13517737 Msa0316410:CDS 50.0%
CGAAGGAGGTGGAAAAAGGA+AGG - chr2_4:13517722-13517741 Msa0316410:CDS 50.0%
AGGAGGTGGAAAAAGGAAGG+GGG - chr2_4:13517725-13517744 Msa0316410:CDS 50.0%
GGAGACAGAAATGAAGCTGG+AGG - chr2_4:13517768-13517787 Msa0316410:intron 50.0%
!! TGATGGAGAGATTGGCCTGA+TGG - chr2_4:13517811-13517830 Msa0316410:intron 50.0%
AAAATCAGCCCTTCTCTGCC+GGG - chr2_4:13517966-13517985 Msa0316410:intron 50.0%
GCTTAGTCTGCCAGTTGACT+AGG - chr2_4:13518045-13518064 Msa0316410:intron 50.0%
TAGTCATGGGGCAATACTGG+GGG - chr2_4:13518108-13518127 Msa0316410:CDS 50.0%
AATCAAGTCCGGGTTAACCC+GGG + chr2_4:13518522-13518541 None:intergenic 50.0%
CAATCAAGTCCGGGTTAACC+CGG + chr2_4:13518523-13518542 None:intergenic 50.0%
AACGTTTGGCTATGTGGGCA+CGG - chr2_4:13519022-13519041 Msa0316410:intron 50.0%
ACTGCATCGGGACGGAGTTA+CGG + chr2_4:13512347-13512366 None:intergenic 55.0%
CTCTAGTACTCCATCCGTCC+CGG - chr2_4:13512405-13512424 Msa0316410:three_prime_UTR 55.0%
TGTTGAAGACGTCCGGGCTA+AGG - chr2_4:13514067-13514086 Msa0316410:intron 55.0%
GTTGAAGACGTCCGGGCTAA+GGG - chr2_4:13514068-13514087 Msa0316410:intron 55.0%
GGAAAAGTCACTAGGGAGCC+TGG - chr2_4:13514092-13514111 Msa0316410:intron 55.0%
ACACTTGTCCCGCCACTAAC+TGG + chr2_4:13514119-13514138 None:intergenic 55.0%
GCCTTTGTGGCAGATCCTGA+TGG - chr2_4:13514143-13514162 Msa0316410:intron 55.0%
GCTCAGGGGTAGAAGCTCTT+TGG + chr2_4:13514187-13514206 None:intergenic 55.0%
!! TTGATGGGCTAATGCGCCAG+GGG + chr2_4:13515462-13515481 None:intergenic 55.0%
!! CTTGATGGGCTAATGCGCCA+GGG + chr2_4:13515463-13515482 None:intergenic 55.0%
! GGGTTTGAAGCTGGTGAGGA+CGG - chr2_4:13515742-13515761 Msa0316410:intron 55.0%
AGCTATGCTTGGGTACGCAG+AGG - chr2_4:13515907-13515926 Msa0316410:CDS 55.0%
GGAGCACGAGACCATTGTGT+TGG - chr2_4:13515928-13515947 Msa0316410:intron 55.0%
GGGAAGATTACCAGGCAACC+AGG - chr2_4:13516173-13516192 Msa0316410:intron 55.0%
!! CCCGTGATTTGGTAAGGCCA+GGG + chr2_4:13516442-13516461 None:intergenic 55.0%
!! CCCTGGCCTTACCAAATCAC+GGG - chr2_4:13516439-13516458 Msa0316410:intron 55.0%
!! TCCCGTGATTTGGTAAGGCC+AGG + chr2_4:13516443-13516462 None:intergenic 55.0%
!! GGTGTTTGGTGGTGGACAAC+GGG + chr2_4:13516675-13516694 None:intergenic 55.0%
CACCGAACACGACACTGACA+TGG - chr2_4:13516857-13516876 Msa0316410:intron 55.0%
AATCAAGGCCCCCCCTAATG+TGG - chr2_4:13517184-13517203 Msa0316410:intron 55.0%
TTGGCCCAGGTCCACATTAG+GGG + chr2_4:13517198-13517217 None:intergenic 55.0%
! GATTGGCCCAGGTCCACATT+AGG + chr2_4:13517200-13517219 None:intergenic 55.0%
ATGTGGACCTGGGCCAATCA+TGG - chr2_4:13517201-13517220 Msa0316410:intron 55.0%
GGCTTGCAGTGTGGTTCATC+TGG - chr2_4:13517250-13517269 Msa0316410:intron 55.0%
GCAGTCGGTGCAAGATGCTA+TGG - chr2_4:13517439-13517458 Msa0316410:intron 55.0%
GCTTAAATGGAAGGTGGCCC+TGG - chr2_4:13517537-13517556 Msa0316410:intron 55.0%
!! CAGCATCTTTGGGTTGGCAG+AGG - chr2_4:13517634-13517653 Msa0316410:CDS 55.0%
GGTAAGCTTGTGGTCGAAGG+AGG - chr2_4:13517708-13517727 Msa0316410:CDS 55.0%
AAGCTTGTGGTCGAAGGAGG+TGG - chr2_4:13517711-13517730 Msa0316410:CDS 55.0%
GGAGGTGGAAAAAGGAAGGG+GGG - chr2_4:13517726-13517745 Msa0316410:CDS 55.0%
GGAAGACATGGGCAGTACTG+TGG - chr2_4:13517889-13517908 Msa0316410:CDS 55.0%
AGACATGGGCAGTACTGTGG+TGG - chr2_4:13517892-13517911 Msa0316410:CDS 55.0%
GACATGGGCAGTACTGTGGT+GGG - chr2_4:13517893-13517912 Msa0316410:CDS 55.0%
ACAACCATCCCGGCAGAGAA+GGG + chr2_4:13517977-13517996 None:intergenic 55.0%
TACAACCATCCCGGCAGAGA+AGG + chr2_4:13517978-13517997 None:intergenic 55.0%
TTCTCTGCCGGGATGGTTGT+AGG - chr2_4:13517977-13517996 Msa0316410:intron 55.0%
TGCGGACAAGTGGACAACAC+AGG + chr2_4:13518498-13518517 None:intergenic 55.0%
TTGTCCACTTGTCCGCAACC+CGG - chr2_4:13518501-13518520 Msa0316410:intron 55.0%
GGAACTGGAGTGAAGTGTGC+TGG - chr2_4:13519186-13519205 Msa0316410:intron 55.0%
! CGGGACGGAGTTACGGGTTA+TGG + chr2_4:13512340-13512359 None:intergenic 60.0%
CTGCATCGGGACGGAGTTAC+GGG + chr2_4:13512346-13512365 None:intergenic 60.0%
AGGGAGCCTGGTCCAGTTAG+TGG - chr2_4:13514104-13514123 Msa0316410:intron 60.0%
GAGCCTGGTCCAGTTAGTGG+CGG - chr2_4:13514107-13514126 Msa0316410:intron 60.0%
AGCCTGGTCCAGTTAGTGGC+GGG - chr2_4:13514108-13514127 Msa0316410:intron 60.0%
!! GCTTGATGGGCTAATGCGCC+AGG + chr2_4:13515464-13515483 None:intergenic 60.0%
AGGAATTGGCCCTGGTTGCC+TGG + chr2_4:13516186-13516205 None:intergenic 60.0%
AGGCAACCAGGGCCAATTCC+TGG - chr2_4:13516185-13516204 Msa0316410:intron 60.0%
TTGAGGCCAGGAATTGGCCC+TGG + chr2_4:13516194-13516213 None:intergenic 60.0%
!! CAAGTGTCGGTGTCGGACAC+CGG - chr2_4:13516914-13516933 Msa0316410:intron 60.0%
!! AAGTGTCGGTGTCGGACACC+GGG - chr2_4:13516915-13516934 Msa0316410:intron 60.0%
TGGCCCAGGTCCACATTAGG+GGG + chr2_4:13517197-13517216 None:intergenic 60.0%
! GTGAGGTCCATGATTGGCCC+AGG + chr2_4:13517211-13517230 None:intergenic 60.0%
GGCAACATGGGCTTGCAGTG+TGG - chr2_4:13517241-13517260 Msa0316410:intron 60.0%
CGGCCAAAACTGGAGCTTCG+TGG + chr2_4:13517574-13517593 None:intergenic 60.0%
TGTCCACTTGTCCGCAACCC+GGG - chr2_4:13518502-13518521 Msa0316410:intron 60.0%
TAACCCGGGTTGCGGACAAG+TGG + chr2_4:13518508-13518527 None:intergenic 60.0%
GAAGACGTCCGGGCTAAGGG+TGG - chr2_4:13514071-13514090 Msa0316410:intron 65.0%
GTCCCGCCACTAACTGGACC+AGG + chr2_4:13514113-13514132 None:intergenic 65.0%
GCCCCCCCTAATGTGGACCT+GGG - chr2_4:13517191-13517210 Msa0316410:intron 65.0%
GCCCAGGTCCACATTAGGGG+GGG + chr2_4:13517195-13517214 None:intergenic 65.0%
GGCCCAGGTCCACATTAGGG+GGG + chr2_4:13517196-13517215 None:intergenic 65.0%
! GGTGGATGGGGCACTAGCAG+AGG - chr2_4:13517417-13517436 Msa0316410:intron 65.0%
! GGGGCACTAGCAGAGGCAGT+CGG - chr2_4:13517424-13517443 Msa0316410:intron 65.0%
TCGTGGTTACCGGCGCTCCA+GGG + chr2_4:13517557-13517576 None:intergenic 65.0%
TTCGTGGTTACCGGCGCTCC+AGG + chr2_4:13517558-13517577 None:intergenic 65.0%
!! TGGGCAGTACTGTGGTGGGC+AGG - chr2_4:13517897-13517916 Msa0316410:CDS 65.0%
TCAGCCCTTCTCTGCCGGGA+TGG - chr2_4:13517970-13517989 Msa0316410:intron 65.0%
GTCCGCAACCCGGGTTAACC+CGG - chr2_4:13518511-13518530 Msa0316410:intron 65.0%
GTCCGGGTTAACCCGGGTTG+CGG + chr2_4:13518516-13518535 None:intergenic 65.0%
GGCCCCCCCTAATGTGGACC+TGG - chr2_4:13517190-13517209 Msa0316410:intron 70.0%
GGAAGGTGGCCCTGGAGCGC+CGG - chr2_4:13517545-13517564 Msa0316410:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 13512336 13519506 13512336 ID=Msa0316410;Name=Msa0316410
chr2_4 mRNA 13512336 13519506 13512336 ID=Msa0316410-mRNA-1;Parent=Msa0316410;Name=Msa0316410-mRNA-1;_AED=0.10;_eAED=0.10;_QI=185|1|1|1|0.77|0.7|10|308|287
chr2_4 exon 13512336 13512685 13512336 ID=Msa0316410-mRNA-1:exon:5112;Parent=Msa0316410-mRNA-1
chr2_4 exon 13515586 13515738 13515586 ID=Msa0316410-mRNA-1:exon:5111;Parent=Msa0316410-mRNA-1
chr2_4 exon 13515836 13515943 13515836 ID=Msa0316410-mRNA-1:exon:5110;Parent=Msa0316410-mRNA-1
chr2_4 exon 13516058 13516105 13516058 ID=Msa0316410-mRNA-1:exon:5109;Parent=Msa0316410-mRNA-1
chr2_4 exon 13517574 13517786 13517574 ID=Msa0316410-mRNA-1:exon:5108;Parent=Msa0316410-mRNA-1
chr2_4 exon 13517875 13517939 13517875 ID=Msa0316410-mRNA-1:exon:5107;Parent=Msa0316410-mRNA-1
chr2_4 exon 13518086 13518210 13518086 ID=Msa0316410-mRNA-1:exon:5106;Parent=Msa0316410-mRNA-1
chr2_4 exon 13518298 13518429 13518298 ID=Msa0316410-mRNA-1:exon:5105;Parent=Msa0316410-mRNA-1
chr2_4 exon 13519092 13519188 13519092 ID=Msa0316410-mRNA-1:exon:5104;Parent=Msa0316410-mRNA-1
chr2_4 exon 13519441 13519506 13519441 ID=Msa0316410-mRNA-1:exon:5103;Parent=Msa0316410-mRNA-1
chr2_4 five_prime_UTR 13519441 13519506 13519441 ID=Msa0316410-mRNA-1:five_prime_utr;Parent=Msa0316410-mRNA-1
chr2_4 five_prime_UTR 13519092 13519188 13519092 ID=Msa0316410-mRNA-1:five_prime_utr;Parent=Msa0316410-mRNA-1
chr2_4 five_prime_UTR 13518408 13518429 13518408 ID=Msa0316410-mRNA-1:five_prime_utr;Parent=Msa0316410-mRNA-1
chr2_4 CDS 13518298 13518407 13518298 ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1
chr2_4 CDS 13518086 13518210 13518086 ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1
chr2_4 CDS 13517875 13517939 13517875 ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1
chr2_4 CDS 13517574 13517786 13517574 ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1
chr2_4 CDS 13516058 13516105 13516058 ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1
chr2_4 CDS 13515836 13515943 13515836 ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1
chr2_4 CDS 13515586 13515738 13515586 ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1
chr2_4 CDS 13512644 13512685 13512644 ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1
chr2_4 three_prime_UTR 13512336 13512643 13512336 ID=Msa0316410-mRNA-1:three_prime_utr;Parent=Msa0316410-mRNA-1
Gene Sequence

>Msa0316410

ATGGCTGAGGCTGCACAACCTAATGCTGAGCTATTGGAATGGGCGAAAAAAGACAAGCGCCGCTTCCTGCATGCTGTTTACCGTGTTGGTGATCTTGATCGTACCATCAAGTTTTACACTGAAGCTTTCGGAATGAAGCTTTTGAGAAAAAGAGATGTTCCAGAGGAGAAATATGCCAATGCTTTTCTTGGATTTGGCCCAGAAACATCCAATTTTGTTGTGGAGTTAACTTATAATTATGGGGTGACCTCGTATGATATTGGAACCGGTTTTGGACATTTTGCTATCGCTACTCCAGATGTCTACAAATTTGTTGAAGACGTCCGGGCTAAGGGTGGAAAAGTCACTAGGGAGCCTGGTCCAGTTAGTGGCGGGACAAGTGTTATTGCCTTTGTGGCAGATCCTGATGGTTATCTTTTTGAAATTCTCCAAAGAGCTTCTACCCCTGAGCCATTATGCCAAGTAATGCTTCGTGTTGGTGACTTAGAGCGCTCAATTAAGTTTTATGAAAAGGCTTTGGGTTTGAAGCTGGTGAGGACGGTTGATAGACCTCAATACAAGTACACTTTAGCTATGCTTGGGTACGCAGAGGAGCACGAGACCATTGTGTTGGAGCTGACATATAACTATGGTGTCACTGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTGTTGGCACTGATGATGTATACAAGAGTGCCGAGTTAGTCAACCTAGCCACTCAAGAATTTGGAGGGAAGATTACCAGGCAACCAGGGCCAATTCCTGGCCTCAACACAAAGATTGTTTCTTTCTTAGATCCAGATGGATGGAAAACTGTGTTGGTTGACAATCAGGATTTTCTGAAGGAACTGGAGTGA

Protein sequence

>Msa0316410

MAEAAQPNAELLEWAKKDKRRFLHAVYRVGDLDRTIKFYTEAFGMKLLRKRDVPEEKYANAFLGFGPETSNFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKFVEDVRAKGGKVTREPGPVSGGTSVIAFVADPDGYLFEILQRASTPEPLCQVMLRVGDLERSIKFYEKALGLKLVRTVDRPQYKYTLAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAVGTDDVYKSAELVNLATQEFGGKITRQPGPIPGLNTKIVSFLDPDGWKTVLVDNQDFLKELE*