Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316410 | XP_013462837.1 | 98.258 | 287 | 5 | 0 | 1 | 287 | 1 | 287 | 0.0 | 580 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316410 | sp|O65398|GLX1_ARATH | 79.443 | 287 | 55 | 1 | 1 | 287 | 1 | 283 | 3.49e-174 | 485 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0196690 | Msa0316410 | 0.883609 | 3.883413e-71 | -8.615850e-47 |
Msa0276130 | Msa0316410 | 0.998369 | 4.164256e-263 | -8.615850e-47 |
Msa0316410 | Msa0683730 | 0.803540 | 3.320593e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316410 | MtrunA17_Chr2g0288571 | 98.258 | 287 | 5 | 0 | 1 | 287 | 1 | 287 | 0.0 | 580 |
Msa0316410 | MtrunA17_Chr4g0075021 | 79.710 | 276 | 56 | 0 | 12 | 287 | 7 | 282 | 6.40e-167 | 464 |
Msa0316410 | MtrunA17_Chr8g0390251 | 72.887 | 284 | 72 | 2 | 4 | 287 | 69 | 347 | 2.39e-155 | 437 |
Msa0316410 | MtrunA17_Chr4g0075001 | 76.800 | 250 | 58 | 0 | 38 | 287 | 16 | 265 | 4.54e-145 | 408 |
Msa0316410 | MtrunA17_Chr4g0075001 | 47.107 | 121 | 60 | 1 | 22 | 138 | 130 | 250 | 2.78e-28 | 109 |
Msa0316410 | MtrunA17_Chr3g0140091 | 67.845 | 283 | 87 | 1 | 5 | 287 | 72 | 350 | 2.19e-141 | 402 |
Msa0316410 | MtrunA17_Chr6g0486631 | 65.957 | 282 | 90 | 2 | 6 | 287 | 73 | 348 | 1.01e-140 | 400 |
Msa0316410 | MtrunA17_Chr4g0019621 | 66.932 | 251 | 74 | 2 | 37 | 287 | 7 | 248 | 1.49e-120 | 345 |
Msa0316410 | MtrunA17_Chr4g0019621 | 55.556 | 117 | 47 | 1 | 22 | 138 | 122 | 233 | 4.46e-35 | 127 |
Msa0316410 | MtrunA17_Chr4g0028391 | 31.544 | 149 | 75 | 5 | 24 | 147 | 79 | 225 | 1.30e-14 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316410 | AT1G11840.6 | 79.443 | 287 | 55 | 1 | 1 | 287 | 40 | 322 | 1.90e-175 | 487 |
Msa0316410 | AT1G11840.4 | 79.443 | 287 | 55 | 1 | 1 | 287 | 1 | 283 | 3.55e-175 | 485 |
Msa0316410 | AT1G11840.1 | 79.443 | 287 | 55 | 1 | 1 | 287 | 1 | 283 | 3.55e-175 | 485 |
Msa0316410 | AT1G11840.3 | 79.443 | 287 | 55 | 1 | 1 | 287 | 1 | 283 | 3.55e-175 | 485 |
Msa0316410 | AT1G11840.2 | 79.443 | 287 | 55 | 1 | 1 | 287 | 1 | 283 | 3.55e-175 | 485 |
Msa0316410 | AT1G67280.1 | 72.028 | 286 | 76 | 1 | 2 | 287 | 69 | 350 | 1.12e-154 | 436 |
Msa0316410 | AT1G67280.2 | 73.684 | 266 | 66 | 1 | 22 | 287 | 1 | 262 | 5.35e-147 | 413 |
Msa0316410 | AT1G11840.5 | 79.204 | 226 | 43 | 1 | 1 | 226 | 1 | 222 | 4.04e-134 | 379 |
Msa0316410 | AT1G11840.5 | 42.857 | 126 | 68 | 1 | 152 | 277 | 18 | 139 | 8.58e-27 | 105 |
Msa0316410 | AT1G08110.3 | 30.345 | 145 | 74 | 4 | 24 | 143 | 30 | 172 | 1.59e-12 | 65.1 |
Msa0316410 | AT1G08110.2 | 30.345 | 145 | 74 | 4 | 24 | 143 | 30 | 172 | 1.59e-12 | 65.1 |
Msa0316410 | AT1G08110.1 | 30.345 | 145 | 74 | 4 | 24 | 143 | 30 | 172 | 1.59e-12 | 65.1 |
Msa0316410 | AT1G08110.4 | 30.345 | 145 | 74 | 4 | 24 | 143 | 80 | 222 | 3.49e-12 | 65.1 |
Find 101 sgRNAs with CRISPR-Local
Find 539 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAACAAAATTGGATGTTTC+TGG | 0.199625 | 2_4:+13518100 | None:intergenic |
AGAAAATGAGTCAGTTATTT+CGG | 0.220403 | 2_4:-13519176 | Msa0316410:intron |
TATGATATTGGAACCGGTTT+TGG | 0.238354 | 2_4:-13517900 | Msa0316410:CDS |
AGTTAACTCCACAACAAAAT+TGG | 0.252462 | 2_4:+13518090 | None:intergenic |
AACCTAGCCACTCAAGAATT+TGG | 0.269445 | 2_4:-13515671 | Msa0316410:CDS |
ATTTGTACTCACATTGAATA+TGG | 0.278079 | 2_4:-13518404 | Msa0316410:exon |
GAAAATGAGTCAGTTATTTC+GGG | 0.303023 | 2_4:-13519175 | Msa0316410:intron |
ACACTTGTCCCGCCACTAAC+TGG | 0.306497 | 2_4:+13517704 | None:intergenic |
ACAGGTGTTGGTTGACAATC+AGG | 0.319463 | 2_4:-13512667 | Msa0316410:intron |
AGGCAACCAGGGCCAATTCC+TGG | 0.339757 | 2_4:-13515635 | Msa0316410:CDS |
TGACTTTATCATCAGATTAT+GGG | 0.343251 | 2_4:-13517932 | Msa0316410:intron |
AGCCATACCGAATACTATTA+TGG | 0.354174 | 2_4:+13512526 | None:intergenic |
CGAAGCATTACTTGGCATAA+TGG | 0.359164 | 2_4:+13517614 | None:intergenic |
ACAACCTAATGCTGAGCTAT+TGG | 0.378542 | 2_4:-13518371 | Msa0316410:CDS |
CATTCCAATAGCTCAGCATT+AGG | 0.379458 | 2_4:+13518367 | None:intergenic |
AGGAATTGGCCCTGGTTGCC+TGG | 0.388603 | 2_4:+13515637 | None:intergenic |
CGGGACGGAGTTACGGGTTA+TGG | 0.388805 | 2_4:+13519483 | None:intergenic |
CTGCATCGGGACGGAGTTAC+GGG | 0.388938 | 2_4:+13519477 | None:intergenic |
ACAAATTTGTTGAAGACGTC+CGG | 0.389313 | 2_4:-13517760 | Msa0316410:CDS |
GCTCAGGGGTAGAAGCTCTT+TGG | 0.394805 | 2_4:+13517636 | None:intergenic |
GACAAGTGTTATTGCCTTTG+TGG | 0.403421 | 2_4:-13517690 | Msa0316410:CDS |
CAACAAAATTGGATGTTTCT+GGG | 0.414735 | 2_4:+13518101 | None:intergenic |
TTTGTGTTGAGGCCAGGAAT+TGG | 0.429061 | 2_4:+13515623 | None:intergenic |
ACAGGCTTTGGGTTTGAAGC+TGG | 0.434411 | 2_4:-13516087 | Msa0316410:intron |
ACTGCATCGGGACGGAGTTA+CGG | 0.438877 | 2_4:+13519476 | None:intergenic |
ACCTCGTATGATATTGGAAC+CGG | 0.439234 | 2_4:-13517906 | Msa0316410:CDS |
CTGCATGCTGTTTACCGTGT+TGG | 0.440891 | 2_4:-13518319 | Msa0316410:CDS |
TGTTGAAGACGTCCGGGCTA+AGG | 0.442242 | 2_4:-13517753 | Msa0316410:CDS |
GCATTGGCATATTTCTCCTC+TGG | 0.451229 | 2_4:+13518139 | None:intergenic |
GTTATCACCATAATAGTATT+CGG | 0.453121 | 2_4:-13512533 | Msa0316410:three_prime_UTR |
CACCAACACGAAGCATTACT+TGG | 0.453214 | 2_4:+13517606 | None:intergenic |
GGGGTGACCTCGTATGATAT+TGG | 0.454901 | 2_4:-13517912 | Msa0316410:CDS |
CAGTACACTTTAGCTATGCT+TGG | 0.464573 | 2_4:-13515924 | Msa0316410:CDS |
AGGGAGCCTGGTCCAGTTAG+TGG | 0.466212 | 2_4:-13517716 | Msa0316410:CDS |
ATTACTTGGCATAATGGCTC+AGG | 0.466397 | 2_4:+13517620 | None:intergenic |
CTCCAAATTCTTGAGTGGCT+AGG | 0.475358 | 2_4:+13515669 | None:intergenic |
GGAAAAGTCACTAGGGAGCC+TGG | 0.483177 | 2_4:-13517728 | Msa0316410:CDS |
ACAATCTTTGTGTTGAGGCC+AGG | 0.484223 | 2_4:+13515617 | None:intergenic |
TAATGCTGAGCTATTGGAAT+GGG | 0.497082 | 2_4:-13518365 | Msa0316410:CDS |
AAGAAGAATCTAGAAAATGA+AGG | 0.502457 | 2_4:+13519128 | None:intergenic |
CACCATAATAGTATTCGGTA+TGG | 0.505464 | 2_4:-13512528 | Msa0316410:three_prime_UTR |
TTGAGGCCAGGAATTGGCCC+TGG | 0.507618 | 2_4:+13515629 | None:intergenic |
AGTACACTTTAGCTATGCTT+GGG | 0.511040 | 2_4:-13515923 | Msa0316410:CDS |
GGGAAGATTACCAGGCAACC+AGG | 0.511775 | 2_4:-13515647 | Msa0316410:CDS |
GATAGCAAAATGTCCAAAAC+CGG | 0.515080 | 2_4:+13517887 | None:intergenic |
TTGGAGCTGACATATAACTA+TGG | 0.519451 | 2_4:-13515873 | Msa0316410:CDS |
CGTTACTCTCACTCACTCAC+TGG | 0.519612 | 2_4:-13519091 | Msa0316410:intron |
CTTTGGGTTTGAAGCTGGTG+AGG | 0.526621 | 2_4:-13516082 | Msa0316410:CDS |
GGTAAACAGCATGCAGGAAG+CGG | 0.528573 | 2_4:+13518326 | None:intergenic |
GTTGAAGACGTCCGGGCTAA+GGG | 0.529662 | 2_4:-13517752 | Msa0316410:CDS |
AATTTGGAGGGAAGATTACC+AGG | 0.531624 | 2_4:-13515655 | Msa0316410:CDS |
CTAAGGGTGGAAAAGTCACT+AGG | 0.534888 | 2_4:-13517736 | Msa0316410:CDS |
AGACGATATTGAACAGCAGT+TGG | 0.534915 | 2_4:-13512443 | Msa0316410:three_prime_UTR |
AAGAAACAATCTTTGTGTTG+AGG | 0.535327 | 2_4:+13515612 | None:intergenic |
TGTGAGTTAGTGACTGCATC+GGG | 0.537139 | 2_4:+13519464 | None:intergenic |
CTTTCTTAGATCCAGATGGA+TGG | 0.549136 | 2_4:-13515592 | Msa0316410:CDS |
GACTTTATCATCAGATTATG+GGG | 0.550340 | 2_4:-13517931 | Msa0316410:intron |
GCCAAATCCAAGAAAAGCAT+TGG | 0.551778 | 2_4:+13518123 | None:intergenic |
TGTATATAACAGGTTGCTGT+TGG | 0.553878 | 2_4:-13515728 | Msa0316410:intron |
AGTGGCTAGGTTGACTAACT+CGG | 0.554344 | 2_4:+13515682 | None:intergenic |
GGAACTGGAGTGAAGTGTGC+TGG | 0.554747 | 2_4:-13512634 | Msa0316410:exon |
AGCCTGGTCCAGTTAGTGGC+GGG | 0.557239 | 2_4:-13517712 | Msa0316410:CDS |
GCCTTTGTGGCAGATCCTGA+TGG | 0.566784 | 2_4:-13517677 | Msa0316410:CDS |
GTTTCTTTCTTAGATCCAGA+TGG | 0.569571 | 2_4:-13515596 | Msa0316410:CDS |
AAGGAGCTCACCTTGTATTG+AGG | 0.572668 | 2_4:+13516047 | None:intergenic |
CTAGCCACTCAAGAATTTGG+AGG | 0.575204 | 2_4:-13515668 | Msa0316410:CDS |
GGAGCACGAGACCATTGTGT+TGG | 0.578325 | 2_4:-13515892 | Msa0316410:CDS |
GAGCCTGGTCCAGTTAGTGG+CGG | 0.580023 | 2_4:-13517713 | Msa0316410:CDS |
CTAATGCTGAGCTATTGGAA+TGG | 0.580969 | 2_4:-13518366 | Msa0316410:CDS |
CAAATTTGTTGAAGACGTCC+GGG | 0.584145 | 2_4:-13517759 | Msa0316410:CDS |
CTTCCCTCCAAATTCTTGAG+TGG | 0.585863 | 2_4:+13515664 | None:intergenic |
TTTGTTCTCTACTCAAATCG+TGG | 0.586461 | 2_4:-13512491 | Msa0316410:three_prime_UTR |
GGGTTTGAAGCTGGTGAGGA+CGG | 0.590754 | 2_4:-13516078 | Msa0316410:CDS |
TTACTTGGCATAATGGCTCA+GGG | 0.593859 | 2_4:+13517621 | None:intergenic |
CAAGGGAAATGCTTATGCAC+AGG | 0.595183 | 2_4:-13515835 | Msa0316410:intron |
GTCCCGCCACTAACTGGACC+AGG | 0.596237 | 2_4:+13517710 | None:intergenic |
CTGTGCATAAGCATTTCCCT+TGG | 0.599109 | 2_4:+13515836 | None:intergenic |
GACGGAGTTACGGGTTATGG+TGG | 0.611611 | 2_4:+13519486 | None:intergenic |
GGAAGATTACCAGGCAACCA+GGG | 0.624129 | 2_4:-13515646 | Msa0316410:CDS |
ACCATCAGGATCTGCCACAA+AGG | 0.628314 | 2_4:+13517676 | None:intergenic |
ACTCACATTGAATATGGCTG+AGG | 0.630738 | 2_4:-13518398 | Msa0316410:exon |
GAAGACGTCCGGGCTAAGGG+TGG | 0.630896 | 2_4:-13517749 | Msa0316410:CDS |
TAGCCACTCAAGAATTTGGA+GGG | 0.631555 | 2_4:-13515667 | Msa0316410:CDS |
GATTAGAAAACATAACTACA+AGG | 0.635790 | 2_4:+13512380 | None:intergenic |
GGTTGATAGACCTCAATACA+AGG | 0.639705 | 2_4:-13516057 | Msa0316410:intron |
CAACACGGTAAACAGCATGC+AGG | 0.641511 | 2_4:+13518320 | None:intergenic |
AGTTAGTGACTGCATCGGGA+CGG | 0.646528 | 2_4:+13519468 | None:intergenic |
TGAGTGAGTGAGAGTAACGG+AGG | 0.651180 | 2_4:+13519095 | None:intergenic |
CAGTGAGTGAGTGAGAGTAA+CGG | 0.652559 | 2_4:+13519092 | None:intergenic |
AAGAATCTAGAAAATGAAGG+AGG | 0.653716 | 2_4:+13519131 | None:intergenic |
AGCTATGCTTGGGTACGCAG+AGG | 0.657919 | 2_4:-13515913 | Msa0316410:CDS |
TGCCAAGTAATGCTTCGTGT+TGG | 0.659311 | 2_4:-13517608 | Msa0316410:CDS |
TAGAGCAAGTACTGTGTACG+TGG | 0.667563 | 2_4:+13519433 | None:intergenic |
TTGTGAGTTAGTGACTGCAT+CGG | 0.676863 | 2_4:+13519463 | None:intergenic |
ATATGTCAGCTCCAACACAA+TGG | 0.688196 | 2_4:+13515881 | None:intergenic |
TAAGGGTGGAAAAGTCACTA+GGG | 0.688812 | 2_4:-13517735 | Msa0316410:CDS |
GGTGTCACTGAATACACCAA+GGG | 0.689964 | 2_4:-13515852 | Msa0316410:CDS |
TGGTGTCACTGAATACACCA+AGG | 0.696706 | 2_4:-13515853 | Msa0316410:CDS |
TACTTGGCATAATGGCTCAG+GGG | 0.711313 | 2_4:+13517622 | None:intergenic |
TACGATCAAGATCACCAACA+CGG | 0.718693 | 2_4:+13518305 | None:intergenic |
ACCGGTTCCAATATCATACG+AGG | 0.719788 | 2_4:+13517905 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCAATTTATAAAATTTAAGT+GGG | + | chr2_4:13514402-13514421 | None:intergenic | 10.0% |
!! | TTCAATTTATAAAATTTAAG+TGG | + | chr2_4:13514403-13514422 | None:intergenic | 10.0% |
!!! | TTTTATTTTTTTTAGAAGAA+TGG | - | chr2_4:13515530-13515549 | Msa0316410:intron | 10.0% |
!!! | TTTATTTTTTTTAGAAGAAT+GGG | - | chr2_4:13515531-13515550 | Msa0316410:intron | 10.0% |
!! | ATAATTATTTGTTTAAGAAA+AGG | - | chr2_4:13517028-13517047 | Msa0316410:intron | 10.0% |
!! | TAATTATTTGTTTAAGAAAA+GGG | - | chr2_4:13517029-13517048 | Msa0316410:intron | 10.0% |
!!! | ATAAATTTTTTCTTCATTTT+GGG | + | chr2_4:13518593-13518612 | None:intergenic | 10.0% |
!!! | TATAAATTTTTTCTTCATTT+TGG | + | chr2_4:13518594-13518613 | None:intergenic | 10.0% |
!! | AAATGAAGAAAAAATTTATA+TGG | - | chr2_4:13518594-13518613 | Msa0316410:intron | 10.0% |
!! | AATGAAGAAAAAATTTATAT+GGG | - | chr2_4:13518595-13518614 | Msa0316410:intron | 10.0% |
!! | TATTTAGTGTTATATTGTAT+TGG | - | chr2_4:13512526-13512545 | Msa0316410:three_prime_UTR | 15.0% |
!! | ATTTAGTGTTATATTGTATT+GGG | - | chr2_4:13512527-13512546 | Msa0316410:three_prime_UTR | 15.0% |
!! | AAATGATAAGAAAAGAAAAA+AGG | + | chr2_4:13513239-13513258 | None:intergenic | 15.0% |
!! | GACATATTAAATTATAACTA+TGG | - | chr2_4:13513371-13513390 | Msa0316410:intron | 15.0% |
!! | ATAAATGTTAAATTTCAGTA+AGG | + | chr2_4:13514779-13514798 | None:intergenic | 15.0% |
!!! | ATCTATTATTTATTTTTGCT+TGG | - | chr2_4:13515101-13515120 | Msa0316410:intron | 15.0% |
!!! | ATCTAAAAGTTTAACTTATT+AGG | - | chr2_4:13515395-13515414 | Msa0316410:intron | 15.0% |
!!! | AGTTAACAAAATAACAATTT+TGG | + | chr2_4:13515683-13515702 | None:intergenic | 15.0% |
!! | TTATTTATTTGCAAATCAAA+CGG | + | chr2_4:13516327-13516346 | None:intergenic | 15.0% |
!! | AAATAAATAAAAGATTTGAC+TGG | - | chr2_4:13516337-13516356 | Msa0316410:intron | 15.0% |
!! | TACACTATTCAAATAAAAAA+AGG | + | chr2_4:13516378-13516397 | None:intergenic | 15.0% |
!!! | TATGGTTTGAATATTTTTTT+TGG | - | chr2_4:13518199-13518218 | Msa0316410:intron | 15.0% |
!! | TTATCAACTGAAAATATTAA+AGG | + | chr2_4:13518796-13518815 | None:intergenic | 15.0% |
!!! | TAAGAAAAGTGTATAAATGA+AGG | - | chr2_4:13512461-13512480 | Msa0316410:three_prime_UTR | 20.0% |
!!! | AAGAAAAGTGTATAAATGAA+GGG | - | chr2_4:13512462-13512481 | Msa0316410:three_prime_UTR | 20.0% |
!! | AGTTGTATTGAAAATTGAAA+TGG | - | chr2_4:13512559-13512578 | Msa0316410:three_prime_UTR | 20.0% |
!!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr2_4:13512596-13512615 | Msa0316410:three_prime_UTR | 20.0% |
!! | CATAGTTTCATCATAATTAA+AGG | + | chr2_4:13512914-13512933 | None:intergenic | 20.0% |
!!! | ACAATAAGTTTTTGTGAATT+TGG | - | chr2_4:13513090-13513109 | Msa0316410:intron | 20.0% |
!!! | TAAATTATAACTATGGCTTT+TGG | - | chr2_4:13513378-13513397 | Msa0316410:intron | 20.0% |
!!! | CTCAATTAAGTTTTATGAAA+AGG | - | chr2_4:13514247-13514266 | Msa0316410:intron | 20.0% |
!! | ATTTCTATCATAATTCTTAC+AGG | - | chr2_4:13514327-13514346 | Msa0316410:intron | 20.0% |
!!! | ATCATTTCATTTTGATCTTA+GGG | + | chr2_4:13514547-13514566 | None:intergenic | 20.0% |
!!! | TATCATTTCATTTTGATCTT+AGG | + | chr2_4:13514548-13514567 | None:intergenic | 20.0% |
!! | AATGATTTACTTGTAAATCA+GGG | + | chr2_4:13514593-13514612 | None:intergenic | 20.0% |
!! | TAAACATTGTCAACATTAAA+AGG | + | chr2_4:13514743-13514762 | None:intergenic | 20.0% |
!! | ATTTATCTAGAAAAATGTGA+GGG | - | chr2_4:13514793-13514812 | Msa0316410:intron | 20.0% |
!!! | ACATAATAAATCGATGTTTT+AGG | + | chr2_4:13514881-13514900 | None:intergenic | 20.0% |
!!! | ATATCTCTATTATTTTTGCT+TGG | - | chr2_4:13514922-13514941 | Msa0316410:intron | 20.0% |
!!! | ACATAATAAATCGATGTTTT+AGG | + | chr2_4:13514881-13514900 | None:intergenic | 20.0% |
!! | AAAAAATCATAAGCAAAACA+TGG | + | chr2_4:13515853-13515872 | None:intergenic | 20.0% |
!! | TAAAAGTTAAACACAGAAAA+AGG | + | chr2_4:13516277-13516296 | None:intergenic | 20.0% |
!!! | TTTAACTTTTATGTTGAGTA+AGG | - | chr2_4:13516286-13516305 | Msa0316410:intron | 20.0% |
!! | ATAGATCATGTGTAATAAAT+AGG | + | chr2_4:13516513-13516532 | None:intergenic | 20.0% |
!! | CTATCTACATATATAACTTA+TGG | - | chr2_4:13516558-13516577 | Msa0316410:intron | 20.0% |
!! | CTAAAATAATTGGTGAATTA+TGG | - | chr2_4:13516800-13516819 | Msa0316410:intron | 20.0% |
!! | GTAGATATCAAATTACTAAT+TGG | - | chr2_4:13518357-13518376 | Msa0316410:CDS | 20.0% |
!! | AGATCAAGTAAATGTTATAA+TGG | + | chr2_4:13518424-13518443 | None:intergenic | 20.0% |
!! | AGAAAAAATTTATATGGGTT+TGG | - | chr2_4:13518600-13518619 | Msa0316410:intron | 20.0% |
!! | AGTATAAAAATTACATTCTC+TGG | + | chr2_4:13518717-13518736 | None:intergenic | 20.0% |
!!! | CAATATTTTCGTCTAATTAT+TGG | - | chr2_4:13518844-13518863 | Msa0316410:intron | 20.0% |
!! | TCTCAATATTAAAACATGAA+TGG | + | chr2_4:13518884-13518903 | None:intergenic | 20.0% |
!! | GATAGAATCAAAATCTTAAT+TGG | + | chr2_4:13518981-13519000 | None:intergenic | 20.0% |
!! | AGAAAAGTGTATAAATGAAG+GGG | - | chr2_4:13512463-13512482 | Msa0316410:three_prime_UTR | 25.0% |
!!! | TGAAATGGATCAGTTATTTT+AGG | - | chr2_4:13512574-13512593 | Msa0316410:three_prime_UTR | 25.0% |
!!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr2_4:13512595-13512614 | Msa0316410:three_prime_UTR | 25.0% |
! | AGAAAATGAGTCAGTTATTT+CGG | - | chr2_4:13512644-13512663 | Msa0316410:CDS | 25.0% |
! | AAGAAGAATCTAGAAAATGA+AGG | + | chr2_4:13512695-13512714 | None:intergenic | 25.0% |
! | AACACTGTAATTAACATGAT+CGG | + | chr2_4:13512886-13512905 | None:intergenic | 25.0% |
! | TTACATCAATGAATCATAGT+AGG | - | chr2_4:13513012-13513031 | Msa0316410:intron | 25.0% |
! | CATTTATTATCAAACAGTGT+TGG | - | chr2_4:13513254-13513273 | Msa0316410:intron | 25.0% |
! | GCATTATACAAATAGTGTAA+CGG | + | chr2_4:13513318-13513337 | None:intergenic | 25.0% |
!! | TACTGATTATGCTATTTACT+CGG | - | chr2_4:13513339-13513358 | Msa0316410:intron | 25.0% |
! | ATTTGTACTCACATTGAATA+TGG | - | chr2_4:13513416-13513435 | Msa0316410:intron | 25.0% |
! | TCAATCAAACATGCAATAAA+TGG | + | chr2_4:13513847-13513866 | None:intergenic | 25.0% |
! | ATGTTTGATTGAATTTGACA+TGG | - | chr2_4:13513855-13513874 | Msa0316410:intron | 25.0% |
! | ATGACTTTATCATCAGATTA+TGG | - | chr2_4:13513887-13513906 | Msa0316410:intron | 25.0% |
! | TGACTTTATCATCAGATTAT+GGG | - | chr2_4:13513888-13513907 | Msa0316410:intron | 25.0% |
! | CGTCAATTTCAGTATAAAAA+GGG | + | chr2_4:13514014-13514033 | None:intergenic | 25.0% |
! | ACGTCAATTTCAGTATAAAA+AGG | + | chr2_4:13514015-13514034 | None:intergenic | 25.0% |
! | ATTTCAAAAAGATAACCATC+AGG | + | chr2_4:13514161-13514180 | None:intergenic | 25.0% |
! | ATCAAAAGAACAAATTGACT+TGG | + | chr2_4:13514279-13514298 | None:intergenic | 25.0% |
! | AAGGTTAAATGTACAGAAAA+GGG | + | chr2_4:13514479-13514498 | None:intergenic | 25.0% |
! | AAAGGTTAAATGTACAGAAA+AGG | + | chr2_4:13514480-13514499 | None:intergenic | 25.0% |
! | GAATGATTTACTTGTAAATC+AGG | + | chr2_4:13514594-13514613 | None:intergenic | 25.0% |
! | CATTTATCTAGAAAAATGTG+AGG | - | chr2_4:13514792-13514811 | Msa0316410:intron | 25.0% |
! | AGGGATTAAGATTTAATTCT+AGG | - | chr2_4:13514812-13514831 | Msa0316410:intron | 25.0% |
! | AGATTTAATTCTAGGTAAGT+TGG | - | chr2_4:13514820-13514839 | Msa0316410:intron | 25.0% |
!! | TAGTTTATAGCATGTTACTT+GGG | + | chr2_4:13514853-13514872 | None:intergenic | 25.0% |
! | TTAGTTTATAGCATGTTACT+TGG | + | chr2_4:13514854-13514873 | None:intergenic | 25.0% |
!!! | AACATCGATTTATTATGTGA+AGG | - | chr2_4:13514883-13514902 | Msa0316410:intron | 25.0% |
!!! | AACATCGATTTATTATGTGA+AGG | - | chr2_4:13514883-13514902 | Msa0316410:intron | 25.0% |
! | TAAAAATCTCTTTCATCGAT+TGG | - | chr2_4:13515216-13515235 | Msa0316410:intron | 25.0% |
!! | TAGTATCAGAAATCTAGAAT+GGG | - | chr2_4:13515284-13515303 | Msa0316410:intron | 25.0% |
! | TATTAGGTAAAGTGCATAAA+TGG | - | chr2_4:13515411-13515430 | Msa0316410:intron | 25.0% |
! | AAAAAATTCAGCACAAAGTT+GGG | + | chr2_4:13515514-13515533 | None:intergenic | 25.0% |
! | TAAAAAATTCAGCACAAAGT+TGG | + | chr2_4:13515515-13515534 | None:intergenic | 25.0% |
!!! | TTTCTAAGATCAGTTAAGAA+AGG | + | chr2_4:13515795-13515814 | None:intergenic | 25.0% |
! | TGATCTTAGAAATCTACATA+CGG | - | chr2_4:13515803-13515822 | Msa0316410:intron | 25.0% |
! | CAAAGATACTAAGACATTAA+GGG | + | chr2_4:13516764-13516783 | None:intergenic | 25.0% |
! | ATGTAATATGCATAACATGT+AGG | - | chr2_4:13517054-13517073 | Msa0316410:intron | 25.0% |
! | ACGACCTAAAAATTTAAGTA+CGG | + | chr2_4:13517301-13517320 | None:intergenic | 25.0% |
! | TTGAATATTCTTAACGATAC+AGG | - | chr2_4:13518009-13518028 | Msa0316410:intron | 25.0% |
! | TGAATATTCTTAACGATACA+GGG | - | chr2_4:13518010-13518029 | Msa0316410:intron | 25.0% |
! | CAAAAAAATATAGAAGACTC+CGG | - | chr2_4:13518069-13518088 | Msa0316410:intron | 25.0% |
! | TTCGATAAAAGAATAGTCAT+GGG | - | chr2_4:13518095-13518114 | Msa0316410:CDS | 25.0% |
! | AAATATTCAAACCATAAACC+AGG | + | chr2_4:13518195-13518214 | None:intergenic | 25.0% |
!!! | TTACTATAGATGTTTTGACA+AGG | + | chr2_4:13518227-13518246 | None:intergenic | 25.0% |
! | ACATCTATAGTAAAACAGAT+TGG | - | chr2_4:13518234-13518253 | Msa0316410:intron | 25.0% |
! | TCTCAATGAGAAAAAAATGA+AGG | - | chr2_4:13518300-13518319 | Msa0316410:CDS | 25.0% |
! | ATGAGAAAAAAATGAAGGTA+AGG | - | chr2_4:13518305-13518324 | Msa0316410:CDS | 25.0% |
! | TGAGAAAAAAATGAAGGTAA+GGG | - | chr2_4:13518306-13518325 | Msa0316410:CDS | 25.0% |
! | ATCAAATTACTAATTGGTCA+AGG | - | chr2_4:13518363-13518382 | Msa0316410:CDS | 25.0% |
! | AATATGAACCTTATGAAAAG+AGG | + | chr2_4:13518645-13518664 | None:intergenic | 25.0% |
! | TTCATAAGGTTCATATTAGA+AGG | - | chr2_4:13518648-13518667 | Msa0316410:intron | 25.0% |
!! | CTAAACATCTTTTATACCAT+GGG | + | chr2_4:13518694-13518713 | None:intergenic | 25.0% |
! | TTAAAACATGAATGGCAAAA+AGG | + | chr2_4:13518876-13518895 | None:intergenic | 25.0% |
! | AATTGTGCTTTAGTATAAGA+AGG | - | chr2_4:13518916-13518935 | Msa0316410:intron | 25.0% |
! | ATCCACTTAAAAAAAACGTT+TGG | - | chr2_4:13519008-13519027 | Msa0316410:intron | 25.0% |
!! | TCATTTTGTATGCATTTTAC+AGG | - | chr2_4:13519135-13519154 | Msa0316410:five_prime_UTR | 25.0% |
! | GTTATCACCATAATAGTATT+CGG | - | chr2_4:13519287-13519306 | Msa0316410:intron | 25.0% |
! | GATTAGAAAACATAACTACA+AGG | + | chr2_4:13519443-13519462 | None:intergenic | 25.0% |
TCAAAGTAGGTCAATTATAC+CGG | + | chr2_4:13512427-13512446 | None:intergenic | 30.0% | |
TCTGTGTGAAAAATCAAAGT+AGG | + | chr2_4:13512440-13512459 | None:intergenic | 30.0% | |
!! | GAAAATGGGTCAGTTATTTT+AGG | - | chr2_4:13512610-13512629 | Msa0316410:three_prime_UTR | 30.0% |
! | GAAAATGAGTCAGTTATTTC+GGG | - | chr2_4:13512645-13512664 | Msa0316410:CDS | 30.0% |
AAGAATCTAGAAAATGAAGG+AGG | + | chr2_4:13512692-13512711 | None:intergenic | 30.0% | |
! | TTTTCATTTTGAACACGTGA+AGG | - | chr2_4:13512985-13513004 | Msa0316410:intron | 30.0% |
!!! | ATTTCTTTGCTTTTTCTCTC+AGG | - | chr2_4:13513610-13513629 | Msa0316410:intron | 30.0% |
! | AAATATGCCAATGCTTTTCT+TGG | - | chr2_4:13513690-13513709 | Msa0316410:intron | 30.0% |
CAACAAAATTGGATGTTTCT+GGG | + | chr2_4:13513722-13513741 | None:intergenic | 30.0% | |
ACAACAAAATTGGATGTTTC+TGG | + | chr2_4:13513723-13513742 | None:intergenic | 30.0% | |
! | AGAAACATCCAATTTTGTTG+TGG | - | chr2_4:13513722-13513741 | Msa0316410:intron | 30.0% |
AGTTAACTCCACAACAAAAT+TGG | + | chr2_4:13513733-13513752 | None:intergenic | 30.0% | |
ATGCAATAAATGGTAAGCAA+AGG | + | chr2_4:13513837-13513856 | None:intergenic | 30.0% | |
TCTGATGATAAAGTCATATG+TGG | + | chr2_4:13513884-13513903 | None:intergenic | 30.0% | |
GACTTTATCATCAGATTATG+GGG | - | chr2_4:13513889-13513908 | Msa0316410:intron | 30.0% | |
CAAATTTGTAGACCTAAAAG+TGG | + | chr2_4:13514049-13514068 | None:intergenic | 30.0% | |
CATTTAACCTTTACTTTCTG+CGG | - | chr2_4:13514488-13514507 | Msa0316410:intron | 30.0% | |
AAAATATCCGCAGAAAGTAA+AGG | + | chr2_4:13514498-13514517 | None:intergenic | 30.0% | |
! | TTTACTTTCTGCGGATATTT+TGG | - | chr2_4:13514497-13514516 | Msa0316410:intron | 30.0% |
!! | ATTTCATTTTGATCTTAGGG+AGG | + | chr2_4:13514544-13514563 | None:intergenic | 30.0% |
! | CACTTAATAGCTTAAGCTTT+TGG | + | chr2_4:13514663-13514682 | None:intergenic | 30.0% |
TTCACATTCCTCCTTAAAAT+GGG | + | chr2_4:13515142-13515161 | None:intergenic | 30.0% | |
ATTCACATTCCTCCTTAAAA+TGG | + | chr2_4:13515143-13515162 | None:intergenic | 30.0% | |
CAGTCAATTCATAGAAAGTT+GGG | + | chr2_4:13515244-13515263 | None:intergenic | 30.0% | |
TCAGTCAATTCATAGAAAGT+TGG | + | chr2_4:13515245-13515264 | None:intergenic | 30.0% | |
GTAGTATCAGAAATCTAGAA+TGG | - | chr2_4:13515283-13515302 | Msa0316410:intron | 30.0% | |
! | AGTATCAGAAATCTAGAATG+GGG | - | chr2_4:13515285-13515304 | Msa0316410:intron | 30.0% |
ATATATCAAAAGCAGTGTCA+CGG | + | chr2_4:13515343-13515362 | None:intergenic | 30.0% | |
AAAGTGCATAAATGGTTGAA+TGG | - | chr2_4:13515419-13515438 | Msa0316410:intron | 30.0% | |
CTGATGAATCAAATATGTTC+TGG | + | chr2_4:13515830-13515849 | None:intergenic | 30.0% | |
AAATGTGAAGATACCAGATT+AGG | + | chr2_4:13516046-13516065 | None:intergenic | 30.0% | |
AAGAAACAATCTTTGTGTTG+AGG | + | chr2_4:13516211-13516230 | None:intergenic | 30.0% | |
AAGTTACTGTACAACTGTTT+AGG | + | chr2_4:13516704-13516723 | None:intergenic | 30.0% | |
CCAAAGATACTAAGACATTA+AGG | + | chr2_4:13516765-13516784 | None:intergenic | 30.0% | |
CCTTAATGTCTTAGTATCTT+TGG | - | chr2_4:13516762-13516781 | Msa0316410:intron | 30.0% | |
GAATCACGAGCTAAAATAAT+TGG | - | chr2_4:13516790-13516809 | Msa0316410:intron | 30.0% | |
TGTACTTGGGTAAACATATT+TGG | + | chr2_4:13516972-13516991 | None:intergenic | 30.0% | |
TAATATGCATAACATGTAGG+AGG | - | chr2_4:13517057-13517076 | Msa0316410:intron | 30.0% | |
!!! | CTGGTATTAATTGTTTTTGC+AGG | + | chr2_4:13517097-13517116 | None:intergenic | 30.0% |
! | CTTAATTAGTCTAGACTTCA+AGG | + | chr2_4:13517122-13517141 | None:intergenic | 30.0% |
! | AATAGAGTTTCTAAAGAGCT+GGG | - | chr2_4:13517156-13517175 | Msa0316410:intron | 30.0% |
!!! | ACAGATATTTTTGGCAACAT+GGG | - | chr2_4:13517229-13517248 | Msa0316410:intron | 30.0% |
! | GTTGCCGTACTTAAATTTTT+AGG | - | chr2_4:13517294-13517313 | Msa0316410:intron | 30.0% |
!!! | ATTTTTTTGTCCTAGTCAAC+TGG | + | chr2_4:13518058-13518077 | None:intergenic | 30.0% |
! | CTATTCTTTTATCGAACTTC+CGG | + | chr2_4:13518091-13518110 | None:intergenic | 30.0% |
GTTCGATAAAAGAATAGTCA+TGG | - | chr2_4:13518094-13518113 | Msa0316410:CDS | 30.0% | |
TCGATAAAAGAATAGTCATG+GGG | - | chr2_4:13518096-13518115 | Msa0316410:CDS | 30.0% | |
TAGTAAAACAGATTGGAAGT+TGG | - | chr2_4:13518241-13518260 | Msa0316410:intron | 30.0% | |
ATCCAAGAAAAAAGTTGAAC+TGG | - | chr2_4:13518330-13518349 | Msa0316410:CDS | 30.0% | |
!!! | TACCAGTTCAACTTTTTTCT+TGG | + | chr2_4:13518335-13518354 | None:intergenic | 30.0% |
TGTCAATTTACAATCAAGTC+CGG | + | chr2_4:13518533-13518552 | None:intergenic | 30.0% | |
!!! | ATTAGTTTTATAGAGGAGAG+GGG | + | chr2_4:13518563-13518582 | None:intergenic | 30.0% |
!!! | CATTAGTTTTATAGAGGAGA+GGG | + | chr2_4:13518564-13518583 | None:intergenic | 30.0% |
!!! | CAAAGCCATTAGTTTTATAG+AGG | + | chr2_4:13518570-13518589 | None:intergenic | 30.0% |
! | ATTTATATGGGTTTGGTTCA+TGG | - | chr2_4:13518607-13518626 | Msa0316410:intron | 30.0% |
! | GCTAAACATCTTTTATACCA+TGG | + | chr2_4:13518695-13518714 | None:intergenic | 30.0% |
! | GCAGCATCTTATATTTTTCT+TGG | - | chr2_4:13518768-13518787 | Msa0316410:intron | 30.0% |
!!! | AGCCAAACGTTTTTTTTAAG+TGG | + | chr2_4:13519013-13519032 | None:intergenic | 30.0% |
AAAAAAAACGTTTGGCTATG+TGG | - | chr2_4:13519016-13519035 | Msa0316410:intron | 30.0% | |
AAAAAAACGTTTGGCTATGT+GGG | - | chr2_4:13519017-13519036 | Msa0316410:intron | 30.0% | |
GAAGAATCATATCACATACT+TGG | + | chr2_4:13519090-13519109 | None:intergenic | 30.0% | |
CAAAGTAGGTCAATTATACC+GGG | + | chr2_4:13512426-13512445 | None:intergenic | 35.0% | |
TGTATAAATGAAGGGGAAAG+TGG | - | chr2_4:13512470-13512489 | Msa0316410:three_prime_UTR | 35.0% | |
AGATCGTGAAAATATGAGAG+AGG | + | chr2_4:13512795-13512814 | None:intergenic | 35.0% | |
GTAATTAACATGATCGGACA+AGG | + | chr2_4:13512880-13512899 | None:intergenic | 35.0% | |
TAATGCTGAGCTATTGGAAT+GGG | - | chr2_4:13513455-13513474 | Msa0316410:intron | 35.0% | |
GAGAACTAAAACCTACTTGA+TGG | + | chr2_4:13513541-13513560 | None:intergenic | 35.0% | |
!!! | CAAGTAGGTTTTAGTTCTCT+TGG | - | chr2_4:13513542-13513561 | Msa0316410:intron | 35.0% |
! | AGGTTTTACACTGAAGCTTT+CGG | - | chr2_4:13513630-13513649 | Msa0316410:intron | 35.0% |
!! | TATGATATTGGAACCGGTTT+TGG | - | chr2_4:13513920-13513939 | Msa0316410:intron | 35.0% |
GATAGCAAAATGTCCAAAAC+CGG | + | chr2_4:13513936-13513955 | None:intergenic | 35.0% | |
AGTAGACTATAGCTTACATC+TGG | + | chr2_4:13513965-13513984 | None:intergenic | 35.0% | |
!! | TGAGTATCTCTTCCACTTTT+AGG | - | chr2_4:13514034-13514053 | Msa0316410:intron | 35.0% |
!! | ACAAATTTGTTGAAGACGTC+CGG | - | chr2_4:13514060-13514079 | Msa0316410:intron | 35.0% |
TGAAACTGAGATAAAAGCAG+AGG | + | chr2_4:13514354-13514373 | None:intergenic | 35.0% | |
ATTTACTTGTAAATCAGGGC+AGG | + | chr2_4:13514589-13514608 | None:intergenic | 35.0% | |
ATTATGTGAAGGCTCGTAAA+TGG | - | chr2_4:13514894-13514913 | Msa0316410:intron | 35.0% | |
! | TCATCCATTTTCCCCATTTT+AGG | - | chr2_4:13514948-13514967 | Msa0316410:intron | 35.0% |
! | CATCCATTTTCCCCATTTTA+GGG | - | chr2_4:13514949-13514968 | Msa0316410:intron | 35.0% |
TTCACATTCCTCCCTAAAAT+GGG | + | chr2_4:13514963-13514982 | None:intergenic | 35.0% | |
ATTCACATTCCTCCCTAAAA+TGG | + | chr2_4:13514964-13514983 | None:intergenic | 35.0% | |
ATTATGTGAAGGCTCGTAAA+TGG | - | chr2_4:13514894-13514913 | Msa0316410:intron | 35.0% | |
! | CATCCATTTTCCCCATTTTA+AGG | - | chr2_4:13514949-13514968 | Msa0316410:intron | 35.0% |
TCACATTCCTCCTTAAAATG+GGG | + | chr2_4:13515141-13515160 | None:intergenic | 35.0% | |
TTTATGTTTAACATGTCCCC+TGG | - | chr2_4:13515443-13515462 | Msa0316410:intron | 35.0% | |
ACCAACAAGAATCAGTATCT+GGG | - | chr2_4:13515554-13515573 | Msa0316410:intron | 35.0% | |
AGTATTGCTAGTTCATGACA+TGG | + | chr2_4:13515597-13515616 | None:intergenic | 35.0% | |
AATAGGATCCAGTAAGAACA+CGG | + | chr2_4:13515710-13515729 | None:intergenic | 35.0% | |
! | TTACTGGATCCTATTTTCAC+AGG | - | chr2_4:13515715-13515734 | Msa0316410:CDS | 35.0% |
! | ATCCTATTTTCACAGGCTTT+GGG | - | chr2_4:13515722-13515741 | Msa0316410:intron | 35.0% |
AGTACACTTTAGCTATGCTT+GGG | - | chr2_4:13515897-13515916 | Msa0316410:CDS | 35.0% | |
TTGGAGCTGACATATAACTA+TGG | - | chr2_4:13515947-13515966 | Msa0316410:intron | 35.0% | |
TACACCTTGATAAAACTGTG+AGG | - | chr2_4:13516069-13516088 | Msa0316410:CDS | 35.0% | |
!! | TACACCTCACAGTTTTATCA+AGG | + | chr2_4:13516076-13516095 | None:intergenic | 35.0% |
AACTGTGAGGTGTATATAAC+AGG | - | chr2_4:13516082-13516101 | Msa0316410:CDS | 35.0% | |
TGTATATAACAGGTTGCTGT+TGG | - | chr2_4:13516092-13516111 | Msa0316410:intron | 35.0% | |
GTTTCTTTCTTAGATCCAGA+TGG | - | chr2_4:13516224-13516243 | Msa0316410:intron | 35.0% | |
GAACACAATACAAGAAAGAG+TGG | - | chr2_4:13516400-13516419 | Msa0316410:intron | 35.0% | |
! | CCATTTGGTAACATGTCAAT+GGG | + | chr2_4:13516476-13516495 | None:intergenic | 35.0% |
! | TCCATTTGGTAACATGTCAA+TGG | + | chr2_4:13516477-13516496 | None:intergenic | 35.0% |
! | GCATGAATGTTTTGTCCATT+TGG | + | chr2_4:13516491-13516510 | None:intergenic | 35.0% |
!! | TGTTTAGGTTGTATGGTGTT+TGG | + | chr2_4:13516689-13516708 | None:intergenic | 35.0% |
!! | GTACAACTGTTTAGGTTGTA+TGG | + | chr2_4:13516696-13516715 | None:intergenic | 35.0% |
ACAGTTGTACAGTAACTTTG+TGG | - | chr2_4:13516706-13516725 | Msa0316410:intron | 35.0% | |
CAGTTGTACAGTAACTTTGT+GGG | - | chr2_4:13516707-13516726 | Msa0316410:intron | 35.0% | |
TTCAGTGTAATCACAAGTGT+CGG | - | chr2_4:13516901-13516920 | Msa0316410:intron | 35.0% | |
! | CAATAGAGTTTCTAAAGAGC+TGG | - | chr2_4:13517155-13517174 | Msa0316410:intron | 35.0% |
! | ATGGACCTCACAGATATTTT+TGG | - | chr2_4:13517220-13517239 | Msa0316410:intron | 35.0% |
TGTTGCCAAAAATATCTGTG+AGG | + | chr2_4:13517228-13517247 | None:intergenic | 35.0% | |
!!! | CACAGATATTTTTGGCAACA+TGG | - | chr2_4:13517228-13517247 | Msa0316410:intron | 35.0% |
!! | TCTTTCCCCCAATTTTAAAG+CGG | + | chr2_4:13517359-13517378 | None:intergenic | 35.0% |
!! | CTTTAAAATTGGGGGAAAGA+AGG | - | chr2_4:13517359-13517378 | Msa0316410:intron | 35.0% |
CTGTTAAGAGTCCTACTTTA+AGG | - | chr2_4:13517462-13517481 | Msa0316410:intron | 35.0% | |
TGTATTCCATGCCTTAAAGT+AGG | + | chr2_4:13517476-13517495 | None:intergenic | 35.0% | |
! | AGGCATGGAATACAACATTT+TGG | - | chr2_4:13517482-13517501 | Msa0316410:intron | 35.0% |
! | CATGGAATACAACATTTTGG+TGG | - | chr2_4:13517485-13517504 | Msa0316410:intron | 35.0% |
!! | AATACAACATTTTGGTGGCA+AGG | - | chr2_4:13517490-13517509 | Msa0316410:intron | 35.0% |
CACAAACAACTTGGATTACA+AGG | + | chr2_4:13517865-13517884 | None:intergenic | 35.0% | |
AATCCAAGTTGTTTGTGATC+TGG | - | chr2_4:13517868-13517887 | Msa0316410:intron | 35.0% | |
CTCTACAAATATACGACAAG+TGG | + | chr2_4:13517930-13517949 | None:intergenic | 35.0% | |
CACTTGTCGTATATTTGTAG+AGG | - | chr2_4:13517928-13517947 | Msa0316410:intron | 35.0% | |
TATAAAACCTACAACCATCC+CGG | + | chr2_4:13517987-13518006 | None:intergenic | 35.0% | |
ATGCATGAGATTAAAGGTCA+TGG | + | chr2_4:13518163-13518182 | None:intergenic | 35.0% | |
CTGAAGATGCATGAGATTAA+AGG | + | chr2_4:13518169-13518188 | None:intergenic | 35.0% | |
ATCTTCAGAATCCTGGTTTA+TGG | - | chr2_4:13518181-13518200 | Msa0316410:CDS | 35.0% | |
AGATTGGAAGTTGGAACTAT+TGG | - | chr2_4:13518250-13518269 | Msa0316410:intron | 35.0% | |
GATTGGAAGTTGGAACTATT+GGG | - | chr2_4:13518251-13518270 | Msa0316410:intron | 35.0% | |
ATTTGAATAGCAAAGGTTGG+AGG | + | chr2_4:13518394-13518413 | None:intergenic | 35.0% | |
TGCATTTGAATAGCAAAGGT+TGG | + | chr2_4:13518397-13518416 | None:intergenic | 35.0% | |
ACAGTGCATTTGAATAGCAA+AGG | + | chr2_4:13518401-13518420 | None:intergenic | 35.0% | |
GTCAATTTACAATCAAGTCC+GGG | + | chr2_4:13518532-13518551 | None:intergenic | 35.0% | |
!!! | CCATTAGTTTTATAGAGGAG+AGG | + | chr2_4:13518565-13518584 | None:intergenic | 35.0% |
CCTCTCCTCTATAAAACTAA+TGG | - | chr2_4:13518562-13518581 | Msa0316410:intron | 35.0% | |
CCTTATGAAAAGAGGTTCAA+AGG | + | chr2_4:13518637-13518656 | None:intergenic | 35.0% | |
! | CCTTTGAACCTCTTTTCATA+AGG | - | chr2_4:13518634-13518653 | Msa0316410:intron | 35.0% |
ATATTAGAAGGTCCCACAAA+TGG | - | chr2_4:13518660-13518679 | Msa0316410:intron | 35.0% | |
TGGGAAACTAAACCATTTGT+GGG | + | chr2_4:13518675-13518694 | None:intergenic | 35.0% | |
ATGGGAAACTAAACCATTTG+TGG | + | chr2_4:13518676-13518695 | None:intergenic | 35.0% | |
! | ACAAATGGTTTAGTTTCCCA+TGG | - | chr2_4:13518675-13518694 | Msa0316410:intron | 35.0% |
!!! | TACTTTTTGACTTAGTACCG+TGG | - | chr2_4:13518733-13518752 | Msa0316410:intron | 35.0% |
TGCTTTAGTATAAGAAGGCA+TGG | - | chr2_4:13518921-13518940 | Msa0316410:intron | 35.0% | |
! | TGTATGCATTTTACAGGTGT+TGG | - | chr2_4:13519141-13519160 | Msa0316410:five_prime_UTR | 35.0% |
! | TGACAATCAGGATTTTCTGA+AGG | - | chr2_4:13519165-13519184 | Msa0316410:five_prime_UTR | 35.0% |
CACCATAATAGTATTCGGTA+TGG | - | chr2_4:13519292-13519311 | Msa0316410:intron | 35.0% | |
AGCCATACCGAATACTATTA+TGG | + | chr2_4:13519297-13519316 | None:intergenic | 35.0% | |
!! | TTCGGTATGGCTTTTTAAAG+TGG | - | chr2_4:13519305-13519324 | Msa0316410:intron | 35.0% |
TTTGTTCTCTACTCAAATCG+TGG | - | chr2_4:13519329-13519348 | Msa0316410:intron | 35.0% | |
TTGTGAGTTAGTGACTGCAT+CGG | + | chr2_4:13512360-13512379 | None:intergenic | 40.0% | |
AGAGAGAAAGAGGAAAGAGT+AGG | + | chr2_4:13512757-13512776 | None:intergenic | 40.0% | |
CCTAAATTGCAGAGAGAAAG+AGG | + | chr2_4:13512767-13512786 | None:intergenic | 40.0% | |
CCTCTTTCTCTCTGCAATTT+AGG | - | chr2_4:13512764-13512783 | Msa0316410:intron | 40.0% | |
ACTCACATTGAATATGGCTG+AGG | - | chr2_4:13513422-13513441 | Msa0316410:intron | 40.0% | |
ACAACCTAATGCTGAGCTAT+TGG | - | chr2_4:13513449-13513468 | Msa0316410:intron | 40.0% | |
CATTCCAATAGCTCAGCATT+AGG | + | chr2_4:13513456-13513475 | None:intergenic | 40.0% | |
CTAATGCTGAGCTATTGGAA+TGG | - | chr2_4:13513454-13513473 | Msa0316410:intron | 40.0% | |
TACGATCAAGATCACCAACA+CGG | + | chr2_4:13513518-13513537 | None:intergenic | 40.0% | |
TCTTGATCGTACCATCAAGT+AGG | - | chr2_4:13513527-13513546 | Msa0316410:intron | 40.0% | |
GTGATGCAATGTGTGTTTAG+AGG | - | chr2_4:13513576-13513595 | Msa0316410:intron | 40.0% | |
GAGAAAAAGAGATGTTCCAG+AGG | - | chr2_4:13513665-13513684 | Msa0316410:intron | 40.0% | |
! | GCCAATGCTTTTCTTGGATT+TGG | - | chr2_4:13513696-13513715 | Msa0316410:intron | 40.0% |
! | GCCAAATCCAAGAAAAGCAT+TGG | + | chr2_4:13513700-13513719 | None:intergenic | 40.0% |
ACCTCGTATGATATTGGAAC+CGG | - | chr2_4:13513914-13513933 | Msa0316410:intron | 40.0% | |
!! | CAAATTTGTTGAAGACGTCC+GGG | - | chr2_4:13514061-13514080 | Msa0316410:intron | 40.0% |
TAAGGGTGGAAAAGTCACTA+GGG | - | chr2_4:13514085-13514104 | Msa0316410:intron | 40.0% | |
! | GACAAGTGTTATTGCCTTTG+TGG | - | chr2_4:13514130-13514149 | Msa0316410:intron | 40.0% |
TTACTTGGCATAATGGCTCA+GGG | + | chr2_4:13514202-13514221 | None:intergenic | 40.0% | |
ATTACTTGGCATAATGGCTC+AGG | + | chr2_4:13514203-13514222 | None:intergenic | 40.0% | |
! | CGAAGCATTACTTGGCATAA+TGG | + | chr2_4:13514209-13514228 | None:intergenic | 40.0% |
!! | GTAGAGTTGACTAGTTTGAC+AGG | + | chr2_4:13514717-13514736 | None:intergenic | 40.0% |
GTCAAACTAGTCAACTCTAC+TGG | - | chr2_4:13514717-13514736 | Msa0316410:intron | 40.0% | |
! | ATTCTAGGTAAGTTGGACAG+AGG | - | chr2_4:13514827-13514846 | Msa0316410:intron | 40.0% |
TCACATTCCTCCCTAAAATG+GGG | + | chr2_4:13514962-13514981 | None:intergenic | 40.0% | |
GTGAATCCCTTGAGATGAAT+TGG | - | chr2_4:13514978-13514997 | Msa0316410:intron | 40.0% | |
ACACGTCCAATTCATCTCAA+GGG | + | chr2_4:13514987-13515006 | None:intergenic | 40.0% | |
TACACGTCCAATTCATCTCA+AGG | + | chr2_4:13514988-13515007 | None:intergenic | 40.0% | |
TTGGACGTGTAGTGTTTAGT+TGG | - | chr2_4:13514997-13515016 | Msa0316410:intron | 40.0% | |
TGTAGTGTTTAGTTGGACAG+AGG | - | chr2_4:13515004-13515023 | Msa0316410:intron | 40.0% | |
CCTCCTTAAAATGGGGAAAA+TGG | + | chr2_4:13515134-13515153 | None:intergenic | 40.0% | |
!! | CCATTTTCCCCATTTTAAGG+AGG | - | chr2_4:13515131-13515150 | Msa0316410:intron | 40.0% |
GTGAATCCCTTGAGATGAAT+TGG | - | chr2_4:13514978-13514997 | Msa0316410:intron | 40.0% | |
ACACGTCCAATTCATCTCAA+GGG | + | chr2_4:13514987-13515006 | None:intergenic | 40.0% | |
TACACGTCCAATTCATCTCA+AGG | + | chr2_4:13514988-13515007 | None:intergenic | 40.0% | |
ATCCACACTTCAAGCTTGAT+GGG | + | chr2_4:13515477-13515496 | None:intergenic | 40.0% | |
TTGAAGTGTGGATGACGAAT+AGG | - | chr2_4:13515484-13515503 | Msa0316410:intron | 40.0% | |
AATTCAGCACAAAGTTGGGT+GGG | + | chr2_4:13515510-13515529 | None:intergenic | 40.0% | |
AAATTCAGCACAAAGTTGGG+TGG | + | chr2_4:13515511-13515530 | None:intergenic | 40.0% | |
GACCAACAAGAATCAGTATC+TGG | - | chr2_4:13515553-13515572 | Msa0316410:intron | 40.0% | |
!! | ACCCAGATACTGATTCTTGT+TGG | + | chr2_4:13515558-13515577 | None:intergenic | 40.0% |
AACTAAGACCGTGTTCTTAC+TGG | - | chr2_4:13515699-13515718 | Msa0316410:CDS | 40.0% | |
! | GATCCTATTTTCACAGGCTT+TGG | - | chr2_4:13515721-13515740 | Msa0316410:intron | 40.0% |
AACCCAAAGCCTGTGAAAAT+AGG | + | chr2_4:13515727-13515746 | None:intergenic | 40.0% | |
!! | GGTTGATAGACCTCAATACA+AGG | - | chr2_4:13515763-13515782 | Msa0316410:intron | 40.0% |
AAAGTGTACTGTAGGATGTG+CGG | + | chr2_4:13515887-13515906 | None:intergenic | 40.0% | |
GCATAGCTAAAGTGTACTGT+AGG | + | chr2_4:13515895-13515914 | None:intergenic | 40.0% | |
CAGTACACTTTAGCTATGCT+TGG | - | chr2_4:13515896-13515915 | Msa0316410:CDS | 40.0% | |
ATATGTCAGCTCCAACACAA+TGG | + | chr2_4:13515942-13515961 | None:intergenic | 40.0% | |
GATTAGGCTTCTAGTCTAGA+AGG | + | chr2_4:13516030-13516049 | None:intergenic | 40.0% | |
TCTAGACTAGAAGCCTAATC+TGG | - | chr2_4:13516030-13516049 | Msa0316410:intron | 40.0% | |
AACCTAGCCACTCAAGAATT+TGG | - | chr2_4:13516149-13516168 | Msa0316410:intron | 40.0% | |
TAGCCACTCAAGAATTTGGA+GGG | - | chr2_4:13516153-13516172 | Msa0316410:intron | 40.0% | |
AATTTGGAGGGAAGATTACC+AGG | - | chr2_4:13516165-13516184 | Msa0316410:intron | 40.0% | |
CTTTCTTAGATCCAGATGGA+TGG | - | chr2_4:13516228-13516247 | Msa0316410:intron | 40.0% | |
GTAGTTTAGACTATTGTCCC+TGG | - | chr2_4:13516422-13516441 | Msa0316410:intron | 40.0% | |
AAACTAGTTGTCCCGTGATT+TGG | + | chr2_4:13516453-13516472 | None:intergenic | 40.0% | |
CCCATTGACATGTTACCAAA+TGG | - | chr2_4:13516473-13516492 | Msa0316410:intron | 40.0% | |
! | TTAGGTTGTATGGTGTTTGG+TGG | + | chr2_4:13516686-13516705 | None:intergenic | 40.0% |
ATGTTTACCCAAGTACACTG+TGG | - | chr2_4:13516975-13516994 | Msa0316410:intron | 40.0% | |
ATTACAGCCACAGTGTACTT+GGG | + | chr2_4:13516985-13517004 | None:intergenic | 40.0% | |
AATTACAGCCACAGTGTACT+TGG | + | chr2_4:13516986-13517005 | None:intergenic | 40.0% | |
! | ATGTAGGAGGTTGCTTTAAC+TGG | - | chr2_4:13517070-13517089 | Msa0316410:intron | 40.0% |
TAGTCTAGACTTCAAGGTTC+TGG | + | chr2_4:13517116-13517135 | None:intergenic | 40.0% | |
AAGAGCTGGGATGTAAATCA+AGG | - | chr2_4:13517169-13517188 | Msa0316410:intron | 40.0% | |
ATATCTGTGAGGTCCATGAT+TGG | + | chr2_4:13517217-13517236 | None:intergenic | 40.0% | |
!! | ATGTGTCCCCGCTTTAAAAT+TGG | - | chr2_4:13517348-13517367 | Msa0316410:intron | 40.0% |
!! | TGTGTCCCCGCTTTAAAATT+GGG | - | chr2_4:13517349-13517368 | Msa0316410:intron | 40.0% |
!!! | TTTCCCCCAATTTTAAAGCG+GGG | + | chr2_4:13517357-13517376 | None:intergenic | 40.0% |
!!! | CTTTCCCCCAATTTTAAAGC+GGG | + | chr2_4:13517358-13517377 | None:intergenic | 40.0% |
CCTTCTATTCGTTTAGGCTA+TGG | + | chr2_4:13517396-13517415 | None:intergenic | 40.0% | |
CCATAGCCTAAACGAATAGA+AGG | - | chr2_4:13517393-13517412 | Msa0316410:intron | 40.0% | |
TAGCCTAAACGAATAGAAGG+AGG | - | chr2_4:13517396-13517415 | Msa0316410:intron | 40.0% | |
!! | AAGAGTCCTACTTTAAGGCA+TGG | - | chr2_4:13517467-13517486 | Msa0316410:intron | 40.0% |
!! | CATTTTGGTGGCAAGGAAAA+TGG | - | chr2_4:13517497-13517516 | Msa0316410:intron | 40.0% |
! | GTTTTGCCATGACGCTTAAA+TGG | - | chr2_4:13517524-13517543 | Msa0316410:intron | 40.0% |
GGAGTAGTTCAAACCTAGAA+CGG | - | chr2_4:13517747-13517766 | Msa0316410:CDS | 40.0% | |
TTCATTTCTGTCTCCGTTCT+AGG | + | chr2_4:13517763-13517782 | None:intergenic | 40.0% | |
!! | TGTGTTAGTTGTGGCTTTGA+TGG | - | chr2_4:13517794-13517813 | Msa0316410:intron | 40.0% |
CCTACAATCAAACCAACATG+TGG | + | chr2_4:13517842-13517861 | None:intergenic | 40.0% | |
!! | CCACATGTTGGTTTGATTGT+AGG | - | chr2_4:13517839-13517858 | Msa0316410:intron | 40.0% |
CTTCCAGATCACAAACAACT+TGG | + | chr2_4:13517874-13517893 | None:intergenic | 40.0% | |
TGTTTGTGATCTGGAAGACA+TGG | - | chr2_4:13517877-13517896 | Msa0316410:CDS | 40.0% | |
GTTTGTGATCTGGAAGACAT+GGG | - | chr2_4:13517878-13517897 | Msa0316410:CDS | 40.0% | |
AATAGTCATGGGGCAATACT+GGG | - | chr2_4:13518106-13518125 | Msa0316410:CDS | 40.0% | |
! | GCTTTCTGCATTTTACTGGT+TGG | + | chr2_4:13518141-13518160 | None:intergenic | 40.0% |
! | CATGGCTTTCTGCATTTTAC+TGG | + | chr2_4:13518145-13518164 | None:intergenic | 40.0% |
TGGGAAGTAATGTATGTAGC+CGG | - | chr2_4:13518270-13518289 | Msa0316410:intron | 40.0% | |
TTCTCATTGAGAACTCTACC+CGG | + | chr2_4:13518292-13518311 | None:intergenic | 40.0% | |
CACTTAGGGAATGAGACAAA+GGG | + | chr2_4:13518460-13518479 | None:intergenic | 40.0% | |
ACACTTAGGGAATGAGACAA+AGG | + | chr2_4:13518461-13518480 | None:intergenic | 40.0% | |
CTAGAGACTTGTCACACTTA+GGG | + | chr2_4:13518474-13518493 | None:intergenic | 40.0% | |
ACTAGAGACTTGTCACACTT+AGG | + | chr2_4:13518475-13518494 | None:intergenic | 40.0% | |
!! | TCAGGATTTTCTGAAGGAAC+TGG | - | chr2_4:13519171-13519190 | Msa0316410:intron | 40.0% |
AGACGATATTGAACAGCAGT+TGG | - | chr2_4:13519377-13519396 | Msa0316410:intron | 40.0% | |
TGTGAGTTAGTGACTGCATC+GGG | + | chr2_4:13512359-13512378 | None:intergenic | 45.0% | |
! | TAGAGCAAGTACTGTGTACG+TGG | + | chr2_4:13512390-13512409 | None:intergenic | 45.0% |
GTAGGTCAATTATACCGGGA+CGG | + | chr2_4:13512422-13512441 | None:intergenic | 45.0% | |
CAGTGAGTGAGTGAGAGTAA+CGG | + | chr2_4:13512731-13512750 | None:intergenic | 45.0% | |
! | GCATTGGCATATTTCTCCTC+TGG | + | chr2_4:13513684-13513703 | None:intergenic | 45.0% |
! | ACCGGTTCCAATATCATACG+AGG | + | chr2_4:13513918-13513937 | None:intergenic | 45.0% |
CTAAGGGTGGAAAAGTCACT+AGG | - | chr2_4:13514084-13514103 | Msa0316410:intron | 45.0% | |
TACTTGGCATAATGGCTCAG+GGG | + | chr2_4:13514201-13514220 | None:intergenic | 45.0% | |
TGCCAAGTAATGCTTCGTGT+TGG | - | chr2_4:13514212-13514231 | Msa0316410:intron | 45.0% | |
! | CACCAACACGAAGCATTACT+TGG | + | chr2_4:13514217-13514236 | None:intergenic | 45.0% |
AAATCAGGGCAGGAGTTCAT+TGG | + | chr2_4:13514579-13514598 | None:intergenic | 45.0% | |
CCTCCCTAAAATGGGGAAAA+TGG | + | chr2_4:13514955-13514974 | None:intergenic | 45.0% | |
!! | CCATTTTCCCCATTTTAGGG+AGG | - | chr2_4:13514952-13514971 | Msa0316410:intron | 45.0% |
CATCCACACTTCAAGCTTGA+TGG | + | chr2_4:13515478-13515497 | None:intergenic | 45.0% | |
AAGGAGCTCACCTTGTATTG+AGG | + | chr2_4:13515776-13515795 | None:intergenic | 45.0% | |
!! | TGGTGTCACTGAATACACCA+AGG | - | chr2_4:13515967-13515986 | Msa0316410:intron | 45.0% |
!! | GGTGTCACTGAATACACCAA+GGG | - | chr2_4:13515968-13515987 | Msa0316410:intron | 45.0% |
CTGTGCATAAGCATTTCCCT+TGG | + | chr2_4:13515987-13516006 | None:intergenic | 45.0% | |
CAAGGGAAATGCTTATGCAC+AGG | - | chr2_4:13515985-13516004 | Msa0316410:intron | 45.0% | |
! | AGTGGCTAGGTTGACTAACT+CGG | + | chr2_4:13516141-13516160 | None:intergenic | 45.0% |
CTCCAAATTCTTGAGTGGCT+AGG | + | chr2_4:13516154-13516173 | None:intergenic | 45.0% | |
CTAGCCACTCAAGAATTTGG+AGG | - | chr2_4:13516152-13516171 | Msa0316410:intron | 45.0% | |
CTTCCCTCCAAATTCTTGAG+TGG | + | chr2_4:13516159-13516178 | None:intergenic | 45.0% | |
TTTGTGTTGAGGCCAGGAAT+TGG | + | chr2_4:13516200-13516219 | None:intergenic | 45.0% | |
ACAATCTTTGTGTTGAGGCC+AGG | + | chr2_4:13516206-13516225 | None:intergenic | 45.0% | |
! | CTCACAGTTTTCCATCCATC+TGG | + | chr2_4:13516242-13516261 | None:intergenic | 45.0% |
TTGAGTAAGGCTGCGACTTA+GGG | - | chr2_4:13516299-13516318 | Msa0316410:intron | 45.0% | |
!! | AGTTGTCCCGTGATTTGGTA+AGG | + | chr2_4:13516448-13516467 | None:intergenic | 45.0% |
!! | GTAATCACAAGTGTCGGTGT+CGG | - | chr2_4:13516907-13516926 | Msa0316410:intron | 45.0% |
GCACGAACACTTCTGATTGA+AGG | + | chr2_4:13516946-13516965 | None:intergenic | 45.0% | |
!! | GTGTCCCCGCTTTAAAATTG+GGG | - | chr2_4:13517350-13517369 | Msa0316410:intron | 45.0% |
!! | TGTCCCCGCTTTAAAATTGG+GGG | - | chr2_4:13517351-13517370 | Msa0316410:intron | 45.0% |
CCACCTCCTTCTATTCGTTT+AGG | + | chr2_4:13517402-13517421 | None:intergenic | 45.0% | |
CCTAAACGAATAGAAGGAGG+TGG | - | chr2_4:13517399-13517418 | Msa0316410:intron | 45.0% | |
AACGAATAGAAGGAGGTGGA+TGG | - | chr2_4:13517403-13517422 | Msa0316410:intron | 45.0% | |
ACGAATAGAAGGAGGTGGAT+GGG | - | chr2_4:13517404-13517423 | Msa0316410:intron | 45.0% | |
TGGTGGCAAGGAAAATGGAA+AGG | - | chr2_4:13517502-13517521 | Msa0316410:intron | 45.0% | |
TGCCATGACGCTTAAATGGA+AGG | - | chr2_4:13517528-13517547 | Msa0316410:intron | 45.0% | |
CACCTTCCATTTAAGCGTCA+TGG | + | chr2_4:13517533-13517552 | None:intergenic | 45.0% | |
CATGACGCTTAAATGGAAGG+TGG | - | chr2_4:13517531-13517550 | Msa0316410:intron | 45.0% | |
! | TAACCACGAAGCTCCAGTTT+TGG | - | chr2_4:13517568-13517587 | Msa0316410:intron | 45.0% |
AGCACAATTTCGGCCAAAAC+TGG | + | chr2_4:13517584-13517603 | None:intergenic | 45.0% | |
!! | GTTTTGGCCGAAATTGTGCT+TGG | - | chr2_4:13517584-13517603 | Msa0316410:CDS | 45.0% |
ACTGCCTCCAAGCACAATTT+CGG | + | chr2_4:13517594-13517613 | None:intergenic | 45.0% | |
AGTGGAAAAGTCGGATGAAG+TGG | - | chr2_4:13517611-13517630 | Msa0316410:CDS | 45.0% | |
GATGAAGTGGCAGCATCTTT+GGG | - | chr2_4:13517624-13517643 | Msa0316410:CDS | 45.0% | |
TGTCCTTGCTGAGCATGAAA+TGG | - | chr2_4:13517675-13517694 | Msa0316410:CDS | 45.0% | |
GTCCTTGCTGAGCATGAAAT+GGG | - | chr2_4:13517676-13517695 | Msa0316410:CDS | 45.0% | |
TTGCTGAGCATGAAATGGGT+GGG | - | chr2_4:13517680-13517699 | Msa0316410:CDS | 45.0% | |
ATAGGTAAGCTTGTGGTCGA+AGG | - | chr2_4:13517705-13517724 | Msa0316410:CDS | 45.0% | |
GAAGGAGGTGGAAAAAGGAA+GGG | - | chr2_4:13517723-13517742 | Msa0316410:CDS | 45.0% | |
AAGGAGGTGGAAAAAGGAAG+GGG | - | chr2_4:13517724-13517743 | Msa0316410:CDS | 45.0% | |
AACGGAGACAGAAATGAAGC+TGG | - | chr2_4:13517765-13517784 | Msa0316410:CDS | 45.0% | |
TGGAGGAGTTGTGTTAGTTG+TGG | - | chr2_4:13517785-13517804 | Msa0316410:intron | 45.0% | |
!! | TGTGGCTTTGATGGAGAGAT+TGG | - | chr2_4:13517803-13517822 | Msa0316410:intron | 45.0% |
CAACATGTGGATCTTCCATC+AGG | + | chr2_4:13517829-13517848 | None:intergenic | 45.0% | |
CTGATGGAAGATCCACATGT+TGG | - | chr2_4:13517827-13517846 | Msa0316410:intron | 45.0% | |
! | TTTGTAGAGGTGTGAAGAGC+TGG | - | chr2_4:13517941-13517960 | Msa0316410:intron | 45.0% |
! | TTGTAGAGGTGTGAAGAGCT+GGG | - | chr2_4:13517942-13517961 | Msa0316410:intron | 45.0% |
AAAAATCAGCCCTTCTCTGC+CGG | - | chr2_4:13517965-13517984 | Msa0316410:intron | 45.0% | |
GAATAGTCATGGGGCAATAC+TGG | - | chr2_4:13518105-13518124 | Msa0316410:CDS | 45.0% | |
ATAGTCATGGGGCAATACTG+GGG | - | chr2_4:13518107-13518126 | Msa0316410:CDS | 45.0% | |
CTCATGCATCTTCAGAATCC+TGG | - | chr2_4:13518174-13518193 | Msa0316410:CDS | 45.0% | |
GGGAAGTAATGTATGTAGCC+GGG | - | chr2_4:13518271-13518290 | Msa0316410:intron | 45.0% | |
ATGAGACAAAGGGACGAGAA+TGG | + | chr2_4:13518450-13518469 | None:intergenic | 45.0% | |
GCTGCTCAGAATGAATTCCA+CGG | + | chr2_4:13518753-13518772 | None:intergenic | 45.0% | |
!! | ACAGGTGTTGGTTGACAATC+AGG | - | chr2_4:13519153-13519172 | Msa0316410:five_prime_UTR | 45.0% |
!! | AATTCAAATAAAAAAATTAA+AGG | + | chr2_4:13513068-13513087 | None:intergenic | 5.0% |
AGTTAGTGACTGCATCGGGA+CGG | + | chr2_4:13512355-13512374 | None:intergenic | 50.0% | |
GTCAATTATACCGGGACGGA+TGG | + | chr2_4:13512418-13512437 | None:intergenic | 50.0% | |
TGAGTGAGTGAGAGTAACGG+AGG | + | chr2_4:13512728-13512747 | None:intergenic | 50.0% | |
CGTTACTCTCACTCACTCAC+TGG | - | chr2_4:13512729-13512748 | Msa0316410:intron | 50.0% | |
GGTAAACAGCATGCAGGAAG+CGG | + | chr2_4:13513497-13513516 | None:intergenic | 50.0% | |
CAACACGGTAAACAGCATGC+AGG | + | chr2_4:13513503-13513522 | None:intergenic | 50.0% | |
! | CTGCATGCTGTTTACCGTGT+TGG | - | chr2_4:13513501-13513520 | Msa0316410:intron | 50.0% |
GGGGTGACCTCGTATGATAT+TGG | - | chr2_4:13513908-13513927 | Msa0316410:intron | 50.0% | |
! | TGACTTTTCCACCCTTAGCC+CGG | + | chr2_4:13514082-13514101 | None:intergenic | 50.0% |
ACCATCAGGATCTGCCACAA+AGG | + | chr2_4:13514147-13514166 | None:intergenic | 50.0% | |
AGCCCATCAAGCTTGAAGTG+TGG | - | chr2_4:13515472-13515491 | Msa0316410:intron | 50.0% | |
!! | ACAGGCTTTGGGTTTGAAGC+TGG | - | chr2_4:13515733-13515752 | Msa0316410:intron | 50.0% |
! | CTTTGGGTTTGAAGCTGGTG+AGG | - | chr2_4:13515738-13515757 | Msa0316410:intron | 50.0% |
GGAAGATTACCAGGCAACCA+GGG | - | chr2_4:13516174-13516193 | Msa0316410:intron | 50.0% | |
GTTGAGTAAGGCTGCGACTT+AGG | - | chr2_4:13516298-13516317 | Msa0316410:intron | 50.0% | |
TGAGTAAGGCTGCGACTTAG+GGG | - | chr2_4:13516300-13516319 | Msa0316410:intron | 50.0% | |
!! | TCCCTGGCCTTACCAAATCA+CGG | - | chr2_4:13516438-13516457 | Msa0316410:intron | 50.0% |
!! | TGGTGTTTGGTGGTGGACAA+CGG | + | chr2_4:13516676-13516695 | None:intergenic | 50.0% |
! | GGTTGTATGGTGTTTGGTGG+TGG | + | chr2_4:13516683-13516702 | None:intergenic | 50.0% |
GTCCATGTCAGTGTCGTGTT+CGG | + | chr2_4:13516862-13516881 | None:intergenic | 50.0% | |
! | TTCTGATTGAAGGCGTGTCC+CGG | + | chr2_4:13516936-13516955 | None:intergenic | 50.0% |
ATTGGCCCAGGTCCACATTA+GGG | + | chr2_4:13517199-13517218 | None:intergenic | 50.0% | |
TGGGGGAAAGAAGGTGAAAG+TGG | - | chr2_4:13517368-13517387 | Msa0316410:intron | 50.0% | |
GGGGGAAAGAAGGTGAAAGT+GGG | - | chr2_4:13517369-13517388 | Msa0316410:intron | 50.0% | |
CGAATAGAAGGAGGTGGATG+GGG | - | chr2_4:13517405-13517424 | Msa0316410:intron | 50.0% | |
AACTGGAGCTTCGTGGTTAC+CGG | + | chr2_4:13517567-13517586 | None:intergenic | 50.0% | |
TTGGCCGAAATTGTGCTTGG+AGG | - | chr2_4:13517587-13517606 | Msa0316410:CDS | 50.0% | |
GAAATTGTGCTTGGAGGCAG+TGG | - | chr2_4:13517593-13517612 | Msa0316410:CDS | 50.0% | |
CTTGGAGGCAGTGGAAAAGT+CGG | - | chr2_4:13517602-13517621 | Msa0316410:CDS | 50.0% | |
GGATGAAGTGGCAGCATCTT+TGG | - | chr2_4:13517623-13517642 | Msa0316410:CDS | 50.0% | |
AAGTGGCAGCATCTTTGGGT+TGG | - | chr2_4:13517628-13517647 | Msa0316410:CDS | 50.0% | |
CACCCATTTCATGCTCAGCA+AGG | + | chr2_4:13517681-13517700 | None:intergenic | 50.0% | |
CTTGCTGAGCATGAAATGGG+TGG | - | chr2_4:13517679-13517698 | Msa0316410:CDS | 50.0% | |
GCATGAAATGGGTGGGAGAT+AGG | - | chr2_4:13517687-13517706 | Msa0316410:CDS | 50.0% | |
GTGGGAGATAGGTAAGCTTG+TGG | - | chr2_4:13517698-13517717 | Msa0316410:CDS | 50.0% | |
TGGTCGAAGGAGGTGGAAAA+AGG | - | chr2_4:13517718-13517737 | Msa0316410:CDS | 50.0% | |
CGAAGGAGGTGGAAAAAGGA+AGG | - | chr2_4:13517722-13517741 | Msa0316410:CDS | 50.0% | |
AGGAGGTGGAAAAAGGAAGG+GGG | - | chr2_4:13517725-13517744 | Msa0316410:CDS | 50.0% | |
GGAGACAGAAATGAAGCTGG+AGG | - | chr2_4:13517768-13517787 | Msa0316410:intron | 50.0% | |
!! | TGATGGAGAGATTGGCCTGA+TGG | - | chr2_4:13517811-13517830 | Msa0316410:intron | 50.0% |
AAAATCAGCCCTTCTCTGCC+GGG | - | chr2_4:13517966-13517985 | Msa0316410:intron | 50.0% | |
GCTTAGTCTGCCAGTTGACT+AGG | - | chr2_4:13518045-13518064 | Msa0316410:intron | 50.0% | |
TAGTCATGGGGCAATACTGG+GGG | - | chr2_4:13518108-13518127 | Msa0316410:CDS | 50.0% | |
AATCAAGTCCGGGTTAACCC+GGG | + | chr2_4:13518522-13518541 | None:intergenic | 50.0% | |
CAATCAAGTCCGGGTTAACC+CGG | + | chr2_4:13518523-13518542 | None:intergenic | 50.0% | |
AACGTTTGGCTATGTGGGCA+CGG | - | chr2_4:13519022-13519041 | Msa0316410:intron | 50.0% | |
ACTGCATCGGGACGGAGTTA+CGG | + | chr2_4:13512347-13512366 | None:intergenic | 55.0% | |
CTCTAGTACTCCATCCGTCC+CGG | - | chr2_4:13512405-13512424 | Msa0316410:three_prime_UTR | 55.0% | |
TGTTGAAGACGTCCGGGCTA+AGG | - | chr2_4:13514067-13514086 | Msa0316410:intron | 55.0% | |
GTTGAAGACGTCCGGGCTAA+GGG | - | chr2_4:13514068-13514087 | Msa0316410:intron | 55.0% | |
GGAAAAGTCACTAGGGAGCC+TGG | - | chr2_4:13514092-13514111 | Msa0316410:intron | 55.0% | |
ACACTTGTCCCGCCACTAAC+TGG | + | chr2_4:13514119-13514138 | None:intergenic | 55.0% | |
GCCTTTGTGGCAGATCCTGA+TGG | - | chr2_4:13514143-13514162 | Msa0316410:intron | 55.0% | |
GCTCAGGGGTAGAAGCTCTT+TGG | + | chr2_4:13514187-13514206 | None:intergenic | 55.0% | |
!! | TTGATGGGCTAATGCGCCAG+GGG | + | chr2_4:13515462-13515481 | None:intergenic | 55.0% |
!! | CTTGATGGGCTAATGCGCCA+GGG | + | chr2_4:13515463-13515482 | None:intergenic | 55.0% |
! | GGGTTTGAAGCTGGTGAGGA+CGG | - | chr2_4:13515742-13515761 | Msa0316410:intron | 55.0% |
AGCTATGCTTGGGTACGCAG+AGG | - | chr2_4:13515907-13515926 | Msa0316410:CDS | 55.0% | |
GGAGCACGAGACCATTGTGT+TGG | - | chr2_4:13515928-13515947 | Msa0316410:intron | 55.0% | |
GGGAAGATTACCAGGCAACC+AGG | - | chr2_4:13516173-13516192 | Msa0316410:intron | 55.0% | |
!! | CCCGTGATTTGGTAAGGCCA+GGG | + | chr2_4:13516442-13516461 | None:intergenic | 55.0% |
!! | CCCTGGCCTTACCAAATCAC+GGG | - | chr2_4:13516439-13516458 | Msa0316410:intron | 55.0% |
!! | TCCCGTGATTTGGTAAGGCC+AGG | + | chr2_4:13516443-13516462 | None:intergenic | 55.0% |
!! | GGTGTTTGGTGGTGGACAAC+GGG | + | chr2_4:13516675-13516694 | None:intergenic | 55.0% |
CACCGAACACGACACTGACA+TGG | - | chr2_4:13516857-13516876 | Msa0316410:intron | 55.0% | |
AATCAAGGCCCCCCCTAATG+TGG | - | chr2_4:13517184-13517203 | Msa0316410:intron | 55.0% | |
TTGGCCCAGGTCCACATTAG+GGG | + | chr2_4:13517198-13517217 | None:intergenic | 55.0% | |
! | GATTGGCCCAGGTCCACATT+AGG | + | chr2_4:13517200-13517219 | None:intergenic | 55.0% |
ATGTGGACCTGGGCCAATCA+TGG | - | chr2_4:13517201-13517220 | Msa0316410:intron | 55.0% | |
GGCTTGCAGTGTGGTTCATC+TGG | - | chr2_4:13517250-13517269 | Msa0316410:intron | 55.0% | |
GCAGTCGGTGCAAGATGCTA+TGG | - | chr2_4:13517439-13517458 | Msa0316410:intron | 55.0% | |
GCTTAAATGGAAGGTGGCCC+TGG | - | chr2_4:13517537-13517556 | Msa0316410:intron | 55.0% | |
!! | CAGCATCTTTGGGTTGGCAG+AGG | - | chr2_4:13517634-13517653 | Msa0316410:CDS | 55.0% |
GGTAAGCTTGTGGTCGAAGG+AGG | - | chr2_4:13517708-13517727 | Msa0316410:CDS | 55.0% | |
AAGCTTGTGGTCGAAGGAGG+TGG | - | chr2_4:13517711-13517730 | Msa0316410:CDS | 55.0% | |
GGAGGTGGAAAAAGGAAGGG+GGG | - | chr2_4:13517726-13517745 | Msa0316410:CDS | 55.0% | |
GGAAGACATGGGCAGTACTG+TGG | - | chr2_4:13517889-13517908 | Msa0316410:CDS | 55.0% | |
AGACATGGGCAGTACTGTGG+TGG | - | chr2_4:13517892-13517911 | Msa0316410:CDS | 55.0% | |
GACATGGGCAGTACTGTGGT+GGG | - | chr2_4:13517893-13517912 | Msa0316410:CDS | 55.0% | |
ACAACCATCCCGGCAGAGAA+GGG | + | chr2_4:13517977-13517996 | None:intergenic | 55.0% | |
TACAACCATCCCGGCAGAGA+AGG | + | chr2_4:13517978-13517997 | None:intergenic | 55.0% | |
TTCTCTGCCGGGATGGTTGT+AGG | - | chr2_4:13517977-13517996 | Msa0316410:intron | 55.0% | |
TGCGGACAAGTGGACAACAC+AGG | + | chr2_4:13518498-13518517 | None:intergenic | 55.0% | |
TTGTCCACTTGTCCGCAACC+CGG | - | chr2_4:13518501-13518520 | Msa0316410:intron | 55.0% | |
GGAACTGGAGTGAAGTGTGC+TGG | - | chr2_4:13519186-13519205 | Msa0316410:intron | 55.0% | |
! | CGGGACGGAGTTACGGGTTA+TGG | + | chr2_4:13512340-13512359 | None:intergenic | 60.0% |
CTGCATCGGGACGGAGTTAC+GGG | + | chr2_4:13512346-13512365 | None:intergenic | 60.0% | |
AGGGAGCCTGGTCCAGTTAG+TGG | - | chr2_4:13514104-13514123 | Msa0316410:intron | 60.0% | |
GAGCCTGGTCCAGTTAGTGG+CGG | - | chr2_4:13514107-13514126 | Msa0316410:intron | 60.0% | |
AGCCTGGTCCAGTTAGTGGC+GGG | - | chr2_4:13514108-13514127 | Msa0316410:intron | 60.0% | |
!! | GCTTGATGGGCTAATGCGCC+AGG | + | chr2_4:13515464-13515483 | None:intergenic | 60.0% |
AGGAATTGGCCCTGGTTGCC+TGG | + | chr2_4:13516186-13516205 | None:intergenic | 60.0% | |
AGGCAACCAGGGCCAATTCC+TGG | - | chr2_4:13516185-13516204 | Msa0316410:intron | 60.0% | |
TTGAGGCCAGGAATTGGCCC+TGG | + | chr2_4:13516194-13516213 | None:intergenic | 60.0% | |
!! | CAAGTGTCGGTGTCGGACAC+CGG | - | chr2_4:13516914-13516933 | Msa0316410:intron | 60.0% |
!! | AAGTGTCGGTGTCGGACACC+GGG | - | chr2_4:13516915-13516934 | Msa0316410:intron | 60.0% |
TGGCCCAGGTCCACATTAGG+GGG | + | chr2_4:13517197-13517216 | None:intergenic | 60.0% | |
! | GTGAGGTCCATGATTGGCCC+AGG | + | chr2_4:13517211-13517230 | None:intergenic | 60.0% |
GGCAACATGGGCTTGCAGTG+TGG | - | chr2_4:13517241-13517260 | Msa0316410:intron | 60.0% | |
CGGCCAAAACTGGAGCTTCG+TGG | + | chr2_4:13517574-13517593 | None:intergenic | 60.0% | |
TGTCCACTTGTCCGCAACCC+GGG | - | chr2_4:13518502-13518521 | Msa0316410:intron | 60.0% | |
TAACCCGGGTTGCGGACAAG+TGG | + | chr2_4:13518508-13518527 | None:intergenic | 60.0% | |
GAAGACGTCCGGGCTAAGGG+TGG | - | chr2_4:13514071-13514090 | Msa0316410:intron | 65.0% | |
GTCCCGCCACTAACTGGACC+AGG | + | chr2_4:13514113-13514132 | None:intergenic | 65.0% | |
GCCCCCCCTAATGTGGACCT+GGG | - | chr2_4:13517191-13517210 | Msa0316410:intron | 65.0% | |
GCCCAGGTCCACATTAGGGG+GGG | + | chr2_4:13517195-13517214 | None:intergenic | 65.0% | |
GGCCCAGGTCCACATTAGGG+GGG | + | chr2_4:13517196-13517215 | None:intergenic | 65.0% | |
! | GGTGGATGGGGCACTAGCAG+AGG | - | chr2_4:13517417-13517436 | Msa0316410:intron | 65.0% |
! | GGGGCACTAGCAGAGGCAGT+CGG | - | chr2_4:13517424-13517443 | Msa0316410:intron | 65.0% |
TCGTGGTTACCGGCGCTCCA+GGG | + | chr2_4:13517557-13517576 | None:intergenic | 65.0% | |
TTCGTGGTTACCGGCGCTCC+AGG | + | chr2_4:13517558-13517577 | None:intergenic | 65.0% | |
!! | TGGGCAGTACTGTGGTGGGC+AGG | - | chr2_4:13517897-13517916 | Msa0316410:CDS | 65.0% |
TCAGCCCTTCTCTGCCGGGA+TGG | - | chr2_4:13517970-13517989 | Msa0316410:intron | 65.0% | |
GTCCGCAACCCGGGTTAACC+CGG | - | chr2_4:13518511-13518530 | Msa0316410:intron | 65.0% | |
GTCCGGGTTAACCCGGGTTG+CGG | + | chr2_4:13518516-13518535 | None:intergenic | 65.0% | |
GGCCCCCCCTAATGTGGACC+TGG | - | chr2_4:13517190-13517209 | Msa0316410:intron | 70.0% | |
GGAAGGTGGCCCTGGAGCGC+CGG | - | chr2_4:13517545-13517564 | Msa0316410:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 13512336 | 13519506 | 13512336 | ID=Msa0316410;Name=Msa0316410 |
chr2_4 | mRNA | 13512336 | 13519506 | 13512336 | ID=Msa0316410-mRNA-1;Parent=Msa0316410;Name=Msa0316410-mRNA-1;_AED=0.10;_eAED=0.10;_QI=185|1|1|1|0.77|0.7|10|308|287 |
chr2_4 | exon | 13512336 | 13512685 | 13512336 | ID=Msa0316410-mRNA-1:exon:5112;Parent=Msa0316410-mRNA-1 |
chr2_4 | exon | 13515586 | 13515738 | 13515586 | ID=Msa0316410-mRNA-1:exon:5111;Parent=Msa0316410-mRNA-1 |
chr2_4 | exon | 13515836 | 13515943 | 13515836 | ID=Msa0316410-mRNA-1:exon:5110;Parent=Msa0316410-mRNA-1 |
chr2_4 | exon | 13516058 | 13516105 | 13516058 | ID=Msa0316410-mRNA-1:exon:5109;Parent=Msa0316410-mRNA-1 |
chr2_4 | exon | 13517574 | 13517786 | 13517574 | ID=Msa0316410-mRNA-1:exon:5108;Parent=Msa0316410-mRNA-1 |
chr2_4 | exon | 13517875 | 13517939 | 13517875 | ID=Msa0316410-mRNA-1:exon:5107;Parent=Msa0316410-mRNA-1 |
chr2_4 | exon | 13518086 | 13518210 | 13518086 | ID=Msa0316410-mRNA-1:exon:5106;Parent=Msa0316410-mRNA-1 |
chr2_4 | exon | 13518298 | 13518429 | 13518298 | ID=Msa0316410-mRNA-1:exon:5105;Parent=Msa0316410-mRNA-1 |
chr2_4 | exon | 13519092 | 13519188 | 13519092 | ID=Msa0316410-mRNA-1:exon:5104;Parent=Msa0316410-mRNA-1 |
chr2_4 | exon | 13519441 | 13519506 | 13519441 | ID=Msa0316410-mRNA-1:exon:5103;Parent=Msa0316410-mRNA-1 |
chr2_4 | five_prime_UTR | 13519441 | 13519506 | 13519441 | ID=Msa0316410-mRNA-1:five_prime_utr;Parent=Msa0316410-mRNA-1 |
chr2_4 | five_prime_UTR | 13519092 | 13519188 | 13519092 | ID=Msa0316410-mRNA-1:five_prime_utr;Parent=Msa0316410-mRNA-1 |
chr2_4 | five_prime_UTR | 13518408 | 13518429 | 13518408 | ID=Msa0316410-mRNA-1:five_prime_utr;Parent=Msa0316410-mRNA-1 |
chr2_4 | CDS | 13518298 | 13518407 | 13518298 | ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1 |
chr2_4 | CDS | 13518086 | 13518210 | 13518086 | ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1 |
chr2_4 | CDS | 13517875 | 13517939 | 13517875 | ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1 |
chr2_4 | CDS | 13517574 | 13517786 | 13517574 | ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1 |
chr2_4 | CDS | 13516058 | 13516105 | 13516058 | ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1 |
chr2_4 | CDS | 13515836 | 13515943 | 13515836 | ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1 |
chr2_4 | CDS | 13515586 | 13515738 | 13515586 | ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1 |
chr2_4 | CDS | 13512644 | 13512685 | 13512644 | ID=Msa0316410-mRNA-1:cds;Parent=Msa0316410-mRNA-1 |
chr2_4 | three_prime_UTR | 13512336 | 13512643 | 13512336 | ID=Msa0316410-mRNA-1:three_prime_utr;Parent=Msa0316410-mRNA-1 |
Gene Sequence |
Protein sequence |