Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683730 | XP_003607149.1 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683730 | sp|Q6K508|GLUD1_ORYSJ | 26.330 | 376 | 201 | 9 | 48 | 350 | 85 | 457 | 2.34e-37 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683730 | G7JMA3 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0683730 | 0.828875 | 7.048814e-55 | -8.615850e-47 |
| Msa0003700 | Msa0683730 | 0.824147 | 9.448024e-54 | -8.615850e-47 |
| Msa0007480 | Msa0683730 | 0.808531 | 2.958630e-50 | -8.615850e-47 |
| Msa0014710 | Msa0683730 | 0.802409 | 5.687322e-49 | -8.615850e-47 |
| Msa0015390 | Msa0683730 | 0.858514 | 7.819973e-63 | -8.615850e-47 |
| Msa0017510 | Msa0683730 | 0.837764 | 4.288035e-57 | -8.615850e-47 |
| Msa0026130 | Msa0683730 | 0.808172 | 3.528297e-50 | -8.615850e-47 |
| Msa0026430 | Msa0683730 | 0.804466 | 2.130986e-49 | -8.615850e-47 |
| Msa0027230 | Msa0683730 | 0.804945 | 1.692625e-49 | -8.615850e-47 |
| Msa0028420 | Msa0683730 | 0.805491 | 1.301325e-49 | -8.615850e-47 |
| Msa0030180 | Msa0683730 | 0.808961 | 2.394919e-50 | -8.615850e-47 |
| Msa0035150 | Msa0683730 | 0.816512 | 5.321641e-52 | -8.615850e-47 |
| Msa0043560 | Msa0683730 | 0.801590 | 8.379909e-49 | -8.615850e-47 |
| Msa0044000 | Msa0683730 | 0.807987 | 3.864875e-50 | -8.615850e-47 |
| Msa0046100 | Msa0683730 | 0.812248 | 4.665174e-51 | -8.615850e-47 |
| Msa0047070 | Msa0683730 | 0.805184 | 1.509103e-49 | -8.615850e-47 |
| Msa0047980 | Msa0683730 | 0.807452 | 5.020885e-50 | -8.615850e-47 |
| Msa0051020 | Msa0683730 | 0.803636 | 3.171237e-49 | -8.615850e-47 |
| Msa0052680 | Msa0683730 | 0.804646 | 1.954724e-49 | -8.615850e-47 |
| Msa0052730 | Msa0683730 | 0.811226 | 7.784310e-51 | -8.615850e-47 |
| Msa0053780 | Msa0683730 | 0.814052 | 1.874860e-51 | -8.615850e-47 |
| Msa0058490 | Msa0683730 | 0.821731 | 3.453930e-53 | -8.615850e-47 |
| Msa0058510 | Msa0683730 | 0.822831 | 1.919631e-53 | -8.615850e-47 |
| Msa0061340 | Msa0683730 | 0.827296 | 1.692270e-54 | -8.615850e-47 |
| Msa0069330 | Msa0683730 | 0.846902 | 1.622171e-59 | -8.615850e-47 |
| Msa0089360 | Msa0683730 | 0.811462 | 6.918030e-51 | -8.615850e-47 |
| Msa0090360 | Msa0683730 | 0.812027 | 5.211201e-51 | -8.615850e-47 |
| Msa0091600 | Msa0683730 | 0.837666 | 4.543730e-57 | -8.615850e-47 |
| Msa0095560 | Msa0683730 | 0.802426 | 5.640864e-49 | -8.615850e-47 |
| Msa0096450 | Msa0683730 | 0.809889 | 1.514055e-50 | -8.615850e-47 |
| Msa0097840 | Msa0683730 | 0.808632 | 2.815626e-50 | -8.615850e-47 |
| Msa0101270 | Msa0683730 | 0.800983 | 1.115917e-48 | -8.615850e-47 |
| Msa0104550 | Msa0683730 | 0.848034 | 7.925842e-60 | -8.615850e-47 |
| Msa0110970 | Msa0683730 | 0.820489 | 6.676007e-53 | -8.615850e-47 |
| Msa0602870 | Msa0683730 | 0.914834 | 1.202718e-84 | -8.615850e-47 |
| Msa0610430 | Msa0683730 | 0.805524 | 1.280646e-49 | -8.615850e-47 |
| Msa0615710 | Msa0683730 | 0.817502 | 3.189637e-52 | -8.615850e-47 |
| Msa0626090 | Msa0683730 | 0.801282 | 9.692964e-49 | -8.615850e-47 |
| Msa0627450 | Msa0683730 | 0.801725 | 7.862880e-49 | -8.615850e-47 |
| Msa0635380 | Msa0683730 | 0.815328 | 9.778530e-52 | -8.615850e-47 |
| Msa0642720 | Msa0683730 | 0.810930 | 9.024000e-51 | -8.615850e-47 |
| Msa0643890 | Msa0683730 | 0.944707 | 1.187318e-103 | -8.615850e-47 |
| Msa0657750 | Msa0683730 | 0.813226 | 2.848840e-51 | -8.615850e-47 |
| Msa0657970 | Msa0683730 | 0.821453 | 4.005607e-53 | -8.615850e-47 |
| Msa0663390 | Msa0683730 | 0.806010 | 1.012514e-49 | -8.615850e-47 |
| Msa0663920 | Msa0683730 | 0.807719 | 4.406527e-50 | -8.615850e-47 |
| Msa0667050 | Msa0683730 | 0.809123 | 2.210561e-50 | -8.615850e-47 |
| Msa0669320 | Msa0683730 | 0.803381 | 3.582740e-49 | -8.615850e-47 |
| Msa0674580 | Msa0683730 | 0.800207 | 1.606152e-48 | -8.615850e-47 |
| Msa0677410 | Msa0683730 | 0.804015 | 2.646198e-49 | -8.615850e-47 |
| Msa0682680 | Msa0683730 | 0.801811 | 7.551197e-49 | -8.615850e-47 |
| Msa0683730 | Msa0685920 | 0.808131 | 3.600816e-50 | -8.615850e-47 |
| Msa0683730 | Msa0687020 | 0.811269 | 7.618467e-51 | -8.615850e-47 |
| Msa0683730 | Msa0693380 | 0.809410 | 1.918246e-50 | -8.615850e-47 |
| Msa0683730 | Msa0702440 | 0.801178 | 1.017853e-48 | -8.615850e-47 |
| Msa0683730 | Msa0702470 | 0.806544 | 7.813486e-50 | -8.615850e-47 |
| Msa0683730 | Msa0703050 | 0.820472 | 6.737028e-53 | -8.615850e-47 |
| Msa0683730 | Msa0712270 | 0.801122 | 1.045160e-48 | -8.615850e-47 |
| Msa0683730 | Msa0720690 | 0.816745 | 4.719404e-52 | -8.615850e-47 |
| Msa0683730 | Msa0721280 | 0.807271 | 5.485117e-50 | -8.615850e-47 |
| Msa0683730 | Msa0729510 | 0.803199 | 3.907684e-49 | -8.615850e-47 |
| Msa0683730 | Msa0729720 | 0.863414 | 2.532475e-64 | -8.615850e-47 |
| Msa0683730 | Msa0731270 | 0.830736 | 2.482545e-55 | -8.615850e-47 |
| Msa0683730 | Msa0740510 | 0.814088 | 1.840985e-51 | -8.615850e-47 |
| Msa0683730 | Msa0740640 | 0.835681 | 1.456186e-56 | -8.615850e-47 |
| Msa0683730 | Msa0743720 | 0.808838 | 2.543695e-50 | -8.615850e-47 |
| Msa0683730 | Msa0770080 | 0.855348 | 6.703054e-62 | -8.615850e-47 |
| Msa0683730 | Msa0771280 | 0.830960 | 2.187704e-55 | -8.615850e-47 |
| Msa0683730 | Msa0772410 | 0.816253 | 6.083016e-52 | -8.615850e-47 |
| Msa0683730 | Msa0785210 | 0.812734 | 3.652178e-51 | -8.615850e-47 |
| Msa0683730 | Msa0798430 | 0.821946 | 3.081482e-53 | -8.615850e-47 |
| Msa0683730 | Msa0803890 | 0.804281 | 2.329160e-49 | -8.615850e-47 |
| Msa0683730 | Msa0806800 | 0.817539 | 3.129761e-52 | -8.615850e-47 |
| Msa0683730 | Msa0820770 | 0.817174 | 3.781955e-52 | -8.615850e-47 |
| Msa0683730 | Msa0822870 | 0.801528 | 8.630154e-49 | -8.615850e-47 |
| Msa0683730 | Msa0824680 | 0.820628 | 6.203551e-53 | -8.615850e-47 |
| Msa0683730 | Msa0828560 | 0.828261 | 9.918544e-55 | -8.615850e-47 |
| Msa0683730 | Msa0828920 | 0.803204 | 3.898330e-49 | -8.615850e-47 |
| Msa0683730 | Msa0832340 | 0.813703 | 2.237914e-51 | -8.615850e-47 |
| Msa0683730 | Msa0834770 | 0.826288 | 2.945548e-54 | -8.615850e-47 |
| Msa0683730 | Msa0838580 | 0.830386 | 3.024736e-55 | -8.615850e-47 |
| Msa0683730 | Msa0843220 | 0.800249 | 1.574871e-48 | -8.615850e-47 |
| Msa0683730 | Msa0844570 | 0.816292 | 5.962184e-52 | -8.615850e-47 |
| Msa0683730 | Msa0849100 | 0.834020 | 3.815400e-56 | -8.615850e-47 |
| Msa0683730 | Msa0857640 | 0.800587 | 1.343582e-48 | -8.615850e-47 |
| Msa0683730 | Msa0861090 | 0.814658 | 1.376995e-51 | -8.615850e-47 |
| Msa0683730 | Msa0861540 | 0.802539 | 5.348635e-49 | -8.615850e-47 |
| Msa0683730 | Msa0861870 | 0.807896 | 4.039802e-50 | -8.615850e-47 |
| Msa0683730 | Msa0876190 | 0.848580 | 5.599214e-60 | -8.615850e-47 |
| Msa0683730 | Msa0878290 | 0.816783 | 4.628495e-52 | -8.615850e-47 |
| Msa0683730 | Msa0880140 | 0.835805 | 1.354681e-56 | -8.615850e-47 |
| Msa0683730 | Msa0881460 | 0.805472 | 1.313250e-49 | -8.615850e-47 |
| Msa0683730 | Msa0896970 | 0.801809 | 7.557620e-49 | -8.615850e-47 |
| Msa0683730 | Msa0908050 | 0.801370 | 9.297139e-49 | -8.615850e-47 |
| Msa0683730 | Msa0909140 | 0.805703 | 1.174522e-49 | -8.615850e-47 |
| Msa0683730 | Msa0924470 | 0.819968 | 8.786891e-53 | -8.615850e-47 |
| Msa0683730 | Msa0930780 | 0.820477 | 6.719118e-53 | -8.615850e-47 |
| Msa0683730 | Msa0938480 | 0.828579 | 8.311713e-55 | -8.615850e-47 |
| Msa0683730 | Msa0944030 | 0.813649 | 2.299955e-51 | -8.615850e-47 |
| Msa0683730 | Msa0945110 | 0.801541 | 8.576497e-49 | -8.615850e-47 |
| Msa0683730 | Msa0947660 | 0.808842 | 2.538729e-50 | -8.615850e-47 |
| Msa0683730 | Msa0954130 | 0.801032 | 1.090239e-48 | -8.615850e-47 |
| Msa0683730 | Msa0958360 | 0.800611 | 1.328822e-48 | -8.615850e-47 |
| Msa0683730 | Msa0963270 | 0.801920 | 7.169842e-49 | -8.615850e-47 |
| Msa0683730 | Msa0967380 | 0.801228 | 9.941062e-49 | -8.615850e-47 |
| Msa0683730 | Msa0967870 | 0.800916 | 1.151652e-48 | -8.615850e-47 |
| Msa0683730 | Msa0969200 | 0.801547 | 8.552431e-49 | -8.615850e-47 |
| Msa0683730 | Msa0969450 | 0.801455 | 8.932445e-49 | -8.615850e-47 |
| Msa0683730 | Msa0969520 | 0.840894 | 6.604540e-58 | -8.615850e-47 |
| Msa0683730 | Msa0974060 | 0.816404 | 5.628802e-52 | -8.615850e-47 |
| Msa0683730 | Msa0992020 | 0.813990 | 1.934970e-51 | -8.615850e-47 |
| Msa0683730 | Msa0993730 | 0.816352 | 5.781573e-52 | -8.615850e-47 |
| Msa0683730 | Msa0993750 | 0.807502 | 4.899959e-50 | -8.615850e-47 |
| Msa0683730 | Msa0997970 | 0.844928 | 5.578858e-59 | -8.615850e-47 |
| Msa0683730 | Msa1004010 | 0.805049 | 1.610555e-49 | -8.615850e-47 |
| Msa0683730 | Msa1005870 | 0.809764 | 1.610178e-50 | -8.615850e-47 |
| Msa0683730 | Msa1010350 | 0.827034 | 1.954429e-54 | -8.615850e-47 |
| Msa0683730 | Msa1013770 | 0.801595 | 8.359004e-49 | -8.615850e-47 |
| Msa0683730 | Msa1019000 | 0.842781 | 2.097047e-58 | -8.615850e-47 |
| Msa0683730 | Msa1019430 | 0.801688 | 8.002354e-49 | -8.615850e-47 |
| Msa0683730 | Msa1029250 | 0.817017 | 4.099989e-52 | -8.615850e-47 |
| Msa0683730 | Msa1030970 | 0.812289 | 4.569669e-51 | -8.615850e-47 |
| Msa0683730 | Msa1031860 | 0.803339 | 3.653847e-49 | -8.615850e-47 |
| Msa0683730 | Msa1041670 | 0.809420 | 1.908851e-50 | -8.615850e-47 |
| Msa0683730 | Msa1046280 | 0.804063 | 2.586244e-49 | -8.615850e-47 |
| Msa0683730 | Msa1050910 | 0.816802 | 4.583263e-52 | -8.615850e-47 |
| Msa0683730 | Msa1059960 | 0.816768 | 4.664475e-52 | -8.615850e-47 |
| Msa0683730 | Msa1065610 | 0.804680 | 1.923465e-49 | -8.615850e-47 |
| Msa0683730 | Msa1075220 | -0.821279 | 4.392803e-53 | -8.615850e-47 |
| Msa0683730 | Msa1075540 | 0.809383 | 1.944053e-50 | -8.615850e-47 |
| Msa0683730 | Msa1078170 | 0.820820 | 5.605292e-53 | -8.615850e-47 |
| Msa0683730 | Msa1079590 | 0.801646 | 8.163325e-49 | -8.615850e-47 |
| Msa0683730 | Msa1081330 | 0.813214 | 2.867034e-51 | -8.615850e-47 |
| Msa0683730 | Msa1082500 | 0.834155 | 3.530368e-56 | -8.615850e-47 |
| Msa0683730 | Msa1085200 | 0.828660 | 7.947152e-55 | -8.615850e-47 |
| Msa0683730 | Msa1087480 | 0.814968 | 1.175981e-51 | -8.615850e-47 |
| Msa0683730 | Msa1092010 | 0.806609 | 7.569464e-50 | -8.615850e-47 |
| Msa0683730 | Msa1093840 | 0.832208 | 1.077981e-55 | -8.615850e-47 |
| Msa0683730 | Msa1098120 | 0.821781 | 3.364737e-53 | -8.615850e-47 |
| Msa0683730 | Msa1099910 | 0.821911 | 3.138067e-53 | -8.615850e-47 |
| Msa0683730 | Msa1100050 | 0.823602 | 1.268194e-53 | -8.615850e-47 |
| Msa0683730 | Msa1105160 | 0.807777 | 4.283367e-50 | -8.615850e-47 |
| Msa0683730 | Msa1106700 | 0.824514 | 7.747717e-54 | -8.615850e-47 |
| Msa0683730 | Msa1108160 | 0.806701 | 7.238738e-50 | -8.615850e-47 |
| Msa0683730 | Msa1111130 | 0.810670 | 1.027001e-50 | -8.615850e-47 |
| Msa0683730 | Msa1111180 | 0.801245 | 9.861253e-49 | -8.615850e-47 |
| Msa0683730 | Msa1116130 | -0.806476 | 8.076904e-50 | -8.615850e-47 |
| Msa0683730 | Msa1124110 | 0.804090 | 2.552151e-49 | -8.615850e-47 |
| Msa0683730 | Msa1129550 | 0.818515 | 1.883152e-52 | -8.615850e-47 |
| Msa0683730 | Msa1129730 | 0.821241 | 4.481826e-53 | -8.615850e-47 |
| Msa0683730 | Msa1131220 | 0.801482 | 8.820939e-49 | -8.615850e-47 |
| Msa0683730 | Msa1134110 | 0.813115 | 3.012942e-51 | -8.615850e-47 |
| Msa0683730 | Msa1135470 | 0.806809 | 6.867203e-50 | -8.615850e-47 |
| Msa0683730 | Msa1137570 | 0.830346 | 3.092376e-55 | -8.615850e-47 |
| Msa0683730 | Msa1147740 | 0.805636 | 1.213384e-49 | -8.615850e-47 |
| Msa0683730 | Msa1151910 | 0.819163 | 1.341344e-52 | -8.615850e-47 |
| Msa0683730 | Msa1154710 | 0.808933 | 2.427939e-50 | -8.615850e-47 |
| Msa0683730 | Msa1157870 | 0.816978 | 4.185640e-52 | -8.615850e-47 |
| Msa0683730 | Msa1162550 | -0.810491 | 1.122801e-50 | -8.615850e-47 |
| Msa0683730 | Msa1166560 | 0.806206 | 9.205528e-50 | -8.615850e-47 |
| Msa0683730 | Msa1168160 | 0.801016 | 1.098432e-48 | -8.615850e-47 |
| Msa0683730 | Msa1172670 | 0.806862 | 6.692467e-50 | -8.615850e-47 |
| Msa0683730 | Msa1173100 | 0.808742 | 2.667125e-50 | -8.615850e-47 |
| Msa0683730 | Msa1174040 | 0.816949 | 4.247191e-52 | -8.615850e-47 |
| Msa0683730 | Msa1179940 | 0.807783 | 4.270187e-50 | -8.615850e-47 |
| Msa0683730 | Msa1179970 | 0.806057 | 9.893097e-50 | -8.615850e-47 |
| Msa0683730 | Msa1188710 | 0.825564 | 4.376288e-54 | -8.615850e-47 |
| Msa0683730 | Msa1189070 | 0.836695 | 8.049952e-57 | -8.615850e-47 |
| Msa0683730 | Msa1190920 | 0.804667 | 1.935143e-49 | -8.615850e-47 |
| Msa0683730 | Msa1190930 | 0.806486 | 8.036485e-50 | -8.615850e-47 |
| Msa0683730 | Msa1193290 | 0.824503 | 7.793132e-54 | -8.615850e-47 |
| Msa0683730 | Msa1196440 | 0.803828 | 2.893611e-49 | -8.615850e-47 |
| Msa0683730 | Msa1199570 | 0.802045 | 6.759073e-49 | -8.615850e-47 |
| Msa0683730 | Msa1203710 | 0.806258 | 8.977856e-50 | -8.615850e-47 |
| Msa0683730 | Msa1204530 | 0.803420 | 3.515746e-49 | -8.615850e-47 |
| Msa0683730 | Msa1204630 | 0.808670 | 2.763779e-50 | -8.615850e-47 |
| Msa0683730 | Msa1212940 | 0.816919 | 4.314083e-52 | -8.615850e-47 |
| Msa0683730 | Msa1221050 | 0.801010 | 1.101773e-48 | -8.615850e-47 |
| Msa0683730 | Msa1221060 | 0.818256 | 2.155720e-52 | -8.615850e-47 |
| Msa0683730 | Msa1229500 | 0.805431 | 1.339703e-49 | -8.615850e-47 |
| Msa0683730 | Msa1232740 | 0.806443 | 8.206093e-50 | -8.615850e-47 |
| Msa0683730 | Msa1236100 | 0.808018 | 3.805001e-50 | -8.615850e-47 |
| Msa0683730 | Msa1242220 | 0.801051 | 1.080312e-48 | -8.615850e-47 |
| Msa0683730 | Msa1244610 | 0.803314 | 3.697714e-49 | -8.615850e-47 |
| Msa0683730 | Msa1250530 | 0.842307 | 2.800760e-58 | -8.615850e-47 |
| Msa0683730 | Msa1251160 | 0.802915 | 4.472380e-49 | -8.615850e-47 |
| Msa0683730 | Msa1253020 | 0.804920 | 1.713742e-49 | -8.615850e-47 |
| Msa0683730 | Msa1255190 | 0.821078 | 4.888646e-53 | -8.615850e-47 |
| Msa0683730 | Msa1271990 | 0.810855 | 9.367022e-51 | -8.615850e-47 |
| Msa0683730 | Msa1276660 | 0.816678 | 4.884881e-52 | -8.615850e-47 |
| Msa0683730 | Msa1283840 | 0.808164 | 3.543479e-50 | -8.615850e-47 |
| Msa0683730 | Msa1283860 | 0.814391 | 1.577606e-51 | -8.615850e-47 |
| Msa0683730 | Msa1284260 | 0.806019 | 1.007785e-49 | -8.615850e-47 |
| Msa0683730 | Msa1284550 | 0.832432 | 9.484484e-56 | -8.615850e-47 |
| Msa0683730 | Msa1284680 | 0.819549 | 1.095544e-52 | -8.615850e-47 |
| Msa0683730 | Msa1286800 | 0.826414 | 2.748483e-54 | -8.615850e-47 |
| Msa0683730 | Msa1287220 | 0.811345 | 7.335590e-51 | -8.615850e-47 |
| Msa0683730 | Msa1295630 | 0.820597 | 6.307316e-53 | -8.615850e-47 |
| Msa0683730 | Msa1303240 | 0.812303 | 4.538219e-51 | -8.615850e-47 |
| Msa0683730 | Msa1303250 | 0.822794 | 1.957590e-53 | -8.615850e-47 |
| Msa0683730 | Msa1306860 | 0.814038 | 1.887914e-51 | -8.615850e-47 |
| Msa0683730 | Msa1308380 | 0.808104 | 3.648241e-50 | -8.615850e-47 |
| Msa0683730 | Msa1313150 | 0.811141 | 8.121251e-51 | -8.615850e-47 |
| Msa0683730 | Msa1313320 | 0.812808 | 3.518531e-51 | -8.615850e-47 |
| Msa0683730 | Msa1322890 | 0.803925 | 2.761584e-49 | -8.615850e-47 |
| Msa0683730 | Msa1323050 | 0.809460 | 1.871735e-50 | -8.615850e-47 |
| Msa0683730 | Msa1327050 | 0.805776 | 1.133605e-49 | -8.615850e-47 |
| Msa0683730 | Msa1328710 | 0.806118 | 9.607492e-50 | -8.615850e-47 |
| Msa0683730 | Msa1336710 | 0.822529 | 2.256264e-53 | -8.615850e-47 |
| Msa0683730 | Msa1342900 | 0.800270 | 1.559110e-48 | -8.615850e-47 |
| Msa0683730 | Msa1345360 | 0.812354 | 4.423384e-51 | -8.615850e-47 |
| Msa0683730 | Msa1353470 | 0.844839 | 5.896095e-59 | -8.615850e-47 |
| Msa0683730 | Msa1353980 | 0.803020 | 4.255146e-49 | -8.615850e-47 |
| Msa0683730 | Msa1357890 | 0.805945 | 1.044694e-49 | -8.615850e-47 |
| Msa0683730 | Msa1359040 | 0.810434 | 1.155129e-50 | -8.615850e-47 |
| Msa0683730 | Msa1361400 | 0.801119 | 1.046643e-48 | -8.615850e-47 |
| Msa0683730 | Msa1361410 | 0.813027 | 3.150741e-51 | -8.615850e-47 |
| Msa0683730 | Msa1367590 | 0.812879 | 3.395460e-51 | -8.615850e-47 |
| Msa0683730 | Msa1372760 | 0.831638 | 1.489991e-55 | -8.615850e-47 |
| Msa0683730 | Msa1374040 | 0.810516 | 1.108823e-50 | -8.615850e-47 |
| Msa0683730 | Msa1374550 | 0.813488 | 2.495155e-51 | -8.615850e-47 |
| Msa0683730 | Msa1375560 | 0.816265 | 6.045416e-52 | -8.615850e-47 |
| Msa0683730 | Msa1377760 | 0.807171 | 5.757678e-50 | -8.615850e-47 |
| Msa0683730 | Msa1390800 | 0.800285 | 1.548580e-48 | -8.615850e-47 |
| Msa0683730 | Msa1392820 | 0.808510 | 2.990010e-50 | -8.615850e-47 |
| Msa0683730 | Msa1398090 | 0.815586 | 8.568813e-52 | -8.615850e-47 |
| Msa0683730 | Msa1402400 | 0.801930 | 7.135790e-49 | -8.615850e-47 |
| Msa0683730 | Msa1403890 | 0.801545 | 8.560247e-49 | -8.615850e-47 |
| Msa0683730 | Msa1411700 | 0.810790 | 9.676503e-51 | -8.615850e-47 |
| Msa0683730 | Msa1422580 | 0.821605 | 3.693447e-53 | -8.615850e-47 |
| Msa0683730 | Msa1423880 | 0.815299 | 9.924611e-52 | -8.615850e-47 |
| Msa0683730 | Msa1429680 | 0.812139 | 4.926049e-51 | -8.615850e-47 |
| Msa0683730 | Msa1433390 | 0.811238 | 7.738325e-51 | -8.615850e-47 |
| Msa0683730 | Msa1435270 | 0.832546 | 8.885894e-56 | -8.615850e-47 |
| Msa0683730 | Msa1439610 | 0.822628 | 2.139989e-53 | -8.615850e-47 |
| Msa0683730 | Msa1446810 | 0.810670 | 1.027190e-50 | -8.615850e-47 |
| Msa0683730 | Msa1448510 | 0.821224 | 4.523978e-53 | -8.615850e-47 |
| Msa0683730 | Msa1448640 | 0.802622 | 5.141634e-49 | -8.615850e-47 |
| Msa0683730 | Msa1451160 | 0.826661 | 2.400666e-54 | -8.615850e-47 |
| Msa0683730 | Msa1458610 | 0.828049 | 1.115900e-54 | -8.615850e-47 |
| Msa0683730 | Msa1459180 | 0.807563 | 4.754876e-50 | -8.615850e-47 |
| Msa0683730 | Msa1460020 | 0.801653 | 8.134374e-49 | -8.615850e-47 |
| Msa0683730 | Msa1462290 | 0.817084 | 3.961225e-52 | -8.615850e-47 |
| Msa0683730 | Msa1465300 | 0.851818 | 6.926964e-61 | -8.615850e-47 |
| Msa0683730 | Msa1466540 | 0.819724 | 9.994542e-53 | -8.615850e-47 |
| Msa0124060 | Msa0683730 | 0.800798 | 1.216928e-48 | -8.615850e-47 |
| Msa0127800 | Msa0683730 | 0.810935 | 8.999953e-51 | -8.615850e-47 |
| Msa0131770 | Msa0683730 | 0.807805 | 4.225012e-50 | -8.615850e-47 |
| Msa0137840 | Msa0683730 | 0.801079 | 1.066446e-48 | -8.615850e-47 |
| Msa0145580 | Msa0683730 | 0.808727 | 2.686902e-50 | -8.615850e-47 |
| Msa0146260 | Msa0683730 | 0.807389 | 5.177692e-50 | -8.615850e-47 |
| Msa0148100 | Msa0683730 | 0.819568 | 1.084574e-52 | -8.615850e-47 |
| Msa0150570 | Msa0683730 | 0.816447 | 5.505119e-52 | -8.615850e-47 |
| Msa0152400 | Msa0683730 | 0.824405 | 8.215989e-54 | -8.615850e-47 |
| Msa0157290 | Msa0683730 | 0.837827 | 4.130063e-57 | -8.615850e-47 |
| Msa0168500 | Msa0683730 | 0.820156 | 7.959417e-53 | -8.615850e-47 |
| Msa0170230 | Msa0683730 | 0.809995 | 1.436527e-50 | -8.615850e-47 |
| Msa0184040 | Msa0683730 | 0.810206 | 1.293372e-50 | -8.615850e-47 |
| Msa0195630 | Msa0683730 | 0.818132 | 2.298938e-52 | -8.615850e-47 |
| Msa0195980 | Msa0683730 | 0.803514 | 3.361924e-49 | -8.615850e-47 |
| Msa0196690 | Msa0683730 | 0.803964 | 2.710791e-49 | -8.615850e-47 |
| Msa0197420 | Msa0683730 | 0.818167 | 2.257361e-52 | -8.615850e-47 |
| Msa0201500 | Msa0683730 | 0.800534 | 1.378051e-48 | -8.615850e-47 |
| Msa0205510 | Msa0683730 | 0.831007 | 2.130636e-55 | -8.615850e-47 |
| Msa0206010 | Msa0683730 | 0.802491 | 5.471531e-49 | -8.615850e-47 |
| Msa0208350 | Msa0683730 | 0.800623 | 1.321614e-48 | -8.615850e-47 |
| Msa0211150 | Msa0683730 | 0.815504 | 8.939396e-52 | -8.615850e-47 |
| Msa0212930 | Msa0683730 | 0.803554 | 3.298699e-49 | -8.615850e-47 |
| Msa0212990 | Msa0683730 | 0.804369 | 2.233362e-49 | -8.615850e-47 |
| Msa0213520 | Msa0683730 | 0.815071 | 1.115512e-51 | -8.615850e-47 |
| Msa0218810 | Msa0683730 | 0.802555 | 5.307565e-49 | -8.615850e-47 |
| Msa0220250 | Msa0683730 | 0.800343 | 1.506925e-48 | -8.615850e-47 |
| Msa0220740 | Msa0683730 | 0.801004 | 1.104846e-48 | -8.615850e-47 |
| Msa0229740 | Msa0683730 | 0.806604 | 7.588505e-50 | -8.615850e-47 |
| Msa0237310 | Msa0683730 | 0.814551 | 1.454254e-51 | -8.615850e-47 |
| Msa0237410 | Msa0683730 | 0.810833 | 9.467667e-51 | -8.615850e-47 |
| Msa0369850 | Msa0683730 | 0.802911 | 4.480230e-49 | -8.615850e-47 |
| Msa0376350 | Msa0683730 | 0.832709 | 8.098321e-56 | -8.615850e-47 |
| Msa0379640 | Msa0683730 | 0.809343 | 1.982693e-50 | -8.615850e-47 |
| Msa0388960 | Msa0683730 | 0.816554 | 5.209480e-52 | -8.615850e-47 |
| Msa0389340 | Msa0683730 | 0.805210 | 1.490105e-49 | -8.615850e-47 |
| Msa0393080 | Msa0683730 | 0.800991 | 1.111297e-48 | -8.615850e-47 |
| Msa0405570 | Msa0683730 | 0.802197 | 6.288613e-49 | -8.615850e-47 |
| Msa0406770 | Msa0683730 | 0.806199 | 9.239321e-50 | -8.615850e-47 |
| Msa0410500 | Msa0683730 | 0.811007 | 8.681819e-51 | -8.615850e-47 |
| Msa0410650 | Msa0683730 | 0.822235 | 2.640038e-53 | -8.615850e-47 |
| Msa0420960 | Msa0683730 | 0.817450 | 3.277395e-52 | -8.615850e-47 |
| Msa0422850 | Msa0683730 | 0.827239 | 1.746011e-54 | -8.615850e-47 |
| Msa0422930 | Msa0683730 | 0.828525 | 8.565886e-55 | -8.615850e-47 |
| Msa0423520 | Msa0683730 | 0.807044 | 6.126247e-50 | -8.615850e-47 |
| Msa0424790 | Msa0683730 | 0.813369 | 2.651013e-51 | -8.615850e-47 |
| Msa0426640 | Msa0683730 | 0.804905 | 1.725824e-49 | -8.615850e-47 |
| Msa0439970 | Msa0683730 | 0.816047 | 6.761317e-52 | -8.615850e-47 |
| Msa0440750 | Msa0683730 | 0.816237 | 6.134748e-52 | -8.615850e-47 |
| Msa0449830 | Msa0683730 | 0.802756 | 4.823596e-49 | -8.615850e-47 |
| Msa0450720 | Msa0683730 | 0.803384 | 3.576807e-49 | -8.615850e-47 |
| Msa0453350 | Msa0683730 | 0.823254 | 1.529136e-53 | -8.615850e-47 |
| Msa0461720 | Msa0683730 | 0.804814 | 1.803413e-49 | -8.615850e-47 |
| Msa0467060 | Msa0683730 | 0.828216 | 1.017254e-54 | -8.615850e-47 |
| Msa0469160 | Msa0683730 | 0.809937 | 1.477735e-50 | -8.615850e-47 |
| Msa0475790 | Msa0683730 | 0.817035 | 4.063666e-52 | -8.615850e-47 |
| Msa0479170 | Msa0683730 | 0.825235 | 5.235004e-54 | -8.615850e-47 |
| Msa0481530 | Msa0683730 | 0.802367 | 5.801495e-49 | -8.615850e-47 |
| Msa0241800 | Msa0683730 | 0.805506 | 1.291623e-49 | -8.615850e-47 |
| Msa0243100 | Msa0683730 | 0.803200 | 3.904886e-49 | -8.615850e-47 |
| Msa0253200 | Msa0683730 | 0.823277 | 1.510608e-53 | -8.615850e-47 |
| Msa0258310 | Msa0683730 | 0.804843 | 1.778260e-49 | -8.615850e-47 |
| Msa0259500 | Msa0683730 | 0.836281 | 1.025792e-56 | -8.615850e-47 |
| Msa0261550 | Msa0683730 | 0.800137 | 1.659371e-48 | -8.615850e-47 |
| Msa0262340 | Msa0683730 | 0.800154 | 1.646078e-48 | -8.615850e-47 |
| Msa0274730 | Msa0683730 | 0.814486 | 1.503592e-51 | -8.615850e-47 |
| Msa0276130 | Msa0683730 | 0.803939 | 2.743669e-49 | -8.615850e-47 |
| Msa0283640 | Msa0683730 | 0.823654 | 1.233006e-53 | -8.615850e-47 |
| Msa0284410 | Msa0683730 | 0.815296 | 9.939263e-52 | -8.615850e-47 |
| Msa0287410 | Msa0683730 | 0.808390 | 3.171549e-50 | -8.615850e-47 |
| Msa0287650 | Msa0683730 | 0.822953 | 1.797634e-53 | -8.615850e-47 |
| Msa0287740 | Msa0683730 | 0.800833 | 1.197030e-48 | -8.615850e-47 |
| Msa0292030 | Msa0683730 | 0.825157 | 5.462317e-54 | -8.615850e-47 |
| Msa0292400 | Msa0683730 | 0.801420 | 9.082591e-49 | -8.615850e-47 |
| Msa0298700 | Msa0683730 | 0.801551 | 8.535764e-49 | -8.615850e-47 |
| Msa0300690 | Msa0683730 | 0.817210 | 3.710622e-52 | -8.615850e-47 |
| Msa0304510 | Msa0683730 | 0.823533 | 1.316363e-53 | -8.615850e-47 |
| Msa0305700 | Msa0683730 | 0.820284 | 7.439500e-53 | -8.615850e-47 |
| Msa0311700 | Msa0683730 | 0.830208 | 3.343244e-55 | -8.615850e-47 |
| Msa0315290 | Msa0683730 | 0.803330 | 3.671160e-49 | -8.615850e-47 |
| Msa0315530 | Msa0683730 | 0.818224 | 2.191718e-52 | -8.615850e-47 |
| Msa0316410 | Msa0683730 | 0.803540 | 3.320593e-49 | -8.615850e-47 |
| Msa0316810 | Msa0683730 | 0.817601 | 3.029756e-52 | -8.615850e-47 |
| Msa0322690 | Msa0683730 | 0.800644 | 1.308172e-48 | -8.615850e-47 |
| Msa0326110 | Msa0683730 | 0.805916 | 1.059254e-49 | -8.615850e-47 |
| Msa0333920 | Msa0683730 | 0.817837 | 2.680260e-52 | -8.615850e-47 |
| Msa0334040 | Msa0683730 | 0.818737 | 1.676354e-52 | -8.615850e-47 |
| Msa0339500 | Msa0683730 | 0.814063 | 1.864656e-51 | -8.615850e-47 |
| Msa0341540 | Msa0683730 | 0.843321 | 1.505585e-58 | -8.615850e-47 |
| Msa0343850 | Msa0683730 | 0.826438 | 2.712224e-54 | -8.615850e-47 |
| Msa0357340 | Msa0683730 | 0.800403 | 1.465394e-48 | -8.615850e-47 |
| Msa0360210 | Msa0683730 | 0.807725 | 4.392972e-50 | -8.615850e-47 |
| Msa0363790 | Msa0683730 | 0.804555 | 2.042211e-49 | -8.615850e-47 |
| Msa0484780 | Msa0683730 | 0.816446 | 5.506011e-52 | -8.615850e-47 |
| Msa0488560 | Msa0683730 | 0.814897 | 1.219116e-51 | -8.615850e-47 |
| Msa0495320 | Msa0683730 | 0.814940 | 1.192533e-51 | -8.615850e-47 |
| Msa0498060 | Msa0683730 | 0.820647 | 6.142162e-53 | -8.615850e-47 |
| Msa0507680 | Msa0683730 | 0.825230 | 5.249383e-54 | -8.615850e-47 |
| Msa0516040 | Msa0683730 | 0.800353 | 1.499531e-48 | -8.615850e-47 |
| Msa0516170 | Msa0683730 | 0.822170 | 2.734025e-53 | -8.615850e-47 |
| Msa0523460 | Msa0683730 | 0.848642 | 5.383117e-60 | -8.615850e-47 |
| Msa0524500 | Msa0683730 | 0.826905 | 2.098461e-54 | -8.615850e-47 |
| Msa0546540 | Msa0683730 | 0.836778 | 7.663314e-57 | -8.615850e-47 |
| Msa0547160 | Msa0683730 | 0.802701 | 4.951432e-49 | -8.615850e-47 |
| Msa0547890 | Msa0683730 | 0.943696 | 7.544163e-103 | -8.615850e-47 |
| Msa0556060 | Msa0683730 | 0.812056 | 5.135985e-51 | -8.615850e-47 |
| Msa0566020 | Msa0683730 | 0.804362 | 2.240758e-49 | -8.615850e-47 |
| Msa0574890 | Msa0683730 | 0.838617 | 2.585124e-57 | -8.615850e-47 |
| Msa0576880 | Msa0683730 | 0.809343 | 1.982693e-50 | -8.615850e-47 |
| Msa0585300 | Msa0683730 | 0.802078 | 6.653637e-49 | -8.615850e-47 |
| Msa0585900 | Msa0683730 | 0.801433 | 9.026242e-49 | -8.615850e-47 |
| Msa0594660 | Msa0683730 | 0.803481 | 3.414850e-49 | -8.615850e-47 |
| Msa0601750 | Msa0683730 | 0.808155 | 3.558496e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683730 | MtrunA17_Chr4g0030781 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Msa0683730 | MtrunA17_Chr4g0030791 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Msa0683730 | MtrunA17_Chr4g0036721 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Msa0683730 | MtrunA17_Chr4g0014171 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 708 |
| Msa0683730 | MtrunA17_Chr5g0405881 | 84.038 | 213 | 7 | 1 | 144 | 356 | 71 | 256 | 1.87e-123 | 355 |
| Msa0683730 | MtrunA17_Chr8g0380731 | 41.457 | 357 | 206 | 3 | 1 | 354 | 1 | 357 | 3.00e-101 | 303 |
| Msa0683730 | MtrunA17_Chr8g0380741 | 40.517 | 348 | 205 | 2 | 1 | 346 | 1 | 348 | 1.35e-95 | 288 |
| Msa0683730 | MtrunA17_Chr8g0380751 | 39.867 | 301 | 179 | 2 | 29 | 327 | 1 | 301 | 1.24e-82 | 254 |
| Msa0683730 | MtrunA17_Chr7g0227371 | 91.667 | 36 | 3 | 0 | 31 | 66 | 1 | 36 | 6.11e-15 | 69.7 |
| Msa0683730 | MtrunA17_Chr7g0261321 | 28.750 | 160 | 111 | 2 | 196 | 353 | 365 | 523 | 1.34e-13 | 72.0 |
| Msa0683730 | MtrunA17_Chr7g0261321 | 25.389 | 193 | 102 | 5 | 30 | 180 | 61 | 253 | 1.77e-11 | 65.5 |
| Msa0683730 | MtrunA17_Chr2g0326201 | 32.374 | 139 | 86 | 5 | 200 | 333 | 87 | 222 | 4.57e-12 | 65.5 |
| Msa0683730 | MtrunA17_Chr2g0326061 | 27.778 | 180 | 119 | 7 | 181 | 355 | 295 | 468 | 1.10e-11 | 65.9 |
| Msa0683730 | MtrunA17_Chr2g0326171 | 29.012 | 162 | 104 | 7 | 200 | 355 | 295 | 451 | 1.80e-11 | 65.1 |
| Msa0683730 | MtrunA17_Chr2g0326191 | 32.143 | 140 | 87 | 5 | 200 | 334 | 310 | 446 | 2.00e-11 | 65.1 |
| Msa0683730 | MtrunA17_Chr1g0185811 | 28.671 | 143 | 95 | 4 | 196 | 335 | 422 | 560 | 2.47e-11 | 65.1 |
| Msa0683730 | MtrunA17_Chr2g0326071 | 28.395 | 162 | 105 | 7 | 200 | 355 | 295 | 451 | 4.26e-11 | 63.9 |
| Msa0683730 | MtrunA17_Chr1g0185821 | 28.671 | 143 | 95 | 4 | 196 | 335 | 391 | 529 | 5.98e-11 | 63.5 |
| Msa0683730 | MtrunA17_Chr4g0029921 | 32.743 | 113 | 73 | 3 | 223 | 333 | 307 | 418 | 6.23e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683730 | AT1G07750.1 | 80.056 | 356 | 71 | 0 | 1 | 356 | 1 | 356 | 0.0 | 595 |
| Msa0683730 | AT2G28680.1 | 79.494 | 356 | 73 | 0 | 1 | 356 | 1 | 356 | 0.0 | 590 |
| Msa0683730 | AT1G03890.1 | 24.694 | 409 | 244 | 11 | 5 | 354 | 44 | 447 | 1.05e-31 | 124 |
| Msa0683730 | AT1G03880.1 | 23.214 | 392 | 235 | 9 | 12 | 339 | 42 | 431 | 6.50e-28 | 114 |
| Msa0683730 | AT5G44120.3 | 22.475 | 396 | 234 | 8 | 12 | 336 | 48 | 441 | 3.99e-24 | 103 |
| Msa0683730 | AT5G44120.2 | 23.780 | 328 | 203 | 7 | 54 | 336 | 12 | 337 | 1.46e-20 | 92.0 |
| Msa0683730 | AT4G28520.1 | 25.581 | 301 | 181 | 7 | 78 | 336 | 193 | 492 | 1.87e-18 | 87.0 |
| Msa0683730 | AT4G28520.3 | 30.714 | 140 | 96 | 1 | 197 | 336 | 283 | 421 | 1.64e-15 | 77.8 |
| Msa0683730 | AT2G28490.1 | 23.514 | 370 | 213 | 12 | 51 | 355 | 131 | 495 | 1.34e-14 | 75.1 |
| Msa0683730 | AT5G44120.1 | 24.123 | 228 | 145 | 4 | 136 | 336 | 28 | 254 | 8.51e-14 | 71.2 |
Find 114 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCCATTCTACTTTAATT+TGG | 0.176642 | 4_4:+46620622 | None:intergenic |
| CCTTTCTTGTGTTCCTCTTT+AGG | 0.185981 | 4_4:+46621553 | None:intergenic |
| AGAAAAGGTTGTTGCAATTA+AGG | 0.194128 | 4_4:-46621857 | Msa0683730:CDS |
| CTCTTGTGATTCTGCTTTGC+AGG | 0.207745 | 4_4:-46621371 | Msa0683730:CDS |
| AAGCCAGACTTATACTTAAA+AGG | 0.221397 | 4_4:+46620345 | None:intergenic |
| CGGAAAAGCTTCTCAACTTC+TGG | 0.246295 | 4_4:+46620682 | None:intergenic |
| GGTCCTAATGGAATCTTTAC+TGG | 0.258702 | 4_4:-46621697 | Msa0683730:CDS |
| TGCAGGTTACTTACATTGTT+AGG | 0.269206 | 4_4:-46621354 | Msa0683730:CDS |
| GTGTGTATTTATAAGTATAT+TGG | 0.297298 | 4_4:+46623022 | None:intergenic |
| TTGCATGATGAATACAAATA+AGG | 0.315233 | 4_4:-46620398 | Msa0683730:three_prime_UTR |
| CTTCCTTTGGTTGGTGAGGT+TGG | 0.336501 | 4_4:-46621448 | Msa0683730:CDS |
| AGGCATGGCTTTGAACTGTT+TGG | 0.348039 | 4_4:-46621533 | Msa0683730:CDS |
| TTGGTTGGTGAGGTTGGTTT+AGG | 0.350208 | 4_4:-46621442 | Msa0683730:CDS |
| ATTTGGAGGAGGGAAGAAAA+TGG | 0.351352 | 4_4:+46620639 | None:intergenic |
| TAGGGGAAGTGGCCGTGTTC+AGG | 0.353324 | 4_4:-46621335 | Msa0683730:CDS |
| GTTCAGGTTGTTGGTGTTGA+TGG | 0.356237 | 4_4:-46621319 | Msa0683730:CDS |
| TGTGGGAAGGGCTTGGGACT+TGG | 0.357118 | 4_4:-46621659 | Msa0683730:CDS |
| GGAAGATCCATGTGCTCTCC+TGG | 0.372229 | 4_4:-46621397 | Msa0683730:CDS |
| CTGAGTTTGTGGGAAGGGCT+TGG | 0.373540 | 4_4:-46621666 | Msa0683730:CDS |
| TGAGTTTGTGGGAAGGGCTT+GGG | 0.376069 | 4_4:-46621665 | Msa0683730:CDS |
| CGTAATTAGTGAATGAGTAT+TGG | 0.384383 | 4_4:-46623143 | Msa0683730:five_prime_UTR |
| GAGGTACTCTGATTCTTCTA+AGG | 0.392927 | 4_4:-46622755 | Msa0683730:CDS |
| GCAGGTTACTTACATTGTTA+GGG | 0.404646 | 4_4:-46621353 | Msa0683730:CDS |
| GCTGATCTTGTGAGGATTGA+TGG | 0.405011 | 4_4:-46621418 | Msa0683730:CDS |
| AAGGAATTGATTGCCTCAAT+TGG | 0.408989 | 4_4:-46620511 | Msa0683730:three_prime_UTR |
| AAGGTTGCTTATGTTCTTCA+AGG | 0.410175 | 4_4:-46622736 | Msa0683730:intron |
| AACAATGTGAAGACACTTGT+TGG | 0.410461 | 4_4:-46621631 | Msa0683730:CDS |
| GATGCTTTAGCACTCCCCTT+TGG | 0.411635 | 4_4:-46621829 | Msa0683730:CDS |
| ACCAACCAAAGGAAGGTTCT+TGG | 0.412307 | 4_4:+46621456 | None:intergenic |
| AAAGGGATTGTGAAGCTTGA+TGG | 0.412975 | 4_4:-46621595 | Msa0683730:CDS |
| GAACACCAAGAACCTTCCTT+TGG | 0.413394 | 4_4:-46621461 | Msa0683730:CDS |
| TCCATTCTACTTTAATTTGG+AGG | 0.417794 | 4_4:+46620625 | None:intergenic |
| CATGCAAGAATTGTATCTAA+TGG | 0.418961 | 4_4:+46620414 | None:intergenic |
| TACACTTTCTTCGCCGATTG+AGG | 0.424668 | 4_4:+46622892 | None:intergenic |
| AGTGGCCGTGTTCAGGTTGT+TGG | 0.428776 | 4_4:-46621328 | Msa0683730:CDS |
| ATCAAGCTTCACAATCCCTT+TGG | 0.429226 | 4_4:+46621597 | None:intergenic |
| TTGTGTTCCTCTTTAGGCTC+AGG | 0.430393 | 4_4:+46621559 | None:intergenic |
| AATCCAGTAAAGATTCCATT+AGG | 0.431957 | 4_4:+46621694 | None:intergenic |
| AAGTTAGCTCTTCTGAAGAA+TGG | 0.432091 | 4_4:-46622790 | Msa0683730:CDS |
| ACTTACATTGTTAGGGGAAG+TGG | 0.437332 | 4_4:-46621346 | Msa0683730:CDS |
| ACACATGGCTGGAAGTTCTT+CGG | 0.454286 | 4_4:-46620755 | Msa0683730:CDS |
| CATGGCTTTGAACTGTTTGG+AGG | 0.461927 | 4_4:-46621530 | Msa0683730:CDS |
| ACCAAGAACCTTCCTTTGGT+TGG | 0.462283 | 4_4:-46621457 | Msa0683730:CDS |
| TCCTCCAAATTAAAGTAGAA+TGG | 0.462317 | 4_4:-46620626 | Msa0683730:exon |
| CACCATGTCACAACACCAAA+GGG | 0.465835 | 4_4:+46621814 | None:intergenic |
| TCCCCTTTGGTGTTGTGACA+TGG | 0.472969 | 4_4:-46621816 | Msa0683730:CDS |
| GAGTTGGTTGTTCTGTTCCT+CGG | 0.474191 | 4_4:-46621772 | Msa0683730:CDS |
| AGTCTTGGAGACCACTTTGA+AGG | 0.476765 | 4_4:-46621290 | Msa0683730:CDS |
| TTGGAGACCACTTTGAAGGC+TGG | 0.478375 | 4_4:-46621286 | Msa0683730:CDS |
| TTCAACTGAGTTTGTGGGAA+GGG | 0.479133 | 4_4:-46621671 | Msa0683730:CDS |
| AAGCTTCACAATCCCTTTGG+CGG | 0.479301 | 4_4:+46621600 | None:intergenic |
| GATACAGGAAGTGGAGTTGC+TGG | 0.481664 | 4_4:-46621901 | Msa0683730:intron |
| TATCGATCTTTCTCCTCAAT+CGG | 0.484260 | 4_4:-46622905 | Msa0683730:CDS |
| GAACCTTCCTTTGGTTGGTG+AGG | 0.484774 | 4_4:-46621452 | Msa0683730:CDS |
| GAACTGTTTGGAGGCACCAT+TGG | 0.492260 | 4_4:-46621521 | Msa0683730:CDS |
| GCTACCTGAATCAGAAGAAA+AGG | 0.493511 | 4_4:-46621872 | Msa0683730:CDS |
| TCGAAGATTGCTGACAATGA+TGG | 0.499253 | 4_4:-46621229 | Msa0683730:CDS |
| TCAAAGACAGATCAAAATAG+AGG | 0.499442 | 4_4:+46620475 | None:intergenic |
| ATTCTACTTTAATTTGGAGG+AGG | 0.504281 | 4_4:+46620628 | None:intergenic |
| TGGAAGTTCTTCGGTGTGGA+AGG | 0.510879 | 4_4:-46620746 | Msa0683730:CDS |
| CAGCCTTCCTGAGCCTAAAG+AGG | 0.511945 | 4_4:-46621566 | Msa0683730:CDS |
| CAGTCCTGTATTTACACACA+TGG | 0.513502 | 4_4:-46620770 | Msa0683730:CDS |
| CCAGCCATGTGTGTAAATAC+AGG | 0.517118 | 4_4:+46620766 | None:intergenic |
| TTGGATGTTGATATTAAGAA+TGG | 0.538544 | 4_4:-46621502 | Msa0683730:CDS |
| GCTATCACCTACAGTTCTGC+AGG | 0.538663 | 4_4:-46620722 | Msa0683730:CDS |
| TTGGAAAGCAATCCGCCAAA+GGG | 0.540566 | 4_4:-46621612 | Msa0683730:CDS |
| AGATTCCATTAGGACCAGTC+AGG | 0.543055 | 4_4:+46621704 | None:intergenic |
| CCTAAAGAGGAACACAAGAA+AGG | 0.543963 | 4_4:-46621553 | Msa0683730:CDS |
| AAAGGTTGTTGCAATTAAGG+AGG | 0.546053 | 4_4:-46621854 | Msa0683730:CDS |
| TTCTACTTTAATTTGGAGGA+GGG | 0.549544 | 4_4:+46620629 | None:intergenic |
| CCTGTATTTACACACATGGC+TGG | 0.553443 | 4_4:-46620766 | Msa0683730:CDS |
| GTTTAGGAGCTGATCTTGTG+AGG | 0.556251 | 4_4:-46621426 | Msa0683730:CDS |
| TTGATATTAAGAATGGTGGA+AGG | 0.557402 | 4_4:-46621495 | Msa0683730:CDS |
| GTTCCTCTTTAGGCTCAGGA+AGG | 0.561301 | 4_4:+46621563 | None:intergenic |
| ATGTTACCTTGACGCAACAT+AGG | 0.563061 | 4_4:+46622823 | None:intergenic |
| TGTTGATGGTAAGAGAGTCT+TGG | 0.566059 | 4_4:-46621305 | Msa0683730:CDS |
| GCAGAATCACAAGAGAATCC+AGG | 0.572154 | 4_4:+46621379 | None:intergenic |
| TAAGCCCCTAAAACCAATTG+AGG | 0.572854 | 4_4:+46620498 | None:intergenic |
| AGAGAATCCAGGAGAGCACA+TGG | 0.578294 | 4_4:+46621390 | None:intergenic |
| ACTTCAAAAGCACACAAGGC+TGG | 0.580061 | 4_4:-46621745 | Msa0683730:CDS |
| GATGTTGATATTAAGAATGG+TGG | 0.582311 | 4_4:-46621499 | Msa0683730:CDS |
| CGCAACATAGGAAGCTCAGA+AGG | 0.585364 | 4_4:+46622835 | None:intergenic |
| CATCAGCAGTCCTCTTTGAA+CGG | 0.585723 | 4_4:+46620662 | None:intergenic |
| AAGGTTGTTGCAATTAAGGA+GGG | 0.587151 | 4_4:-46621853 | Msa0683730:CDS |
| AAGAAAGTGTACGGTGGTGA+TGG | 0.591740 | 4_4:-46622880 | Msa0683730:CDS |
| TTCTTAATATCAACATCCAA+TGG | 0.592422 | 4_4:+46621505 | None:intergenic |
| GTTGGAAAGCAATCCGCCAA+AGG | 0.593219 | 4_4:-46621613 | Msa0683730:CDS |
| AAAGCAGCCTGCAGAACTGT+AGG | 0.593333 | 4_4:+46620715 | None:intergenic |
| CGATACTTCAAAAGCACACA+AGG | 0.594218 | 4_4:-46621749 | Msa0683730:CDS |
| ATGGTGGATCGTACTATGCT+TGG | 0.594357 | 4_4:-46622861 | Msa0683730:CDS |
| GATTGCTGACAATGATGGAA+TGG | 0.599379 | 4_4:-46621224 | Msa0683730:CDS |
| AAAGTGTACGGTGGTGATGG+TGG | 0.599662 | 4_4:-46622877 | Msa0683730:CDS |
| CCACCATGTCACAACACCAA+AGG | 0.611673 | 4_4:+46621813 | None:intergenic |
| CAACAAAGAGGACACTGAGT+TGG | 0.612479 | 4_4:-46621788 | Msa0683730:CDS |
| CAACCTCACCAACCAAAGGA+AGG | 0.617830 | 4_4:+46621449 | None:intergenic |
| TTTCAACTGAGTTTGTGGGA+AGG | 0.619355 | 4_4:-46621672 | Msa0683730:CDS |
| CAGGTTACTTACATTGTTAG+GGG | 0.620675 | 4_4:-46621352 | Msa0683730:CDS |
| CAACACCAACAACCTGAACA+CGG | 0.621513 | 4_4:+46621323 | None:intergenic |
| CAATCGGCGAAGAAAGTGTA+CGG | 0.625964 | 4_4:-46622889 | Msa0683730:CDS |
| CAAATCTCCAGCCTTCAAAG+TGG | 0.631181 | 4_4:+46621279 | None:intergenic |
| AGAGGAACACAAGAAAGGCA+TGG | 0.634599 | 4_4:-46621548 | Msa0683730:CDS |
| AAACCAACCTCACCAACCAA+AGG | 0.641668 | 4_4:+46621445 | None:intergenic |
| TGGCTGGAAGTTCTTCGGTG+TGG | 0.642740 | 4_4:-46620750 | Msa0683730:CDS |
| GAGCTTCCTATGTTGCGTCA+AGG | 0.643057 | 4_4:-46622829 | Msa0683730:CDS |
| GAGATTTGTTCATTGTACCG+AGG | 0.645213 | 4_4:-46621264 | Msa0683730:CDS |
| CCTTTGGTGTTGTGACATGG+TGG | 0.659432 | 4_4:-46621813 | Msa0683730:CDS |
| TGATATTAAGAATGGTGGAA+GGG | 0.666660 | 4_4:-46621494 | Msa0683730:CDS |
| ATGTTGCGTCAAGGTAACAT+TGG | 0.668475 | 4_4:-46622820 | Msa0683730:CDS |
| GACATGGTGGTACAACAAAG+AGG | 0.672878 | 4_4:-46621800 | Msa0683730:CDS |
| TTAGAAGAATCAGAGTACCT+CGG | 0.684154 | 4_4:+46622757 | None:intergenic |
| ATGATAACGAGTATTAGTAG+CGG | 0.722650 | 4_4:-46623120 | Msa0683730:five_prime_UTR |
| ACCATGTCACAACACCAAAG+GGG | 0.723908 | 4_4:+46621815 | None:intergenic |
| CTGACAATGATGGAATGGAG+TGG | 0.742748 | 4_4:-46621219 | Msa0683730:CDS |
| TCGGCGAAGAAAGTGTACGG+TGG | 0.763757 | 4_4:-46622886 | Msa0683730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATTCACTAAAAT+CGG | - | chr4_4:46621136-46621155 | Msa0683730:intron | 10.0% |
| !!! | ATTTTTCAAAAAAGTTGAAA+CGG | - | chr4_4:46621094-46621113 | Msa0683730:intron | 15.0% |
| !!! | TTTTAGTGAATTTTTTTTTC+TGG | + | chr4_4:46621135-46621154 | None:intergenic | 15.0% |
| !!! | TTTTTAACATTTGTATCAAA+CGG | - | chr4_4:46621228-46621247 | Msa0683730:CDS | 15.0% |
| !!! | ATAAAGTTATTTTAACTGTA+TGG | + | chr4_4:46621385-46621404 | None:intergenic | 15.0% |
| !!! | AACTTTATTTTTATACATCA+TGG | - | chr4_4:46621397-46621416 | Msa0683730:CDS | 15.0% |
| !! | TACTACTATAATATCAATAT+TGG | + | chr4_4:46621489-46621508 | None:intergenic | 15.0% |
| !! | TGTAATCAAATATATTTACT+AGG | - | chr4_4:46622575-46622594 | Msa0683730:intron | 15.0% |
| !!! | AAGTTTTTTTAGTTTTGTTA+TGG | - | chr4_4:46622883-46622902 | Msa0683730:CDS | 15.0% |
| !!! | ACTTTTATTTTGGATTTATA+AGG | - | chr4_4:46622952-46622971 | Msa0683730:five_prime_UTR | 15.0% |
| !! | GTGTGTATTTATAAGTATAT+TGG | + | chr4_4:46620463-46620482 | None:intergenic | 20.0% |
| !!! | GTTTTATTTGTCATTATGTT+TGG | - | chr4_4:46620982-46621001 | Msa0683730:intron | 20.0% |
| !! | TATGTTTGGATGATTATAAA+AGG | - | chr4_4:46620996-46621015 | Msa0683730:intron | 20.0% |
| !! | ATGTTTGGATGATTATAAAA+GGG | - | chr4_4:46620997-46621016 | Msa0683730:intron | 20.0% |
| !! | TTTGTTAGGGATTATAAAAA+AGG | - | chr4_4:46621024-46621043 | Msa0683730:intron | 20.0% |
| !!! | AAAAAAATGAATTTCTGAGA+AGG | - | chr4_4:46621161-46621180 | Msa0683730:intron | 20.0% |
| !! | TTCTATTATACCATCAATAT+TGG | + | chr4_4:46621530-46621549 | None:intergenic | 20.0% |
| !! | AGTTAATAAAAACTCACTTA+GGG | + | chr4_4:46622306-46622325 | None:intergenic | 20.0% |
| !! | AAGTTAATAAAAACTCACTT+AGG | + | chr4_4:46622307-46622326 | None:intergenic | 20.0% |
| !! | AACAAATATCAAACAACAAA+AGG | + | chr4_4:46622355-46622374 | None:intergenic | 20.0% |
| !! | TTTCAAAGAAACACAAATTT+GGG | + | chr4_4:46622503-46622522 | None:intergenic | 20.0% |
| !! | ATTTCAAAGAAACACAAATT+TGG | + | chr4_4:46622504-46622523 | None:intergenic | 20.0% |
| !! | ATCAAATATATTTACTAGGA+AGG | - | chr4_4:46622579-46622598 | Msa0683730:intron | 20.0% |
| !! | ATTTCCATTCTACTTTAATT+TGG | + | chr4_4:46622863-46622882 | None:intergenic | 20.0% |
| !! | ACATTTTATGAATGAAGTGT+TGG | + | chr4_4:46620964-46620983 | None:intergenic | 25.0% |
| !!! | TATAAAAGGGTTAGTTTGTT+AGG | - | chr4_4:46621010-46621029 | Msa0683730:intron | 25.0% |
| !!! | ATAAAAGGGTTAGTTTGTTA+GGG | - | chr4_4:46621011-46621030 | Msa0683730:intron | 25.0% |
| ! | TCACAAAAGCAGTATAAAAT+AGG | + | chr4_4:46621463-46621482 | None:intergenic | 25.0% |
| ! | TTTGTGATTACCAATATTGA+TGG | - | chr4_4:46621476-46621495 | Msa0683730:CDS | 25.0% |
| ! | TTCTTAATATCAACATCCAA+TGG | + | chr4_4:46621980-46621999 | None:intergenic | 25.0% |
| ! | TTGGATGTTGATATTAAGAA+TGG | - | chr4_4:46621980-46621999 | Msa0683730:intron | 25.0% |
| ! | GTTAATAAAAACTCACTTAG+GGG | + | chr4_4:46622305-46622324 | None:intergenic | 25.0% |
| !! | TCTAGTGTATACATAGATTT+TGG | - | chr4_4:46622421-46622440 | Msa0683730:intron | 25.0% |
| !! | TCTAGTGTATACATAGATTT+TGG | - | chr4_4:46622421-46622440 | Msa0683730:intron | 25.0% |
| ! | CAATATACCTTGATATTACA+AGG | + | chr4_4:46622629-46622648 | None:intergenic | 25.0% |
| ! | ATACTTATGATTTCTTACTG+TGG | - | chr4_4:46622675-46622694 | Msa0683730:intron | 25.0% |
| !!! | TTTTAGTTTTGTTATGGCAT+TGG | - | chr4_4:46622889-46622908 | Msa0683730:CDS | 25.0% |
| !!! | TAGTTTCTGCACTTTTATTT+TGG | - | chr4_4:46622942-46622961 | Msa0683730:five_prime_UTR | 25.0% |
| ! | TTGCATGATGAATACAAATA+AGG | - | chr4_4:46623084-46623103 | Msa0683730:five_prime_UTR | 25.0% |
| !!! | TTTCCTTTTAAGTATAAGTC+TGG | - | chr4_4:46623134-46623153 | Msa0683730:five_prime_UTR | 25.0% |
| CGTAATTAGTGAATGAGTAT+TGG | - | chr4_4:46620339-46620358 | Msa0683730:three_prime_UTR | 30.0% | |
| ! | ATGATAACGAGTATTAGTAG+CGG | - | chr4_4:46620362-46620381 | Msa0683730:three_prime_UTR | 30.0% |
| !!! | TTTTTTTTGTGTCGTTGCTA+TGG | - | chr4_4:46620553-46620572 | Msa0683730:three_prime_UTR | 30.0% |
| ! | TTTTATGTTGATCCCTCAAT+TGG | - | chr4_4:46620856-46620875 | Msa0683730:intron | 30.0% |
| TTTATGTTGATCCCTCAATT+GGG | - | chr4_4:46620857-46620876 | Msa0683730:intron | 30.0% | |
| !!! | TTTTATGAATGAAGTGTTGG+TGG | + | chr4_4:46620961-46620980 | None:intergenic | 30.0% |
| TAACATTTGTATCAAACGGA+TGG | - | chr4_4:46621232-46621251 | Msa0683730:CDS | 30.0% | |
| ATGAGAAAAGCTATACCAAA+GGG | - | chr4_4:46621307-46621326 | Msa0683730:CDS | 30.0% | |
| TGTTGTGATACTTAATAGTG+AGG | - | chr4_4:46621551-46621570 | Msa0683730:CDS | 30.0% | |
| AGAAAAGGTTGTTGCAATTA+AGG | - | chr4_4:46621625-46621644 | Msa0683730:CDS | 30.0% | |
| !!! | TTTACTGATTTTTTCCTGAC+TGG | - | chr4_4:46621764-46621783 | Msa0683730:CDS | 30.0% |
| AATCCAGTAAAGATTCCATT+AGG | + | chr4_4:46621791-46621810 | None:intergenic | 30.0% | |
| GATGTTGATATTAAGAATGG+TGG | - | chr4_4:46621983-46622002 | Msa0683730:intron | 30.0% | |
| ! | TTGATATTAAGAATGGTGGA+AGG | - | chr4_4:46621987-46622006 | Msa0683730:intron | 30.0% |
| ! | TGATATTAAGAATGGTGGAA+GGG | - | chr4_4:46621988-46622007 | Msa0683730:intron | 30.0% |
| ATGTATACACTAGACAGATT+GGG | + | chr4_4:46622459-46622478 | None:intergenic | 30.0% | |
| TATGTATACACTAGACAGAT+TGG | + | chr4_4:46622416-46622435 | None:intergenic | 30.0% | |
| !! | TTCTACTTTAATTTGGAGGA+GGG | + | chr4_4:46622856-46622875 | None:intergenic | 30.0% |
| !! | ATTCTACTTTAATTTGGAGG+AGG | + | chr4_4:46622857-46622876 | None:intergenic | 30.0% |
| TCCTCCAAATTAAAGTAGAA+TGG | - | chr4_4:46622856-46622875 | Msa0683730:CDS | 30.0% | |
| !! | TCCATTCTACTTTAATTTGG+AGG | + | chr4_4:46622860-46622879 | None:intergenic | 30.0% |
| TCAAAGACAGATCAAAATAG+AGG | + | chr4_4:46623010-46623029 | None:intergenic | 30.0% | |
| CATGCAAGAATTGTATCTAA+TGG | + | chr4_4:46623071-46623090 | None:intergenic | 30.0% | |
| AAGCCAGACTTATACTTAAA+AGG | + | chr4_4:46623140-46623159 | None:intergenic | 30.0% | |
| TATCGATCTTTCTCCTCAAT+CGG | - | chr4_4:46620577-46620596 | Msa0683730:three_prime_UTR | 35.0% | |
| ! | AAGTTAGCTCTTCTGAAGAA+TGG | - | chr4_4:46620692-46620711 | Msa0683730:CDS | 35.0% |
| ! | TTAGAAGAATCAGAGTACCT+CGG | + | chr4_4:46620728-46620747 | None:intergenic | 35.0% |
| AAGGTTGCTTATGTTCTTCA+AGG | - | chr4_4:46620746-46620765 | Msa0683730:CDS | 35.0% | |
| TTATGTTGATCCCTCAATTG+GGG | - | chr4_4:46620858-46620877 | Msa0683730:intron | 35.0% | |
| ! | ACGTCTTCAATCAAAAGTGT+CGG | + | chr4_4:46620926-46620945 | None:intergenic | 35.0% |
| !! | AGTTGAAACGGTTTTGTGTT+TGG | - | chr4_4:46621106-46621125 | Msa0683730:intron | 35.0% |
| CATGAGAAAAGCTATACCAA+AGG | - | chr4_4:46621306-46621325 | Msa0683730:CDS | 35.0% | |
| !! | TAGTGAGGATTTGTTGATAC+AGG | - | chr4_4:46621566-46621585 | Msa0683730:CDS | 35.0% |
| ! | ACAACCTTTTCTTCTGATTC+AGG | + | chr4_4:46621617-46621636 | None:intergenic | 35.0% |
| AAAGGTTGTTGCAATTAAGG+AGG | - | chr4_4:46621628-46621647 | Msa0683730:CDS | 35.0% | |
| AAGGTTGTTGCAATTAAGGA+GGG | - | chr4_4:46621629-46621648 | Msa0683730:CDS | 35.0% | |
| ! | TGGATTTTCAACTGAGTTTG+TGG | - | chr4_4:46621805-46621824 | Msa0683730:CDS | 35.0% |
| ! | GGATTTTCAACTGAGTTTGT+GGG | - | chr4_4:46621806-46621825 | Msa0683730:CDS | 35.0% |
| AACAATGTGAAGACACTTGT+TGG | - | chr4_4:46621851-46621870 | Msa0683730:CDS | 35.0% | |
| TGCAGGTTACTTACATTGTT+AGG | - | chr4_4:46622128-46622147 | Msa0683730:intron | 35.0% | |
| GCAGGTTACTTACATTGTTA+GGG | - | chr4_4:46622129-46622148 | Msa0683730:intron | 35.0% | |
| CAGGTTACTTACATTGTTAG+GGG | - | chr4_4:46622130-46622149 | Msa0683730:intron | 35.0% | |
| TTCGAAACAACGAAAAACCT+CGG | + | chr4_4:46622238-46622257 | None:intergenic | 35.0% | |
| TAGACAGATAATGAGTGCAT+CGG | + | chr4_4:46622405-46622424 | None:intergenic | 35.0% | |
| AAGGAATTGATTGCCTCAAT+TGG | - | chr4_4:46622971-46622990 | Msa0683730:five_prime_UTR | 35.0% | |
| !!! | TGATTGCCTCAATTGGTTTT+AGG | - | chr4_4:46622978-46622997 | Msa0683730:five_prime_UTR | 35.0% |
| !!! | GATTGCCTCAATTGGTTTTA+GGG | - | chr4_4:46622979-46622998 | Msa0683730:five_prime_UTR | 35.0% |
| !!! | ATTGCCTCAATTGGTTTTAG+GGG | - | chr4_4:46622980-46622999 | Msa0683730:five_prime_UTR | 35.0% |
| ATGTTACCTTGACGCAACAT+AGG | + | chr4_4:46620662-46620681 | None:intergenic | 40.0% | |
| ATGTTGCGTCAAGGTAACAT+TGG | - | chr4_4:46620662-46620681 | Msa0683730:CDS | 40.0% | |
| ! | GAGGTACTCTGATTCTTCTA+AGG | - | chr4_4:46620727-46620746 | Msa0683730:CDS | 40.0% |
| GCTATCATAACCCCAATTGA+GGG | + | chr4_4:46620871-46620890 | None:intergenic | 40.0% | |
| TGCTATCATAACCCCAATTG+AGG | + | chr4_4:46620872-46620891 | None:intergenic | 40.0% | |
| !! | AATCAAAAGTGTCGGTGCTA+CGG | + | chr4_4:46620918-46620937 | None:intergenic | 40.0% |
| ! | CATGCATATTTAGAGCCCTT+TGG | + | chr4_4:46621325-46621344 | None:intergenic | 40.0% |
| !! | GGATTTGTTGATACAGGAAG+TGG | - | chr4_4:46621572-46621591 | Msa0683730:CDS | 40.0% |
| GCTACCTGAATCAGAAGAAA+AGG | - | chr4_4:46621610-46621629 | Msa0683730:CDS | 40.0% | |
| ! | CGATACTTCAAAAGCACACA+AGG | - | chr4_4:46621733-46621752 | Msa0683730:CDS | 40.0% |
| !! | TTTTTCCTGACTGGTCCTAA+TGG | - | chr4_4:46621773-46621792 | Msa0683730:CDS | 40.0% |
| GGTCCTAATGGAATCTTTAC+TGG | - | chr4_4:46621785-46621804 | Msa0683730:CDS | 40.0% | |
| TTTCAACTGAGTTTGTGGGA+AGG | - | chr4_4:46621810-46621829 | Msa0683730:CDS | 40.0% | |
| TTCAACTGAGTTTGTGGGAA+GGG | - | chr4_4:46621811-46621830 | Msa0683730:CDS | 40.0% | |
| ATCAAGCTTCACAATCCCTT+TGG | + | chr4_4:46621888-46621907 | None:intergenic | 40.0% | |
| AAAGGGATTGTGAAGCTTGA+TGG | - | chr4_4:46621887-46621906 | Msa0683730:CDS | 40.0% | |
| CCTTTCTTGTGTTCCTCTTT+AGG | + | chr4_4:46621932-46621951 | None:intergenic | 40.0% | |
| CCTAAAGAGGAACACAAGAA+AGG | - | chr4_4:46621929-46621948 | Msa0683730:intron | 40.0% | |
| ACTTACATTGTTAGGGGAAG+TGG | - | chr4_4:46622136-46622155 | Msa0683730:intron | 40.0% | |
| !! | TGTTGATGGTAAGAGAGTCT+TGG | - | chr4_4:46622177-46622196 | Msa0683730:intron | 40.0% |
| ! | GAGATTTGTTCATTGTACCG+AGG | - | chr4_4:46622218-46622237 | Msa0683730:intron | 40.0% |
| TCGAAGATTGCTGACAATGA+TGG | - | chr4_4:46622253-46622272 | Msa0683730:intron | 40.0% | |
| ! | GATTGCTGACAATGATGGAA+TGG | - | chr4_4:46622258-46622277 | Msa0683730:intron | 40.0% |
| CCTTGATATTACAAGGCTAG+TGG | + | chr4_4:46622622-46622641 | None:intergenic | 40.0% | |
| !! | CCACTAGCCTTGTAATATCA+AGG | - | chr4_4:46622619-46622638 | Msa0683730:intron | 40.0% |
| CAGTCCTGTATTTACACACA+TGG | - | chr4_4:46622712-46622731 | Msa0683730:intron | 40.0% | |
| ! | AGAAGCTTTTCCGTTCAAAG+AGG | - | chr4_4:46622810-46622829 | Msa0683730:CDS | 40.0% |
| ATTTGGAGGAGGGAAGAAAA+TGG | + | chr4_4:46622846-46622865 | None:intergenic | 40.0% | |
| TAAGCCCCTAAAACCAATTG+AGG | + | chr4_4:46622987-46623006 | None:intergenic | 40.0% | |
| ! | GCTTTTCAGTGCATGTGGTT+AGG | + | chr4_4:46620485-46620504 | None:intergenic | 45.0% |
| ! | GATGTGCTTTTCAGTGCATG+TGG | + | chr4_4:46620490-46620509 | None:intergenic | 45.0% |
| ! | TACACTTTCTTCGCCGATTG+AGG | + | chr4_4:46620593-46620612 | None:intergenic | 45.0% |
| ! | CAATCGGCGAAGAAAGTGTA+CGG | - | chr4_4:46620593-46620612 | Msa0683730:three_prime_UTR | 45.0% |
| ! | AAGAAAGTGTACGGTGGTGA+TGG | - | chr4_4:46620602-46620621 | Msa0683730:three_prime_UTR | 45.0% |
| !! | ATGGTGGATCGTACTATGCT+TGG | - | chr4_4:46620621-46620640 | Msa0683730:exon | 45.0% |
| !!! | AGAATGGTTTTGCTGTTCCG+AGG | - | chr4_4:46620708-46620727 | Msa0683730:CDS | 45.0% |
| ACCATGTCACAACACCAAAG+GGG | + | chr4_4:46621670-46621689 | None:intergenic | 45.0% | |
| CACCATGTCACAACACCAAA+GGG | + | chr4_4:46621671-46621690 | None:intergenic | 45.0% | |
| GACATGGTGGTACAACAAAG+AGG | - | chr4_4:46621682-46621701 | Msa0683730:CDS | 45.0% | |
| CAACAAAGAGGACACTGAGT+TGG | - | chr4_4:46621694-46621713 | Msa0683730:CDS | 45.0% | |
| ! | GAGTTGGTTGTTCTGTTCCT+CGG | - | chr4_4:46621710-46621729 | Msa0683730:CDS | 45.0% |
| ! | ACTTCAAAAGCACACAAGGC+TGG | - | chr4_4:46621737-46621756 | Msa0683730:CDS | 45.0% |
| AGATTCCATTAGGACCAGTC+AGG | + | chr4_4:46621781-46621800 | None:intergenic | 45.0% | |
| TTGGAAAGCAATCCGCCAAA+GGG | - | chr4_4:46621870-46621889 | Msa0683730:CDS | 45.0% | |
| AAGCTTCACAATCCCTTTGG+CGG | + | chr4_4:46621885-46621904 | None:intergenic | 45.0% | |
| TTGTGTTCCTCTTTAGGCTC+AGG | + | chr4_4:46621926-46621945 | None:intergenic | 45.0% | |
| AGAGGAACACAAGAAAGGCA+TGG | - | chr4_4:46621934-46621953 | Msa0683730:intron | 45.0% | |
| !! | AGGCATGGCTTTGAACTGTT+TGG | - | chr4_4:46621949-46621968 | Msa0683730:intron | 45.0% |
| !! | CATGGCTTTGAACTGTTTGG+AGG | - | chr4_4:46621952-46621971 | Msa0683730:intron | 45.0% |
| GAACACCAAGAACCTTCCTT+TGG | - | chr4_4:46622021-46622040 | Msa0683730:intron | 45.0% | |
| ACCAAGAACCTTCCTTTGGT+TGG | - | chr4_4:46622025-46622044 | Msa0683730:intron | 45.0% | |
| ACCAACCAAAGGAAGGTTCT+TGG | + | chr4_4:46622029-46622048 | None:intergenic | 45.0% | |
| AAACCAACCTCACCAACCAA+AGG | + | chr4_4:46622040-46622059 | None:intergenic | 45.0% | |
| !! | TTGGTTGGTGAGGTTGGTTT+AGG | - | chr4_4:46622040-46622059 | Msa0683730:intron | 45.0% |
| GTTTAGGAGCTGATCTTGTG+AGG | - | chr4_4:46622056-46622075 | Msa0683730:intron | 45.0% | |
| GCTGATCTTGTGAGGATTGA+TGG | - | chr4_4:46622064-46622083 | Msa0683730:intron | 45.0% | |
| GCAGAATCACAAGAGAATCC+AGG | + | chr4_4:46622106-46622125 | None:intergenic | 45.0% | |
| CTCTTGTGATTCTGCTTTGC+AGG | - | chr4_4:46622111-46622130 | Msa0683730:intron | 45.0% | |
| CAACACCAACAACCTGAACA+CGG | + | chr4_4:46622162-46622181 | None:intergenic | 45.0% | |
| !! | GTTCAGGTTGTTGGTGTTGA+TGG | - | chr4_4:46622163-46622182 | Msa0683730:intron | 45.0% |
| AGTCTTGGAGACCACTTTGA+AGG | - | chr4_4:46622192-46622211 | Msa0683730:intron | 45.0% | |
| CAAATCTCCAGCCTTCAAAG+TGG | + | chr4_4:46622206-46622225 | None:intergenic | 45.0% | |
| ! | CTGACAATGATGGAATGGAG+TGG | - | chr4_4:46622263-46622282 | Msa0683730:intron | 45.0% |
| CCAGCCATGTGTGTAAATAC+AGG | + | chr4_4:46622719-46622738 | None:intergenic | 45.0% | |
| CCTGTATTTACACACATGGC+TGG | - | chr4_4:46622716-46622735 | Msa0683730:intron | 45.0% | |
| ACACATGGCTGGAAGTTCTT+CGG | - | chr4_4:46622727-46622746 | Msa0683730:intron | 45.0% | |
| CGGAAAAGCTTCTCAACTTC+TGG | + | chr4_4:46622803-46622822 | None:intergenic | 45.0% | |
| CATCAGCAGTCCTCTTTGAA+CGG | + | chr4_4:46622823-46622842 | None:intergenic | 45.0% | |
| !! | AAAGTGTACGGTGGTGATGG+TGG | - | chr4_4:46620605-46620624 | Msa0683730:three_prime_UTR | 50.0% |
| CGCAACATAGGAAGCTCAGA+AGG | + | chr4_4:46620650-46620669 | None:intergenic | 50.0% | |
| GAGCTTCCTATGTTGCGTCA+AGG | - | chr4_4:46620653-46620672 | Msa0683730:CDS | 50.0% | |
| GATACAGGAAGTGGAGTTGC+TGG | - | chr4_4:46621581-46621600 | Msa0683730:CDS | 50.0% | |
| GATGCTTTAGCACTCCCCTT+TGG | - | chr4_4:46621653-46621672 | Msa0683730:CDS | 50.0% | |
| !! | TCCCCTTTGGTGTTGTGACA+TGG | - | chr4_4:46621666-46621685 | Msa0683730:CDS | 50.0% |
| CCACCATGTCACAACACCAA+AGG | + | chr4_4:46621672-46621691 | None:intergenic | 50.0% | |
| !! | CCTTTGGTGTTGTGACATGG+TGG | - | chr4_4:46621669-46621688 | Msa0683730:CDS | 50.0% |
| !!! | GTGCTTTTGAAGTATCGCCG+AGG | + | chr4_4:46621730-46621749 | None:intergenic | 50.0% |
| TGAGTTTGTGGGAAGGGCTT+GGG | - | chr4_4:46621817-46621836 | Msa0683730:CDS | 50.0% | |
| GTTGGAAAGCAATCCGCCAA+AGG | - | chr4_4:46621869-46621888 | Msa0683730:CDS | 50.0% | |
| GTTCCTCTTTAGGCTCAGGA+AGG | + | chr4_4:46621922-46621941 | None:intergenic | 50.0% | |
| !! | GAACTGTTTGGAGGCACCAT+TGG | - | chr4_4:46621961-46621980 | Msa0683730:intron | 50.0% |
| ! | GAACCTTCCTTTGGTTGGTG+AGG | - | chr4_4:46622030-46622049 | Msa0683730:intron | 50.0% |
| CAACCTCACCAACCAAAGGA+AGG | + | chr4_4:46622036-46622055 | None:intergenic | 50.0% | |
| !! | CTTCCTTTGGTTGGTGAGGT+TGG | - | chr4_4:46622034-46622053 | Msa0683730:intron | 50.0% |
| ! | AGAGAATCCAGGAGAGCACA+TGG | + | chr4_4:46622095-46622114 | None:intergenic | 50.0% |
| ! | TTGGAGACCACTTTGAAGGC+TGG | - | chr4_4:46622196-46622215 | Msa0683730:intron | 50.0% |
| ! | TGGAAGTTCTTCGGTGTGGA+AGG | - | chr4_4:46622736-46622755 | Msa0683730:intron | 50.0% |
| GCTATCACCTACAGTTCTGC+AGG | - | chr4_4:46622760-46622779 | Msa0683730:CDS | 50.0% | |
| AAAGCAGCCTGCAGAACTGT+AGG | + | chr4_4:46622770-46622789 | None:intergenic | 50.0% | |
| ! | TCGGCGAAGAAAGTGTACGG+TGG | - | chr4_4:46620596-46620615 | Msa0683730:three_prime_UTR | 55.0% |
| !! | GTGTCGGTGCTACGGAGAAT+AGG | + | chr4_4:46620910-46620929 | None:intergenic | 55.0% |
| CTGAGTTTGTGGGAAGGGCT+TGG | - | chr4_4:46621816-46621835 | Msa0683730:CDS | 55.0% | |
| CAGCCTTCCTGAGCCTAAAG+AGG | - | chr4_4:46621916-46621935 | Msa0683730:intron | 55.0% | |
| GGAAGATCCATGTGCTCTCC+TGG | - | chr4_4:46622085-46622104 | Msa0683730:intron | 55.0% | |
| !! | AGTGGCCGTGTTCAGGTTGT+TGG | - | chr4_4:46622154-46622173 | Msa0683730:intron | 55.0% |
| TGGCTGGAAGTTCTTCGGTG+TGG | - | chr4_4:46622732-46622751 | Msa0683730:intron | 55.0% | |
| TGTGGGAAGGGCTTGGGACT+TGG | - | chr4_4:46621823-46621842 | Msa0683730:CDS | 60.0% | |
| TAGGGGAAGTGGCCGTGTTC+AGG | - | chr4_4:46622147-46622166 | Msa0683730:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 46620329 | 46623175 | 46620329 | ID=Msa0683730;Name=Msa0683730 |
| chr4_4 | mRNA | 46620329 | 46623175 | 46620329 | ID=Msa0683730-mRNA-1;Parent=Msa0683730;Name=Msa0683730-mRNA-1;_AED=0.03;_eAED=0.03;_QI=243|1|1|1|1|1|3|307|356 |
| chr4_4 | exon | 46620329 | 46620789 | 46620329 | ID=Msa0683730-mRNA-1:exon:11495;Parent=Msa0683730-mRNA-1 |
| chr4_4 | exon | 46621196 | 46621916 | 46621196 | ID=Msa0683730-mRNA-1:exon:11494;Parent=Msa0683730-mRNA-1 |
| chr4_4 | exon | 46622737 | 46623175 | 46622737 | ID=Msa0683730-mRNA-1:exon:11493;Parent=Msa0683730-mRNA-1 |
| chr4_4 | five_prime_UTR | 46622933 | 46623175 | 46622933 | ID=Msa0683730-mRNA-1:five_prime_utr;Parent=Msa0683730-mRNA-1 |
| chr4_4 | CDS | 46622737 | 46622932 | 46622737 | ID=Msa0683730-mRNA-1:cds;Parent=Msa0683730-mRNA-1 |
| chr4_4 | CDS | 46621196 | 46621916 | 46621196 | ID=Msa0683730-mRNA-1:cds;Parent=Msa0683730-mRNA-1 |
| chr4_4 | CDS | 46620636 | 46620789 | 46620636 | ID=Msa0683730-mRNA-1:cds;Parent=Msa0683730-mRNA-1 |
| chr4_4 | three_prime_UTR | 46620329 | 46620635 | 46620329 | ID=Msa0683730-mRNA-1:three_prime_utr;Parent=Msa0683730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
