AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0317210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0317210 MtrunA17_Chr2g0290351 90.258 698 16 3 1 646 1 698 0.0 1276
Msa0317210 MtrunA17_Chr3g0101951 42.251 542 248 14 7 491 14 547 1.27e-126 390
Msa0317210 MtrunA17_Chr5g0423001 29.146 398 181 11 142 493 58 400 2.01e-38 149
Msa0317210 MtrunA17_Chr2g0293961 35.211 142 82 4 348 483 250 387 2.19e-12 69.3
Msa0317210 MtrunA17_Chr5g0423021 33.333 78 48 1 10 87 23 96 1.72e-11 61.6
Msa0317210 MtrunA17_Chr1g0192931 29.927 137 92 3 348 483 51 184 4.74e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0317210 AT5G55600.2 38.919 555 258 13 5 495 3 540 3.76e-114 357
Msa0317210 AT5G55600.1 38.919 555 258 13 5 495 3 540 3.76e-114 357
Msa0317210 AT5G55600.3 38.919 555 258 13 5 495 3 540 3.76e-114 357
Msa0317210 AT1G68580.2 29.350 569 341 14 10 530 10 565 1.77e-63 223
Msa0317210 AT1G68580.4 30.210 523 311 13 10 491 10 519 8.28e-62 215
Msa0317210 AT1G68580.3 32.854 417 248 8 142 530 57 469 5.46e-60 211
Msa0317210 AT1G68580.5 32.854 417 248 8 142 530 107 519 1.53e-59 211
Msa0317210 AT1G68580.1 34.501 371 218 7 142 491 57 423 1.32e-58 204

Find 186 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTATCATTGACCTTAAA+AGG 0.202223 2_4:+14801372 None:intergenic
CGGACAGTCCGCCATTCTTT+TGG 0.206681 2_4:+14801596 None:intergenic
TCATTCATTTGTGTATATTA+TGG 0.207594 2_4:-14802000 Msa0317210:CDS
TAACATGTGGGTTAATATAT+TGG 0.208099 2_4:-14800276 Msa0317210:CDS
CGCCCTCCTGAATCTGTTAA+AGG 0.213743 2_4:-14800722 Msa0317210:CDS
CTACTAACGTTGTTTATAAA+TGG 0.214973 2_4:-14804886 Msa0317210:CDS
CATCTGGGTCGTTGTGGTTT+TGG 0.216394 2_4:-14805293 Msa0317210:five_prime_UTR
AGAGGACAGCGAGGAGAATT+TGG 0.231136 2_4:-14799856 Msa0317210:CDS
AGTAACCAGCCTATACTTTC+TGG 0.267064 2_4:-14801639 Msa0317210:CDS
GTACAACCTTTAACAGATTC+AGG 0.267647 2_4:+14800716 None:intergenic
GCTCCTGCTGCATCAAGTTT+TGG 0.267891 2_4:+14799804 None:intergenic
TGGTTCTATACCAGTTTATC+AGG 0.278923 2_4:+14802612 None:intergenic
GCTGTTGATGCTTCTGAAAA+TGG 0.280834 2_4:-14800629 Msa0317210:CDS
CTGAGATCCATGTATGTTCT+AGG 0.288673 2_4:-14801716 Msa0317210:CDS
TTCCTAAACCAACCCTAAAT+TGG 0.291254 2_4:+14805206 None:intergenic
TTCCCACCATCTTCAAATTT+CGG 0.300490 2_4:+14801576 None:intergenic
TCTGGTTTGGAAGAACTTAA+TGG 0.303372 2_4:-14800086 Msa0317210:CDS
AAAGGAGAGTTTGAAGAAAA+TGG 0.310827 2_4:+14805596 None:intergenic
CACCAATTTAGGGTTGGTTT+AGG 0.328851 2_4:-14805208 Msa0317210:five_prime_UTR
ACTTCTATTCCTCTTATTGC+TGG 0.341426 2_4:+14801527 None:intergenic
TAGCTTGAAACTTGGGGCGG+GGG 0.346760 2_4:+14800216 None:intergenic
AGTGGCAAAACCTGACAAAC+TGG 0.351438 2_4:-14800780 Msa0317210:CDS
AGCTTGAAACTTGGGGCGGG+GGG 0.355476 2_4:+14800217 None:intergenic
TTTCATCACACCTAATGTTC+AGG 0.361881 2_4:-14801832 Msa0317210:CDS
TCCACAACATAAACATCATA+TGG 0.362397 2_4:-14805497 Msa0317210:five_prime_UTR
ATCGACTCTGGTGGCTTTGA+TGG 0.362743 2_4:-14800002 Msa0317210:CDS
AGTTTCAGACTCGGGTATTT+CGG 0.362958 2_4:+14801447 None:intergenic
ATGCCTGGTGTGGGGATGGA+TGG 0.370592 2_4:-14800670 Msa0317210:CDS
GATTCGGTGCTAGCTGTTGT+GGG 0.371308 2_4:-14804974 Msa0317210:CDS
TGTTGACTGGCTCAACCATT+TGG 0.374513 2_4:-14804846 Msa0317210:CDS
AAACAACAAAACAAGGATTA+AGG 0.374788 2_4:+14805456 None:intergenic
TTCAGCAAATGCTGCAGGAC+TGG 0.376226 2_4:-14802685 Msa0317210:CDS
AAAGGTTGTACTTTCGAGAT+TGG 0.378680 2_4:-14800704 Msa0317210:CDS
TTGACCTTAAAAGGCAGTTC+AGG 0.379130 2_4:+14801381 None:intergenic
AACATGTGGGTTAATATATT+GGG 0.382749 2_4:-14800275 Msa0317210:CDS
ATATCTGAACTTTGAATGTT+CGG 0.390684 2_4:+14802488 None:intergenic
CACCGCATACCCAGTTTGTC+AGG 0.392151 2_4:+14800770 None:intergenic
TCTCAAGATAGTGGCATTAG+AGG 0.393901 2_4:-14801339 Msa0317210:CDS
GCACTGATCACCTGAACATT+AGG 0.397724 2_4:+14801822 None:intergenic
CAGCTGTGGATGCCTGGTGT+GGG 0.404079 2_4:-14800679 Msa0317210:CDS
ACCTGTCAGGTTTATTCGCC+TGG 0.412098 2_4:-14800605 Msa0317210:intron
CCTGGTGTGGGGATGGATGG+TGG 0.416330 2_4:-14800667 Msa0317210:CDS
GGCTCAACCATTTGGTTTCG+AGG 0.417021 2_4:-14804838 Msa0317210:CDS
TTAAAAGGCAGTTCAGGCTT+AGG 0.419722 2_4:+14801387 None:intergenic
CTAGAATCAAATGGGGCAAA+AGG 0.421754 2_4:+14805339 None:intergenic
TTAGGAGTCAGAACTGTTGC+AGG 0.423318 2_4:+14801783 None:intergenic
TTGAAGGATTTAAGGATGTC+AGG 0.423670 2_4:-14805097 Msa0317210:exon
GGATTCGGTGCTAGCTGTTG+TGG 0.425224 2_4:-14804975 Msa0317210:CDS
GAACCCCACTTCACAAAACC+TGG 0.428520 2_4:-14805531 Msa0317210:five_prime_UTR
TTGTATTTCTCGTAATGCTT+AGG 0.431456 2_4:+14801765 None:intergenic
GTGGATGCCTGGTGTGGGGA+TGG 0.431806 2_4:-14800674 Msa0317210:CDS
GTCAAGAAATACAATGGGTA+AGG 0.435122 2_4:-14801418 Msa0317210:CDS
GGGTATTTCGGTACACCATT+TGG 0.436068 2_4:+14801459 None:intergenic
GGAGTACTCGGTAGCTGAAA+AGG 0.436611 2_4:-14801499 Msa0317210:CDS
AAATCACTATCTCGGTTACT+TGG 0.437572 2_4:-14801967 Msa0317210:CDS
TCCTTACACCAATTTAGGGT+TGG 0.438520 2_4:-14805214 Msa0317210:five_prime_UTR
GCTAATTCTGCAGTGGTCAA+TGG 0.443108 2_4:-14800197 Msa0317210:CDS
TCAGCAAATGCTGCAGGACT+GGG 0.449382 2_4:-14802684 Msa0317210:CDS
CCCTATTCTTCCCAAAAGAA+TGG 0.449707 2_4:-14801607 Msa0317210:CDS
TTCTGAAAATGGAACCTGTC+AGG 0.449817 2_4:-14800618 Msa0317210:CDS
GCTTGAAACTTGGGGCGGGG+GGG 0.450862 2_4:+14800218 None:intergenic
ATCAAACAAAATTACCATTA+CGG 0.457769 2_4:+14804804 None:intergenic
TCACTCAAGATGATCCTTTG+AGG 0.458314 2_4:-14801551 Msa0317210:CDS
CCCTCATGAAGATCAAGCTC+TGG 0.461208 2_4:+14801861 None:intergenic
TTCTCTGACAGGTACACTGC+TGG 0.462184 2_4:-14802712 Msa0317210:intron
TGATGCAGCAGGAGCAATAC+AGG 0.466863 2_4:-14799796 Msa0317210:intron
ACCTTCGGATTTCCCAAGAC+TGG 0.467234 2_4:-14800304 Msa0317210:CDS
TTATAAATGGAGGGCAAGGA+GGG 0.470720 2_4:-14804873 Msa0317210:CDS
TTAGCTTGAAACTTGGGGCG+GGG 0.472188 2_4:+14800215 None:intergenic
CATGTTATCAATCCAGTCTT+GGG 0.476256 2_4:+14800292 None:intergenic
GCAGCTGTGGATGCCTGGTG+TGG 0.478486 2_4:-14800680 Msa0317210:CDS
ACATGTTATCAATCCAGTCT+TGG 0.478789 2_4:+14800291 None:intergenic
TGCAGAATTAGCTTGAAACT+TGG 0.478885 2_4:+14800208 None:intergenic
AAAGACAAGGATTGTAACTC+TGG 0.481296 2_4:-14799942 Msa0317210:CDS
TTTGCTGTTGGTAGCGGTGG+TGG 0.481424 2_4:-14805123 Msa0317210:five_prime_UTR
TTGGAGCAGCTGTGGATGCC+TGG 0.482162 2_4:-14800685 Msa0317210:CDS
ACCAACCCTAAATTGGTGTA+AGG 0.482492 2_4:+14805213 None:intergenic
GCAGAATTAGCTTGAAACTT+GGG 0.486363 2_4:+14800209 None:intergenic
GCAACTTCAACTTTAGCGAT+TGG 0.490850 2_4:+14800131 None:intergenic
TAAGCTGCCTAGAACATACA+TGG 0.491541 2_4:+14801709 None:intergenic
ACGGTGGTTTCACCGTGGTC+AGG 0.498848 2_4:-14801901 Msa0317210:CDS
GATGTCCTCGTCTTCATGAA+TGG 0.501392 2_4:+14800022 None:intergenic
CTTTGAGGTCCAGCAATAAG+AGG 0.501940 2_4:-14801536 Msa0317210:CDS
AGGAATCTATCGCACCGTAA+TGG 0.504905 2_4:-14804818 Msa0317210:intron
CTCAGCTTAGTAAGTGCAAA+GGG 0.507557 2_4:+14801669 None:intergenic
CTGGTGTGGGGATGGATGGT+GGG 0.509149 2_4:-14800666 Msa0317210:CDS
TTTAAGGATGTCAGGTGATG+AGG 0.510759 2_4:-14805089 Msa0317210:exon
CTAACGTTGTTTATAAATGG+AGG 0.516838 2_4:-14804883 Msa0317210:CDS
TAAATGGAGGGCAAGGAGGG+AGG 0.518145 2_4:-14804870 Msa0317210:CDS
TGGCCGAAAAGAGAGACCTT+CGG 0.518772 2_4:-14800319 Msa0317210:CDS
GATGATTCAGCAAATGCTGC+AGG 0.521797 2_4:-14802690 Msa0317210:CDS
ACAAATAAATAAACAACGAT+GGG 0.522252 2_4:+14805180 None:intergenic
GCTTGATCTTCATGAGGGTG+AGG 0.522274 2_4:-14801856 Msa0317210:CDS
GAGTTTCTCTCTCAAGATAG+TGG 0.524873 2_4:-14801348 Msa0317210:CDS
ATCAGTGCTGAGTGCATCAA+TGG 0.524900 2_4:-14801807 Msa0317210:CDS
CAAGGAGGGAGGTTGTTGAC+TGG 0.527134 2_4:-14804859 Msa0317210:CDS
CAATTCAAACCAGAAAGTAT+AGG 0.528562 2_4:+14801630 None:intergenic
AACAAATAAATAAACAACGA+TGG 0.532291 2_4:+14805179 None:intergenic
TGTGTATATTATGGCTGAAG+AGG 0.534012 2_4:-14801991 Msa0317210:CDS
ACTTCAACTTTAGCGATTGG+TGG 0.534261 2_4:+14800134 None:intergenic
TAAAGTTGAAGTTGCTCCAA+AGG 0.536046 2_4:-14800123 Msa0317210:CDS
ATAGATTCCTCGAAACCAAA+TGG 0.540101 2_4:+14804831 None:intergenic
GGTTAATATATTGGGAAAGC+CGG 0.540636 2_4:-14800267 Msa0317210:CDS
AATGGATGAGAGAGAAAGAG+AGG 0.541936 2_4:+14805559 None:intergenic
CCACCATCCATCCCCACACC+AGG 0.544987 2_4:+14800667 None:intergenic
GTATGAAGAGAATGACTTTG+TGG 0.547437 2_4:-14800061 Msa0317210:CDS
AACCCCACTTCACAAAACCT+GGG 0.547741 2_4:-14805530 Msa0317210:five_prime_UTR
AAACTGTCAAGAAATACAAT+GGG 0.548990 2_4:-14801423 Msa0317210:CDS
ATTAGCTTGAAACTTGGGGC+GGG 0.549751 2_4:+14800214 None:intergenic
TGAAGTGGGGTTCAAGGCAA+TGG 0.550570 2_4:+14805541 None:intergenic
GAGTACTCGGTAGCTGAAAA+GGG 0.550745 2_4:-14801498 Msa0317210:CDS
GAAGACGAGGACATCGACTC+TGG 0.550759 2_4:-14800014 Msa0317210:CDS
TAGAAGTTCTGTGGAGTACT+CGG 0.551129 2_4:-14801511 Msa0317210:CDS
CTCTTATTGCTGGACCTCAA+AGG 0.552719 2_4:+14801537 None:intergenic
TAGAATCAAATGGGGCAAAA+GGG 0.555346 2_4:+14805340 None:intergenic
GAAGAGGAAAATCACTATCT+CGG 0.555716 2_4:-14801975 Msa0317210:CDS
TTTCGAGATTGGAGCAGCTG+TGG 0.556598 2_4:-14800693 Msa0317210:CDS
AAAACTGTCAAGAAATACAA+TGG 0.558350 2_4:-14801424 Msa0317210:CDS
CGAGGAGAATTTGGTGATGG+AGG 0.561975 2_4:-14799847 Msa0317210:CDS
TTTATAAATGGAGGGCAAGG+AGG 0.565218 2_4:-14804874 Msa0317210:CDS
AGCTGTGGATGCCTGGTGTG+GGG 0.568395 2_4:-14800678 Msa0317210:CDS
GACTGTCCGAAATTTGAAGA+TGG 0.568426 2_4:-14801582 Msa0317210:CDS
GAACCAAAACTTGATGCAGC+AGG 0.570105 2_4:-14799807 Msa0317210:CDS
TCATGAATGGCATGGAGTGG+TGG 0.570434 2_4:+14800035 None:intergenic
TGTCCGAAATTTGAAGATGG+TGG 0.572463 2_4:-14801579 Msa0317210:CDS
TCAAACCAGAAAGTATAGGC+TGG 0.573089 2_4:+14801634 None:intergenic
TCTTCTGATGAGATGCCAAA+TGG 0.573273 2_4:-14801474 Msa0317210:CDS
GTCCGAAATTTGAAGATGGT+GGG 0.574514 2_4:-14801578 Msa0317210:CDS
TAACGTTGTTTATAAATGGA+GGG 0.575354 2_4:-14804882 Msa0317210:CDS
GCCATATGATGTTTATGTTG+TGG 0.577993 2_4:+14805496 None:intergenic
CAGAATTAGCTTGAAACTTG+GGG 0.579815 2_4:+14800210 None:intergenic
TTGTTTATAAATGGAGGGCA+AGG 0.581384 2_4:-14804877 Msa0317210:CDS
TCCAGTCTTGGGAAATCCGA+AGG 0.584903 2_4:+14800303 None:intergenic
TTAACAGATTCAGGAGGGCG+TGG 0.585022 2_4:+14800725 None:intergenic
AAGTGATATGTCAAGAGCGT+GGG 0.585434 2_4:-14805036 Msa0317210:CDS
ACATATGCAGAGGATAATGA+TGG 0.586922 2_4:-14799667 Msa0317210:CDS
ACCAGGCGAATAAACCTGAC+AGG 0.587917 2_4:+14800604 None:intergenic
TCCAGAGCTTGATCTTCATG+AGG 0.590258 2_4:-14801862 Msa0317210:CDS
ATGGATCCCTGCACAAAGAG+TGG 0.592243 2_4:-14800798 Msa0317210:CDS
TACATGGATCTCAGATGAAG+AGG 0.592642 2_4:+14801725 None:intergenic
AATCAAATGGGGCAAAAGGG+TGG 0.592683 2_4:+14805343 None:intergenic
CCTCGTCTTCATGAATGGCA+TGG 0.593293 2_4:+14800027 None:intergenic
CAGCGAGGAGAATTTGGTGA+TGG 0.593565 2_4:-14799850 Msa0317210:CDS
AAGACTGGATTGATAACATG+TGG 0.594651 2_4:-14800289 Msa0317210:CDS
ATAGTGGCATTAGAGGATGC+TGG 0.595657 2_4:-14801332 Msa0317210:CDS
GGTAGTAGCAGTGATGATGA+TGG 0.595660 2_4:-14799921 Msa0317210:CDS
CAAAGGAAAACAACAAAACA+AGG 0.599427 2_4:+14805449 None:intergenic
TCAAGAAATACAATGGGTAA+GGG 0.605604 2_4:-14801417 Msa0317210:CDS
TAGCTGTTGTGGGGACTGAG+AGG 0.606373 2_4:-14804964 Msa0317210:CDS
TAAGAGGAATAGAAGTTCTG+TGG 0.608266 2_4:-14801520 Msa0317210:CDS
AACCTGACAAACTGGGTATG+CGG 0.612126 2_4:-14800772 Msa0317210:CDS
TCTCTTGATACGTTCGCAGA+TGG 0.613005 2_4:-14802660 Msa0317210:CDS
GCTCAGCTTAGTAAGTGCAA+AGG 0.620095 2_4:+14801668 None:intergenic
CAAGTGATATGTCAAGAGCG+TGG 0.624113 2_4:-14805037 Msa0317210:CDS
GTGGTCAATGGATCTATGAC+TGG 0.625673 2_4:-14800185 Msa0317210:CDS
ATTCGGTGCTAGCTGTTGTG+GGG 0.629390 2_4:-14804973 Msa0317210:CDS
GTGGCAAAACCTGACAAACT+GGG 0.629824 2_4:-14800779 Msa0317210:CDS
CCAGAGCTTGATCTTCATGA+GGG 0.630541 2_4:-14801861 Msa0317210:CDS
AAACTGGGTATGCGGTGTGA+CGG 0.631659 2_4:-14800764 Msa0317210:CDS
GTTTCAAGCTAATTCTGCAG+TGG 0.637616 2_4:-14800204 Msa0317210:CDS
AGAGAGAAACTATAGCGTCA+TGG 0.637683 2_4:+14805379 None:intergenic
TGCATCTCATAAGAAGCTCA+AGG 0.639988 2_4:-14801289 Msa0317210:intron
AACCTTTAACAGATTCAGGA+GGG 0.647433 2_4:+14800720 None:intergenic
TTTACTTGAGACATATGTCG+GGG 0.650312 2_4:-14804997 Msa0317210:CDS
GACGAGGACATCGACTCTGG+TGG 0.650694 2_4:-14800011 Msa0317210:CDS
TTTCAGTCTAGAATCAAATG+GGG 0.653321 2_4:+14805332 None:intergenic
TGTGGCACCATCAAAACCAA+AGG 0.657312 2_4:+14805432 None:intergenic
TAGTAGTAATACATATGCAG+AGG 0.657740 2_4:-14799677 Msa0317210:CDS
CAACCTTTAACAGATTCAGG+AGG 0.659968 2_4:+14800719 None:intergenic
CCATGCCATTCATGAAGACG+AGG 0.663027 2_4:-14800027 Msa0317210:CDS
TGATGCGTTTGATAAAGACA+AGG 0.663316 2_4:-14799955 Msa0317210:CDS
AATTAGCTTGAAACTTGGGG+CGG 0.666624 2_4:+14800213 None:intergenic
TGGGGACTGAGAGGAGTGTG+AGG 0.667261 2_4:-14804955 Msa0317210:CDS
TGATGCTGACAACACTAGAG+AGG 0.676671 2_4:-14799874 Msa0317210:CDS
AGACTGGATTGATAACATGT+GGG 0.679658 2_4:-14800288 Msa0317210:CDS
GGCGTGGTCGTACTAATAAG+CGG 0.679908 2_4:+14800741 None:intergenic
TATTCTTCCCAAAAGAATGG+CGG 0.682389 2_4:-14801604 Msa0317210:CDS
TCTTCATGAATGGCATGGAG+TGG 0.688507 2_4:+14800032 None:intergenic
CATGCTTGACTTCCTGACCA+CGG 0.697314 2_4:+14801889 None:intergenic
GGTTTGGAAGAACTTAATGG+CGG 0.697748 2_4:-14800083 Msa0317210:CDS
AGAAGTGAAGTCAAACAATG+TGG 0.698720 2_4:+14805414 None:intergenic
GATGATGGCTCTGACAATGA+CGG 0.699323 2_4:-14799906 Msa0317210:CDS
TTACTTGAGACATATGTCGG+GGG 0.716612 2_4:-14804996 Msa0317210:CDS
CAACACTAGAGAGGACAGCG+AGG 0.747101 2_4:-14799865 Msa0317210:CDS
TTTGCACTTACTAAGCTGAG+CGG 0.753729 2_4:-14801666 Msa0317210:CDS
AAAGTACGGTGGTTTCACCG+TGG 0.758266 2_4:-14801906 Msa0317210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTCTTCTAATTTAT+AGG - chr2_4:14803307-14803326 Msa0317210:intron 10.0%
!!! CATTGATTGTAAATAAAAAA+TGG + chr2_4:14801535-14801554 None:intergenic 15.0%
!! AAACAAGAAAGAAAAATATT+AGG + chr2_4:14801618-14801637 None:intergenic 15.0%
!!! AAGTTTAGCTTAATTTTATA+TGG - chr2_4:14802157-14802176 Msa0317210:intron 15.0%
!! AATTGTACATAAAATGATTT+GGG + chr2_4:14802407-14802426 None:intergenic 15.0%
!! AAATTGTACATAAAATGATT+TGG + chr2_4:14802408-14802427 None:intergenic 15.0%
!!! CTAAAATGTTTATTTTATCA+TGG + chr2_4:14804806-14804825 None:intergenic 15.0%
!!! AAAGATTGATTTTTTTCATC+TGG - chr2_4:14800022-14800041 Msa0317210:CDS 20.0%
!!! AAGATTGATTTTTTTCATCT+GGG - chr2_4:14800023-14800042 Msa0317210:CDS 20.0%
!!! TTTGAGTTTTAGGATTTTTT+GGG - chr2_4:14800076-14800095 Msa0317210:CDS 20.0%
!! ACAAATAAATAAACAACGAT+GGG + chr2_4:14800154-14800173 None:intergenic 20.0%
!! AACAAATAAATAAACAACGA+TGG + chr2_4:14800155-14800174 None:intergenic 20.0%
!! ATCAAACAAAATTACCATTA+CGG + chr2_4:14800530-14800549 None:intergenic 20.0%
!!! TTTAAAACCATGATGTAATT+AGG - chr2_4:14801018-14801037 Msa0317210:intron 20.0%
!! AATCTAGATTCACAATAAAT+CGG + chr2_4:14801814-14801833 None:intergenic 20.0%
!! ATAAATCAACAAAAGAAAAG+TGG + chr2_4:14801911-14801930 None:intergenic 20.0%
!! AATGAAAAGAAGAAAATAAC+AGG + chr2_4:14802130-14802149 None:intergenic 20.0%
!!! GTTATTTTCTTCTTTTCATT+TGG - chr2_4:14802130-14802149 Msa0317210:intron 20.0%
!! ACAAAAGTAAAGACAATTAA+AGG - chr2_4:14802435-14802454 Msa0317210:intron 20.0%
!! AAACAGTTTACATACATATA+TGG + chr2_4:14802943-14802962 None:intergenic 20.0%
!! AGTAAGCTAAAAATAACTTA+TGG - chr2_4:14803142-14803161 Msa0317210:intron 20.0%
!! ATAAAAGTCAATGATAACAA+GGG + chr2_4:14803258-14803277 None:intergenic 20.0%
!! AATAAAAGTCAATGATAACA+AGG + chr2_4:14803259-14803278 None:intergenic 20.0%
!!! TTGTTATCATTGACTTTTAT+TGG - chr2_4:14803258-14803277 Msa0317210:intron 20.0%
!! TCATTCATTTGTGTATATTA+TGG - chr2_4:14803331-14803350 Msa0317210:intron 20.0%
!! AAGACAAAAAGAAACAAAAA+AGG - chr2_4:14803399-14803418 Msa0317210:intron 20.0%
!! AGACAAAAAGAAACAAAAAA+GGG - chr2_4:14803400-14803419 Msa0317210:intron 20.0%
!! AAACAAATCATTTACACTAA+CGG + chr2_4:14804277-14804296 None:intergenic 20.0%
!! TAAATTATATATCTATTGGC+TGG - chr2_4:14804423-14804442 Msa0317210:intron 20.0%
!!! AAATTATATATCTATTGGCT+GGG - chr2_4:14804424-14804443 Msa0317210:intron 20.0%
!! ACAAGTATAAATAATGATTG+CGG - chr2_4:14804458-14804477 Msa0317210:intron 20.0%
!!! TGTTTATTTTATCATGGAAA+TGG + chr2_4:14804800-14804819 None:intergenic 20.0%
!! AATATATGGTAAAGGTAAAT+GGG - chr2_4:14805565-14805584 Msa0317210:five_prime_UTR 20.0%
!! ATTACGTATATATAATCAGT+AGG + chr2_4:14805605-14805624 None:intergenic 20.0%
!! TAATAATGAAATGAAACTTC+AGG - chr2_4:14805630-14805649 Msa0317210:five_prime_UTR 20.0%
!! AATAATGAAATGAAACTTCA+GGG - chr2_4:14805631-14805650 Msa0317210:five_prime_UTR 20.0%
! AAACAACAAAACAAGGATTA+AGG + chr2_4:14799878-14799897 None:intergenic 25.0%
!!! TTTTCAGTCTAGAATCAAAT+GGG + chr2_4:14800003-14800022 None:intergenic 25.0%
!!! TTTTTCAGTCTAGAATCAAA+TGG + chr2_4:14800004-14800023 None:intergenic 25.0%
!!! GTTTGAGTTTTAGGATTTTT+TGG - chr2_4:14800075-14800094 Msa0317210:CDS 25.0%
!! TTTTTCCTTACACCAATTTA+GGG - chr2_4:14800113-14800132 Msa0317210:CDS 25.0%
! TCAAGTAAAAATGAATCACA+CGG + chr2_4:14800323-14800342 None:intergenic 25.0%
!! TTTTTACTTGAGACATATGT+CGG - chr2_4:14800332-14800351 Msa0317210:CDS 25.0%
! TAATCCATCAAAAATTGTTG+AGG + chr2_4:14800420-14800439 None:intergenic 25.0%
!!! CAACAATTTTTGATGGATTA+TGG - chr2_4:14800420-14800439 Msa0317210:intron 25.0%
! CTACTAACGTTGTTTATAAA+TGG - chr2_4:14800445-14800464 Msa0317210:intron 25.0%
! TAACGTTGTTTATAAATGGA+GGG - chr2_4:14800449-14800468 Msa0317210:intron 25.0%
! TTTGTATGAGTTATTGTTTG+TGG - chr2_4:14800588-14800607 Msa0317210:intron 25.0%
!!! TATGTGGTGAATTGTTTTAT+TGG - chr2_4:14800620-14800639 Msa0317210:CDS 25.0%
!!! GAATTGTTTTATTGGATGAA+TGG - chr2_4:14800628-14800647 Msa0317210:CDS 25.0%
! TTTATTGGATGAATGGTTAT+TGG - chr2_4:14800635-14800654 Msa0317210:CDS 25.0%
! TTCATGATCACTTATATTGT+TGG - chr2_4:14800832-14800851 Msa0317210:intron 25.0%
!! TATATTGTTGGTTAATGCAA+AGG - chr2_4:14800844-14800863 Msa0317210:intron 25.0%
! TAGAAAATTGTGAACAAATG+AGG - chr2_4:14800909-14800928 Msa0317210:intron 25.0%
!!! TACATCATGGTTTTAAATTG+TGG + chr2_4:14801015-14801034 None:intergenic 25.0%
!! AGTAAATAGTTTGTATGACT+TGG + chr2_4:14801127-14801146 None:intergenic 25.0%
! AGATTGGACTATTATTCTTT+GGG + chr2_4:14801158-14801177 None:intergenic 25.0%
! AAGATTGGACTATTATTCTT+TGG + chr2_4:14801159-14801178 None:intergenic 25.0%
!! TTCTCAATGTAATGTGTTTT+CGG + chr2_4:14801286-14801305 None:intergenic 25.0%
! TACAATCAATGCATTAAACA+TGG - chr2_4:14801544-14801563 Msa0317210:CDS 25.0%
!!! ATGTTTATCGATTTTGGATA+TGG - chr2_4:14801773-14801792 Msa0317210:CDS 25.0%
! ATCTAGATTCACAATAAATC+GGG + chr2_4:14801813-14801832 None:intergenic 25.0%
!!! ATGTAGTCAACTGTTTTTTA+TGG - chr2_4:14801867-14801886 Msa0317210:CDS 25.0%
!!! TTTTTTACTACTACCATACA+TGG + chr2_4:14802022-14802041 None:intergenic 25.0%
! ATTATTTGCCAATTGATCAA+AGG + chr2_4:14802205-14802224 None:intergenic 25.0%
! GTTCTATCATAAACCATATT+TGG + chr2_4:14802252-14802271 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr2_4:14802256-14802275 Msa0317210:intron 25.0%
! AAGTAAAGACAATTAAAGGA+AGG - chr2_4:14802439-14802458 Msa0317210:intron 25.0%
!!! AGATGGATTTTAATAGTCAT+TGG + chr2_4:14802742-14802761 None:intergenic 25.0%
! CATGTCATATAAAGATACAA+AGG + chr2_4:14802776-14802795 None:intergenic 25.0%
! ATATCTGAACTTTGAATGTT+CGG + chr2_4:14802846-14802865 None:intergenic 25.0%
! TTCAAAGTTCAGATATTGTA+TGG - chr2_4:14802850-14802869 Msa0317210:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr2_4:14803007-14803026 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr2_4:14803008-14803027 None:intergenic 25.0%
! AAAACTGTCAAGAAATACAA+TGG - chr2_4:14803907-14803926 Msa0317210:intron 25.0%
! AAACTGTCAAGAAATACAAT+GGG - chr2_4:14803908-14803927 Msa0317210:intron 25.0%
! CAAGTATAAATAATGATTGC+GGG - chr2_4:14804459-14804478 Msa0317210:intron 25.0%
!!! AACCTGTTATTAATTTGTGT+AGG - chr2_4:14804509-14804528 Msa0317210:intron 25.0%
! TTCCTACACAAATTAATAAC+AGG + chr2_4:14804514-14804533 None:intergenic 25.0%
!!! GTTATTAATTTGTGTAGGAA+TGG - chr2_4:14804514-14804533 Msa0317210:intron 25.0%
! GAAAAATTGTTCATTGTTTC+TGG - chr2_4:14804879-14804898 Msa0317210:CDS 25.0%
!! ACACACATAATGTTTTTCTT+TGG - chr2_4:14804937-14804956 Msa0317210:CDS 25.0%
!! CACACATAATGTTTTTCTTT+GGG - chr2_4:14804938-14804957 Msa0317210:CDS 25.0%
!! TAACATGTGGGTTAATATAT+TGG - chr2_4:14805055-14805074 Msa0317210:CDS 25.0%
!! AACATGTGGGTTAATATATT+GGG - chr2_4:14805056-14805075 Msa0317210:CDS 25.0%
! ATACAGGTTACATGAATATA+TGG - chr2_4:14805551-14805570 Msa0317210:five_prime_UTR 25.0%
! GTTACATGAATATATGGTAA+AGG - chr2_4:14805557-14805576 Msa0317210:five_prime_UTR 25.0%
! GAATATATGGTAAAGGTAAA+TGG - chr2_4:14805564-14805583 Msa0317210:five_prime_UTR 25.0%
AACCTCAAAAAGAACAACAA+CGG + chr2_4:14799656-14799675 None:intergenic 30.0%
AAAGGAGAGTTTGAAGAAAA+TGG + chr2_4:14799738-14799757 None:intergenic 30.0%
TCCACAACATAAACATCATA+TGG - chr2_4:14799834-14799853 Msa0317210:CDS 30.0%
CAAAGGAAAACAACAAAACA+AGG + chr2_4:14799885-14799904 None:intergenic 30.0%
!!! CTTGTTTTGTTGTTTTCCTT+TGG - chr2_4:14799883-14799902 Msa0317210:CDS 30.0%
!!! TTGTTTTCCTTTGGTTTTGA+TGG - chr2_4:14799892-14799911 Msa0317210:CDS 30.0%
! TTTCAGTCTAGAATCAAATG+GGG + chr2_4:14800002-14800021 None:intergenic 30.0%
!!! GGTTTTGGTTTTTTCATCAA+TGG - chr2_4:14800053-14800072 Msa0317210:CDS 30.0%
!! TCATCAATGGTTTGAGTTTT+AGG - chr2_4:14800066-14800085 Msa0317210:CDS 30.0%
! GTTTTTCCTTACACCAATTT+AGG - chr2_4:14800112-14800131 Msa0317210:CDS 30.0%
! TTTTACTTGAGACATATGTC+GGG - chr2_4:14800333-14800352 Msa0317210:CDS 30.0%
! TGTTCCTCAACAATTTTTGA+TGG - chr2_4:14800413-14800432 Msa0317210:intron 30.0%
CTAACGTTGTTTATAAATGG+AGG - chr2_4:14800448-14800467 Msa0317210:intron 30.0%
!!! ATGAATGGTTATTGGCTTTT+GGG - chr2_4:14800643-14800662 Msa0317210:CDS 30.0%
AACTTGACCAAATTCTTGAA+GGG + chr2_4:14800787-14800806 None:intergenic 30.0%
AAACTTGACCAAATTCTTGA+AGG + chr2_4:14800788-14800807 None:intergenic 30.0%
CAATCTTCCTAATTACATCA+TGG + chr2_4:14801028-14801047 None:intergenic 30.0%
TGATGTAATTAGGAAGATTG+AGG - chr2_4:14801028-14801047 Msa0317210:intron 30.0%
AGGTAATAACTAGAGAACTA+GGG - chr2_4:14801048-14801067 Msa0317210:intron 30.0%
! AATGTAATGTGTTTTCGGAA+TGG + chr2_4:14801281-14801300 None:intergenic 30.0%
AATCAATGCATTAAACATGG+TGG - chr2_4:14801547-14801566 Msa0317210:CDS 30.0%
ATCAATGCATTAAACATGGT+GGG - chr2_4:14801548-14801567 Msa0317210:CDS 30.0%
!!! TCTCGAATGTTTATCGATTT+TGG - chr2_4:14801767-14801786 Msa0317210:CDS 30.0%
TTGTGAATCTAGATTCACTA+TGG - chr2_4:14801819-14801838 Msa0317210:CDS 30.0%
!! ACATTAAGTTTTGGCAATGT+CGG + chr2_4:14801851-14801870 None:intergenic 30.0%
! CAGTTGACTACATTAAGTTT+TGG + chr2_4:14801860-14801879 None:intergenic 30.0%
!! ATCGATTTGATAACCATGTA+TGG - chr2_4:14802006-14802025 Msa0317210:intron 30.0%
! AAAATAGCCTCTCCTTTTAA+TGG - chr2_4:14802038-14802057 Msa0317210:intron 30.0%
! AAATAGCCTCTCCTTTTAAT+GGG - chr2_4:14802039-14802058 Msa0317210:intron 30.0%
!! TATGGCTAGAAAATTTTGAC+AGG - chr2_4:14802175-14802194 Msa0317210:intron 30.0%
!! ATGGCTAGAAAATTTTGACA+GGG - chr2_4:14802176-14802195 Msa0317210:intron 30.0%
CAATACCTTAATTGTCTTCA+TGG + chr2_4:14802356-14802375 None:intergenic 30.0%
!! AAGGTATTGAGTTGAATACT+TGG - chr2_4:14802367-14802386 Msa0317210:intron 30.0%
CAGAAAAATACCTGATAAAC+TGG - chr2_4:14802709-14802728 Msa0317210:intron 30.0%
! GATATTTTCATAAGCTATCC+TGG - chr2_4:14803107-14803126 Msa0317210:intron 30.0%
! AAGCACTTGTTAGATTGTTT+GGG + chr2_4:14803196-14803215 None:intergenic 30.0%
! TAAGCACTTGTTAGATTGTT+TGG + chr2_4:14803197-14803216 None:intergenic 30.0%
AACAAAAAAGGGTGAAAGTA+CGG - chr2_4:14803411-14803430 Msa0317210:intron 30.0%
TTGTATTTCTCGTAATGCTT+AGG + chr2_4:14803569-14803588 None:intergenic 30.0%
! CAATTCAAACCAGAAAGTAT+AGG + chr2_4:14803704-14803723 None:intergenic 30.0%
TCAAGAAATACAATGGGTAA+GGG - chr2_4:14803914-14803933 Msa0317210:intron 30.0%
ACCTTATCATTGACCTTAAA+AGG + chr2_4:14803962-14803981 None:intergenic 30.0%
!! GGTTTTGTATGATGACATAA+TGG - chr2_4:14804063-14804082 Msa0317210:intron 30.0%
TGAGTGAGAGAAGAAATATA+AGG + chr2_4:14804128-14804147 None:intergenic 30.0%
!!! CTTTTAAAGTCACACATGAT+TGG - chr2_4:14804353-14804372 Msa0317210:intron 30.0%
AGGAAATACTACAAGAAAAC+GGG + chr2_4:14804773-14804792 None:intergenic 30.0%
CAGGAAATACTACAAGAAAA+CGG + chr2_4:14804774-14804793 None:intergenic 30.0%
TTTATCATGGAAATGGAAAC+AGG + chr2_4:14804793-14804812 None:intergenic 30.0%
!! TTGTTTCTGGAAATGCATTA+TGG - chr2_4:14804892-14804911 Msa0317210:CDS 30.0%
! AGGTGAAGAGAAGTTTTTAT+TGG - chr2_4:14804992-14805011 Msa0317210:CDS 30.0%
TAGTAGTAATACATATGCAG+AGG - chr2_4:14805654-14805673 Msa0317210:five_prime_UTR 30.0%
!!! ACCCTTTTTTCACTCTCAAA+AGG - chr2_4:14799705-14799724 Msa0317210:intron 35.0%
!! CCCTTTTGAGAGTGAAAAAA+GGG + chr2_4:14799709-14799728 None:intergenic 35.0%
!!! CCCTTTTTTCACTCTCAAAA+GGG - chr2_4:14799706-14799725 Msa0317210:intron 35.0%
!! ACCCTTTTGAGAGTGAAAAA+AGG + chr2_4:14799710-14799729 None:intergenic 35.0%
! GAGAAAGAGAGGATTTTGAA+GGG + chr2_4:14799764-14799783 None:intergenic 35.0%
! AGAGAAAGAGAGGATTTTGA+AGG + chr2_4:14799765-14799784 None:intergenic 35.0%
TTGTGGAAAAACAAAAACCC+AGG + chr2_4:14799821-14799840 None:intergenic 35.0%
GCCATATGATGTTTATGTTG+TGG + chr2_4:14799838-14799857 None:intergenic 35.0%
AGAAGTGAAGTCAAACAATG+TGG + chr2_4:14799920-14799939 None:intergenic 35.0%
TAGAATCAAATGGGGCAAAA+GGG + chr2_4:14799994-14800013 None:intergenic 35.0%
TTCCTAAACCAACCCTAAAT+TGG + chr2_4:14800128-14800147 None:intergenic 35.0%
!! GGTGGATTTTGAAGGATTTA+AGG - chr2_4:14800226-14800245 Msa0317210:CDS 35.0%
TTGAAGGATTTAAGGATGTC+AGG - chr2_4:14800234-14800253 Msa0317210:CDS 35.0%
!!! TTGATGCTGTTTTTGTGTCA+TGG - chr2_4:14800265-14800284 Msa0317210:CDS 35.0%
!!! TGATGCTGTTTTTGTGTCAT+GGG - chr2_4:14800266-14800285 Msa0317210:CDS 35.0%
TTTACTTGAGACATATGTCG+GGG - chr2_4:14800334-14800353 Msa0317210:CDS 35.0%
TTGTTTATAAATGGAGGGCA+AGG - chr2_4:14800454-14800473 Msa0317210:intron 35.0%
ATAGATTCCTCGAAACCAAA+TGG + chr2_4:14800503-14800522 None:intergenic 35.0%
!!! GATGAATGGTTATTGGCTTT+TGG - chr2_4:14800642-14800661 Msa0317210:CDS 35.0%
! TTTGGGAATTTTTGTCACGA+AGG - chr2_4:14800660-14800679 Msa0317210:CDS 35.0%
TAACAAGAACACATGAGCTT+AGG + chr2_4:14800705-14800724 None:intergenic 35.0%
TGTTCTTGTTAGATGCTACA+TGG - chr2_4:14800714-14800733 Msa0317210:CDS 35.0%
! ATAAGAAGAAGTGCAATGTG+TGG + chr2_4:14800758-14800777 None:intergenic 35.0%
AAGGTTATCAATTGTGACTG+TGG - chr2_4:14800863-14800882 Msa0317210:intron 35.0%
GAGGTAATAACTAGAGAACT+AGG - chr2_4:14801047-14801066 Msa0317210:intron 35.0%
! AACTAGAGAACTAGGGTTTT+AGG - chr2_4:14801055-14801074 Msa0317210:intron 35.0%
! ACTAGAGAACTAGGGTTTTA+GGG - chr2_4:14801056-14801075 Msa0317210:intron 35.0%
! TAGCTGACATGGTTTAAGAT+TGG + chr2_4:14801174-14801193 None:intergenic 35.0%
TGTTGCTGTGATAAAGGATA+CGG - chr2_4:14801343-14801362 Msa0317210:CDS 35.0%
GAAATCTGTTGTAATCCTTG+AGG - chr2_4:14801378-14801397 Msa0317210:CDS 35.0%
CAGATTGTGATTTCTGTGAT+CGG - chr2_4:14801467-14801486 Msa0317210:CDS 35.0%
ATGGATCAAAACTCGAAACT+CGG + chr2_4:14801650-14801669 None:intergenic 35.0%
!!! AGTTTCGAGTTTTGATCCAT+CGG - chr2_4:14801650-14801669 Msa0317210:CDS 35.0%
! ATTCGAGATTTGTATCGATC+GGG + chr2_4:14801755-14801774 None:intergenic 35.0%
! CATTCGAGATTTGTATCGAT+CGG + chr2_4:14801756-14801775 None:intergenic 35.0%
ATCAACAAAAGAAAAGTGGC+TGG + chr2_4:14801907-14801926 None:intergenic 35.0%
! AATAGCCTCTCCTTTTAATG+GGG - chr2_4:14802040-14802059 Msa0317210:intron 35.0%
TGAAGCTATGTGTCCAAATA+TGG - chr2_4:14802236-14802255 Msa0317210:intron 35.0%
TAATTTGATCCCCAGTTAGT+GGG - chr2_4:14802281-14802300 Msa0317210:intron 35.0%
!!! TACTTCATGCTAGTTTTCTG+TGG - chr2_4:14802481-14802500 Msa0317210:intron 35.0%
! GAATAAAAGTGGGTTCAAAG+TGG + chr2_4:14802558-14802577 None:intergenic 35.0%
CGTGACAAGAGAATAAAAGT+GGG + chr2_4:14802568-14802587 None:intergenic 35.0%
!! CCACTTTTATTCTCTTGTCA+CGG - chr2_4:14802566-14802585 Msa0317210:intron 35.0%
! AACCTCAATTTTTCTCTGAC+AGG - chr2_4:14802608-14802627 Msa0317210:intron 35.0%
TACCTGTCAGAGAAAAATTG+AGG + chr2_4:14802613-14802632 None:intergenic 35.0%
! TGGTTCTATACCAGTTTATC+AGG + chr2_4:14802722-14802741 None:intergenic 35.0%
ATCTGCAATGCAGAAAACAT+AGG + chr2_4:14802813-14802832 None:intergenic 35.0%
AGTTCAGATATTGTATGGTC+AGG - chr2_4:14802855-14802874 Msa0317210:intron 35.0%
! AGTTATTTCCACGCATTGTT+GGG - chr2_4:14802981-14803000 Msa0317210:intron 35.0%
! TGACTTTTATTGGCATACAG+AGG - chr2_4:14803268-14803287 Msa0317210:intron 35.0%
TGTGTATATTATGGCTGAAG+AGG - chr2_4:14803340-14803359 Msa0317210:intron 35.0%
GAAGAGGAAAATCACTATCT+CGG - chr2_4:14803356-14803375 Msa0317210:intron 35.0%
AAATCACTATCTCGGTTACT+TGG - chr2_4:14803364-14803383 Msa0317210:intron 35.0%
TTTCATCACACCTAATGTTC+AGG - chr2_4:14803499-14803518 Msa0317210:intron 35.0%
!! CCATTCTTTTGGGAAGAATA+GGG + chr2_4:14803727-14803746 None:intergenic 35.0%
TATTCTTCCCAAAAGAATGG+CGG - chr2_4:14803727-14803746 Msa0317210:intron 35.0%
TTCCCACCATCTTCAAATTT+CGG + chr2_4:14803758-14803777 None:intergenic 35.0%
ACTTCTATTCCTCTTATTGC+TGG + chr2_4:14803807-14803826 None:intergenic 35.0%
TAAGAGGAATAGAAGTTCTG+TGG - chr2_4:14803811-14803830 Msa0317210:intron 35.0%
!!! ACAGTTTTAGTTTCAGACTC+GGG + chr2_4:14803895-14803914 None:intergenic 35.0%
!!! GACAGTTTTAGTTTCAGACT+CGG + chr2_4:14803896-14803915 None:intergenic 35.0%
GTCAAGAAATACAATGGGTA+AGG - chr2_4:14803913-14803932 Msa0317210:intron 35.0%
!!! GCCTTTTAAGGTCAATGATA+AGG - chr2_4:14803958-14803977 Msa0317210:intron 35.0%
!! GTGATTTTTGAGGAAGAATG+CGG - chr2_4:14804481-14804500 Msa0317210:intron 35.0%
CAAGTAATTCAAGTCATACC+AGG + chr2_4:14804747-14804766 None:intergenic 35.0%
CTGGTATGACTTGAATTACT+TGG - chr2_4:14804745-14804764 Msa0317210:intron 35.0%
GGAAATACTACAAGAAAACG+GGG + chr2_4:14804772-14804791 None:intergenic 35.0%
! ATGGTAATGTGATTCTCTTC+AGG - chr2_4:14804972-14804991 Msa0317210:CDS 35.0%
CATGTTATCAATCCAGTCTT+GGG + chr2_4:14805042-14805061 None:intergenic 35.0%
ACATGTTATCAATCCAGTCT+TGG + chr2_4:14805043-14805062 None:intergenic 35.0%
! AAGACTGGATTGATAACATG+TGG - chr2_4:14805042-14805061 Msa0317210:CDS 35.0%
! AGACTGGATTGATAACATGT+GGG - chr2_4:14805043-14805062 Msa0317210:CDS 35.0%
GGTTAATATATTGGGAAAGC+CGG - chr2_4:14805064-14805083 Msa0317210:CDS 35.0%
GATAAAAAGCTGCAAATGTC+CGG + chr2_4:14805086-14805105 None:intergenic 35.0%
! CAGAATTAGCTTGAAACTTG+GGG + chr2_4:14805124-14805143 None:intergenic 35.0%
! GCAGAATTAGCTTGAAACTT+GGG + chr2_4:14805125-14805144 None:intergenic 35.0%
! TGCAGAATTAGCTTGAAACT+TGG + chr2_4:14805126-14805145 None:intergenic 35.0%
TAAAGTTGAAGTTGCTCCAA+AGG - chr2_4:14805208-14805227 Msa0317210:five_prime_UTR 35.0%
! GATGATTTTTGCTCAACCTT+TGG + chr2_4:14805227-14805246 None:intergenic 35.0%
AAGGTTGAGCAAAAATCATC+TGG - chr2_4:14805227-14805246 Msa0317210:five_prime_UTR 35.0%
TGAGCAAAAATCATCTGGTT+TGG - chr2_4:14805232-14805251 Msa0317210:five_prime_UTR 35.0%
!! TCTGGTTTGGAAGAACTTAA+TGG - chr2_4:14805245-14805264 Msa0317210:five_prime_UTR 35.0%
GTATGAAGAGAATGACTTTG+TGG - chr2_4:14805270-14805289 Msa0317210:five_prime_UTR 35.0%
TGATGCGTTTGATAAAGACA+AGG - chr2_4:14805376-14805395 Msa0317210:five_prime_UTR 35.0%
AAAGACAAGGATTGTAACTC+TGG - chr2_4:14805389-14805408 Msa0317210:five_prime_UTR 35.0%
!! TTGGTGATGGAGGAAAAAAT+TGG - chr2_4:14805494-14805513 Msa0317210:five_prime_UTR 35.0%
ACATATGCAGAGGATAATGA+TGG - chr2_4:14805664-14805683 Msa0317210:five_prime_UTR 35.0%
!! CACCGTTGTTGTTCTTTTTG+AGG - chr2_4:14799651-14799670 Msa0317210:CDS 40.0%
!! GAGGATTTTGAAGGGTGAAA+AGG + chr2_4:14799756-14799775 None:intergenic 40.0%
AATGGATGAGAGAGAAAGAG+AGG + chr2_4:14799775-14799794 None:intergenic 40.0%
!! AAACCCAGGTTTTGTGAAGT+GGG + chr2_4:14799807-14799826 None:intergenic 40.0%
!! AAAACCCAGGTTTTGTGAAG+TGG + chr2_4:14799808-14799827 None:intergenic 40.0%
AGAGAGAAACTATAGCGTCA+TGG + chr2_4:14799955-14799974 None:intergenic 40.0%
CTAGAATCAAATGGGGCAAA+AGG + chr2_4:14799995-14800014 None:intergenic 40.0%
!!! TTTTTTCATCTGGGTCGTTG+TGG - chr2_4:14800032-14800051 Msa0317210:CDS 40.0%
!!! ATTTTTTGGGCTAGCTCGAT+AGG - chr2_4:14800089-14800108 Msa0317210:CDS 40.0%
!!! TTTTTTGGGCTAGCTCGATA+GGG - chr2_4:14800090-14800109 Msa0317210:CDS 40.0%
! TCCTTACACCAATTTAGGGT+TGG - chr2_4:14800117-14800136 Msa0317210:CDS 40.0%
ACCAACCCTAAATTGGTGTA+AGG + chr2_4:14800121-14800140 None:intergenic 40.0%
!! CACCAATTTAGGGTTGGTTT+AGG - chr2_4:14800123-14800142 Msa0317210:CDS 40.0%
!!! TAGAGTGTTGCTTTTGCTGT+TGG - chr2_4:14800196-14800215 Msa0317210:CDS 40.0%
TTTAAGGATGTCAGGTGATG+AGG - chr2_4:14800242-14800261 Msa0317210:CDS 40.0%
! AAGTGATATGTCAAGAGCGT+GGG - chr2_4:14800295-14800314 Msa0317210:CDS 40.0%
TTACTTGAGACATATGTCGG+GGG - chr2_4:14800335-14800354 Msa0317210:CDS 40.0%
TTTATAAATGGAGGGCAAGG+AGG - chr2_4:14800457-14800476 Msa0317210:intron 40.0%
TTATAAATGGAGGGCAAGGA+GGG - chr2_4:14800458-14800477 Msa0317210:intron 40.0%
TTTGTGGTTGCAAGTGTATG+TGG - chr2_4:14800604-14800623 Msa0317210:intron 40.0%
TGAGTCACCCTTCAAGAATT+TGG - chr2_4:14800777-14800796 Msa0317210:CDS 40.0%
TGACCTCAAAAGTCTTTACG+TGG - chr2_4:14800967-14800986 Msa0317210:intron 40.0%
GGACTATTATTCTTTGGGCT+GGG + chr2_4:14801153-14801172 None:intergenic 40.0%
TGGACTATTATTCTTTGGGC+TGG + chr2_4:14801154-14801173 None:intergenic 40.0%
! CTTTCATTGACTAGCTGACA+TGG + chr2_4:14801185-14801204 None:intergenic 40.0%
CGTGACACAATACACTCTAT+CGG - chr2_4:14801220-14801239 Msa0317210:intron 40.0%
GTGACACAATACACTCTATC+GGG - chr2_4:14801221-14801240 Msa0317210:intron 40.0%
!! CTTTAAAATGACGCGTCAGT+GGG + chr2_4:14801258-14801277 None:intergenic 40.0%
CAAGTCTGTTGCTGTGATAA+AGG - chr2_4:14801337-14801356 Msa0317210:CDS 40.0%
TTGTAATCCTTGAGGCTTGA+TGG - chr2_4:14801386-14801405 Msa0317210:CDS 40.0%
! GGCTTGATGGATAAGGAAAT+TGG - chr2_4:14801399-14801418 Msa0317210:CDS 40.0%
AAATCACAATCTGGCAGCTA+CGG + chr2_4:14801460-14801479 None:intergenic 40.0%
CGATCACAGAAATCACAATC+TGG + chr2_4:14801469-14801488 None:intergenic 40.0%
TGGATCAAAACTCGAAACTC+GGG + chr2_4:14801649-14801668 None:intergenic 40.0%
ACAGGTGACCATTGTTATGA+GGG + chr2_4:14802112-14802131 None:intergenic 40.0%
AACAGGTGACCATTGTTATG+AGG + chr2_4:14802113-14802132 None:intergenic 40.0%
! CAGGGTATCCTTTGATCAAT+TGG - chr2_4:14802194-14802213 Msa0317210:intron 40.0%
GTAATTTGATCCCCAGTTAG+TGG - chr2_4:14802280-14802299 Msa0317210:intron 40.0%
TGCGTCCATGAAGACAATTA+AGG - chr2_4:14802348-14802367 Msa0317210:intron 40.0%
ACGGCAAAAATGGAATGCAA+CGG + chr2_4:14802507-14802526 None:intergenic 40.0%
AGCAAAAGACACGGCAAAAA+TGG + chr2_4:14802517-14802536 None:intergenic 40.0%
CCATGTTGTAGCAAAAGACA+CGG + chr2_4:14802526-14802545 None:intergenic 40.0%
CCGTGACAAGAGAATAAAAG+TGG + chr2_4:14802569-14802588 None:intergenic 40.0%
CAAAGGAAACTAACGACAGA+TGG + chr2_4:14802759-14802778 None:intergenic 40.0%
CAATGCAGAAAACATAGGCA+TGG + chr2_4:14802808-14802827 None:intergenic 40.0%
CTTCAGCTGTTTAGCACAAA+AGG + chr2_4:14802889-14802908 None:intergenic 40.0%
! CAGTTATTTCCACGCATTGT+TGG - chr2_4:14802980-14802999 Msa0317210:intron 40.0%
CTTACTTTCATAAGCTCTCC+AGG + chr2_4:14803128-14803147 None:intergenic 40.0%
AGATTGTTTGGGAGAGCTTA+TGG + chr2_4:14803185-14803204 None:intergenic 40.0%
AATGATAACAAGGGTCTGTG+TGG + chr2_4:14803249-14803268 None:intergenic 40.0%
! AAAAAAGGGTGAAAGTACGG+TGG - chr2_4:14803414-14803433 Msa0317210:intron 40.0%
TACATGGATCTCAGATGAAG+AGG + chr2_4:14803609-14803628 None:intergenic 40.0%
CTGAGATCCATGTATGTTCT+AGG - chr2_4:14803615-14803634 Msa0317210:intron 40.0%
TAAGCTGCCTAGAACATACA+TGG + chr2_4:14803625-14803644 None:intergenic 40.0%
CTCAGCTTAGTAAGTGCAAA+GGG + chr2_4:14803665-14803684 None:intergenic 40.0%
TTTGCACTTACTAAGCTGAG+CGG - chr2_4:14803665-14803684 Msa0317210:intron 40.0%
AGTAACCAGCCTATACTTTC+TGG - chr2_4:14803692-14803711 Msa0317210:intron 40.0%
! TCAAACCAGAAAGTATAGGC+TGG + chr2_4:14803700-14803719 None:intergenic 40.0%
CCCTATTCTTCCCAAAAGAA+TGG - chr2_4:14803724-14803743 Msa0317210:intron 40.0%
!! GCCATTCTTTTGGGAAGAAT+AGG + chr2_4:14803728-14803747 None:intergenic 40.0%
GACTGTCCGAAATTTGAAGA+TGG - chr2_4:14803749-14803768 Msa0317210:intron 40.0%
TGTCCGAAATTTGAAGATGG+TGG - chr2_4:14803752-14803771 Msa0317210:intron 40.0%
GTCCGAAATTTGAAGATGGT+GGG - chr2_4:14803753-14803772 Msa0317210:intron 40.0%
TCACTCAAGATGATCCTTTG+AGG - chr2_4:14803780-14803799 Msa0317210:intron 40.0%
! TAGAAGTTCTGTGGAGTACT+CGG - chr2_4:14803820-14803839 Msa0317210:intron 40.0%
TCTTCTGATGAGATGCCAAA+TGG - chr2_4:14803857-14803876 Msa0317210:intron 40.0%
AGTTTCAGACTCGGGTATTT+CGG + chr2_4:14803887-14803906 None:intergenic 40.0%
TTAAAAGGCAGTTCAGGCTT+AGG + chr2_4:14803947-14803966 None:intergenic 40.0%
! TAAGCCTGAACTGCCTTTTA+AGG - chr2_4:14803946-14803965 Msa0317210:intron 40.0%
TTGACCTTAAAAGGCAGTTC+AGG + chr2_4:14803953-14803972 None:intergenic 40.0%
GAGTTTCTCTCTCAAGATAG+TGG - chr2_4:14803983-14804002 Msa0317210:intron 40.0%
! TCTCAAGATAGTGGCATTAG+AGG - chr2_4:14803992-14804011 Msa0317210:intron 40.0%
TGCATCTCATAAGAAGCTCA+AGG - chr2_4:14804042-14804061 Msa0317210:intron 40.0%
TGACGACTTTGACTGATTGA+TGG + chr2_4:14804303-14804322 None:intergenic 40.0%
! ATGATTGCGGGTGATTTTTG+AGG - chr2_4:14804471-14804490 Msa0317210:intron 40.0%
! GCTGTTGATGCTTCTGAAAA+TGG - chr2_4:14804702-14804721 Msa0317210:intron 40.0%
! TTCTGAAAATGGAACCTGTC+AGG - chr2_4:14804713-14804732 Msa0317210:intron 40.0%
! AATCCGAAGGTCTCTCTTTT+CGG + chr2_4:14805018-14805037 None:intergenic 40.0%
! AATTAGCTTGAAACTTGGGG+CGG + chr2_4:14805121-14805140 None:intergenic 40.0%
GTTTCAAGCTAATTCTGCAG+TGG - chr2_4:14805127-14805146 Msa0317210:five_prime_UTR 40.0%
ACTTCAACTTTAGCGATTGG+TGG + chr2_4:14805200-14805219 None:intergenic 40.0%
GCAACTTCAACTTTAGCGAT+TGG + chr2_4:14805203-14805222 None:intergenic 40.0%
GGTTTGGAAGAACTTAATGG+CGG - chr2_4:14805248-14805267 Msa0317210:five_prime_UTR 40.0%
! GTTTTGTGAAGTGGGGTTCA+AGG + chr2_4:14799799-14799818 None:intergenic 45.0%
AACCCCACTTCACAAAACCT+GGG - chr2_4:14799801-14799820 Msa0317210:CDS 45.0%
!! AACCCAGGTTTTGTGAAGTG+GGG + chr2_4:14799806-14799825 None:intergenic 45.0%
TGTGGCACCATCAAAACCAA+AGG + chr2_4:14799902-14799921 None:intergenic 45.0%
AATCAAATGGGGCAAAAGGG+TGG + chr2_4:14799991-14800010 None:intergenic 45.0%
!!! GTTGCTTTTGCTGTTGGTAG+CGG - chr2_4:14800202-14800221 Msa0317210:CDS 45.0%
!!! TGCTGTTTTTGTGTCATGGG+AGG - chr2_4:14800269-14800288 Msa0317210:CDS 45.0%
CAAGTGATATGTCAAGAGCG+TGG - chr2_4:14800294-14800313 Msa0317210:CDS 45.0%
! TGTTGACTGGCTCAACCATT+TGG - chr2_4:14800485-14800504 Msa0317210:intron 45.0%
AGGAATCTATCGCACCGTAA+TGG - chr2_4:14800513-14800532 Msa0317210:intron 45.0%
! CCACCACGTAAAGACTTTTG+AGG + chr2_4:14800973-14800992 None:intergenic 45.0%
CCTCAAAAGTCTTTACGTGG+TGG - chr2_4:14800970-14800989 Msa0317210:intron 45.0%
TGATACATTTCAGCTCCACG+TGG + chr2_4:14801090-14801109 None:intergenic 45.0%
!! GCTTTAAAATGACGCGTCAG+TGG + chr2_4:14801259-14801278 None:intergenic 45.0%
! TGACAGTGTTGAAGAAGCAC+AGG + chr2_4:14801319-14801338 None:intergenic 45.0%
CTGTGATAAAGGATACGGAG+TGG - chr2_4:14801348-14801367 Msa0317210:CDS 45.0%
TGATAAAGGATACGGAGTGG+TGG - chr2_4:14801351-14801370 Msa0317210:CDS 45.0%
GATAAAGGATACGGAGTGGT+GGG - chr2_4:14801352-14801371 Msa0317210:CDS 45.0%
ATAAAGGATACGGAGTGGTG+GGG - chr2_4:14801353-14801372 Msa0317210:CDS 45.0%
! TCCTTGAGGCTTGATGGATA+AGG - chr2_4:14801392-14801411 Msa0317210:CDS 45.0%
TCCTTATCCATCAAGCCTCA+AGG + chr2_4:14801396-14801415 None:intergenic 45.0%
!! CGAGTTTTGATCCATCGGTA+AGG - chr2_4:14801655-14801674 Msa0317210:CDS 45.0%
ATCGGTAAGGTTGCTGCATT+GGG - chr2_4:14801668-14801687 Msa0317210:CDS 45.0%
! CCGTGTCTTTTGCTACAACA+TGG - chr2_4:14802523-14802542 Msa0317210:intron 45.0%
GATGATTCAGCAAATGCTGC+AGG - chr2_4:14802641-14802660 Msa0317210:CDS 45.0%
TCTCTTGATACGTTCGCAGA+TGG - chr2_4:14802671-14802690 Msa0317210:CDS 45.0%
! AAACAGCTGAAGCACTACTC+AGG - chr2_4:14802897-14802916 Msa0317210:intron 45.0%
! AACAGCTGAAGCACTACTCA+GGG - chr2_4:14802898-14802917 Msa0317210:intron 45.0%
TACTCAGGGTTTGACAGGAA+AGG - chr2_4:14802912-14802931 Msa0317210:intron 45.0%
ACTCAGGGTTTGACAGGAAA+GGG - chr2_4:14802913-14802932 Msa0317210:intron 45.0%
TCCAGAGCTTGATCTTCATG+AGG - chr2_4:14803469-14803488 Msa0317210:intron 45.0%
CCAGAGCTTGATCTTCATGA+GGG - chr2_4:14803470-14803489 Msa0317210:intron 45.0%
! GCACTGATCACCTGAACATT+AGG + chr2_4:14803512-14803531 None:intergenic 45.0%
! ATCAGTGCTGAGTGCATCAA+TGG - chr2_4:14803524-14803543 Msa0317210:intron 45.0%
TTAGGAGTCAGAACTGTTGC+AGG + chr2_4:14803551-14803570 None:intergenic 45.0%
GCTCAGCTTAGTAAGTGCAA+AGG + chr2_4:14803666-14803685 None:intergenic 45.0%
CTCTTATTGCTGGACCTCAA+AGG + chr2_4:14803797-14803816 None:intergenic 45.0%
!! CTTTGAGGTCCAGCAATAAG+AGG - chr2_4:14803795-14803814 Msa0317210:intron 45.0%
GAGTACTCGGTAGCTGAAAA+GGG - chr2_4:14803833-14803852 Msa0317210:intron 45.0%
GGGTATTTCGGTACACCATT+TGG + chr2_4:14803875-14803894 None:intergenic 45.0%
ATAGTGGCATTAGAGGATGC+TGG - chr2_4:14803999-14804018 Msa0317210:intron 45.0%
!! CATAATGGACGCAGTAGATG+AGG - chr2_4:14804078-14804097 Msa0317210:intron 45.0%
AGATGAGGAGGAACATCTAG+AGG - chr2_4:14804093-14804112 Msa0317210:intron 45.0%
! GTTTTGCCACTCTTTGTGCA+GGG + chr2_4:14804542-14804561 None:intergenic 45.0%
AGTGGCAAAACCTGACAAAC+TGG - chr2_4:14804551-14804570 Msa0317210:intron 45.0%
GTGGCAAAACCTGACAAACT+GGG - chr2_4:14804552-14804571 Msa0317210:intron 45.0%
AACCTGACAAACTGGGTATG+CGG - chr2_4:14804559-14804578 Msa0317210:intron 45.0%
TCTTTGGGCAAGACATCTCA+TGG - chr2_4:14804953-14804972 Msa0317210:CDS 45.0%
! ATTAGCTTGAAACTTGGGGC+GGG + chr2_4:14805120-14805139 None:intergenic 45.0%
GCTAATTCTGCAGTGGTCAA+TGG - chr2_4:14805134-14805153 Msa0317210:five_prime_UTR 45.0%
GTGGTCAATGGATCTATGAC+TGG - chr2_4:14805146-14805165 Msa0317210:five_prime_UTR 45.0%
TCTTCATGAATGGCATGGAG+TGG + chr2_4:14805302-14805321 None:intergenic 45.0%
GATGTCCTCGTCTTCATGAA+TGG + chr2_4:14805312-14805331 None:intergenic 45.0%
! GGTAGTAGCAGTGATGATGA+TGG - chr2_4:14805410-14805429 Msa0317210:five_prime_UTR 45.0%
!! GATGATGGCTCTGACAATGA+CGG - chr2_4:14805425-14805444 Msa0317210:five_prime_UTR 45.0%
TGATGCTGACAACACTAGAG+AGG - chr2_4:14805457-14805476 Msa0317210:five_prime_UTR 45.0%
GAACCAAAACTTGATGCAGC+AGG - chr2_4:14805524-14805543 Msa0317210:five_prime_UTR 45.0%
!! AAATTAAATTATATATCTAT+TGG - chr2_4:14804419-14804438 Msa0317210:intron 5.0%
TGAAGTGGGGTTCAAGGCAA+TGG + chr2_4:14799793-14799812 None:intergenic 50.0%
GAACCCCACTTCACAAAACC+TGG - chr2_4:14799800-14799819 Msa0317210:CDS 50.0%
! CATCTGGGTCGTTGTGGTTT+TGG - chr2_4:14800038-14800057 Msa0317210:CDS 50.0%
!!! GTAGCGGTGGTGGATTTTGA+AGG - chr2_4:14800218-14800237 Msa0317210:CDS 50.0%
GAGACATATGTCGGGGGATT+CGG - chr2_4:14800341-14800360 Msa0317210:intron 50.0%
!! GATTCGGTGCTAGCTGTTGT+GGG - chr2_4:14800357-14800376 Msa0317210:intron 50.0%
!! ATTCGGTGCTAGCTGTTGTG+GGG - chr2_4:14800358-14800377 Msa0317210:intron 50.0%
! GGCTCAACCATTTGGTTTCG+AGG - chr2_4:14800493-14800512 Msa0317210:intron 50.0%
CAATTGCGACTGCAATGCAG+TGG - chr2_4:14800944-14800963 Msa0317210:intron 50.0%
TTACGTGGTGGTTGCAGTTG+TGG - chr2_4:14800982-14801001 Msa0317210:intron 50.0%
! TTTAGGGTTGAGCAACCACG+TGG - chr2_4:14801072-14801091 Msa0317210:intron 50.0%
TAAAGGATACGGAGTGGTGG+GGG - chr2_4:14801354-14801373 Msa0317210:CDS 50.0%
CTGGCAGCTACGGAAAGATT+AGG + chr2_4:14801450-14801469 None:intergenic 50.0%
CAATGCAGCAACCTTACCGA+TGG + chr2_4:14801669-14801688 None:intergenic 50.0%
CATCGGTAAGGTTGCTGCAT+TGG - chr2_4:14801667-14801686 Msa0317210:CDS 50.0%
! CCTCTCCTTTTAATGGGGCA+GGG - chr2_4:14802045-14802064 Msa0317210:intron 50.0%
TGCAACCCTGCCCCATTAAA+AGG + chr2_4:14802053-14802072 None:intergenic 50.0%
ACTCTCCTCGATCCCTATAC+CGG - chr2_4:14802081-14802100 Msa0317210:intron 50.0%
CATTGTTATGAGGGCTCCAC+CGG + chr2_4:14802103-14802122 None:intergenic 50.0%
TTCTCTGACAGGTACACTGC+TGG - chr2_4:14802619-14802638 Msa0317210:intron 50.0%
TTCAGCAAATGCTGCAGGAC+TGG - chr2_4:14802646-14802665 Msa0317210:CDS 50.0%
TCAGCAAATGCTGCAGGACT+GGG - chr2_4:14802647-14802666 Msa0317210:CDS 50.0%
AGCACTACTCAGGGTTTGAC+AGG - chr2_4:14802907-14802926 Msa0317210:intron 50.0%
AAAGTACGGTGGTTTCACCG+TGG - chr2_4:14803425-14803444 Msa0317210:intron 50.0%
CATGCTTGACTTCCTGACCA+CGG + chr2_4:14803445-14803464 None:intergenic 50.0%
CCCTCATGAAGATCAAGCTC+TGG + chr2_4:14803473-14803492 None:intergenic 50.0%
GCTTGATCTTCATGAGGGTG+AGG - chr2_4:14803475-14803494 Msa0317210:intron 50.0%
! GGACAGTCCGCCATTCTTTT+GGG + chr2_4:14803737-14803756 None:intergenic 50.0%
! GGAGTACTCGGTAGCTGAAA+AGG - chr2_4:14803832-14803851 Msa0317210:intron 50.0%
AATGGACGCAGTAGATGAGG+AGG - chr2_4:14804081-14804100 Msa0317210:intron 50.0%
ATGGATCCCTGCACAAAGAG+TGG - chr2_4:14804533-14804552 Msa0317210:intron 50.0%
! GGTTTTGCCACTCTTTGTGC+AGG + chr2_4:14804543-14804562 None:intergenic 50.0%
AAACTGGGTATGCGGTGTGA+CGG - chr2_4:14804567-14804586 Msa0317210:intron 50.0%
GGCGTGGTCGTACTAATAAG+CGG + chr2_4:14804593-14804612 None:intergenic 50.0%
TTAACAGATTCAGGAGGGCG+TGG + chr2_4:14804609-14804628 None:intergenic 50.0%
CGCCCTCCTGAATCTGTTAA+AGG - chr2_4:14804609-14804628 Msa0317210:intron 50.0%
TTTCGAGATTGGAGCAGCTG+TGG - chr2_4:14804638-14804657 Msa0317210:intron 50.0%
ACCTGTCAGGTTTATTCGCC+TGG - chr2_4:14804726-14804745 Msa0317210:intron 50.0%
ACCAGGCGAATAAACCTGAC+AGG + chr2_4:14804730-14804749 None:intergenic 50.0%
TGGCCGAAAAGAGAGACCTT+CGG - chr2_4:14805012-14805031 Msa0317210:CDS 50.0%
ACCTTCGGATTTCCCAAGAC+TGG - chr2_4:14805027-14805046 Msa0317210:CDS 50.0%
TCCAGTCTTGGGAAATCCGA+AGG + chr2_4:14805031-14805050 None:intergenic 50.0%
! TTAGCTTGAAACTTGGGGCG+GGG + chr2_4:14805119-14805138 None:intergenic 50.0%
TCATGAATGGCATGGAGTGG+TGG + chr2_4:14805299-14805318 None:intergenic 50.0%
CCTCGTCTTCATGAATGGCA+TGG + chr2_4:14805307-14805326 None:intergenic 50.0%
CCATGCCATTCATGAAGACG+AGG - chr2_4:14805304-14805323 Msa0317210:five_prime_UTR 50.0%
!! ATCGACTCTGGTGGCTTTGA+TGG - chr2_4:14805329-14805348 Msa0317210:five_prime_UTR 50.0%
AGAGGACAGCGAGGAGAATT+TGG - chr2_4:14805475-14805494 Msa0317210:five_prime_UTR 50.0%
! CAGCGAGGAGAATTTGGTGA+TGG - chr2_4:14805481-14805500 Msa0317210:five_prime_UTR 50.0%
!! CGAGGAGAATTTGGTGATGG+AGG - chr2_4:14805484-14805503 Msa0317210:five_prime_UTR 50.0%
! GCTCCTGCTGCATCAAGTTT+TGG + chr2_4:14805530-14805549 None:intergenic 50.0%
TGATGCAGCAGGAGCAATAC+AGG - chr2_4:14805535-14805554 Msa0317210:five_prime_UTR 50.0%
!!! GCTTTTGCTGTTGGTAGCGG+TGG - chr2_4:14800205-14800224 Msa0317210:CDS 55.0%
!! TTTGCTGTTGGTAGCGGTGG+TGG - chr2_4:14800208-14800227 Msa0317210:CDS 55.0%
!! GGATTCGGTGCTAGCTGTTG+TGG - chr2_4:14800356-14800375 Msa0317210:intron 55.0%
TAGCTGTTGTGGGGACTGAG+AGG - chr2_4:14800367-14800386 Msa0317210:intron 55.0%
TAAATGGAGGGCAAGGAGGG+AGG - chr2_4:14800461-14800480 Msa0317210:intron 55.0%
CAAGGAGGGAGGTTGTTGAC+TGG - chr2_4:14800472-14800491 Msa0317210:intron 55.0%
! GCCTCTCCTTTTAATGGGGC+AGG - chr2_4:14802044-14802063 Msa0317210:intron 55.0%
CCCTGCCCCATTAAAAGGAG+AGG + chr2_4:14802048-14802067 None:intergenic 55.0%
ATGAGGGCTCCACCGGTATA+GGG + chr2_4:14802096-14802115 None:intergenic 55.0%
TATGAGGGCTCCACCGGTAT+AGG + chr2_4:14802097-14802116 None:intergenic 55.0%
CGGTGGAGCCCTCATAACAA+TGG - chr2_4:14802101-14802120 Msa0317210:intron 55.0%
GATCCCCAGTTAGTGGGATG+AGG - chr2_4:14802287-14802306 Msa0317210:intron 55.0%
CAGCCTCATCCCACTAACTG+GGG + chr2_4:14802293-14802312 None:intergenic 55.0%
CCAGCCTCATCCCACTAACT+GGG + chr2_4:14802294-14802313 None:intergenic 55.0%
AAACAGGGCCCAACAATGCG+TGG + chr2_4:14802992-14803011 None:intergenic 55.0%
ACGCATTGTTGGGCCCTGTT+TGG - chr2_4:14802991-14803010 Msa0317210:intron 55.0%
! CGGACAGTCCGCCATTCTTT+TGG + chr2_4:14803738-14803757 None:intergenic 55.0%
CACCGCATACCCAGTTTGTC+AGG + chr2_4:14804564-14804583 None:intergenic 55.0%
TAGCTTGAAACTTGGGGCGG+GGG + chr2_4:14805118-14805137 None:intergenic 55.0%
!! GAAGACGAGGACATCGACTC+TGG - chr2_4:14805317-14805336 Msa0317210:five_prime_UTR 55.0%
CAACACTAGAGAGGACAGCG+AGG - chr2_4:14805466-14805485 Msa0317210:five_prime_UTR 55.0%
! TGGGGACTGAGAGGAGTGTG+AGG - chr2_4:14800376-14800395 Msa0317210:intron 60.0%
CTCCTCGATCCCTATACCGG+TGG - chr2_4:14802084-14802103 Msa0317210:intron 60.0%
CTCCACCGGTATAGGGATCG+AGG + chr2_4:14802089-14802108 None:intergenic 60.0%
CCCAGTTAGTGGGATGAGGC+TGG - chr2_4:14802291-14802310 Msa0317210:intron 60.0%
GCCAGCCTCATCCCACTAAC+TGG + chr2_4:14802295-14802314 None:intergenic 60.0%
ACGGTGGTTTCACCGTGGTC+AGG - chr2_4:14803430-14803449 Msa0317210:intron 60.0%
TTGGAGCAGCTGTGGATGCC+TGG - chr2_4:14804646-14804665 Msa0317210:intron 60.0%
CAGCTGTGGATGCCTGGTGT+GGG - chr2_4:14804652-14804671 Msa0317210:intron 60.0%
AGCTGTGGATGCCTGGTGTG+GGG - chr2_4:14804653-14804672 Msa0317210:intron 60.0%
ATGCCTGGTGTGGGGATGGA+TGG - chr2_4:14804661-14804680 Msa0317210:intron 60.0%
CTGGTGTGGGGATGGATGGT+GGG - chr2_4:14804665-14804684 Msa0317210:intron 60.0%
AGCTTGAAACTTGGGGCGGG+GGG + chr2_4:14805117-14805136 None:intergenic 60.0%
!! GACGAGGACATCGACTCTGG+TGG - chr2_4:14805320-14805339 Msa0317210:five_prime_UTR 60.0%
GCAGCTGTGGATGCCTGGTG+TGG - chr2_4:14804651-14804670 Msa0317210:intron 65.0%
GTGGATGCCTGGTGTGGGGA+TGG - chr2_4:14804657-14804676 Msa0317210:intron 65.0%
CCACCATCCATCCCCACACC+AGG + chr2_4:14804667-14804686 None:intergenic 65.0%
CCTGGTGTGGGGATGGATGG+TGG - chr2_4:14804664-14804683 Msa0317210:intron 65.0%
GCTTGAAACTTGGGGCGGGG+GGG + chr2_4:14805116-14805135 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 14799633 14805720 14799633 ID=Msa0317210;Name=Msa0317210
chr2_4 mRNA 14799633 14805720 14799633 ID=Msa0317210-mRNA-1;Parent=Msa0317210;Name=Msa0317210-mRNA-1;_AED=0.10;_eAED=0.10;_QI=616|0.33|0.42|1|1|1|7|0|668
chr2_4 exon 14799633 14799701 14799633 ID=Msa0317210-mRNA-1:exon:5574;Parent=Msa0317210-mRNA-1
chr2_4 exon 14799797 14800359 14799797 ID=Msa0317210-mRNA-1:exon:5573;Parent=Msa0317210-mRNA-1
chr2_4 exon 14800606 14800822 14800606 ID=Msa0317210-mRNA-1:exon:5572;Parent=Msa0317210-mRNA-1
chr2_4 exon 14801290 14802024 14801290 ID=Msa0317210-mRNA-1:exon:5571;Parent=Msa0317210-mRNA-1
chr2_4 exon 14802487 14802522 14802487 ID=Msa0317210-mRNA-1:exon:5570;Parent=Msa0317210-mRNA-1
chr2_4 exon 14802623 14802723 14802623 ID=Msa0317210-mRNA-1:exon:5569;Parent=Msa0317210-mRNA-1
chr2_4 exon 14804819 14805720 14804819 ID=Msa0317210-mRNA-1:exon:5568;Parent=Msa0317210-mRNA-1
chr2_4 five_prime_UTR 14805105 14805720 14805105 ID=Msa0317210-mRNA-1:five_prime_utr;Parent=Msa0317210-mRNA-1
chr2_4 CDS 14804819 14805104 14804819 ID=Msa0317210-mRNA-1:cds;Parent=Msa0317210-mRNA-1
chr2_4 CDS 14802623 14802723 14802623 ID=Msa0317210-mRNA-1:cds;Parent=Msa0317210-mRNA-1
chr2_4 CDS 14802487 14802522 14802487 ID=Msa0317210-mRNA-1:cds;Parent=Msa0317210-mRNA-1
chr2_4 CDS 14801290 14802024 14801290 ID=Msa0317210-mRNA-1:cds;Parent=Msa0317210-mRNA-1
chr2_4 CDS 14800606 14800822 14800606 ID=Msa0317210-mRNA-1:cds;Parent=Msa0317210-mRNA-1
chr2_4 CDS 14799797 14800359 14799797 ID=Msa0317210-mRNA-1:cds;Parent=Msa0317210-mRNA-1
chr2_4 CDS 14799633 14799701 14799633 ID=Msa0317210-mRNA-1:cds;Parent=Msa0317210-mRNA-1
Gene Sequence

>Msa0317210

ATGTCAGGTGATGAGGTTGATGCTGTTTTTGTGTCATGGGAGGAGCAAGTGATATGTCAAGAGCGTGGGAACCGTGTGATTCATTTTTACTTGAGACATATGTCGGGGGATTCGGTGCTAGCTGTTGTGGGGACTGAGAGGAGTGTGAGGCACATGATGTATGTTGTTCCTCAACAATTTTTGATGGATTATGGATCTACTAACGTTGTTTATAAATGGAGGGCAAGGAGGGAGGTTGTTGACTGGCTCAACCATTTGGTTTCGAGGAATCTATCGCACCGTAATGGTACACTGCTGGATGATTCAGCAAATGCTGCAGGACTGGGCTCTCTTGATACGTTCGCAGATGGAATCAATGCTAATAACAGAAAAATACCTGATAAACTGATTTCTAAGAAGCCGAACATTCAAAGTTCAGATATTGTTCATTCATTTGTGTATATTATGGCTGAAGAGGAAAATCACTATCTCGGTTACTTGGAAGATATGTATGAAGACAAAAAGAAACAAAAAAGGGTGAAAGTACGGTGGTTTCACCGTGGTCAGGAAGTCAAGCATGTGATTCCAGAGCTTGATCTTCATGAGGGTGAGGTTTTCATCACACCTAATGTTCAGGTGATCAGTGCTGAGTGCATCAATGGTCCTGCAACAGTTCTGACTCCTAAGCATTACGAGAAATACAAAGCTGAGTTGCTGCGTACCTCTTCATCTGAGATCCATGTATGTTCTAGGCAGCTTAAAAATAATAAGCTGAAACCCTTTGCACTTACTAAGCTGAGCGGTTATAGTAACCAGCCTATACTTTCTGGTTTGAATTGCCCTATTCTTCCCAAAAGAATGGCGGACTGTCCGAAATTTGAAGATGGTGGGAACTTCACTCAAGATGATCCTTTGAGGTCCAGCAATAAGAGGAATAGAAGTTCTGTGGAGTACTCGGTAGCTGAAAAGGGTTCTTCTGATGAGATGCCAAATGGTGTACCGAAATACCCGAGTCTGAAACTAAAACTGTCAAGAAATACAATGGGTAAGGGTATCGAACCTAAGCCTGAACTGCCTTTTAAGGTCAATGATAAGGTAGAGTTTCTCTCTCAAGATAGTGGCATTAGAGGATGCTGGTTTAGATGTACAATCTTGTATGCATCTCATAAGAAGCTCAAGGAATGGATCCCTGCACAAAGAGTGGCAAAACCTGACAAACTGGGTATGCGGTGTGACGGCCGCTTATTAGTACGACCACGCCCTCCTGAATCTGTTAAAGGTTGTACTTTCGAGATTGGAGCAGCTGTGGATGCCTGGTGTGGGGATGGATGGTGGGAAAGTATTATAACTGCTGTTGATGCTTCTGAAAATGGAACCTGTCAGGTTTATTCGCCTGGTGAAGAGAAGTTTTTATTGGCCGAAAAGAGAGACCTTCGGATTTCCCAAGACTGGATTGATAACATGTGGGTTAATATATTGGGAAAGCCGGACATTTGCAGCTTTTTATCTTCAAATCCCCCCCGCCCCAAGTTTCAAGCTAATTCTGCAGTGGTCAATGGATCTATGACTGGCAGTTCTGCAACATCTGAAAGTAAATCGCCACCAATCGCTAAAGTTGAAGTTGCTCCAAAGGTTGAGCAAAAATCATCTGGTTTGGAAGAACTTAATGGCGGTATGAAGAGAATGACTTTGTGGAAACCACCACTCCATGCCATTCATGAAGACGAGGACATCGACTCTGGTGGCTTTGATGGTGATACTGAGACTGACAATGTTGTTGATGCGTTTGATAAAGACAAGGATTGTAACTCTGGTAGTAGCAGTGATGATGATGGCTCTGACAATGACGGTGATGATGCTGATGCTGACAACACTAGAGAGGACAGCGAGGAGAATTTGGTGATGGAGGAAAAAATTGGTCGTTCTGAACCAAAACTTGATGCAGCAGGAGCAATACAGGGTAGTAGTAATACATATGCAGAGGATAATGATGGTAAAGTTCTTATTCTAGTACATTTTAGTGTATAG
Protein sequence

>Msa0317210

MSGDEVDAVFVSWEEQVICQERGNRVIHFYLRHMSGDSVLAVVGTERSVRHMMYVVPQQFLMDYGSTNVVYKWRARREVVDWLNHLVSRNLSHRNGTLLDDSANAAGLGSLDTFADGINANNRKIPDKLISKKPNIQSSDIVHSFVYIMAEEENHYLGYLEDMYEDKKKQKRVKVRWFHRGQEVKHVIPELDLHEGEVFITPNVQVISAECINGPATVLTPKHYEKYKAELLRTSSSEIHVCSRQLKNNKLKPFALTKLSGYSNQPILSGLNCPILPKRMADCPKFEDGGNFTQDDPLRSSNKRNRSSVEYSVAEKGSSDEMPNGVPKYPSLKLKLSRNTMGKGIEPKPELPFKVNDKVEFLSQDSGIRGCWFRCTILYASHKKLKEWIPAQRVAKPDKLGMRCDGRLLVRPRPPESVKGCTFEIGAAVDAWCGDGWWESIITAVDASENGTCQVYSPGEEKFLLAEKRDLRISQDWIDNMWVNILGKPDICSFLSSNPPRPKFQANSAVVNGSMTGSSATSESKSPPIAKVEVAPKVEQKSSGLEELNGGMKRMTLWKPPLHAIHEDEDIDSGGFDGDTETDNVVDAFDKDKDCNSGSSSDDDGSDNDGDDADADNTREDSEENLVMEEKIGRSEPKLDAAGAIQGSSNTYAEDNDGKVLILVHFSV*