Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319650 | XP_013463550.2 | 77.801 | 482 | 60 | 2 | 1 | 435 | 1 | 482 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319650 | sp|P33629|TBA_PRUDU | 66.370 | 449 | 100 | 2 | 1 | 398 | 1 | 449 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0319650 | Msa0328300 | 0.835411 | 1.704395e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319650 | MtrunA17_Chr2g0300491 | 76.971 | 482 | 63 | 3 | 1 | 435 | 1 | 481 | 0.0 | 722 |
| Msa0319650 | MtrunA17_Chr2g0300671 | 77.904 | 439 | 51 | 1 | 1 | 393 | 1 | 439 | 0.0 | 676 |
| Msa0319650 | MtrunA17_Chr3g0140821 | 67.742 | 434 | 89 | 2 | 1 | 383 | 1 | 434 | 0.0 | 572 |
| Msa0319650 | MtrunA17_Chr4g0054511 | 67.512 | 434 | 90 | 2 | 1 | 383 | 1 | 434 | 0.0 | 569 |
| Msa0319650 | MtrunA17_Chr1g0206881 | 65.256 | 449 | 105 | 2 | 1 | 398 | 1 | 449 | 0.0 | 569 |
| Msa0319650 | MtrunA17_Chr8g0378821 | 65.207 | 434 | 100 | 2 | 1 | 383 | 1 | 434 | 0.0 | 549 |
| Msa0319650 | MtrunA17_Chr7g0253411 | 63.825 | 434 | 106 | 2 | 1 | 383 | 1 | 434 | 0.0 | 540 |
| Msa0319650 | MtrunA17_Chr6g0461281 | 61.609 | 435 | 115 | 2 | 1 | 383 | 1 | 435 | 0.0 | 520 |
| Msa0319650 | MtrunA17_Chr3g0142731 | 32.644 | 435 | 234 | 3 | 1 | 384 | 1 | 427 | 2.59e-79 | 252 |
| Msa0319650 | MtrunA17_Chr8g0386781 | 32.414 | 435 | 233 | 4 | 1 | 384 | 1 | 425 | 8.51e-79 | 251 |
| Msa0319650 | MtrunA17_Chr4g0008361 | 32.794 | 433 | 234 | 3 | 1 | 384 | 1 | 425 | 3.93e-78 | 249 |
| Msa0319650 | MtrunA17_Chr4g0007371 | 33.333 | 435 | 231 | 4 | 1 | 384 | 1 | 427 | 5.48e-78 | 249 |
| Msa0319650 | MtrunA17_Chr4g0008401 | 33.256 | 433 | 232 | 3 | 1 | 384 | 1 | 425 | 7.31e-78 | 248 |
| Msa0319650 | MtrunA17_Chr2g0292921 | 33.025 | 433 | 233 | 3 | 1 | 384 | 1 | 425 | 8.12e-78 | 248 |
| Msa0319650 | MtrunA17_Chr4g0051631 | 33.025 | 433 | 233 | 3 | 1 | 384 | 1 | 425 | 1.32e-77 | 248 |
| Msa0319650 | MtrunA17_Chr1g0203181 | 32.564 | 433 | 235 | 3 | 1 | 384 | 1 | 425 | 4.22e-77 | 246 |
| Msa0319650 | MtrunA17_Chr7g0255791 | 32.488 | 434 | 234 | 5 | 1 | 384 | 1 | 425 | 9.00e-77 | 246 |
| Msa0319650 | MtrunA17_Chr8g0393021 | 31.718 | 454 | 248 | 5 | 1 | 403 | 1 | 443 | 2.43e-74 | 239 |
| Msa0319650 | MtrunA17_Chr3g0109241 | 74.638 | 138 | 35 | 0 | 217 | 354 | 1 | 138 | 1.28e-72 | 225 |
| Msa0319650 | MtrunA17_Chr7g0275431 | 26.577 | 444 | 256 | 9 | 2 | 382 | 3 | 439 | 1.93e-47 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319650 | AT4G14960.2 | 66.590 | 434 | 94 | 2 | 1 | 383 | 1 | 434 | 0.0 | 565 |
| Msa0319650 | AT1G50010.1 | 66.590 | 434 | 94 | 2 | 1 | 383 | 1 | 434 | 0.0 | 564 |
| Msa0319650 | AT1G04820.1 | 66.590 | 434 | 94 | 2 | 1 | 383 | 1 | 434 | 0.0 | 564 |
| Msa0319650 | AT5G19780.1 | 65.438 | 434 | 99 | 2 | 1 | 383 | 1 | 434 | 0.0 | 551 |
| Msa0319650 | AT5G19770.1 | 65.438 | 434 | 99 | 2 | 1 | 383 | 1 | 434 | 0.0 | 551 |
| Msa0319650 | AT1G64740.1 | 63.364 | 434 | 108 | 2 | 1 | 383 | 1 | 434 | 0.0 | 538 |
| Msa0319650 | AT4G14960.1 | 63.990 | 386 | 88 | 2 | 1 | 335 | 1 | 386 | 2.03e-167 | 477 |
| Msa0319650 | AT1G75780.1 | 32.488 | 434 | 235 | 3 | 1 | 384 | 1 | 426 | 8.65e-81 | 256 |
| Msa0319650 | AT5G62690.1 | 33.025 | 433 | 233 | 3 | 1 | 384 | 1 | 425 | 2.01e-79 | 253 |
| Msa0319650 | AT5G62700.1 | 33.025 | 433 | 233 | 3 | 1 | 384 | 1 | 425 | 2.01e-79 | 253 |
| Msa0319650 | AT1G20010.1 | 32.488 | 434 | 235 | 3 | 1 | 384 | 1 | 426 | 1.34e-78 | 251 |
| Msa0319650 | AT2G29550.1 | 32.273 | 440 | 239 | 4 | 1 | 390 | 1 | 431 | 1.39e-77 | 248 |
| Msa0319650 | AT4G20890.1 | 33.025 | 433 | 233 | 3 | 1 | 384 | 1 | 425 | 1.88e-77 | 248 |
| Msa0319650 | AT5G12250.1 | 32.488 | 434 | 234 | 5 | 1 | 384 | 1 | 425 | 4.65e-77 | 247 |
| Msa0319650 | AT5G23860.2 | 32.564 | 433 | 235 | 3 | 1 | 384 | 1 | 425 | 5.40e-77 | 246 |
| Msa0319650 | AT5G23860.1 | 32.564 | 433 | 235 | 3 | 1 | 384 | 1 | 425 | 5.40e-77 | 246 |
| Msa0319650 | AT5G44340.1 | 33.025 | 433 | 233 | 4 | 1 | 384 | 1 | 425 | 8.44e-76 | 243 |
| Msa0319650 | AT5G05620.1 | 27.027 | 444 | 254 | 9 | 2 | 382 | 3 | 439 | 3.43e-48 | 171 |
| Msa0319650 | AT3G61650.1 | 26.577 | 444 | 256 | 9 | 2 | 382 | 3 | 439 | 4.51e-47 | 169 |
Find 120 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATAGGATCTTGGTTATTT+CGG | 0.201136 | 2_4:-19488699 | Msa0319650:CDS |
| CAATGAGCTTCAAACCAATT+TGG | 0.222605 | 2_4:-19489370 | Msa0319650:CDS |
| TATAGGATCTTGGTTATTTC+GGG | 0.228858 | 2_4:-19488698 | Msa0319650:CDS |
| GGCGGCACAGGCTCTGGTTT+GGG | 0.275831 | 2_4:-19489776 | Msa0319650:CDS |
| AGTTTCTTAGCAGAGATAAA+AGG | 0.298640 | 2_4:+19489306 | None:intergenic |
| CATCCTCCAACTGTTGTTCC+TGG | 0.304673 | 2_4:-19489054 | Msa0319650:CDS |
| CGTCCCTCACTTCCTCTTTG+AGG | 0.305182 | 2_4:-19489419 | Msa0319650:CDS |
| TGGCGGCACAGGCTCTGGTT+TGG | 0.323607 | 2_4:-19489777 | Msa0319650:CDS |
| CTGCCTCCAACATGGCATTC+AGG | 0.335720 | 2_4:-19490314 | Msa0319650:intron |
| CGCCCTACTCTAGTGATACT+TGG | 0.345169 | 2_4:-19488819 | Msa0319650:CDS |
| AAATCAAACCCTTCAATTTG+TGG | 0.348538 | 2_4:-19489115 | Msa0319650:CDS |
| GCTAAGTGCAACCCTCGATA+TGG | 0.361945 | 2_4:-19489219 | Msa0319650:CDS |
| AATGCCGTGGGTGGCGGCAC+AGG | 0.365331 | 2_4:-19489788 | Msa0319650:CDS |
| GAACGGCGTTGTAGGGTTCT+AGG | 0.365692 | 2_4:+19489660 | None:intergenic |
| TCTTGTTGTTTGATGTATCA+TGG | 0.371239 | 2_4:-19489186 | Msa0319650:CDS |
| CCTATGAAAAGGAACCAAAT+TGG | 0.388480 | 2_4:+19489356 | None:intergenic |
| GTTTCTTAGCAGAGATAAAA+GGG | 0.395059 | 2_4:+19489307 | None:intergenic |
| ATGGAAGAAGGAGGCTCTAT+AGG | 0.407680 | 2_4:-19488715 | Msa0319650:CDS |
| CTCTTATTGTTCAATGCCGT+GGG | 0.422569 | 2_4:-19489800 | Msa0319650:CDS |
| CTGGTATGTGTGTGAGGGTA+TGG | 0.423994 | 2_4:-19488908 | Msa0319650:CDS |
| CATATGAGGTAAGCATGAAA+TGG | 0.424949 | 2_4:+19489331 | None:intergenic |
| GGTTGAAAGAACGGCGTTGT+AGG | 0.428849 | 2_4:+19489652 | None:intergenic |
| AAACCCTTCAATTTGTGGAT+TGG | 0.430531 | 2_4:-19489110 | Msa0319650:CDS |
| GTGGGTGGCGGCACAGGCTC+TGG | 0.439726 | 2_4:-19489782 | Msa0319650:CDS |
| TCTCCTTGAACATGCTGATA+TGG | 0.440898 | 2_4:-19489624 | Msa0319650:CDS |
| GGCATTTCCGACCTGGATAC+CGG | 0.443360 | 2_4:+19490351 | None:intergenic |
| AACATGGGGAGATGGATATA+CGG | 0.445102 | 2_4:+19489694 | None:intergenic |
| TTGTTCAATGCCGTGGGTGG+CGG | 0.454553 | 2_4:-19489794 | Msa0319650:CDS |
| TGGTTTGGGTTCGCTTCTGT+TGG | 0.457297 | 2_4:-19489762 | Msa0319650:CDS |
| CATCGGTGAGGCCGGTATCC+AGG | 0.460778 | 2_4:-19490362 | Msa0319650:CDS |
| TCCAGGTCGGAAATGCCTGC+TGG | 0.462149 | 2_4:-19490345 | Msa0319650:CDS |
| TGCTCTCGAGGAGGAGTATG+AGG | 0.466608 | 2_4:-19488848 | Msa0319650:CDS |
| TCTCAATTGTCTTATCTCTC+AGG | 0.467439 | 2_4:-19489525 | Msa0319650:intron |
| GGGTTCAAGATCAACATATA+CGG | 0.471868 | 2_4:+19490120 | None:intergenic |
| CCCAGCAGGCATTTCCGACC+TGG | 0.472516 | 2_4:+19490344 | None:intergenic |
| ATCGAACTTATGATCAATCC+TGG | 0.473677 | 2_4:+19488960 | None:intergenic |
| TCTCTTATTGTTCAATGCCG+TGG | 0.476843 | 2_4:-19489801 | Msa0319650:CDS |
| CACTTAGCCATCATGGAAGA+AGG | 0.479049 | 2_4:+19489234 | None:intergenic |
| AAGGAGGCTCTATAGGATCT+TGG | 0.485514 | 2_4:-19488708 | Msa0319650:CDS |
| TTATTTCGGGAAGGATTATG+AGG | 0.486092 | 2_4:-19488685 | None:intergenic |
| CTGGTATGTGACCGAGGGTA+TGG | 0.494537 | 2_4:-19488734 | Msa0319650:CDS |
| CGGCCATATCAGCATGTTCA+AGG | 0.495192 | 2_4:+19489621 | None:intergenic |
| AGAGATAAAAGGGGCATATG+AGG | 0.495739 | 2_4:+19489317 | None:intergenic |
| AACACCAATCCACAAATTGA+AGG | 0.502009 | 2_4:+19489106 | None:intergenic |
| ATGAAATGGGCCCTATGAAA+AGG | 0.502103 | 2_4:+19489345 | None:intergenic |
| TCGATCCACATCGGTGAGGC+CGG | 0.507704 | 2_4:-19490370 | Msa0319650:CDS |
| GAGCATCTCTCTGCTGAATA+CGG | 0.511234 | 2_4:-19489740 | Msa0319650:CDS |
| GTTGTAGGGTTCTAGGACAG+AGG | 0.514608 | 2_4:+19489667 | None:intergenic |
| GCCTCCTTCTTCCATACCCT+CGG | 0.514684 | 2_4:+19488723 | None:intergenic |
| CCTTACATCGTCAATGGCAG+AGG | 0.517131 | 2_4:+19490099 | None:intergenic |
| ATATGAGGTAAGCATGAAAT+GGG | 0.521961 | 2_4:+19489332 | None:intergenic |
| GTTGAAAGAACGGCGTTGTA+GGG | 0.524230 | 2_4:+19489653 | None:intergenic |
| CCAGTGCACAAAAGCACGCT+TGG | 0.524306 | 2_4:+19488927 | None:intergenic |
| GTGATCTTGCCAAGGTGCAG+AGG | 0.524868 | 2_4:-19489029 | Msa0319650:CDS |
| GAGGTTGAAACATGGGGAGA+TGG | 0.525998 | 2_4:+19489686 | None:intergenic |
| AAGTGGGTCGCTGAATATCA+AGG | 0.529110 | 2_4:+19489555 | None:intergenic |
| AGGGTTGCACTTAGCCATCA+TGG | 0.529496 | 2_4:+19489227 | None:intergenic |
| TCGACGGTACTCTTCCCATC+AGG | 0.538831 | 2_4:+19490208 | None:intergenic |
| ACACCAATCCACAAATTGAA+GGG | 0.539639 | 2_4:+19489107 | None:intergenic |
| GTGACCGAGGGTATGGAAGA+AGG | 0.542630 | 2_4:-19488727 | Msa0319650:CDS |
| AGAAGGATTAAAAGCACGAT+TGG | 0.544307 | 2_4:+19489251 | None:intergenic |
| GAAGATTTCTCCTCCGTCGA+CGG | 0.545268 | 2_4:+19490192 | None:intergenic |
| CCAGGTCGGAAATGCCTGCT+GGG | 0.545543 | 2_4:-19490344 | Msa0319650:CDS |
| ACCGGTCCTTACATCGTCAA+TGG | 0.546563 | 2_4:+19490093 | None:intergenic |
| GTGTGTGAGGGTATGGAAGA+AGG | 0.547203 | 2_4:-19488901 | Msa0319650:CDS |
| TCCTGGTGGTGATCTTGCCA+AGG | 0.548720 | 2_4:-19489037 | Msa0319650:CDS |
| TTCCCAAGTATCACTAGAGT+AGG | 0.553967 | 2_4:+19488816 | None:intergenic |
| GAGAGCACTGGTTGAAAGAA+CGG | 0.554079 | 2_4:+19489643 | None:intergenic |
| AGAGCCTGTGCCGCCACCCA+CGG | 0.555285 | 2_4:+19489784 | None:intergenic |
| CCACCAGGAACAACAGTTGG+AGG | 0.556528 | 2_4:+19489051 | None:intergenic |
| TCACCACCAGGAACAACAGT+TGG | 0.562091 | 2_4:+19489048 | None:intergenic |
| GGAAAACACTTGAGCAACAC+TGG | 0.569938 | 2_4:+19488981 | None:intergenic |
| GTACCTGAATGCCATGTTGG+AGG | 0.571607 | 2_4:+19490311 | None:intergenic |
| GGATCTTGGTTATTTCGGGA+AGG | 0.572882 | 2_4:-19488694 | Msa0319650:CDS |
| TGATCTCAGCAGTAGAAAGC+TGG | 0.578307 | 2_4:+19489274 | None:intergenic |
| TGTGCACTGGTATGTGTGTG+AGG | 0.578974 | 2_4:-19488914 | Msa0319650:CDS |
| CAGCAGTAGAAAGCTGGTCG+TGG | 0.579729 | 2_4:+19489280 | None:intergenic |
| TGAGGATCTTGCTGCTCTCG+AGG | 0.580308 | 2_4:-19488860 | Msa0319650:CDS |
| TGATCTTGCCAAGGTGCAGA+GGG | 0.583911 | 2_4:-19489028 | Msa0319650:CDS |
| TCCTACAGCCCTCTGCACCT+TGG | 0.585062 | 2_4:+19489020 | None:intergenic |
| GCCAAGGTGCAGAGGGCTGT+AGG | 0.585778 | 2_4:-19489021 | Msa0319650:CDS |
| GTGCACTGGTATGTGTGTGA+GGG | 0.593925 | 2_4:-19488913 | Msa0319650:CDS |
| TTATTGTTCAATGCCGTGGG+TGG | 0.597101 | 2_4:-19489797 | Msa0319650:CDS |
| GGAAGAAGGTGAGTTATCAC+AGG | 0.598693 | 2_4:-19488887 | Msa0319650:CDS |
| CCTCCAACTGTTGTTCCTGG+TGG | 0.599359 | 2_4:-19489051 | Msa0319650:CDS |
| TGTTCAACTAAGTACAAGGC+AGG | 0.599372 | 2_4:-19489087 | Msa0319650:CDS |
| TAGGACAGAGGTTGAAACAT+GGG | 0.600161 | 2_4:+19489679 | None:intergenic |
| GAGGCAGTAAAGTTCCCAGC+AGG | 0.601634 | 2_4:+19490330 | None:intergenic |
| CTAGGACAGAGGTTGAAACA+TGG | 0.604024 | 2_4:+19489678 | None:intergenic |
| GCCCTACTCTAGTGATACTT+GGG | 0.605167 | 2_4:-19488818 | Msa0319650:CDS |
| TGCTGCATCAAACCTCAAAG+AGG | 0.605871 | 2_4:+19489407 | None:intergenic |
| CAAACCTCAAAGAGGAAGTG+AGG | 0.608412 | 2_4:+19489415 | None:intergenic |
| AGCATGTTCAAGGAGAGCAC+TGG | 0.608599 | 2_4:+19489631 | None:intergenic |
| TAGGTACCTGAATGCCATGT+TGG | 0.610013 | 2_4:+19490308 | None:intergenic |
| TCCCAAGTATCACTAGAGTA+GGG | 0.611067 | 2_4:+19488817 | None:intergenic |
| GGATTCATTGTCAAGAAGCA+CGG | 0.612421 | 2_4:+19489601 | None:intergenic |
| GAACTTTACTGCCTCCAACA+TGG | 0.619654 | 2_4:-19490322 | Msa0319650:CDS |
| AGATCAACATATACGGCGCG+TGG | 0.620454 | 2_4:+19490127 | None:intergenic |
| GGATACCGGCCTCACCGATG+TGG | 0.621860 | 2_4:+19490365 | None:intergenic |
| TGAGTTATCACAGGCTCGTG+AGG | 0.622873 | 2_4:-19488878 | Msa0319650:CDS |
| GTACTTGCAAATGTCATAGA+CGG | 0.630460 | 2_4:+19489580 | None:intergenic |
| AAACCTCAAAGAGGAAGTGA+GGG | 0.631722 | 2_4:+19489416 | None:intergenic |
| TTGGTGTTCAACTAAGTACA+AGG | 0.635789 | 2_4:-19489091 | Msa0319650:CDS |
| AGTGGGTCGCTGAATATCAA+GGG | 0.652184 | 2_4:+19489556 | None:intergenic |
| GGTGAGGCCGGTATCCAGGT+CGG | 0.654488 | 2_4:-19490358 | Msa0319650:CDS |
| GTGCACTGGTATGTGACCGA+GGG | 0.657837 | 2_4:-19488739 | Msa0319650:CDS |
| TGTGCACTGGTATGTGACCG+AGG | 0.659820 | 2_4:-19488740 | Msa0319650:CDS |
| TTTCTTAGCAGAGATAAAAG+GGG | 0.662983 | 2_4:+19489308 | None:intergenic |
| GGGAAGAGTACCGTCGACGG+AGG | 0.667125 | 2_4:-19490202 | Msa0319650:CDS |
| ACCTTGGCAAGATCACCACC+AGG | 0.670200 | 2_4:+19489036 | None:intergenic |
| AGGACAGAGGTTGAAACATG+GGG | 0.671739 | 2_4:+19489680 | None:intergenic |
| CTTACATCGTCAATGGCAGA+GGG | 0.674351 | 2_4:+19490100 | None:intergenic |
| GGATCTTGCTGCTCTCGAGG+AGG | 0.675941 | 2_4:-19488857 | Msa0319650:CDS |
| GATGGGAAGAGTACCGTCGA+CGG | 0.679390 | 2_4:-19490205 | Msa0319650:CDS |
| GAGTGTATTTCGATCCACAT+CGG | 0.682792 | 2_4:-19490379 | Msa0319650:CDS |
| TGATATTGTGCATAAAGATG+CGG | 0.695168 | 2_4:-19489163 | Msa0319650:CDS |
| GATAACTGTGCTGATCTGCA+AGG | 0.695611 | 2_4:-19489824 | Msa0319650:CDS |
| ACCGAGGGTATGGAAGAAGG+AGG | 0.697599 | 2_4:-19488724 | Msa0319650:CDS |
| AGTTGAAAGTGATGACTGCG+AGG | 0.710481 | 2_4:-19488794 | Msa0319650:CDS |
| TATTTCGATCCACATCGGTG+AGG | 0.756255 | 2_4:-19490374 | Msa0319650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAATAAGTTTTAAGATT+GGG | + | chr2_4:19488797-19488816 | None:intergenic | 15.0% |
| !!! | AGAAAAATAAGTTTTAAGAT+TGG | + | chr2_4:19488798-19488817 | None:intergenic | 15.0% |
| !!! | AAATTTACTCAATATTGATT+AGG | - | chr2_4:19489571-19489590 | Msa0319650:CDS | 15.0% |
| !!! | GAAAAATAAGTTTTAAGATT+GGG | + | chr2_4:19488797-19488816 | None:intergenic | 15.0% |
| !!! | AGAAAAATAAGTTTTAAGAT+TGG | + | chr2_4:19488798-19488817 | None:intergenic | 15.0% |
| !!! | AAATTTACTCAATATTGATT+AGG | - | chr2_4:19489571-19489590 | Msa0319650:CDS | 15.0% |
| !!! | AATAAGTTTTAAGATTGGGT+AGG | + | chr2_4:19488793-19488812 | None:intergenic | 25.0% |
| ! | TCTTAACTATCGTTCAATAA+TGG | - | chr2_4:19488827-19488846 | Msa0319650:CDS | 25.0% |
| !! | CAATTGAGATTTTTGTAAGT+GGG | + | chr2_4:19489536-19489555 | None:intergenic | 25.0% |
| !! | ACAATTGAGATTTTTGTAAG+TGG | + | chr2_4:19489537-19489556 | None:intergenic | 25.0% |
| !!! | TGATTTTGATTTGATTGTGT+AGG | - | chr2_4:19489624-19489643 | Msa0319650:CDS | 25.0% |
| !!! | AATAAGTTTTAAGATTGGGT+AGG | + | chr2_4:19488793-19488812 | None:intergenic | 25.0% |
| ! | TCTTAACTATCGTTCAATAA+TGG | - | chr2_4:19488827-19488846 | Msa0319650:CDS | 25.0% |
| !! | CAATTGAGATTTTTGTAAGT+GGG | + | chr2_4:19489536-19489555 | None:intergenic | 25.0% |
| !! | ACAATTGAGATTTTTGTAAG+TGG | + | chr2_4:19489537-19489556 | None:intergenic | 25.0% |
| !!! | TGATTTTGATTTGATTGTGT+AGG | - | chr2_4:19489624-19489643 | Msa0319650:CDS | 25.0% |
| !! | TTATGATTTTTCAGCCTGAT+GGG | - | chr2_4:19488850-19488869 | Msa0319650:CDS | 30.0% |
| !! | TTTTTCAGCGAAACTTTAAC+TGG | - | chr2_4:19488912-19488931 | Msa0319650:CDS | 30.0% |
| ATGATTGATTGTGATTCAGT+TGG | - | chr2_4:19489179-19489198 | Msa0319650:CDS | 30.0% | |
| TGATTGATTGTGATTCAGTT+GGG | - | chr2_4:19489180-19489199 | Msa0319650:CDS | 30.0% | |
| TACGGTAAAAAAATCAAGCT+TGG | - | chr2_4:19489350-19489369 | Msa0319650:CDS | 30.0% | |
| TAAAAAAATCAAGCTTGGCT+TGG | - | chr2_4:19489355-19489374 | Msa0319650:CDS | 30.0% | |
| !! | CAATTTGGTTCCTTTTCATA+GGG | - | chr2_4:19489717-19489736 | Msa0319650:CDS | 30.0% |
| ATATGAGGTAAGCATGAAAT+GGG | + | chr2_4:19489743-19489762 | None:intergenic | 30.0% | |
| TTTCTTAGCAGAGATAAAAG+GGG | + | chr2_4:19489767-19489786 | None:intergenic | 30.0% | |
| GTTTCTTAGCAGAGATAAAA+GGG | + | chr2_4:19489768-19489787 | None:intergenic | 30.0% | |
| AGTTTCTTAGCAGAGATAAA+AGG | + | chr2_4:19489769-19489788 | None:intergenic | 30.0% | |
| ! | TTTTAATCCTTCTTCCATGA+TGG | - | chr2_4:19489831-19489850 | Msa0319650:CDS | 30.0% |
| !!! | AGAAGTATTTTCCATATCGA+GGG | + | chr2_4:19489867-19489886 | None:intergenic | 30.0% |
| !! | TCTTGTTGTTTGATGTATCA+TGG | - | chr2_4:19489886-19489905 | Msa0319650:intron | 30.0% |
| TGATATTGTGCATAAAGATG+CGG | - | chr2_4:19489909-19489928 | Msa0319650:intron | 30.0% | |
| AAATCAAACCCTTCAATTTG+TGG | - | chr2_4:19489957-19489976 | Msa0319650:intron | 30.0% | |
| CTATAGGATCTTGGTTATTT+CGG | - | chr2_4:19490373-19490392 | Msa0319650:CDS | 30.0% | |
| ! | TATAGGATCTTGGTTATTTC+GGG | - | chr2_4:19490374-19490393 | Msa0319650:CDS | 30.0% |
| !! | TTATGATTTTTCAGCCTGAT+GGG | - | chr2_4:19488850-19488869 | Msa0319650:CDS | 30.0% |
| !! | TTTTTCAGCGAAACTTTAAC+TGG | - | chr2_4:19488912-19488931 | Msa0319650:CDS | 30.0% |
| ATGATTGATTGTGATTCAGT+TGG | - | chr2_4:19489179-19489198 | Msa0319650:CDS | 30.0% | |
| TGATTGATTGTGATTCAGTT+GGG | - | chr2_4:19489180-19489199 | Msa0319650:CDS | 30.0% | |
| TACGGTAAAAAAATCAAGCT+TGG | - | chr2_4:19489350-19489369 | Msa0319650:CDS | 30.0% | |
| TAAAAAAATCAAGCTTGGCT+TGG | - | chr2_4:19489355-19489374 | Msa0319650:CDS | 30.0% | |
| !! | CAATTTGGTTCCTTTTCATA+GGG | - | chr2_4:19489717-19489736 | Msa0319650:CDS | 30.0% |
| ATATGAGGTAAGCATGAAAT+GGG | + | chr2_4:19489743-19489762 | None:intergenic | 30.0% | |
| TTTCTTAGCAGAGATAAAAG+GGG | + | chr2_4:19489767-19489786 | None:intergenic | 30.0% | |
| GTTTCTTAGCAGAGATAAAA+GGG | + | chr2_4:19489768-19489787 | None:intergenic | 30.0% | |
| AGTTTCTTAGCAGAGATAAA+AGG | + | chr2_4:19489769-19489788 | None:intergenic | 30.0% | |
| ! | TTTTAATCCTTCTTCCATGA+TGG | - | chr2_4:19489831-19489850 | Msa0319650:CDS | 30.0% |
| !!! | AGAAGTATTTTCCATATCGA+GGG | + | chr2_4:19489867-19489886 | None:intergenic | 30.0% |
| !! | TCTTGTTGTTTGATGTATCA+TGG | - | chr2_4:19489886-19489905 | Msa0319650:intron | 30.0% |
| TGATATTGTGCATAAAGATG+CGG | - | chr2_4:19489909-19489928 | Msa0319650:intron | 30.0% | |
| AAATCAAACCCTTCAATTTG+TGG | - | chr2_4:19489957-19489976 | Msa0319650:intron | 30.0% | |
| CTATAGGATCTTGGTTATTT+CGG | - | chr2_4:19490373-19490392 | Msa0319650:CDS | 30.0% | |
| ! | TATAGGATCTTGGTTATTTC+GGG | - | chr2_4:19490374-19490393 | Msa0319650:CDS | 30.0% |
| !! | GTTATGATTTTTCAGCCTGA+TGG | - | chr2_4:19488849-19488868 | Msa0319650:CDS | 35.0% |
| GGGTTCAAGATCAACATATA+CGG | + | chr2_4:19488955-19488974 | None:intergenic | 35.0% | |
| GATCAAATCACGTCATAATG+TGG | + | chr2_4:19489107-19489126 | None:intergenic | 35.0% | |
| AAACATTATCCCACTAAGTG+GGG | + | chr2_4:19489141-19489160 | None:intergenic | 35.0% | |
| CAAACATTATCCCACTAAGT+GGG | + | chr2_4:19489142-19489161 | None:intergenic | 35.0% | |
| TCAAACATTATCCCACTAAG+TGG | + | chr2_4:19489143-19489162 | None:intergenic | 35.0% | |
| GAAGATTGTTGATCTTTGCT+TGG | - | chr2_4:19489205-19489224 | Msa0319650:CDS | 35.0% | |
| GTACTTGCAAATGTCATAGA+CGG | + | chr2_4:19489495-19489514 | None:intergenic | 35.0% | |
| TCTCAATTGTCTTATCTCTC+AGG | - | chr2_4:19489547-19489566 | Msa0319650:CDS | 35.0% | |
| CAATGAGCTTCAAACCAATT+TGG | - | chr2_4:19489702-19489721 | Msa0319650:CDS | 35.0% | |
| CCTATGAAAAGGAACCAAAT+TGG | + | chr2_4:19489719-19489738 | None:intergenic | 35.0% | |
| !! | CCAATTTGGTTCCTTTTCAT+AGG | - | chr2_4:19489716-19489735 | Msa0319650:CDS | 35.0% |
| CATATGAGGTAAGCATGAAA+TGG | + | chr2_4:19489744-19489763 | None:intergenic | 35.0% | |
| ! | AGAAGGATTAAAAGCACGAT+TGG | + | chr2_4:19489824-19489843 | None:intergenic | 35.0% |
| !!! | GAGAAGTATTTTCCATATCG+AGG | + | chr2_4:19489868-19489887 | None:intergenic | 35.0% |
| AAACCCTTCAATTTGTGGAT+TGG | - | chr2_4:19489962-19489981 | Msa0319650:intron | 35.0% | |
| ACACCAATCCACAAATTGAA+GGG | + | chr2_4:19489968-19489987 | None:intergenic | 35.0% | |
| AACACCAATCCACAAATTGA+AGG | + | chr2_4:19489969-19489988 | None:intergenic | 35.0% | |
| ! | TTGGTGTTCAACTAAGTACA+AGG | - | chr2_4:19489981-19490000 | Msa0319650:intron | 35.0% |
| ATCGAACTTATGATCAATCC+TGG | + | chr2_4:19490115-19490134 | None:intergenic | 35.0% | |
| !! | GTTATGATTTTTCAGCCTGA+TGG | - | chr2_4:19488849-19488868 | Msa0319650:CDS | 35.0% |
| GGGTTCAAGATCAACATATA+CGG | + | chr2_4:19488955-19488974 | None:intergenic | 35.0% | |
| GATCAAATCACGTCATAATG+TGG | + | chr2_4:19489107-19489126 | None:intergenic | 35.0% | |
| AAACATTATCCCACTAAGTG+GGG | + | chr2_4:19489141-19489160 | None:intergenic | 35.0% | |
| CAAACATTATCCCACTAAGT+GGG | + | chr2_4:19489142-19489161 | None:intergenic | 35.0% | |
| TCAAACATTATCCCACTAAG+TGG | + | chr2_4:19489143-19489162 | None:intergenic | 35.0% | |
| GAAGATTGTTGATCTTTGCT+TGG | - | chr2_4:19489205-19489224 | Msa0319650:CDS | 35.0% | |
| GTACTTGCAAATGTCATAGA+CGG | + | chr2_4:19489495-19489514 | None:intergenic | 35.0% | |
| TCTCAATTGTCTTATCTCTC+AGG | - | chr2_4:19489547-19489566 | Msa0319650:CDS | 35.0% | |
| CAATGAGCTTCAAACCAATT+TGG | - | chr2_4:19489702-19489721 | Msa0319650:CDS | 35.0% | |
| CCTATGAAAAGGAACCAAAT+TGG | + | chr2_4:19489719-19489738 | None:intergenic | 35.0% | |
| !! | CCAATTTGGTTCCTTTTCAT+AGG | - | chr2_4:19489716-19489735 | Msa0319650:CDS | 35.0% |
| CATATGAGGTAAGCATGAAA+TGG | + | chr2_4:19489744-19489763 | None:intergenic | 35.0% | |
| ! | AGAAGGATTAAAAGCACGAT+TGG | + | chr2_4:19489824-19489843 | None:intergenic | 35.0% |
| !!! | GAGAAGTATTTTCCATATCG+AGG | + | chr2_4:19489868-19489887 | None:intergenic | 35.0% |
| AAACCCTTCAATTTGTGGAT+TGG | - | chr2_4:19489962-19489981 | Msa0319650:intron | 35.0% | |
| ACACCAATCCACAAATTGAA+GGG | + | chr2_4:19489968-19489987 | None:intergenic | 35.0% | |
| AACACCAATCCACAAATTGA+AGG | + | chr2_4:19489969-19489988 | None:intergenic | 35.0% | |
| ! | TTGGTGTTCAACTAAGTACA+AGG | - | chr2_4:19489981-19490000 | Msa0319650:intron | 35.0% |
| ATCGAACTTATGATCAATCC+TGG | + | chr2_4:19490115-19490134 | None:intergenic | 35.0% | |
| GAGTGTATTTCGATCCACAT+CGG | - | chr2_4:19488693-19488712 | Msa0319650:CDS | 40.0% | |
| TTGGCTGTGATGAATTGATC+GGG | + | chr2_4:19489026-19489045 | None:intergenic | 40.0% | |
| GTTGGCTGTGATGAATTGAT+CGG | + | chr2_4:19489027-19489046 | None:intergenic | 40.0% | |
| TTGATTGTGATTCAGTTGGG+AGG | - | chr2_4:19489183-19489202 | Msa0319650:CDS | 40.0% | |
| TCTCTTATTGTTCAATGCCG+TGG | - | chr2_4:19489271-19489290 | Msa0319650:CDS | 40.0% | |
| CTCTTATTGTTCAATGCCGT+GGG | - | chr2_4:19489272-19489291 | Msa0319650:CDS | 40.0% | |
| AACATGGGGAGATGGATATA+CGG | + | chr2_4:19489381-19489400 | None:intergenic | 40.0% | |
| TAGGACAGAGGTTGAAACAT+GGG | + | chr2_4:19489396-19489415 | None:intergenic | 40.0% | |
| TCTCCTTGAACATGCTGATA+TGG | - | chr2_4:19489448-19489467 | Msa0319650:intron | 40.0% | |
| GGATTCATTGTCAAGAAGCA+CGG | + | chr2_4:19489474-19489493 | None:intergenic | 40.0% | |
| AAACCTCAAAGAGGAAGTGA+GGG | + | chr2_4:19489659-19489678 | None:intergenic | 40.0% | |
| ATGAAATGGGCCCTATGAAA+AGG | + | chr2_4:19489730-19489749 | None:intergenic | 40.0% | |
| ! | AGAGATAAAAGGGGCATATG+AGG | + | chr2_4:19489758-19489777 | None:intergenic | 40.0% |
| TGTTCAACTAAGTACAAGGC+AGG | - | chr2_4:19489985-19490004 | Msa0319650:intron | 40.0% | |
| TCCCAAGTATCACTAGAGTA+GGG | + | chr2_4:19490258-19490277 | None:intergenic | 40.0% | |
| TTCCCAAGTATCACTAGAGT+AGG | + | chr2_4:19490259-19490278 | None:intergenic | 40.0% | |
| ! | ATAAGCGTTCTTTTGTGCAC+TGG | - | chr2_4:19490319-19490338 | Msa0319650:CDS | 40.0% |
| GAGTGTATTTCGATCCACAT+CGG | - | chr2_4:19488693-19488712 | Msa0319650:CDS | 40.0% | |
| TTGGCTGTGATGAATTGATC+GGG | + | chr2_4:19489026-19489045 | None:intergenic | 40.0% | |
| GTTGGCTGTGATGAATTGAT+CGG | + | chr2_4:19489027-19489046 | None:intergenic | 40.0% | |
| TTGATTGTGATTCAGTTGGG+AGG | - | chr2_4:19489183-19489202 | Msa0319650:CDS | 40.0% | |
| TCTCTTATTGTTCAATGCCG+TGG | - | chr2_4:19489271-19489290 | Msa0319650:CDS | 40.0% | |
| CTCTTATTGTTCAATGCCGT+GGG | - | chr2_4:19489272-19489291 | Msa0319650:CDS | 40.0% | |
| AACATGGGGAGATGGATATA+CGG | + | chr2_4:19489381-19489400 | None:intergenic | 40.0% | |
| TAGGACAGAGGTTGAAACAT+GGG | + | chr2_4:19489396-19489415 | None:intergenic | 40.0% | |
| TCTCCTTGAACATGCTGATA+TGG | - | chr2_4:19489448-19489467 | Msa0319650:intron | 40.0% | |
| GGATTCATTGTCAAGAAGCA+CGG | + | chr2_4:19489474-19489493 | None:intergenic | 40.0% | |
| AAACCTCAAAGAGGAAGTGA+GGG | + | chr2_4:19489659-19489678 | None:intergenic | 40.0% | |
| ATGAAATGGGCCCTATGAAA+AGG | + | chr2_4:19489730-19489749 | None:intergenic | 40.0% | |
| ! | AGAGATAAAAGGGGCATATG+AGG | + | chr2_4:19489758-19489777 | None:intergenic | 40.0% |
| TGTTCAACTAAGTACAAGGC+AGG | - | chr2_4:19489985-19490004 | Msa0319650:intron | 40.0% | |
| TCCCAAGTATCACTAGAGTA+GGG | + | chr2_4:19490258-19490277 | None:intergenic | 40.0% | |
| TTCCCAAGTATCACTAGAGT+AGG | + | chr2_4:19490259-19490278 | None:intergenic | 40.0% | |
| ! | ATAAGCGTTCTTTTGTGCAC+TGG | - | chr2_4:19490319-19490338 | Msa0319650:CDS | 40.0% |
| TATTTCGATCCACATCGGTG+AGG | - | chr2_4:19488698-19488717 | Msa0319650:CDS | 45.0% | |
| GAACTTTACTGCCTCCAACA+TGG | - | chr2_4:19488750-19488769 | Msa0319650:CDS | 45.0% | |
| TAGGTACCTGAATGCCATGT+TGG | + | chr2_4:19488767-19488786 | None:intergenic | 45.0% | |
| ACATGGCATTCAGGTACCTA+CGG | - | chr2_4:19488767-19488786 | Msa0319650:CDS | 45.0% | |
| ! | TTTAAGATTGGGTAGGCCGT+AGG | + | chr2_4:19488786-19488805 | None:intergenic | 45.0% |
| CTTACATCGTCAATGGCAGA+GGG | + | chr2_4:19488975-19488994 | None:intergenic | 45.0% | |
| CTGTGATGAATTGATCGGGT+TGG | + | chr2_4:19489022-19489041 | None:intergenic | 45.0% | |
| CAATTCATCACAGCCAACGA+AGG | - | chr2_4:19489029-19489048 | Msa0319650:CDS | 45.0% | |
| ATTATCCCACTAAGTGGGGT+CGG | + | chr2_4:19489137-19489156 | None:intergenic | 45.0% | |
| ! | GATAACTGTGCTGATCTGCA+AGG | - | chr2_4:19489248-19489267 | Msa0319650:CDS | 45.0% |
| TTATTGTTCAATGCCGTGGG+TGG | - | chr2_4:19489275-19489294 | Msa0319650:CDS | 45.0% | |
| GAGCATCTCTCTGCTGAATA+CGG | - | chr2_4:19489332-19489351 | Msa0319650:CDS | 45.0% | |
| AGGACAGAGGTTGAAACATG+GGG | + | chr2_4:19489395-19489414 | None:intergenic | 45.0% | |
| CTAGGACAGAGGTTGAAACA+TGG | + | chr2_4:19489397-19489416 | None:intergenic | 45.0% | |
| GTTGAAAGAACGGCGTTGTA+GGG | + | chr2_4:19489422-19489441 | None:intergenic | 45.0% | |
| !! | GAGAGCACTGGTTGAAAGAA+CGG | + | chr2_4:19489432-19489451 | None:intergenic | 45.0% |
| AGTGGGTCGCTGAATATCAA+GGG | + | chr2_4:19489519-19489538 | None:intergenic | 45.0% | |
| AAGTGGGTCGCTGAATATCA+AGG | + | chr2_4:19489520-19489539 | None:intergenic | 45.0% | |
| CAAACCTCAAAGAGGAAGTG+AGG | + | chr2_4:19489660-19489679 | None:intergenic | 45.0% | |
| TGCTGCATCAAACCTCAAAG+AGG | + | chr2_4:19489668-19489687 | None:intergenic | 45.0% | |
| TGATCTCAGCAGTAGAAAGC+TGG | + | chr2_4:19489801-19489820 | None:intergenic | 45.0% | |
| CACTTAGCCATCATGGAAGA+AGG | + | chr2_4:19489841-19489860 | None:intergenic | 45.0% | |
| GGAAAACACTTGAGCAACAC+TGG | + | chr2_4:19490094-19490113 | None:intergenic | 45.0% | |
| !! | GTGTTGCTCAAGTGTTTTCC+AGG | - | chr2_4:19490094-19490113 | Msa0319650:intron | 45.0% |
| GGAAGAAGGTGAGTTATCAC+AGG | - | chr2_4:19490185-19490204 | Msa0319650:CDS | 45.0% | |
| GCCCTACTCTAGTGATACTT+GGG | - | chr2_4:19490254-19490273 | Msa0319650:intron | 45.0% | |
| AGTTGAAAGTGATGACTGCG+AGG | - | chr2_4:19490278-19490297 | Msa0319650:intron | 45.0% | |
| ATGGAAGAAGGAGGCTCTAT+AGG | - | chr2_4:19490357-19490376 | Msa0319650:CDS | 45.0% | |
| AAGGAGGCTCTATAGGATCT+TGG | - | chr2_4:19490364-19490383 | Msa0319650:CDS | 45.0% | |
| ! | GGATCTTGGTTATTTCGGGA+AGG | - | chr2_4:19490378-19490397 | Msa0319650:CDS | 45.0% |
| TATTTCGATCCACATCGGTG+AGG | - | chr2_4:19488698-19488717 | Msa0319650:CDS | 45.0% | |
| GAACTTTACTGCCTCCAACA+TGG | - | chr2_4:19488750-19488769 | Msa0319650:CDS | 45.0% | |
| TAGGTACCTGAATGCCATGT+TGG | + | chr2_4:19488767-19488786 | None:intergenic | 45.0% | |
| ACATGGCATTCAGGTACCTA+CGG | - | chr2_4:19488767-19488786 | Msa0319650:CDS | 45.0% | |
| ! | TTTAAGATTGGGTAGGCCGT+AGG | + | chr2_4:19488786-19488805 | None:intergenic | 45.0% |
| CTTACATCGTCAATGGCAGA+GGG | + | chr2_4:19488975-19488994 | None:intergenic | 45.0% | |
| CTGTGATGAATTGATCGGGT+TGG | + | chr2_4:19489022-19489041 | None:intergenic | 45.0% | |
| CAATTCATCACAGCCAACGA+AGG | - | chr2_4:19489029-19489048 | Msa0319650:CDS | 45.0% | |
| ATTATCCCACTAAGTGGGGT+CGG | + | chr2_4:19489137-19489156 | None:intergenic | 45.0% | |
| ! | GATAACTGTGCTGATCTGCA+AGG | - | chr2_4:19489248-19489267 | Msa0319650:CDS | 45.0% |
| TTATTGTTCAATGCCGTGGG+TGG | - | chr2_4:19489275-19489294 | Msa0319650:CDS | 45.0% | |
| GAGCATCTCTCTGCTGAATA+CGG | - | chr2_4:19489332-19489351 | Msa0319650:CDS | 45.0% | |
| AGGACAGAGGTTGAAACATG+GGG | + | chr2_4:19489395-19489414 | None:intergenic | 45.0% | |
| CTAGGACAGAGGTTGAAACA+TGG | + | chr2_4:19489397-19489416 | None:intergenic | 45.0% | |
| GTTGAAAGAACGGCGTTGTA+GGG | + | chr2_4:19489422-19489441 | None:intergenic | 45.0% | |
| !! | GAGAGCACTGGTTGAAAGAA+CGG | + | chr2_4:19489432-19489451 | None:intergenic | 45.0% |
| AGTGGGTCGCTGAATATCAA+GGG | + | chr2_4:19489519-19489538 | None:intergenic | 45.0% | |
| AAGTGGGTCGCTGAATATCA+AGG | + | chr2_4:19489520-19489539 | None:intergenic | 45.0% | |
| CAAACCTCAAAGAGGAAGTG+AGG | + | chr2_4:19489660-19489679 | None:intergenic | 45.0% | |
| TGCTGCATCAAACCTCAAAG+AGG | + | chr2_4:19489668-19489687 | None:intergenic | 45.0% | |
| TGATCTCAGCAGTAGAAAGC+TGG | + | chr2_4:19489801-19489820 | None:intergenic | 45.0% | |
| CACTTAGCCATCATGGAAGA+AGG | + | chr2_4:19489841-19489860 | None:intergenic | 45.0% | |
| GGAAAACACTTGAGCAACAC+TGG | + | chr2_4:19490094-19490113 | None:intergenic | 45.0% | |
| !! | GTGTTGCTCAAGTGTTTTCC+AGG | - | chr2_4:19490094-19490113 | Msa0319650:intron | 45.0% |
| GGAAGAAGGTGAGTTATCAC+AGG | - | chr2_4:19490185-19490204 | Msa0319650:CDS | 45.0% | |
| GCCCTACTCTAGTGATACTT+GGG | - | chr2_4:19490254-19490273 | Msa0319650:intron | 45.0% | |
| AGTTGAAAGTGATGACTGCG+AGG | - | chr2_4:19490278-19490297 | Msa0319650:intron | 45.0% | |
| ATGGAAGAAGGAGGCTCTAT+AGG | - | chr2_4:19490357-19490376 | Msa0319650:CDS | 45.0% | |
| AAGGAGGCTCTATAGGATCT+TGG | - | chr2_4:19490364-19490383 | Msa0319650:CDS | 45.0% | |
| ! | GGATCTTGGTTATTTCGGGA+AGG | - | chr2_4:19490378-19490397 | Msa0319650:CDS | 45.0% |
| GTACCTGAATGCCATGTTGG+AGG | + | chr2_4:19488764-19488783 | None:intergenic | 50.0% | |
| GAAGATTTCTCCTCCGTCGA+CGG | + | chr2_4:19488883-19488902 | None:intergenic | 50.0% | |
| AGATCAACATATACGGCGCG+TGG | + | chr2_4:19488948-19488967 | None:intergenic | 50.0% | |
| CCTTACATCGTCAATGGCAG+AGG | + | chr2_4:19488976-19488995 | None:intergenic | 50.0% | |
| CCTCTGCCATTGACGATGTA+AGG | - | chr2_4:19488973-19488992 | Msa0319650:CDS | 50.0% | |
| GCCATTGACGATGTAAGGAC+CGG | - | chr2_4:19488978-19488997 | Msa0319650:CDS | 50.0% | |
| ACCGGTCCTTACATCGTCAA+TGG | + | chr2_4:19488982-19489001 | None:intergenic | 50.0% | |
| !! | GATCGGGTTGGAAGAGTTCA+CGG | + | chr2_4:19489010-19489029 | None:intergenic | 50.0% |
| ACCACGTGCAAAACTGTTGG+CGG | + | chr2_4:19489057-19489076 | None:intergenic | 50.0% | |
| ACGACCACGTGCAAAACTGT+TGG | + | chr2_4:19489060-19489079 | None:intergenic | 50.0% | |
| ! | TGGTTTGGGTTCGCTTCTGT+TGG | - | chr2_4:19489310-19489329 | Msa0319650:CDS | 50.0% |
| GAGGTTGAAACATGGGGAGA+TGG | + | chr2_4:19489389-19489408 | None:intergenic | 50.0% | |
| !! | GTTGTAGGGTTCTAGGACAG+AGG | + | chr2_4:19489408-19489427 | None:intergenic | 50.0% |
| GGTTGAAAGAACGGCGTTGT+AGG | + | chr2_4:19489423-19489442 | None:intergenic | 50.0% | |
| ! | AGCATGTTCAAGGAGAGCAC+TGG | + | chr2_4:19489444-19489463 | None:intergenic | 50.0% |
| CGGCCATATCAGCATGTTCA+AGG | + | chr2_4:19489454-19489473 | None:intergenic | 50.0% | |
| AGGGTTGCACTTAGCCATCA+TGG | + | chr2_4:19489848-19489867 | None:intergenic | 50.0% | |
| GCTAAGTGCAACCCTCGATA+TGG | - | chr2_4:19489853-19489872 | Msa0319650:intron | 50.0% | |
| CATCCTCCAACTGTTGTTCC+TGG | - | chr2_4:19490018-19490037 | Msa0319650:intron | 50.0% | |
| TCACCACCAGGAACAACAGT+TGG | + | chr2_4:19490027-19490046 | None:intergenic | 50.0% | |
| TGATCTTGCCAAGGTGCAGA+GGG | - | chr2_4:19490044-19490063 | Msa0319650:intron | 50.0% | |
| ! | TGTGCACTGGTATGTGTGTG+AGG | - | chr2_4:19490158-19490177 | Msa0319650:CDS | 50.0% |
| ! | GTGCACTGGTATGTGTGTGA+GGG | - | chr2_4:19490159-19490178 | Msa0319650:CDS | 50.0% |
| CTGGTATGTGTGTGAGGGTA+TGG | - | chr2_4:19490164-19490183 | Msa0319650:CDS | 50.0% | |
| ! | GTGTGTGAGGGTATGGAAGA+AGG | - | chr2_4:19490171-19490190 | Msa0319650:CDS | 50.0% |
| TGAGTTATCACAGGCTCGTG+AGG | - | chr2_4:19490194-19490213 | Msa0319650:CDS | 50.0% | |
| CGCCCTACTCTAGTGATACT+TGG | - | chr2_4:19490253-19490272 | Msa0319650:intron | 50.0% | |
| GTACCTGAATGCCATGTTGG+AGG | + | chr2_4:19488764-19488783 | None:intergenic | 50.0% | |
| GAAGATTTCTCCTCCGTCGA+CGG | + | chr2_4:19488883-19488902 | None:intergenic | 50.0% | |
| AGATCAACATATACGGCGCG+TGG | + | chr2_4:19488948-19488967 | None:intergenic | 50.0% | |
| CCTTACATCGTCAATGGCAG+AGG | + | chr2_4:19488976-19488995 | None:intergenic | 50.0% | |
| CCTCTGCCATTGACGATGTA+AGG | - | chr2_4:19488973-19488992 | Msa0319650:CDS | 50.0% | |
| GCCATTGACGATGTAAGGAC+CGG | - | chr2_4:19488978-19488997 | Msa0319650:CDS | 50.0% | |
| ACCGGTCCTTACATCGTCAA+TGG | + | chr2_4:19488982-19489001 | None:intergenic | 50.0% | |
| !! | GATCGGGTTGGAAGAGTTCA+CGG | + | chr2_4:19489010-19489029 | None:intergenic | 50.0% |
| ACCACGTGCAAAACTGTTGG+CGG | + | chr2_4:19489057-19489076 | None:intergenic | 50.0% | |
| ACGACCACGTGCAAAACTGT+TGG | + | chr2_4:19489060-19489079 | None:intergenic | 50.0% | |
| ! | TGGTTTGGGTTCGCTTCTGT+TGG | - | chr2_4:19489310-19489329 | Msa0319650:CDS | 50.0% |
| GAGGTTGAAACATGGGGAGA+TGG | + | chr2_4:19489389-19489408 | None:intergenic | 50.0% | |
| !! | GTTGTAGGGTTCTAGGACAG+AGG | + | chr2_4:19489408-19489427 | None:intergenic | 50.0% |
| GGTTGAAAGAACGGCGTTGT+AGG | + | chr2_4:19489423-19489442 | None:intergenic | 50.0% | |
| ! | AGCATGTTCAAGGAGAGCAC+TGG | + | chr2_4:19489444-19489463 | None:intergenic | 50.0% |
| CGGCCATATCAGCATGTTCA+AGG | + | chr2_4:19489454-19489473 | None:intergenic | 50.0% | |
| AGGGTTGCACTTAGCCATCA+TGG | + | chr2_4:19489848-19489867 | None:intergenic | 50.0% | |
| GCTAAGTGCAACCCTCGATA+TGG | - | chr2_4:19489853-19489872 | Msa0319650:intron | 50.0% | |
| CATCCTCCAACTGTTGTTCC+TGG | - | chr2_4:19490018-19490037 | Msa0319650:intron | 50.0% | |
| TCACCACCAGGAACAACAGT+TGG | + | chr2_4:19490027-19490046 | None:intergenic | 50.0% | |
| TGATCTTGCCAAGGTGCAGA+GGG | - | chr2_4:19490044-19490063 | Msa0319650:intron | 50.0% | |
| ! | TGTGCACTGGTATGTGTGTG+AGG | - | chr2_4:19490158-19490177 | Msa0319650:CDS | 50.0% |
| ! | GTGCACTGGTATGTGTGTGA+GGG | - | chr2_4:19490159-19490178 | Msa0319650:CDS | 50.0% |
| CTGGTATGTGTGTGAGGGTA+TGG | - | chr2_4:19490164-19490183 | Msa0319650:CDS | 50.0% | |
| ! | GTGTGTGAGGGTATGGAAGA+AGG | - | chr2_4:19490171-19490190 | Msa0319650:CDS | 50.0% |
| TGAGTTATCACAGGCTCGTG+AGG | - | chr2_4:19490194-19490213 | Msa0319650:CDS | 50.0% | |
| CGCCCTACTCTAGTGATACT+TGG | - | chr2_4:19490253-19490272 | Msa0319650:intron | 50.0% | |
| GGCATTTCCGACCTGGATAC+CGG | + | chr2_4:19488724-19488743 | None:intergenic | 55.0% | |
| GAGGCAGTAAAGTTCCCAGC+AGG | + | chr2_4:19488745-19488764 | None:intergenic | 55.0% | |
| CTGCCTCCAACATGGCATTC+AGG | - | chr2_4:19488758-19488777 | Msa0319650:CDS | 55.0% | |
| TCGACGGTACTCTTCCCATC+AGG | + | chr2_4:19488867-19488886 | None:intergenic | 55.0% | |
| !! | GATGGGAAGAGTACCGTCGA+CGG | - | chr2_4:19488867-19488886 | Msa0319650:CDS | 55.0% |
| GAAGAGTTCACGGTAGGCAC+CGG | + | chr2_4:19489000-19489019 | None:intergenic | 55.0% | |
| GGGTTGGAAGAGTTCACGGT+AGG | + | chr2_4:19489006-19489025 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+CGG | + | chr2_4:19489129-19489148 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr2_4:19489129-19489148 | Msa0319650:CDS | 55.0% | |
| TTGTTCAATGCCGTGGGTGG+CGG | - | chr2_4:19489278-19489297 | Msa0319650:CDS | 55.0% | |
| GAACGGCGTTGTAGGGTTCT+AGG | + | chr2_4:19489415-19489434 | None:intergenic | 55.0% | |
| CGTCCCTCACTTCCTCTTTG+AGG | - | chr2_4:19489653-19489672 | Msa0319650:CDS | 55.0% | |
| CAGCAGTAGAAAGCTGGTCG+TGG | + | chr2_4:19489795-19489814 | None:intergenic | 55.0% | |
| CCACCAGGAACAACAGTTGG+AGG | + | chr2_4:19490024-19490043 | None:intergenic | 55.0% | |
| CCTCCAACTGTTGTTCCTGG+TGG | - | chr2_4:19490021-19490040 | Msa0319650:intron | 55.0% | |
| ! | TCCTGGTGGTGATCTTGCCA+AGG | - | chr2_4:19490035-19490054 | Msa0319650:intron | 55.0% |
| ACCTTGGCAAGATCACCACC+AGG | + | chr2_4:19490039-19490058 | None:intergenic | 55.0% | |
| GTGATCTTGCCAAGGTGCAG+AGG | - | chr2_4:19490043-19490062 | Msa0319650:intron | 55.0% | |
| ! | CCAGTGCACAAAAGCACGCT+TGG | + | chr2_4:19490148-19490167 | None:intergenic | 55.0% |
| ! | CCAAGCGTGCTTTTGTGCAC+TGG | - | chr2_4:19490145-19490164 | Msa0319650:CDS | 55.0% |
| TGAGGATCTTGCTGCTCTCG+AGG | - | chr2_4:19490212-19490231 | Msa0319650:intron | 55.0% | |
| ! | TGCTCTCGAGGAGGAGTATG+AGG | - | chr2_4:19490224-19490243 | Msa0319650:intron | 55.0% |
| ! | TGTGCACTGGTATGTGACCG+AGG | - | chr2_4:19490332-19490351 | Msa0319650:CDS | 55.0% |
| ! | GTGCACTGGTATGTGACCGA+GGG | - | chr2_4:19490333-19490352 | Msa0319650:CDS | 55.0% |
| CTGGTATGTGACCGAGGGTA+TGG | - | chr2_4:19490338-19490357 | Msa0319650:CDS | 55.0% | |
| ! | GTGACCGAGGGTATGGAAGA+AGG | - | chr2_4:19490345-19490364 | Msa0319650:CDS | 55.0% |
| ! | ACCGAGGGTATGGAAGAAGG+AGG | - | chr2_4:19490348-19490367 | Msa0319650:CDS | 55.0% |
| GCCTCCTTCTTCCATACCCT+CGG | + | chr2_4:19490352-19490371 | None:intergenic | 55.0% | |
| GGCATTTCCGACCTGGATAC+CGG | + | chr2_4:19488724-19488743 | None:intergenic | 55.0% | |
| GAGGCAGTAAAGTTCCCAGC+AGG | + | chr2_4:19488745-19488764 | None:intergenic | 55.0% | |
| CTGCCTCCAACATGGCATTC+AGG | - | chr2_4:19488758-19488777 | Msa0319650:CDS | 55.0% | |
| TCGACGGTACTCTTCCCATC+AGG | + | chr2_4:19488867-19488886 | None:intergenic | 55.0% | |
| !! | GATGGGAAGAGTACCGTCGA+CGG | - | chr2_4:19488867-19488886 | Msa0319650:CDS | 55.0% |
| GAAGAGTTCACGGTAGGCAC+CGG | + | chr2_4:19489000-19489019 | None:intergenic | 55.0% | |
| GGGTTGGAAGAGTTCACGGT+AGG | + | chr2_4:19489006-19489025 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+CGG | + | chr2_4:19489129-19489148 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr2_4:19489129-19489148 | Msa0319650:CDS | 55.0% | |
| TTGTTCAATGCCGTGGGTGG+CGG | - | chr2_4:19489278-19489297 | Msa0319650:CDS | 55.0% | |
| GAACGGCGTTGTAGGGTTCT+AGG | + | chr2_4:19489415-19489434 | None:intergenic | 55.0% | |
| CGTCCCTCACTTCCTCTTTG+AGG | - | chr2_4:19489653-19489672 | Msa0319650:CDS | 55.0% | |
| CAGCAGTAGAAAGCTGGTCG+TGG | + | chr2_4:19489795-19489814 | None:intergenic | 55.0% | |
| CCACCAGGAACAACAGTTGG+AGG | + | chr2_4:19490024-19490043 | None:intergenic | 55.0% | |
| CCTCCAACTGTTGTTCCTGG+TGG | - | chr2_4:19490021-19490040 | Msa0319650:intron | 55.0% | |
| ! | TCCTGGTGGTGATCTTGCCA+AGG | - | chr2_4:19490035-19490054 | Msa0319650:intron | 55.0% |
| ACCTTGGCAAGATCACCACC+AGG | + | chr2_4:19490039-19490058 | None:intergenic | 55.0% | |
| GTGATCTTGCCAAGGTGCAG+AGG | - | chr2_4:19490043-19490062 | Msa0319650:intron | 55.0% | |
| ! | CCAGTGCACAAAAGCACGCT+TGG | + | chr2_4:19490148-19490167 | None:intergenic | 55.0% |
| ! | CCAAGCGTGCTTTTGTGCAC+TGG | - | chr2_4:19490145-19490164 | Msa0319650:CDS | 55.0% |
| TGAGGATCTTGCTGCTCTCG+AGG | - | chr2_4:19490212-19490231 | Msa0319650:intron | 55.0% | |
| ! | TGCTCTCGAGGAGGAGTATG+AGG | - | chr2_4:19490224-19490243 | Msa0319650:intron | 55.0% |
| ! | TGTGCACTGGTATGTGACCG+AGG | - | chr2_4:19490332-19490351 | Msa0319650:CDS | 55.0% |
| ! | GTGCACTGGTATGTGACCGA+GGG | - | chr2_4:19490333-19490352 | Msa0319650:CDS | 55.0% |
| CTGGTATGTGACCGAGGGTA+TGG | - | chr2_4:19490338-19490357 | Msa0319650:CDS | 55.0% | |
| ! | GTGACCGAGGGTATGGAAGA+AGG | - | chr2_4:19490345-19490364 | Msa0319650:CDS | 55.0% |
| ! | ACCGAGGGTATGGAAGAAGG+AGG | - | chr2_4:19490348-19490367 | Msa0319650:CDS | 55.0% |
| GCCTCCTTCTTCCATACCCT+CGG | + | chr2_4:19490352-19490371 | None:intergenic | 55.0% | |
| TCGATCCACATCGGTGAGGC+CGG | - | chr2_4:19488702-19488721 | Msa0319650:CDS | 60.0% | |
| TCCAGGTCGGAAATGCCTGC+TGG | - | chr2_4:19488727-19488746 | Msa0319650:CDS | 60.0% | |
| CCAGGTCGGAAATGCCTGCT+GGG | - | chr2_4:19488728-19488747 | Msa0319650:CDS | 60.0% | |
| ! | GCCGCCAACAGTTTTGCACG+TGG | - | chr2_4:19489053-19489072 | Msa0319650:CDS | 60.0% |
| GTGTAGCCGACCCCACTTAG+TGG | - | chr2_4:19489128-19489147 | Msa0319650:CDS | 60.0% | |
| TCCTACAGCCCTCTGCACCT+TGG | + | chr2_4:19490055-19490074 | None:intergenic | 60.0% | |
| GGATCTTGCTGCTCTCGAGG+AGG | - | chr2_4:19490215-19490234 | Msa0319650:intron | 60.0% | |
| TCGATCCACATCGGTGAGGC+CGG | - | chr2_4:19488702-19488721 | Msa0319650:CDS | 60.0% | |
| TCCAGGTCGGAAATGCCTGC+TGG | - | chr2_4:19488727-19488746 | Msa0319650:CDS | 60.0% | |
| CCAGGTCGGAAATGCCTGCT+GGG | - | chr2_4:19488728-19488747 | Msa0319650:CDS | 60.0% | |
| ! | GCCGCCAACAGTTTTGCACG+TGG | - | chr2_4:19489053-19489072 | Msa0319650:CDS | 60.0% |
| GTGTAGCCGACCCCACTTAG+TGG | - | chr2_4:19489128-19489147 | Msa0319650:CDS | 60.0% | |
| TCCTACAGCCCTCTGCACCT+TGG | + | chr2_4:19490055-19490074 | None:intergenic | 60.0% | |
| GGATCTTGCTGCTCTCGAGG+AGG | - | chr2_4:19490215-19490234 | Msa0319650:intron | 60.0% | |
| GGATACCGGCCTCACCGATG+TGG | + | chr2_4:19488710-19488729 | None:intergenic | 65.0% | |
| CATCGGTGAGGCCGGTATCC+AGG | - | chr2_4:19488710-19488729 | Msa0319650:CDS | 65.0% | |
| GGTGAGGCCGGTATCCAGGT+CGG | - | chr2_4:19488714-19488733 | Msa0319650:CDS | 65.0% | |
| CCCAGCAGGCATTTCCGACC+TGG | + | chr2_4:19488731-19488750 | None:intergenic | 65.0% | |
| !! | GGGAAGAGTACCGTCGACGG+AGG | - | chr2_4:19488870-19488889 | Msa0319650:CDS | 65.0% |
| ACTGTTGGCGGCGCCTTCGT+TGG | + | chr2_4:19489045-19489064 | None:intergenic | 65.0% | |
| ! | TGGCGGCACAGGCTCTGGTT+TGG | - | chr2_4:19489295-19489314 | Msa0319650:CDS | 65.0% |
| ! | GGCGGCACAGGCTCTGGTTT+GGG | - | chr2_4:19489296-19489315 | Msa0319650:CDS | 65.0% |
| GCCAAGGTGCAGAGGGCTGT+AGG | - | chr2_4:19490051-19490070 | Msa0319650:intron | 65.0% | |
| GGATACCGGCCTCACCGATG+TGG | + | chr2_4:19488710-19488729 | None:intergenic | 65.0% | |
| CATCGGTGAGGCCGGTATCC+AGG | - | chr2_4:19488710-19488729 | Msa0319650:CDS | 65.0% | |
| GGTGAGGCCGGTATCCAGGT+CGG | - | chr2_4:19488714-19488733 | Msa0319650:CDS | 65.0% | |
| CCCAGCAGGCATTTCCGACC+TGG | + | chr2_4:19488731-19488750 | None:intergenic | 65.0% | |
| !! | GGGAAGAGTACCGTCGACGG+AGG | - | chr2_4:19488870-19488889 | Msa0319650:CDS | 65.0% |
| ACTGTTGGCGGCGCCTTCGT+TGG | + | chr2_4:19489045-19489064 | None:intergenic | 65.0% | |
| ! | TGGCGGCACAGGCTCTGGTT+TGG | - | chr2_4:19489295-19489314 | Msa0319650:CDS | 65.0% |
| ! | GGCGGCACAGGCTCTGGTTT+GGG | - | chr2_4:19489296-19489315 | Msa0319650:CDS | 65.0% |
| GCCAAGGTGCAGAGGGCTGT+AGG | - | chr2_4:19490051-19490070 | Msa0319650:intron | 65.0% | |
| ! | AATGCCGTGGGTGGCGGCAC+AGG | - | chr2_4:19489284-19489303 | Msa0319650:CDS | 70.0% |
| AGAGCCTGTGCCGCCACCCA+CGG | + | chr2_4:19489291-19489310 | None:intergenic | 70.0% | |
| ! | AATGCCGTGGGTGGCGGCAC+AGG | - | chr2_4:19489284-19489303 | Msa0319650:CDS | 70.0% |
| AGAGCCTGTGCCGCCACCCA+CGG | + | chr2_4:19489291-19489310 | None:intergenic | 70.0% | |
| ! | GTGGGTGGCGGCACAGGCTC+TGG | - | chr2_4:19489290-19489309 | Msa0319650:CDS | 75.0% |
| ! | GTGGGTGGCGGCACAGGCTC+TGG | - | chr2_4:19489290-19489309 | Msa0319650:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 19488687 | 19490407 | 19488687 | ID=Msa0319650;Name=Msa0319650 |
| chr2_4 | mRNA | 19488687 | 19490407 | 19488687 | ID=Msa0319650-mRNA-1;Parent=Msa0319650;Name=Msa0319650-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.33|0|1|1|1|4|0|435 |
| chr2_4 | exon | 19490315 | 19490407 | 19490315 | ID=Msa0319650-mRNA-1:exon:7192;Parent=Msa0319650-mRNA-1 |
| chr2_4 | exon | 19490105 | 19490230 | 19490105 | ID=Msa0319650-mRNA-1:exon:7191;Parent=Msa0319650-mRNA-1 |
| chr2_4 | exon | 19489526 | 19489852 | 19489526 | ID=Msa0319650-mRNA-1:exon:7190;Parent=Msa0319650-mRNA-1 |
| chr2_4 | exon | 19488687 | 19489448 | 19488687 | ID=Msa0319650-mRNA-1:exon:7189;Parent=Msa0319650-mRNA-1 |
| chr2_4 | CDS | 19490315 | 19490407 | 19490315 | ID=Msa0319650-mRNA-1:cds;Parent=Msa0319650-mRNA-1 |
| chr2_4 | CDS | 19490105 | 19490230 | 19490105 | ID=Msa0319650-mRNA-1:cds;Parent=Msa0319650-mRNA-1 |
| chr2_4 | CDS | 19489526 | 19489852 | 19489526 | ID=Msa0319650-mRNA-1:cds;Parent=Msa0319650-mRNA-1 |
| chr2_4 | CDS | 19488687 | 19489448 | 19488687 | ID=Msa0319650-mRNA-1:cds;Parent=Msa0319650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
