Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0319760 | XP_003594746.1 | 98.151 | 595 | 0 | 1 | 1 | 584 | 1 | 595 | 0.0 | 1199 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0319760 | sp|Q0WSF1|AL221_ARATH | 78.741 | 588 | 114 | 1 | 1 | 577 | 1 | 588 | 0.0 | 996 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0199760 | Msa0319760 | 0.860834 | 1.566851e-63 | -8.615850e-47 |
Msa0242310 | Msa0319760 | 0.925324 | 2.140051e-90 | -8.615850e-47 |
Msa0280520 | Msa0319760 | 0.826230 | 3.040150e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0319760 | MtrunA17_Chr2g0294411 | 98.151 | 595 | 0 | 1 | 1 | 584 | 1 | 595 | 0.0 | 1199 |
Msa0319760 | MtrunA17_Chr3g0117861 | 30.867 | 473 | 296 | 11 | 62 | 517 | 75 | 533 | 5.48e-60 | 208 |
Msa0319760 | MtrunA17_Chr2g0310091 | 30.085 | 472 | 294 | 10 | 63 | 516 | 76 | 529 | 4.45e-59 | 206 |
Msa0319760 | MtrunA17_Chr4g0059521 | 31.013 | 474 | 299 | 8 | 64 | 518 | 23 | 487 | 5.46e-58 | 202 |
Msa0319760 | MtrunA17_Chr6g0485301 | 34.417 | 369 | 220 | 8 | 153 | 517 | 143 | 493 | 7.35e-58 | 201 |
Msa0319760 | MtrunA17_Chr8g0390651 | 28.753 | 473 | 306 | 10 | 62 | 517 | 36 | 494 | 1.12e-56 | 198 |
Msa0319760 | MtrunA17_Chr3g0118121 | 30.169 | 474 | 301 | 10 | 64 | 517 | 23 | 486 | 1.96e-56 | 197 |
Msa0319760 | MtrunA17_Chr8g0365221 | 29.492 | 512 | 311 | 13 | 26 | 517 | 51 | 532 | 9.81e-56 | 197 |
Msa0319760 | MtrunA17_Chr3g0118081 | 29.363 | 487 | 311 | 10 | 64 | 527 | 53 | 529 | 1.50e-55 | 196 |
Msa0319760 | MtrunA17_Chr8g0390631 | 29.645 | 479 | 294 | 15 | 62 | 517 | 27 | 485 | 1.17e-54 | 192 |
Msa0319760 | MtrunA17_Chr4g0059221 | 29.228 | 479 | 296 | 11 | 62 | 517 | 77 | 535 | 4.66e-54 | 192 |
Msa0319760 | MtrunA17_Chr6g0485311 | 28.330 | 473 | 306 | 11 | 62 | 516 | 33 | 490 | 4.48e-49 | 177 |
Msa0319760 | MtrunA17_Chr8g0372381 | 27.564 | 468 | 298 | 9 | 87 | 529 | 8 | 459 | 4.39e-44 | 164 |
Msa0319760 | MtrunA17_Chr4g0074171 | 28.482 | 481 | 295 | 14 | 62 | 517 | 29 | 485 | 7.36e-42 | 157 |
Msa0319760 | MtrunA17_Chr1g0149961 | 27.984 | 486 | 311 | 13 | 52 | 517 | 19 | 485 | 1.50e-41 | 157 |
Msa0319760 | MtrunA17_Chr2g0328781 | 27.477 | 444 | 294 | 10 | 96 | 524 | 35 | 465 | 1.72e-41 | 157 |
Msa0319760 | MtrunA17_Chr8g0384741 | 27.130 | 446 | 298 | 11 | 124 | 565 | 116 | 538 | 8.19e-39 | 150 |
Msa0319760 | MtrunA17_Chr3g0124811 | 25.607 | 453 | 297 | 12 | 91 | 528 | 40 | 467 | 1.31e-37 | 145 |
Msa0319760 | MtrunA17_Chr1g0159811 | 24.105 | 419 | 290 | 9 | 86 | 493 | 21 | 422 | 8.52e-35 | 137 |
Msa0319760 | MtrunA17_Chr2g0300801 | 23.830 | 470 | 323 | 9 | 56 | 505 | 27 | 481 | 8.08e-28 | 117 |
Msa0319760 | MtrunA17_Chr4g0032441 | 29.257 | 417 | 262 | 13 | 102 | 503 | 26 | 424 | 3.10e-27 | 115 |
Msa0319760 | MtrunA17_Chr4g0049641 | 24.884 | 430 | 301 | 8 | 61 | 477 | 54 | 474 | 8.65e-23 | 102 |
Msa0319760 | MtrunA17_Chr2g0279751 | 24.476 | 429 | 294 | 11 | 66 | 477 | 32 | 447 | 2.27e-21 | 97.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0319760 | AT3G66658.2 | 78.741 | 588 | 114 | 1 | 1 | 577 | 1 | 588 | 0.0 | 996 |
Msa0319760 | AT3G66658.1 | 79.266 | 545 | 102 | 1 | 1 | 534 | 1 | 545 | 0.0 | 927 |
Msa0319760 | AT1G74920.1 | 32.000 | 475 | 291 | 11 | 64 | 517 | 23 | 486 | 8.36e-61 | 210 |
Msa0319760 | AT3G48170.1 | 30.408 | 490 | 300 | 15 | 64 | 526 | 23 | 498 | 8.96e-59 | 204 |
Msa0319760 | AT1G23800.1 | 35.652 | 345 | 208 | 6 | 177 | 517 | 191 | 525 | 3.35e-57 | 201 |
Msa0319760 | AT1G74920.2 | 32.648 | 438 | 268 | 10 | 96 | 517 | 55 | 481 | 1.30e-56 | 198 |
Msa0319760 | AT3G48000.1 | 29.598 | 473 | 302 | 10 | 62 | 517 | 71 | 529 | 5.27e-55 | 195 |
Msa0319760 | AT3G24503.1 | 31.034 | 406 | 261 | 8 | 117 | 517 | 101 | 492 | 4.74e-53 | 189 |
Msa0319760 | AT1G79440.1 | 28.298 | 470 | 303 | 9 | 64 | 516 | 68 | 520 | 2.13e-50 | 182 |
Msa0319760 | AT2G24270.3 | 29.106 | 481 | 292 | 14 | 62 | 517 | 29 | 485 | 3.51e-43 | 162 |
Msa0319760 | AT2G24270.1 | 29.106 | 481 | 292 | 14 | 62 | 517 | 29 | 485 | 3.51e-43 | 162 |
Msa0319760 | AT2G24270.4 | 29.106 | 481 | 292 | 14 | 62 | 517 | 29 | 485 | 4.85e-43 | 161 |
Msa0319760 | AT2G24270.2 | 29.106 | 481 | 292 | 14 | 62 | 517 | 69 | 525 | 1.15e-42 | 161 |
Msa0319760 | AT1G44170.1 | 26.164 | 451 | 300 | 10 | 124 | 567 | 59 | 483 | 3.56e-42 | 159 |
Msa0319760 | AT1G44170.2 | 26.164 | 451 | 300 | 10 | 124 | 567 | 59 | 483 | 3.56e-42 | 159 |
Msa0319760 | AT1G44170.3 | 26.218 | 431 | 285 | 10 | 144 | 567 | 16 | 420 | 4.33e-40 | 151 |
Msa0319760 | AT4G36250.1 | 28.354 | 395 | 248 | 11 | 123 | 503 | 54 | 427 | 1.98e-39 | 151 |
Msa0319760 | AT4G34240.1 | 25.000 | 432 | 298 | 9 | 82 | 503 | 76 | 491 | 1.68e-33 | 135 |
Msa0319760 | AT4G34240.4 | 25.000 | 432 | 298 | 9 | 82 | 503 | 61 | 476 | 1.77e-33 | 134 |
Msa0319760 | AT4G34240.3 | 26.243 | 362 | 245 | 8 | 148 | 503 | 4 | 349 | 2.76e-31 | 126 |
Msa0319760 | AT1G23800.2 | 37.566 | 189 | 110 | 3 | 177 | 361 | 191 | 375 | 1.47e-30 | 124 |
Msa0319760 | AT1G54100.2 | 23.504 | 468 | 321 | 11 | 57 | 503 | 27 | 478 | 6.35e-28 | 118 |
Msa0319760 | AT1G54100.1 | 23.504 | 468 | 321 | 11 | 57 | 503 | 27 | 478 | 6.35e-28 | 118 |
Msa0319760 | AT2G14170.2 | 24.091 | 440 | 292 | 11 | 61 | 477 | 17 | 437 | 8.62e-23 | 102 |
Msa0319760 | AT2G14170.1 | 24.091 | 440 | 292 | 11 | 61 | 477 | 126 | 546 | 2.21e-22 | 102 |
Msa0319760 | AT2G14170.3 | 24.091 | 440 | 292 | 11 | 61 | 477 | 126 | 546 | 2.29e-22 | 101 |
Msa0319760 | AT4G34240.2 | 26.449 | 276 | 180 | 6 | 82 | 347 | 76 | 338 | 1.23e-16 | 82.8 |
Find 188 sgRNAs with CRISPR-Local
Find 540 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAATTTGATTCTATGGATA+TGG | 0.178821 | 2_4:+19678583 | None:intergenic |
CTTGCTAATGACTCAAAATA+TGG | 0.189862 | 2_4:-19671805 | Msa0319760:CDS |
GAAAAGAAAACTGGTTTGTT+AGG | 0.223232 | 2_4:+19678379 | None:intergenic |
GCCAGCCACCATGAAGTATT+TGG | 0.227166 | 2_4:-19676927 | Msa0319760:CDS |
TAAAGTTATCTTGCTATATA+AGG | 0.230688 | 2_4:+19670722 | None:intergenic |
TGGAAATGGAATTGTGATTA+AGG | 0.231209 | 2_4:-19674130 | Msa0319760:intron |
TTGCAGGGCCCACCACTTGC+TGG | 0.231865 | 2_4:-19672233 | Msa0319760:intron |
AGGAACAAAATTTGATTCTA+TGG | 0.232432 | 2_4:+19678577 | None:intergenic |
ATGTCTTGGTGAGAGTTATT+TGG | 0.257207 | 2_4:+19670579 | None:intergenic |
TTCAAATAATACGGGGCTTC+TGG | 0.272448 | 2_4:-19670855 | Msa0319760:three_prime_UTR |
TTCTTCCTTCAATGGCGTTT+TGG | 0.273527 | 2_4:-19678359 | Msa0319760:exon |
ATTGATATAGTTTGATACTA+TGG | 0.290880 | 2_4:+19678484 | None:intergenic |
GTCAGGGCTGTTCTTCAGTC+AGG | 0.294176 | 2_4:-19673020 | Msa0319760:CDS |
TAGTATCCTGTGGCAGAAAA+TGG | 0.307985 | 2_4:-19671057 | Msa0319760:CDS |
CAACATGTGAGAAGATAAAT+TGG | 0.311009 | 2_4:-19674691 | Msa0319760:CDS |
AGAAAATGGATTTGAATTTC+AGG | 0.311412 | 2_4:-19671043 | Msa0319760:CDS |
GGCGTAAAACACAGTGGATT+TGG | 0.317784 | 2_4:-19671267 | Msa0319760:CDS |
GAACATTCTGAAAAGCTTCT+AGG | 0.321342 | 2_4:-19672179 | Msa0319760:CDS |
CCACCAAGCTCTAGTGTAAC+TGG | 0.324494 | 2_4:+19673176 | None:intergenic |
CTCTACAGGTGGCAATAAAA+AGG | 0.324927 | 2_4:-19670932 | Msa0319760:CDS |
CTTACCAGGTTTGGTGAAAC+AGG | 0.328288 | 2_4:-19673691 | Msa0319760:intron |
CGCTATATGGTCTTAGCATA+TGG | 0.333976 | 2_4:-19671005 | Msa0319760:CDS |
ACTTGCTGGGAAGTATGATA+TGG | 0.337654 | 2_4:-19672219 | Msa0319760:CDS |
TCAGAGCTAAACTTCATTAT+CGG | 0.341800 | 2_4:+19671844 | None:intergenic |
AAAACTGGTTTGTTAGGGTT+TGG | 0.346345 | 2_4:+19678385 | None:intergenic |
GACCTTGTTGAGGTGATAAC+AGG | 0.357161 | 2_4:-19673795 | Msa0319760:CDS |
AACCACAAACACTCAACTAA+TGG | 0.358016 | 2_4:+19670553 | None:intergenic |
TCACTTGTTGAAGCGCTATA+TGG | 0.360016 | 2_4:-19671018 | Msa0319760:CDS |
GCATTTGACTTATAGGCATT+TGG | 0.361428 | 2_4:-19671877 | Msa0319760:intron |
TGCTTATTGGATGATGATAC+TGG | 0.366269 | 2_4:-19670776 | Msa0319760:three_prime_UTR |
ATTGTTGCACGTGGAAGTTT+TGG | 0.369745 | 2_4:-19672122 | Msa0319760:CDS |
TTTGGGATTTCTTCCTGCTT+TGG | 0.373547 | 2_4:-19676909 | Msa0319760:CDS |
TCCTGCTTTGGCGCCGGATG+AGG | 0.376504 | 2_4:-19676897 | Msa0319760:intron |
GGTATCTTTGTCTTAATGAA+TGG | 0.385200 | 2_4:+19671174 | None:intergenic |
CCAGCCACCATGAAGTATTT+GGG | 0.385798 | 2_4:-19676926 | Msa0319760:CDS |
AGGATATCTTCACGTGATAC+TGG | 0.386025 | 2_4:-19674752 | Msa0319760:CDS |
GTCCATTAGTTGAGTGTTTG+TGG | 0.388835 | 2_4:-19670555 | Msa0319760:three_prime_UTR |
AAGGGGAACGGCGCAGCAAT+CGG | 0.391886 | 2_4:-19676972 | Msa0319760:CDS |
TGCAGGGCCCACCACTTGCT+GGG | 0.393682 | 2_4:-19672232 | Msa0319760:intron |
CTATGGCAGCAAGGGCTGAT+TGG | 0.398099 | 2_4:+19673829 | None:intergenic |
TTGAAGGAAGAAAAGAAAAC+TGG | 0.400057 | 2_4:+19678370 | None:intergenic |
ATAGTCACATTCAAATAATA+CGG | 0.401673 | 2_4:-19670864 | Msa0319760:three_prime_UTR |
GTAACTTTGCTGACAAAAGA+TGG | 0.410535 | 2_4:+19672945 | None:intergenic |
TCAGAACATGCAAGTTGGTC+TGG | 0.413232 | 2_4:-19673873 | Msa0319760:CDS |
AACGTCGATCGAAGGAACTT+TGG | 0.413262 | 2_4:+19678272 | None:intergenic |
CTAGAGAGTTCTATTTCTGT+TGG | 0.415010 | 2_4:+19678417 | None:intergenic |
AGACAGACCTGAATAGGCTT+TGG | 0.415353 | 2_4:+19671153 | None:intergenic |
AAAGATACCAAAGCCTATTC+AGG | 0.419183 | 2_4:-19671160 | Msa0319760:intron |
ACGTCGATCGAAGGAACTTT+GGG | 0.420608 | 2_4:+19678273 | None:intergenic |
TGTCAAGGTTTCGCTGCATT+CGG | 0.423622 | 2_4:-19670453 | Msa0319760:three_prime_UTR |
AAAAGAAAACTGGTTTGTTA+GGG | 0.425422 | 2_4:+19678380 | None:intergenic |
ATTTCTTCCTGCTTTGGCGC+CGG | 0.425705 | 2_4:-19676903 | Msa0319760:CDS |
AAGAAATCCCAAATACTTCA+TGG | 0.426395 | 2_4:+19676919 | None:intergenic |
GAGAAATGACTAATCATGTT+AGG | 0.429516 | 2_4:-19670910 | Msa0319760:exon |
GTTTGTTAGGGTTTGGAAGA+AGG | 0.430208 | 2_4:+19678392 | None:intergenic |
GGACGATTCGGTGGTGTTGA+AGG | 0.434305 | 2_4:-19671246 | Msa0319760:CDS |
AGTCAGTAGTTGAAGATAGA+TGG | 0.436417 | 2_4:-19671200 | Msa0319760:CDS |
CTTGCATCAATTTCATTGAG+TGG | 0.441509 | 2_4:+19672039 | None:intergenic |
TGCATCGAATTACATGTGTC+AGG | 0.444184 | 2_4:-19671692 | Msa0319760:intron |
CACAGTGGATTTGGACGATT+CGG | 0.447805 | 2_4:-19671258 | Msa0319760:CDS |
AAATTTGATTCTATGGATAT+GGG | 0.449413 | 2_4:+19678584 | None:intergenic |
AACTTCATTATCGGCATGAT+AGG | 0.455245 | 2_4:+19671853 | None:intergenic |
CTTCAACTACTGACTTTACA+AGG | 0.459181 | 2_4:+19671208 | None:intergenic |
TATAAGATGAAATGAAAGTA+AGG | 0.459253 | 2_4:+19678557 | None:intergenic |
CCCAAATACTTCATGGTGGC+TGG | 0.459911 | 2_4:+19676926 | None:intergenic |
AGGTTGCTCAAATTGCTGTC+AGG | 0.459934 | 2_4:-19673037 | Msa0319760:CDS |
ATCACCTCAACAAGGTCCTC+TGG | 0.461400 | 2_4:+19673801 | None:intergenic |
AAGGTCCTCTGGAGCTCCTA+TGG | 0.461753 | 2_4:+19673812 | None:intergenic |
GGACGGTCCAATTTCAAGCT+TGG | 0.461949 | 2_4:+19670352 | None:intergenic |
ATTGACGGGTCGCTTATCAT+AGG | 0.465788 | 2_4:-19670621 | Msa0319760:three_prime_UTR |
TTGCTAATGACTCAAAATAT+GGG | 0.466403 | 2_4:-19671804 | Msa0319760:CDS |
GAGAGTTCTATTTCTGTTGG+AGG | 0.466543 | 2_4:+19678420 | None:intergenic |
GATAAGCGACCCGTCAATCA+TGG | 0.468281 | 2_4:+19670626 | None:intergenic |
AGGGGAACGGCGCAGCAATC+GGG | 0.468490 | 2_4:-19676971 | Msa0319760:CDS |
ATGGGATCGTTTGCAAGCAT+TGG | 0.469554 | 2_4:-19670986 | Msa0319760:CDS |
CAAGGGCTGATTGGATGATC+CGG | 0.470846 | 2_4:+19673838 | None:intergenic |
ATCACCTGGGGTTGGTAAGA+TGG | 0.471554 | 2_4:-19673626 | Msa0319760:intron |
GATTGCTGCGCCGTTCCCCT+TGG | 0.471929 | 2_4:+19676974 | None:intergenic |
TGCTGCGCCGTTCCCCTTGG+AGG | 0.473549 | 2_4:+19676977 | None:intergenic |
AGCGAATGCAAGAACGAGAA+TGG | 0.478429 | 2_4:+19678332 | None:intergenic |
GATAAATTGGCTATTGTCAG+AGG | 0.478430 | 2_4:-19674678 | Msa0319760:CDS |
TTAATTGCAGTGTTGGAAGT+TGG | 0.483090 | 2_4:-19678156 | Msa0319760:intron |
ACCTCATCCGGCGCCAAAGC+AGG | 0.483725 | 2_4:+19676896 | None:intergenic |
CGATCTAGATCCAACGACCT+TGG | 0.485859 | 2_4:-19670330 | Msa0319760:three_prime_UTR |
TCAGGGCTGTTCTTCAGTCA+GGG | 0.485988 | 2_4:-19673019 | Msa0319760:CDS |
AAGATGGATAAATGTTCCTA+TGG | 0.486775 | 2_4:+19672961 | None:intergenic |
CTGGAGCTCCTATGGCAGCA+AGG | 0.488303 | 2_4:+19673820 | None:intergenic |
TAGCTTCTCATATACATTGT+GGG | 0.490188 | 2_4:-19671735 | Msa0319760:CDS |
CTTACTGAGCAGAACTCTAC+AGG | 0.491012 | 2_4:-19670946 | Msa0319760:CDS |
AGGCTGGTTAATGTGGCAAC+TGG | 0.492799 | 2_4:-19670890 | Msa0319760:three_prime_UTR |
TAGTCACATTCAAATAATAC+GGG | 0.494409 | 2_4:-19670863 | Msa0319760:three_prime_UTR |
TGGAGCTCCTATGGCAGCAA+GGG | 0.495946 | 2_4:+19673821 | None:intergenic |
ATAGGCTCACAAACCTCATC+CGG | 0.501686 | 2_4:+19676884 | None:intergenic |
CAATCAGCCCTTGCTGCCAT+AGG | 0.506439 | 2_4:-19673828 | Msa0319760:CDS |
AATCAGATTCTTTGCTGTCA+AGG | 0.506715 | 2_4:-19670468 | Msa0319760:three_prime_UTR |
TTTGTTGGATCACCTGGGGT+TGG | 0.506824 | 2_4:-19673634 | Msa0319760:CDS |
GACCACCAAAACGCCATTGA+AGG | 0.508371 | 2_4:+19678354 | None:intergenic |
GAATGTGGCGAATTGATTGT+AGG | 0.510017 | 2_4:-19670292 | Msa0319760:three_prime_UTR |
GATAAAATGCGATTCAATCA+CGG | 0.514380 | 2_4:+19670659 | None:intergenic |
GCTATATGGTCTTAGCATAT+GGG | 0.521718 | 2_4:-19671004 | Msa0319760:CDS |
ATAAAATGCGATTCAATCAC+GGG | 0.524412 | 2_4:+19670660 | None:intergenic |
TCAACTAATGGACAATGTCT+TGG | 0.531835 | 2_4:+19670565 | None:intergenic |
TAGTTAGCACAGGTAGCAGT+TGG | 0.532842 | 2_4:+19670825 | None:intergenic |
AATGACTAATCATGTTAGGC+TGG | 0.533313 | 2_4:-19670906 | Msa0319760:exon |
CTTGCTGGGAAGTATGATAT+GGG | 0.534705 | 2_4:-19672218 | Msa0319760:CDS |
AGGGCTGTTCTTCAGTCAGG+GGG | 0.535804 | 2_4:-19673017 | Msa0319760:CDS |
GAAGTTTAGCTCTGATGAAG+AGG | 0.535852 | 2_4:-19671836 | Msa0319760:CDS |
GTAAATGATGCTTTAGACAA+AGG | 0.536332 | 2_4:-19672152 | Msa0319760:CDS |
TTAGTACGCTCCATGATTGA+CGG | 0.539799 | 2_4:-19670636 | Msa0319760:three_prime_UTR |
TTTCCAGTCTCTGCCATTTG+GGG | 0.540605 | 2_4:-19671289 | Msa0319760:intron |
CAAAGACTAGCTTCAAGCAA+AGG | 0.543389 | 2_4:-19676189 | Msa0319760:CDS |
GGTTGCTCAAATTGCTGTCA+GGG | 0.546154 | 2_4:-19673036 | Msa0319760:CDS |
ATTTGGTGATTTACATGAGT+AGG | 0.546903 | 2_4:-19670528 | Msa0319760:three_prime_UTR |
ATCAGCACATCCAAGGTCGT+TGG | 0.546914 | 2_4:+19670320 | None:intergenic |
GATTTGCTAAACCACTGAGC+AGG | 0.548833 | 2_4:+19670487 | None:intergenic |
TAGTACGCTCCATGATTGAC+GGG | 0.555736 | 2_4:-19670635 | Msa0319760:three_prime_UTR |
TCACATTCACAATCACAGTA+GGG | 0.555942 | 2_4:+19672063 | None:intergenic |
TCAGGTGCCTCCAAGGGGAA+CGG | 0.558856 | 2_4:-19676984 | Msa0319760:intron |
TATATGAGAAGCTATCTCTC+TGG | 0.559110 | 2_4:+19671744 | None:intergenic |
ATTCGGTCATCCGCGGTCGT+TGG | 0.560351 | 2_4:-19670436 | Msa0319760:three_prime_UTR |
TGGTGAAACAGGAGAAGCAC+TGG | 0.562872 | 2_4:-19673680 | Msa0319760:CDS |
AATGAAATTGATGCAAGAAG+AGG | 0.563532 | 2_4:-19672033 | Msa0319760:intron |
ACATAGAGAATAGTTAGCAC+AGG | 0.563797 | 2_4:+19670815 | None:intergenic |
TCATGTTAGGCTGGTTAATG+TGG | 0.563807 | 2_4:-19670897 | Msa0319760:three_prime_UTR |
ATACCAGTTACACTAGAGCT+TGG | 0.564045 | 2_4:-19673179 | Msa0319760:CDS |
AGAAGCACTGGTGTCTTCTG+TGG | 0.565852 | 2_4:-19673668 | Msa0319760:CDS |
ATAGGCTCACTGTGAGATGT+TGG | 0.566457 | 2_4:-19670603 | Msa0319760:three_prime_UTR |
CCAGTTACACTAGAGCTTGG+TGG | 0.568636 | 2_4:-19673176 | Msa0319760:CDS |
AATGTTTGAAACCTGAGTAC+AGG | 0.570318 | 2_4:-19674649 | Msa0319760:intron |
ACAATGGTAGATGCTTCTCT+AGG | 0.573876 | 2_4:-19674725 | Msa0319760:CDS |
AGCTTCTCATATACATTGTG+GGG | 0.574125 | 2_4:-19671734 | Msa0319760:CDS |
CAGGGCTGTTCTTCAGTCAG+GGG | 0.574303 | 2_4:-19673018 | Msa0319760:CDS |
CGTTGGATCAAAGATCGGTC+CGG | 0.575710 | 2_4:-19670419 | Msa0319760:three_prime_UTR |
GAAGCATCAACGTCGATCGA+AGG | 0.577147 | 2_4:+19678264 | None:intergenic |
CAAGGTCGTTGGATCTAGAT+CGG | 0.579834 | 2_4:+19670331 | None:intergenic |
ATGAAGAAAGAAGAGAGTGA+AGG | 0.579970 | 2_4:+19678451 | None:intergenic |
GAACTTTGGGAGGAATGAGA+AGG | 0.580699 | 2_4:+19678286 | None:intergenic |
TCATACTTCCCAGCAAGTGG+TGG | 0.583531 | 2_4:+19672224 | None:intergenic |
TCATCTGTCCTAGTATCCTG+TGG | 0.591006 | 2_4:-19671067 | Msa0319760:intron |
TTCCAGTCTCTGCCATTTGG+GGG | 0.595438 | 2_4:-19671288 | Msa0319760:intron |
GTCGTTGGATCTAGATCGGA+CGG | 0.596954 | 2_4:+19670335 | None:intergenic |
ATCGACGTTGATGCTTCCGA+TGG | 0.598509 | 2_4:-19678258 | Msa0319760:intron |
TTATTGGGGCCATTGTGTCG+TGG | 0.599690 | 2_4:-19674203 | Msa0319760:CDS |
GATACTATGGACAATGGAGA+AGG | 0.602601 | 2_4:+19678497 | None:intergenic |
GGAAGTTGGAAATCAATCGC+AGG | 0.603674 | 2_4:-19678142 | Msa0319760:CDS |
ATAGCTTCTCATATACATTG+TGG | 0.604160 | 2_4:-19671736 | Msa0319760:CDS |
TGAGACAGGTACCTGTACTC+AGG | 0.604776 | 2_4:+19674638 | None:intergenic |
AATGTGGCGAATTGATTGTA+GGG | 0.609833 | 2_4:-19670291 | Msa0319760:three_prime_UTR |
AGATATCAGAACATGCAAGT+TGG | 0.612985 | 2_4:-19673878 | Msa0319760:CDS |
TCACACAATCAGCACATCCA+AGG | 0.613420 | 2_4:+19670313 | None:intergenic |
AATGGCCCCAATAACGCCAA+GGG | 0.615997 | 2_4:+19674212 | None:intergenic |
TGGGAGGAATGAGAAGGAGA+AGG | 0.623716 | 2_4:+19678292 | None:intergenic |
CAATGGCCCCAATAACGCCA+AGG | 0.623770 | 2_4:+19674211 | None:intergenic |
TGCTGCCATAGGAGCTCCAG+AGG | 0.624048 | 2_4:-19673817 | Msa0319760:CDS |
CATACCATCTTACCAACCCC+AGG | 0.625175 | 2_4:+19673622 | None:intergenic |
AGTGGATTTGGACGATTCGG+TGG | 0.625255 | 2_4:-19671255 | Msa0319760:CDS |
AGCTCCAGAGGACCTTGTTG+AGG | 0.625959 | 2_4:-19673805 | Msa0319760:CDS |
ATATCATACTTCCCAGCAAG+TGG | 0.627095 | 2_4:+19672221 | None:intergenic |
TGTTTGTGAAGACGTAGATG+TGG | 0.627212 | 2_4:-19673138 | Msa0319760:CDS |
TAGTTTGATACTATGGACAA+TGG | 0.628866 | 2_4:+19678491 | None:intergenic |
TTCACATTCACAATCACAGT+AGG | 0.630142 | 2_4:+19672062 | None:intergenic |
TCGCTGCATTCGGTCATCCG+CGG | 0.633868 | 2_4:-19670443 | Msa0319760:three_prime_UTR |
GCGGTCGTTGGATCAAAGAT+CGG | 0.639119 | 2_4:-19670424 | Msa0319760:three_prime_UTR |
CACATTCACAATCACAGTAG+GGG | 0.639355 | 2_4:+19672064 | None:intergenic |
GGGCTGTTCTTCAGTCAGGG+GGG | 0.644321 | 2_4:-19673016 | Msa0319760:CDS |
CATACTTCCCAGCAAGTGGT+GGG | 0.644953 | 2_4:+19672225 | None:intergenic |
GCTTATTGGATGATGATACT+GGG | 0.649055 | 2_4:-19670775 | Msa0319760:three_prime_UTR |
GGGATAGTTCCACGACACAA+TGG | 0.651870 | 2_4:+19674194 | None:intergenic |
GGAGCTGAAATTGTTGCACG+TGG | 0.652524 | 2_4:-19672131 | Msa0319760:CDS |
ATGAAGCATTGATCTTCCAG+AGG | 0.652577 | 2_4:+19674260 | None:intergenic |
GCTTCATAAGAGAGCCAGAG+TGG | 0.653340 | 2_4:-19674244 | Msa0319760:CDS |
ACATTCACAATCACAGTAGG+GGG | 0.657269 | 2_4:+19672065 | None:intergenic |
TTTATTCAGGTGCCTCCAAG+GGG | 0.657310 | 2_4:-19676989 | Msa0319760:intron |
TCTTAGTAAATCCTGCTCAG+TGG | 0.660264 | 2_4:-19670498 | Msa0319760:three_prime_UTR |
ATAAATTGGCTATTGTCAGA+GGG | 0.660827 | 2_4:-19674677 | Msa0319760:CDS |
TCGATCGAAGGAACTTTGGG+AGG | 0.662771 | 2_4:+19678276 | None:intergenic |
ACCTTGTTGAGGTGATAACA+GGG | 0.667865 | 2_4:-19673794 | Msa0319760:intron |
CAGTAGTTGAAGATAGATGG+TGG | 0.670419 | 2_4:-19671197 | Msa0319760:CDS |
ATGTGCTGATTGTGTGAATG+TGG | 0.671644 | 2_4:-19670307 | Msa0319760:three_prime_UTR |
ATGGCCCCAATAACGCCAAG+GGG | 0.691262 | 2_4:+19674213 | None:intergenic |
TTTGATTCTATGGATATGGG+TGG | 0.695878 | 2_4:+19678587 | None:intergenic |
ACTGAGCAGAACTCTACAGG+TGG | 0.704579 | 2_4:-19670943 | Msa0319760:CDS |
GATCTTTGATCCAACGACCG+CGG | 0.705515 | 2_4:+19670426 | None:intergenic |
ACCCTGTTATCACCTCAACA+AGG | 0.707587 | 2_4:+19673793 | None:intergenic |
AAATCCCAAATACTTCATGG+TGG | 0.723996 | 2_4:+19676922 | None:intergenic |
TAAAATGCGATTCAATCACG+GGG | 0.729476 | 2_4:+19670661 | None:intergenic |
AGTCACATTCAAATAATACG+GGG | 0.736954 | 2_4:-19670862 | Msa0319760:three_prime_UTR |
TGGCCCCAATAACGCCAAGG+GGG | 0.740602 | 2_4:+19674214 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAATAAAAATAAAAATA+AGG | + | chr2_4:19673888-19673907 | None:intergenic | 0.0% |
!! | AATTAATAAATATTCATCAT+TGG | - | chr2_4:19671139-19671158 | Msa0319760:intron | 10.0% |
!! | AAAAAAAAGTTTAAAAAAAG+AGG | - | chr2_4:19672982-19673001 | Msa0319760:CDS | 10.0% |
!! | TTCAGTATAAATATAAATAA+GGG | + | chr2_4:19676262-19676281 | None:intergenic | 10.0% |
!!! | ATATTTTTCCTTATTTAATT+AGG | + | chr2_4:19676293-19676312 | None:intergenic | 10.0% |
!! | AAGAATTTAATTAGTATACA+TGG | - | chr2_4:19670991-19671010 | Msa0319760:CDS | 15.0% |
!! | TGAATATTTATTAATTGAAG+TGG | + | chr2_4:19671135-19671154 | None:intergenic | 15.0% |
!! | AACTTATGAATTAACATAAA+AGG | - | chr2_4:19671497-19671516 | Msa0319760:intron | 15.0% |
!! | TTTGTTCTTATTCATATTTA+TGG | + | chr2_4:19672460-19672479 | None:intergenic | 15.0% |
!! | AAATTAAGAAGGAAAATTAT+TGG | + | chr2_4:19673085-19673104 | None:intergenic | 15.0% |
!! | TATTGAAATATGTTATAAGT+AGG | + | chr2_4:19673443-19673462 | None:intergenic | 15.0% |
!! | TTAAATGTTAATTTCAACAT+TGG | - | chr2_4:19673695-19673714 | Msa0319760:intron | 15.0% |
!! | TTGAAATTAAAGGAAAAAAA+GGG | + | chr2_4:19675072-19675091 | None:intergenic | 15.0% |
!!! | TTTGAAATTAAAGGAAAAAA+AGG | + | chr2_4:19675073-19675092 | None:intergenic | 15.0% |
!! | GTTCAGTATAAATATAAATA+AGG | + | chr2_4:19676263-19676282 | None:intergenic | 15.0% |
!!! | ACTATATTTTCACTTATTAA+TGG | - | chr2_4:19676492-19676511 | Msa0319760:intron | 15.0% |
!!! | TCTTAATACTAAATATTTTG+CGG | + | chr2_4:19676532-19676551 | None:intergenic | 15.0% |
!! | AAATTTGATTCTATGGATAT+GGG | + | chr2_4:19670238-19670257 | None:intergenic | 20.0% |
!! | AAAATTTGATTCTATGGATA+TGG | + | chr2_4:19670239-19670258 | None:intergenic | 20.0% |
!! | TATAAGATGAAATGAAAGTA+AGG | + | chr2_4:19670265-19670284 | None:intergenic | 20.0% |
!! | ATTGATATAGTTTGATACTA+TGG | + | chr2_4:19670338-19670357 | None:intergenic | 20.0% |
!!! | TTAATTTTGTTAGATCGATT+TGG | - | chr2_4:19670807-19670826 | Msa0319760:three_prime_UTR | 20.0% |
!! | GTAAAATAATTGTACACTTA+CGG | + | chr2_4:19671090-19671109 | None:intergenic | 20.0% |
!! | ATCATATTCCAAATATTTCA+TGG | + | chr2_4:19672025-19672044 | None:intergenic | 20.0% |
!! | AAAAAATACTCCATTCAAAT+AGG | + | chr2_4:19672098-19672117 | None:intergenic | 20.0% |
!!! | TTTTAGAAGTAATATAACAG+AGG | + | chr2_4:19672176-19672195 | None:intergenic | 20.0% |
!! | AGAGACAAAAAAATATCAAA+GGG | - | chr2_4:19672352-19672371 | Msa0319760:intron | 20.0% |
!! | AAATTAGTACAAGTTAACTA+TGG | + | chr2_4:19672551-19672570 | None:intergenic | 20.0% |
!! | ACTTGTACTAATTTGATATA+TGG | - | chr2_4:19672557-19672576 | Msa0319760:intron | 20.0% |
!! | TACTAATTTGATATATGGAT+AGG | - | chr2_4:19672562-19672581 | Msa0319760:intron | 20.0% |
!! | AAAAATGTTAATTTCCACAT+TGG | + | chr2_4:19672959-19672978 | None:intergenic | 20.0% |
!! | TGGTAAAACTAAAATAAAGA+GGG | + | chr2_4:19673065-19673084 | None:intergenic | 20.0% |
!! | TTGGTAAAACTAAAATAAAG+AGG | + | chr2_4:19673066-19673085 | None:intergenic | 20.0% |
!! | AATTAGATATATTAGCAGAT+AGG | - | chr2_4:19673488-19673507 | Msa0319760:intron | 20.0% |
!!! | AAAATCACTCATTTTAAACT+TGG | - | chr2_4:19673811-19673830 | Msa0319760:CDS | 20.0% |
!!! | AAATCACTCATTTTAAACTT+GGG | - | chr2_4:19673812-19673831 | Msa0319760:CDS | 20.0% |
!!! | TTAATTGTTAGTCTGAAAAA+TGG | - | chr2_4:19673978-19673997 | Msa0319760:intron | 20.0% |
!! | AGAAAGAAAAAAAAAACTGT+AGG | + | chr2_4:19674437-19674456 | None:intergenic | 20.0% |
!! | TATCTACTTTCATAAAAACA+TGG | + | chr2_4:19674780-19674799 | None:intergenic | 20.0% |
!!! | TTTTTAGTATCAAGTGTTAA+TGG | + | chr2_4:19674840-19674859 | None:intergenic | 20.0% |
!!! | TGTAACAGATTTTATGATTT+TGG | + | chr2_4:19675899-19675918 | None:intergenic | 20.0% |
!!! | TATTATGAAATTTTGCAAGA+CGG | - | chr2_4:19676089-19676108 | Msa0319760:intron | 20.0% |
!! | CTTCTAATCCTAATTAAATA+AGG | - | chr2_4:19676282-19676301 | Msa0319760:intron | 20.0% |
!! | TAAGGAAAAATATCATGATA+TGG | - | chr2_4:19676300-19676319 | Msa0319760:intron | 20.0% |
!! | TCAATGTTAATATAATCTGT+GGG | + | chr2_4:19676445-19676464 | None:intergenic | 20.0% |
!! | TTCAATGTTAATATAATCTG+TGG | + | chr2_4:19676446-19676465 | None:intergenic | 20.0% |
!! | TATATTAACATTGAAAACTG+AGG | - | chr2_4:19676451-19676470 | Msa0319760:intron | 20.0% |
!!! | AGACATTTTCAAATAATAGT+TGG | + | chr2_4:19676878-19676897 | None:intergenic | 20.0% |
!! | AGAGAAACAACTAAAATATT+AGG | - | chr2_4:19677268-19677287 | Msa0319760:intron | 20.0% |
!!! | ACATTTTGTTTTAGTACTAT+CGG | - | chr2_4:19677439-19677458 | Msa0319760:intron | 20.0% |
!! | AGTTTGTATGATATAATGAA+AGG | + | chr2_4:19677698-19677717 | None:intergenic | 20.0% |
!! | ATAGTCACATTCAAATAATA+CGG | - | chr2_4:19677955-19677974 | Msa0319760:intron | 20.0% |
!!! | TAAAGTTATCTTGCTATATA+AGG | + | chr2_4:19678100-19678119 | None:intergenic | 20.0% |
!! | ATTAAAAACAACAATGAATC+CGG | + | chr2_4:19678422-19678441 | None:intergenic | 20.0% |
! | AGGAACAAAATTTGATTCTA+TGG | + | chr2_4:19670245-19670264 | None:intergenic | 25.0% |
!!! | AAAAGAAAACTGGTTTGTTA+GGG | + | chr2_4:19670442-19670461 | None:intergenic | 25.0% |
! | TTCACTTTGATTGTAAATTG+TGG | - | chr2_4:19670863-19670882 | Msa0319760:three_prime_UTR | 25.0% |
! | TATTATTCATAAGCTTGTCA+AGG | - | chr2_4:19671427-19671446 | Msa0319760:intron | 25.0% |
! | AATAAGCTACAAACAACTTA+TGG | + | chr2_4:19671614-19671633 | None:intergenic | 25.0% |
!!! | GTTGTTTTCATAAGCTATTA+TGG | + | chr2_4:19671649-19671668 | None:intergenic | 25.0% |
!!! | TTGTAATTTTTTCCCCTTTT+TGG | - | chr2_4:19671784-19671803 | Msa0319760:CDS | 25.0% |
!! | TTGTCTCTGTATAAATTTTG+AGG | + | chr2_4:19672340-19672359 | None:intergenic | 25.0% |
! | CAGAGACAAAAAAATATCAA+AGG | - | chr2_4:19672351-19672370 | Msa0319760:intron | 25.0% |
! | ATGAATGAAATTAGTCAAAC+TGG | + | chr2_4:19672514-19672533 | None:intergenic | 25.0% |
! | AGTTTGACTAATTTCATTCA+TGG | - | chr2_4:19672513-19672532 | Msa0319760:intron | 25.0% |
! | GTTTGACTAATTTCATTCAT+GGG | - | chr2_4:19672514-19672533 | Msa0319760:intron | 25.0% |
!!! | CAGGTGTTAGTTTTATTTTT+AGG | - | chr2_4:19672750-19672769 | Msa0319760:intron | 25.0% |
!! | TTTAGGCTTAATTTCACTTT+TGG | - | chr2_4:19672767-19672786 | Msa0319760:intron | 25.0% |
!! | ATCACTCATTTTAAACTTGA+GGG | + | chr2_4:19672827-19672846 | None:intergenic | 25.0% |
!! | AATCACTCATTTTAAACTTG+AGG | + | chr2_4:19673813-19673832 | None:intergenic | 25.0% |
! | AACTAGAGTGAAAATTAAGA+AGG | + | chr2_4:19673096-19673115 | None:intergenic | 25.0% |
! | AGTATGATTGAGTATTAGTT+TGG | + | chr2_4:19673210-19673229 | None:intergenic | 25.0% |
! | GATAATGCATAATATATGCA+AGG | - | chr2_4:19673315-19673334 | Msa0319760:intron | 25.0% |
!! | ATGCGTGTTTTATCTTTTTT+TGG | + | chr2_4:19673366-19673385 | None:intergenic | 25.0% |
! | AATATATCACAATGTACTAG+TGG | - | chr2_4:19673459-19673478 | Msa0319760:intron | 25.0% |
!!! | TTAGCCACGTTATTATTTTT+TGG | - | chr2_4:19673748-19673767 | Msa0319760:intron | 25.0% |
! | TTGACCAAAAAATAATAACG+TGG | + | chr2_4:19673755-19673774 | None:intergenic | 25.0% |
!!! | TTTTTTGGTCAAAATATGCA+TGG | - | chr2_4:19673763-19673782 | Msa0319760:intron | 25.0% |
!!! | TTTTTGGTCAAAATATGCAT+GGG | - | chr2_4:19673764-19673783 | Msa0319760:intron | 25.0% |
!! | AATCACTCATTTTAAACTTG+GGG | - | chr2_4:19673813-19673832 | Msa0319760:CDS | 25.0% |
!! | AATAAGGCTTAATTGCATTT+TGG | + | chr2_4:19673872-19673891 | None:intergenic | 25.0% |
! | TTAATGTATTGCGAAACAAA+AGG | + | chr2_4:19674527-19674546 | None:intergenic | 25.0% |
! | GGGTTAAAAATATTATGGAA+GGG | + | chr2_4:19674648-19674667 | None:intergenic | 25.0% |
! | AGGGTTAAAAATATTATGGA+AGG | + | chr2_4:19674649-19674668 | None:intergenic | 25.0% |
! | GCATAGGGTTAAAAATATTA+TGG | + | chr2_4:19674653-19674672 | None:intergenic | 25.0% |
!!! | CTCTAAAATTGTTCATCATA+TGG | - | chr2_4:19674746-19674765 | Msa0319760:CDS | 25.0% |
! | AAAATTGTTCATCATATGGA+TGG | - | chr2_4:19674750-19674769 | Msa0319760:CDS | 25.0% |
! | ACTGAAAAATATAAACACAG+AGG | + | chr2_4:19674892-19674911 | None:intergenic | 25.0% |
! | AATTAAAGGAAAAAAAGGGA+GGG | + | chr2_4:19675068-19675087 | None:intergenic | 25.0% |
! | AAATTAAAGGAAAAAAAGGG+AGG | + | chr2_4:19675069-19675088 | None:intergenic | 25.0% |
!!! | AGACATGACTTTGAAATTAA+AGG | + | chr2_4:19675082-19675101 | None:intergenic | 25.0% |
!! | AAGAATTTTCCTAGAATACT+TGG | - | chr2_4:19675344-19675363 | Msa0319760:intron | 25.0% |
!! | TTTTCTTGTGAGTACAAAAT+GGG | + | chr2_4:19675405-19675424 | None:intergenic | 25.0% |
!! | AAGAATAGAAGAAGCATATA+CGG | + | chr2_4:19675527-19675546 | None:intergenic | 25.0% |
! | ATAATAGATATACTGATGAG+AGG | - | chr2_4:19676387-19676406 | Msa0319760:intron | 25.0% |
!!! | TAACCAAAAGCTTTAAAGAA+CGG | + | chr2_4:19676558-19676577 | None:intergenic | 25.0% |
! | TTGCTAATGACTCAAAATAT+GGG | - | chr2_4:19677015-19677034 | Msa0319760:intron | 25.0% |
! | GCTTCAATGGAAATTTAAAA+AGG | + | chr2_4:19677493-19677512 | None:intergenic | 25.0% |
!! | AGAAAATGGATTTGAATTTC+AGG | - | chr2_4:19677776-19677795 | Msa0319760:intron | 25.0% |
! | TAGTCACATTCAAATAATAC+GGG | - | chr2_4:19677956-19677975 | Msa0319760:intron | 25.0% |
! | AATAAGCACAACAAAAATGA+CGG | + | chr2_4:19678031-19678050 | None:intergenic | 25.0% |
! | ATAAAAACCAAGCTTGAAAT+TGG | - | chr2_4:19678460-19678479 | Msa0319760:five_prime_UTR | 25.0% |
TAGTTTGATACTATGGACAA+TGG | + | chr2_4:19670331-19670350 | None:intergenic | 30.0% | |
!! | GAAAAGAAAACTGGTTTGTT+AGG | + | chr2_4:19670443-19670462 | None:intergenic | 30.0% |
TTGAAGGAAGAAAAGAAAAC+TGG | + | chr2_4:19670452-19670471 | None:intergenic | 30.0% | |
! | GTTTTCTTTTCTTCCTTCAA+TGG | - | chr2_4:19670452-19670471 | Msa0319760:three_prime_UTR | 30.0% |
TGTTTGATTAATTGCAGTGT+TGG | - | chr2_4:19670656-19670675 | Msa0319760:three_prime_UTR | 30.0% | |
TCATACATTTCTTTGATGCT+TGG | - | chr2_4:19670755-19670774 | Msa0319760:three_prime_UTR | 30.0% | |
!!! | GATCGATTTGGTTTTACTTT+TGG | - | chr2_4:19670819-19670838 | Msa0319760:three_prime_UTR | 30.0% |
ATGTGTAAAATAACTCTACC+TGG | - | chr2_4:19671166-19671185 | Msa0319760:CDS | 30.0% | |
TTGAGTTTATCTAGTGACAA+TGG | - | chr2_4:19671319-19671338 | Msa0319760:intron | 30.0% | |
CAAAAATAAGCCAATCCAAA+CGG | - | chr2_4:19671553-19671572 | Msa0319760:intron | 30.0% | |
TTAAGCTGTTTATCCAAACA+GGG | - | chr2_4:19671745-19671764 | Msa0319760:CDS | 30.0% | |
ATAAAAAGCAATCGATCAAC+TGG | + | chr2_4:19671815-19671834 | None:intergenic | 30.0% | |
!!! | TGATCGATTGCTTTTTATTC+AGG | - | chr2_4:19671817-19671836 | Msa0319760:CDS | 30.0% |
AAGAAATCCCAAATACTTCA+TGG | + | chr2_4:19671903-19671922 | None:intergenic | 30.0% | |
TTAACTAACTGAAAAGCAAG+CGG | - | chr2_4:19671999-19672018 | Msa0319760:intron | 30.0% | |
ATAGTATAGCTAAGATAGCA+AGG | - | chr2_4:19672047-19672066 | Msa0319760:CDS | 30.0% | |
TCAAAGGGAATAAAACTAGT+TGG | - | chr2_4:19672367-19672386 | Msa0319760:intron | 30.0% | |
CAAAGGGAATAAAACTAGTT+GGG | - | chr2_4:19672368-19672387 | Msa0319760:intron | 30.0% | |
TTTGATATATGGATAGGTCA+AGG | - | chr2_4:19672568-19672587 | Msa0319760:intron | 30.0% | |
TCAGTAGTATACGTAAAAAC+TGG | + | chr2_4:19672658-19672677 | None:intergenic | 30.0% | |
ATTGCACAATTGTGAAACTT+GGG | + | chr2_4:19672796-19672815 | None:intergenic | 30.0% | |
AATTGCACAATTGTGAAACT+TGG | + | chr2_4:19672797-19672816 | None:intergenic | 30.0% | |
! | TCACTCATTTTAAACTTGAG+GGG | + | chr2_4:19672826-19672845 | None:intergenic | 30.0% |
!! | TTTTTGGTCAAAATGTGCAT+GGG | + | chr2_4:19672890-19672909 | None:intergenic | 30.0% |
!!! | TTTTTTGGTCAAAATGTGCA+TGG | + | chr2_4:19672891-19672910 | None:intergenic | 30.0% |
! | TTGACCAAAAAATGATGATG+TGG | - | chr2_4:19672899-19672918 | Msa0319760:intron | 30.0% |
!!! | TTAGCCACATCATCATTTTT+TGG | + | chr2_4:19672906-19672925 | None:intergenic | 30.0% |
AGTTGAGACTTTATGGTTAT+TGG | + | chr2_4:19673153-19673172 | None:intergenic | 30.0% | |
!! | ACGATTAAGTTGAGACTTTA+TGG | + | chr2_4:19673160-19673179 | None:intergenic | 30.0% |
!!! | CGTGTTTTATCTTTTTTTGG+TGG | + | chr2_4:19673363-19673382 | None:intergenic | 30.0% |
TAGATATATTAGCAGATAGG+AGG | - | chr2_4:19673491-19673510 | Msa0319760:intron | 30.0% | |
! | TTTTGGTCAAAATATGCATG+GGG | - | chr2_4:19673765-19673784 | Msa0319760:intron | 30.0% |
! | ATCACTCATTTTAAACTTGG+GGG | - | chr2_4:19673814-19673833 | Msa0319760:CDS | 30.0% |
! | TCTGAAAAATGGATTTGAAC+TGG | - | chr2_4:19673989-19674008 | Msa0319760:intron | 30.0% |
! | CTGAAAAATGGATTTGAACT+GGG | - | chr2_4:19673990-19674009 | Msa0319760:intron | 30.0% |
!! | CTAACTTGTGTCCTTTTATT+AGG | - | chr2_4:19674047-19674066 | Msa0319760:intron | 30.0% |
CGTGAAGATATCCTAATAAA+AGG | + | chr2_4:19674061-19674080 | None:intergenic | 30.0% | |
CAACATGTGAGAAGATAAAT+TGG | - | chr2_4:19674128-19674147 | Msa0319760:intron | 30.0% | |
ATAAATTGGCTATTGTCAGA+GGG | - | chr2_4:19674142-19674161 | Msa0319760:CDS | 30.0% | |
AACACAAAAAAGATTGAGAC+AGG | + | chr2_4:19674198-19674217 | None:intergenic | 30.0% | |
AGAGAAAAGAGTCAATTACT+GGG | + | chr2_4:19674319-19674338 | None:intergenic | 30.0% | |
TGGAAATGGAATTGTGATTA+AGG | - | chr2_4:19674689-19674708 | Msa0319760:CDS | 30.0% | |
AGTAGATATTGTTAACTGTC+AGG | - | chr2_4:19674792-19674811 | Msa0319760:intron | 30.0% | |
AAATATAAACACAGAGGAGT+AGG | + | chr2_4:19674886-19674905 | None:intergenic | 30.0% | |
TATCTACAATCAGAATCACA+AGG | + | chr2_4:19674926-19674945 | None:intergenic | 30.0% | |
TCTGCAAGTATAATCTCAAT+TGG | - | chr2_4:19675099-19675118 | Msa0319760:intron | 30.0% | |
!!! | GTGGATAAAGTCATTTTTGT+TGG | - | chr2_4:19675170-19675189 | Msa0319760:intron | 30.0% |
AAACATTGACCAAGTATTCT+AGG | + | chr2_4:19675356-19675375 | None:intergenic | 30.0% | |
! | TCAATGTTTAGAGTAGCATT+TGG | - | chr2_4:19675367-19675386 | Msa0319760:intron | 30.0% |
TTTCTTGTGAGTACAAAATG+GGG | + | chr2_4:19675404-19675423 | None:intergenic | 30.0% | |
! | CTTTTCTTGTGAGTACAAAA+TGG | + | chr2_4:19675406-19675425 | None:intergenic | 30.0% |
TTCAACAACGAATGCATAAT+GGG | + | chr2_4:19675726-19675745 | None:intergenic | 30.0% | |
ATTCAACAACGAATGCATAA+TGG | + | chr2_4:19675727-19675746 | None:intergenic | 30.0% | |
! | ATTAGTGGGTGTTAAAACTA+TGG | + | chr2_4:19675751-19675770 | None:intergenic | 30.0% |
AAGATGGATAAATGTTCCTA+TGG | + | chr2_4:19675861-19675880 | None:intergenic | 30.0% | |
ATGTTACAAATGAAAGGTCA+TGG | + | chr2_4:19675949-19675968 | None:intergenic | 30.0% | |
AGACAGATGTTACAAATGAA+AGG | + | chr2_4:19675955-19675974 | None:intergenic | 30.0% | |
AATTTCTTTCCAAGTCAACA+TGG | - | chr2_4:19675980-19675999 | Msa0319760:intron | 30.0% | |
ATTTCTTTCCAAGTCAACAT+GGG | - | chr2_4:19675981-19676000 | Msa0319760:intron | 30.0% | |
CAGAAATGCAACAAAAATAG+AGG | + | chr2_4:19676142-19676161 | None:intergenic | 30.0% | |
! | TCGTTTTCTATTTTCCTTAG+AGG | - | chr2_4:19676168-19676187 | Msa0319760:CDS | 30.0% |
! | CGTTTTCTATTTTCCTTAGA+GGG | - | chr2_4:19676169-19676188 | Msa0319760:CDS | 30.0% |
AATAACTAATGCTGAGAAGT+TGG | - | chr2_4:19676351-19676370 | Msa0319760:intron | 30.0% | |
ATAACTAATGCTGAGAAGTT+GGG | - | chr2_4:19676352-19676371 | Msa0319760:intron | 30.0% | |
TTCACTTATTAATGGAGCAT+AGG | - | chr2_4:19676500-19676519 | Msa0319760:intron | 30.0% | |
TCACTTATTAATGGAGCATA+GGG | - | chr2_4:19676501-19676520 | Msa0319760:intron | 30.0% | |
TTTGGTTAATGATTTCTTGC+AGG | - | chr2_4:19676570-19676589 | Msa0319760:intron | 30.0% | |
TTGGTTAATGATTTCTTGCA+GGG | - | chr2_4:19676571-19676590 | Msa0319760:intron | 30.0% | |
! | GTAAATGATGCTTTAGACAA+AGG | - | chr2_4:19676667-19676686 | Msa0319760:intron | 30.0% |
AATGAAATTGATGCAAGAAG+AGG | - | chr2_4:19676786-19676805 | Msa0319760:intron | 30.0% | |
ATATCCAATGCTTGTAGTAA+AGG | + | chr2_4:19676819-19676838 | None:intergenic | 30.0% | |
TCAGAGCTAAACTTCATTAT+CGG | + | chr2_4:19676978-19676997 | None:intergenic | 30.0% | |
CTTGCTAATGACTCAAAATA+TGG | - | chr2_4:19677014-19677033 | Msa0319760:intron | 30.0% | |
ATAGCTTCTCATATACATTG+TGG | - | chr2_4:19677083-19677102 | Msa0319760:intron | 30.0% | |
TAGCTTCTCATATACATTGT+GGG | - | chr2_4:19677084-19677103 | Msa0319760:intron | 30.0% | |
TTTCTCTTGTTCTTTAGCAA+TGG | + | chr2_4:19677255-19677274 | None:intergenic | 30.0% | |
CAACTAAAATATTAGGAGCA+TGG | - | chr2_4:19677275-19677294 | Msa0319760:intron | 30.0% | |
ATGTGAACAAAACGTTAGAT+TGG | + | chr2_4:19677324-19677343 | None:intergenic | 30.0% | |
ATTTGAACCATGATTCTATC+CGG | + | chr2_4:19677367-19677386 | None:intergenic | 30.0% | |
AATCATGGTTCAAATGCAAT+TGG | - | chr2_4:19677372-19677391 | Msa0319760:intron | 30.0% | |
! | AAATTTAAAAAGGTACACGC+AGG | + | chr2_4:19677483-19677502 | None:intergenic | 30.0% |
GGTATCTTTGTCTTAATGAA+TGG | + | chr2_4:19677648-19677667 | None:intergenic | 30.0% | |
!!! | TTTTTTAGACAGACCTGAAT+AGG | + | chr2_4:19677675-19677694 | None:intergenic | 30.0% |
GAGAAATGACTAATCATGTT+AGG | - | chr2_4:19677909-19677928 | Msa0319760:intron | 30.0% | |
AGTCACATTCAAATAATACG+GGG | - | chr2_4:19677957-19677976 | Msa0319760:intron | 30.0% | |
ATAAGCACAACAAAAATGAC+GGG | + | chr2_4:19678030-19678049 | None:intergenic | 30.0% | |
!!! | GTCATTTTTGTTGTGCTTAT+TGG | - | chr2_4:19678030-19678049 | Msa0319760:intron | 30.0% |
ATAAAATGCGATTCAATCAC+GGG | + | chr2_4:19678162-19678181 | None:intergenic | 30.0% | |
GATAAAATGCGATTCAATCA+CGG | + | chr2_4:19678163-19678182 | None:intergenic | 30.0% | |
!!! | TGAGTGTTTGTGGTTTTATT+TGG | - | chr2_4:19678274-19678293 | Msa0319760:CDS | 30.0% |
! | ATTTGGTGATTTACATGAGT+AGG | - | chr2_4:19678291-19678310 | Msa0319760:CDS | 30.0% |
TTTGATTCTATGGATATGGG+TGG | + | chr2_4:19670235-19670254 | None:intergenic | 35.0% | |
ATGAAGAAAGAAGAGAGTGA+AGG | + | chr2_4:19670371-19670390 | None:intergenic | 35.0% | |
!! | CTAGAGAGTTCTATTTCTGT+TGG | + | chr2_4:19670405-19670424 | None:intergenic | 35.0% |
!! | AAAACTGGTTTGTTAGGGTT+TGG | + | chr2_4:19670437-19670456 | None:intergenic | 35.0% |
TGAACGAAGAAGATTACCAT+CGG | + | chr2_4:19670580-19670599 | None:intergenic | 35.0% | |
! | TTAATTGCAGTGTTGGAAGT+TGG | - | chr2_4:19670663-19670682 | Msa0319760:three_prime_UTR | 35.0% |
GTAAAATAACTCTACCTGGT+CGG | - | chr2_4:19671170-19671189 | Msa0319760:CDS | 35.0% | |
ACACTTGTGAAACTACTGTT+TGG | - | chr2_4:19671347-19671366 | Msa0319760:intron | 35.0% | |
TGTGAAACTACTGTTTGGAT+TGG | - | chr2_4:19671352-19671371 | Msa0319760:intron | 35.0% | |
GTTAAGCTGTTTATCCAAAC+AGG | - | chr2_4:19671744-19671763 | Msa0319760:CDS | 35.0% | |
ATTACAAACCACTAACGCTA+AGG | + | chr2_4:19671771-19671790 | None:intergenic | 35.0% | |
TCAACTGGATTCTCCAAAAA+GGG | + | chr2_4:19671800-19671819 | None:intergenic | 35.0% | |
ATCAACTGGATTCTCCAAAA+AGG | + | chr2_4:19671801-19671820 | None:intergenic | 35.0% | |
AAATCCCAAATACTTCATGG+TGG | + | chr2_4:19671900-19671919 | None:intergenic | 35.0% | |
TCTTGAGAAGCAATAAGCAT+AGG | + | chr2_4:19671956-19671975 | None:intergenic | 35.0% | |
ATGCACAATGCCTATTTGAA+TGG | - | chr2_4:19672085-19672104 | Msa0319760:CDS | 35.0% | |
TCTTCTAATCATAACTCACC+AGG | - | chr2_4:19672147-19672166 | Msa0319760:CDS | 35.0% | |
ATCCTATCATATATCTCACC+GGG | + | chr2_4:19672218-19672237 | None:intergenic | 35.0% | |
CATCCTATCATATATCTCAC+CGG | + | chr2_4:19672219-19672238 | None:intergenic | 35.0% | |
TTAATGACTATGCGCTAAGA+GGG | + | chr2_4:19672262-19672281 | None:intergenic | 35.0% | |
TTTAATGACTATGCGCTAAG+AGG | + | chr2_4:19672263-19672282 | None:intergenic | 35.0% | |
AGGAGCGAATTGAAAAAGTA+CGG | - | chr2_4:19672588-19672607 | Msa0319760:intron | 35.0% | |
TGATCTTCAAACTATGACCA+TGG | + | chr2_4:19672732-19672751 | None:intergenic | 35.0% | |
ATGGTCATAGTTTGAAGATC+AGG | - | chr2_4:19672731-19672750 | Msa0319760:intron | 35.0% | |
TTGCACAATTGTGAAACTTG+GGG | + | chr2_4:19672795-19672814 | None:intergenic | 35.0% | |
! | TTTTGGTCAAAATGTGCATG+GGG | + | chr2_4:19672889-19672908 | None:intergenic | 35.0% |
TGTGGCTAATTTCAATGACA+TGG | - | chr2_4:19672917-19672936 | Msa0319760:intron | 35.0% | |
!! | TTTGGTTCACACATTTTCTG+CGG | + | chr2_4:19673192-19673211 | None:intergenic | 35.0% |
! | TTATCAACGCTGCATTTTTG+TGG | + | chr2_4:19673253-19673272 | None:intergenic | 35.0% |
TGCATAATATATGCAAGGTC+TGG | - | chr2_4:19673320-19673339 | Msa0319760:intron | 35.0% | |
GCATAATATATGCAAGGTCT+GGG | - | chr2_4:19673321-19673340 | Msa0319760:intron | 35.0% | |
CATAATATATGCAAGGTCTG+GGG | - | chr2_4:19673322-19673341 | Msa0319760:intron | 35.0% | |
!!! | ATCTTTTTTTGGTGGTGTCT+GGG | + | chr2_4:19673355-19673374 | None:intergenic | 35.0% |
!!! | TATCTTTTTTTGGTGGTGTC+TGG | + | chr2_4:19673356-19673375 | None:intergenic | 35.0% |
GTGCTATCTATGGAAGAAAT+GGG | - | chr2_4:19673537-19673556 | Msa0319760:intron | 35.0% | |
TGCTATCTATGGAAGAAATG+GGG | - | chr2_4:19673538-19673557 | Msa0319760:intron | 35.0% | |
TTTGGTCAAAATATGCATGG+GGG | - | chr2_4:19673766-19673785 | Msa0319760:intron | 35.0% | |
! | GTTTCACAATTGTGCGATTT+TGG | + | chr2_4:19673841-19673860 | None:intergenic | 35.0% |
TCGCACAATTGTGAAACTTT+AGG | - | chr2_4:19673844-19673863 | Msa0319760:CDS | 35.0% | |
CGCACAATTGTGAAACTTTA+GGG | - | chr2_4:19673845-19673864 | Msa0319760:CDS | 35.0% | |
GCACAATTGTGAAACTTTAG+GGG | - | chr2_4:19673846-19673865 | Msa0319760:CDS | 35.0% | |
ACGTGATACTGGAAAAACAA+TGG | - | chr2_4:19674078-19674097 | Msa0319760:intron | 35.0% | |
GATAAATTGGCTATTGTCAG+AGG | - | chr2_4:19674141-19674160 | Msa0319760:CDS | 35.0% | |
! | AATGTTTGAAACCTGAGTAC+AGG | - | chr2_4:19674170-19674189 | Msa0319760:CDS | 35.0% |
CAGAGAAAAGAGTCAATTAC+TGG | + | chr2_4:19674320-19674339 | None:intergenic | 35.0% | |
ATGTATTGCGAAACAAAAGG+TGG | + | chr2_4:19674524-19674543 | None:intergenic | 35.0% | |
TTAAAAACATGCAGATCCTC+TGG | - | chr2_4:19674543-19674562 | Msa0319760:intron | 35.0% | |
AAAAAACTGCTGCTAGCATA+GGG | + | chr2_4:19674668-19674687 | None:intergenic | 35.0% | |
ATGGAACATTGTTAACTGTC+AGG | + | chr2_4:19674821-19674840 | None:intergenic | 35.0% | |
AGATATCAGAACATGCAAGT+TGG | - | chr2_4:19674941-19674960 | Msa0319760:intron | 35.0% | |
!! | TCATTTTTGTTGGATCACCT+GGG | - | chr2_4:19675180-19675199 | Msa0319760:intron | 35.0% |
GTTCCTTAAGCCAATCAAAT+TGG | - | chr2_4:19675220-19675239 | Msa0319760:intron | 35.0% | |
!! | GAACCAATTTGATTGGCTTA+AGG | + | chr2_4:19675226-19675245 | None:intergenic | 35.0% |
ACAGGATGAACCAATTTGAT+TGG | + | chr2_4:19675233-19675252 | None:intergenic | 35.0% | |
!!! | ACTCACTGATTTTGCTTAAC+GGG | + | chr2_4:19675474-19675493 | None:intergenic | 35.0% |
!!! | CACTCACTGATTTTGCTTAA+CGG | + | chr2_4:19675475-19675494 | None:intergenic | 35.0% |
AATCAGTGAGTGAGATAGTT+TGG | - | chr2_4:19675483-19675502 | Msa0319760:intron | 35.0% | |
ATCAGTGAGTGAGATAGTTT+GGG | - | chr2_4:19675484-19675503 | Msa0319760:intron | 35.0% | |
TCAACAACGAATGCATAATG+GGG | + | chr2_4:19675725-19675744 | None:intergenic | 35.0% | |
! | CTGAACGATTTTATGTCCAT+AGG | - | chr2_4:19675842-19675861 | Msa0319760:intron | 35.0% |
GTAACTTTGCTGACAAAAGA+TGG | + | chr2_4:19675877-19675896 | None:intergenic | 35.0% | |
ATTCTGTAAGAATCAAGTGC+AGG | + | chr2_4:19676023-19676042 | None:intergenic | 35.0% | |
GAACCAATGTAAAGTTAAGC+TGG | + | chr2_4:19676064-19676083 | None:intergenic | 35.0% | |
ATTTCTTTCTCTTCCCTCTA+AGG | + | chr2_4:19676185-19676204 | None:intergenic | 35.0% | |
TAGATATACTGATGAGAGGA+AGG | - | chr2_4:19676391-19676410 | Msa0319760:intron | 35.0% | |
AGATATACTGATGAGAGGAA+GGG | - | chr2_4:19676392-19676411 | Msa0319760:intron | 35.0% | |
CACTTATTAATGGAGCATAG+GGG | - | chr2_4:19676502-19676521 | Msa0319760:intron | 35.0% | |
!!! | AGTCCGTTCTTTAAAGCTTT+TGG | - | chr2_4:19676552-19676571 | Msa0319760:intron | 35.0% |
! | GAACATTCTGAAAAGCTTCT+AGG | - | chr2_4:19676640-19676659 | Msa0319760:intron | 35.0% |
TCACATTCACAATCACAGTA+GGG | + | chr2_4:19676759-19676778 | None:intergenic | 35.0% | |
TTCACATTCACAATCACAGT+AGG | + | chr2_4:19676760-19676779 | None:intergenic | 35.0% | |
CTTGCATCAATTTCATTGAG+TGG | + | chr2_4:19676783-19676802 | None:intergenic | 35.0% | |
CAAACCTTTACTACAAGCAT+TGG | - | chr2_4:19676812-19676831 | Msa0319760:intron | 35.0% | |
TGAATCTAGTAAGCAGTTGT+TGG | + | chr2_4:19676917-19676936 | None:intergenic | 35.0% | |
! | CATCTGTGCATTTGACTTAT+AGG | - | chr2_4:19676935-19676954 | Msa0319760:CDS | 35.0% |
! | GCATTTGACTTATAGGCATT+TGG | - | chr2_4:19676942-19676961 | Msa0319760:CDS | 35.0% |
AACTTCATTATCGGCATGAT+AGG | + | chr2_4:19676969-19676988 | None:intergenic | 35.0% | |
TATATGAGAAGCTATCTCTC+TGG | + | chr2_4:19677078-19677097 | None:intergenic | 35.0% | |
AGCTTCTCATATACATTGTG+GGG | - | chr2_4:19677085-19677104 | Msa0319760:intron | 35.0% | |
TTGTGAAATTCAGACTAGAC+TGG | - | chr2_4:19677298-19677317 | Msa0319760:intron | 35.0% | |
! | TCAAATGCAATTGGTTCAGT+CGG | - | chr2_4:19677381-19677400 | Msa0319760:intron | 35.0% |
AGAATGCAACTTTGCTTCAA+TGG | + | chr2_4:19677506-19677525 | None:intergenic | 35.0% | |
!! | CTTCAACTACTGACTTTACA+AGG | + | chr2_4:19677614-19677633 | None:intergenic | 35.0% |
AGTCAGTAGTTGAAGATAGA+TGG | - | chr2_4:19677619-19677638 | Msa0319760:intron | 35.0% | |
AAAGATACCAAAGCCTATTC+AGG | - | chr2_4:19677659-19677678 | Msa0319760:intron | 35.0% | |
CATACAAACTACACTGTTAG+TGG | - | chr2_4:19677708-19677727 | Msa0319760:intron | 35.0% | |
! | GCTATATGGTCTTAGCATAT+GGG | - | chr2_4:19677815-19677834 | Msa0319760:intron | 35.0% |
AATGACTAATCATGTTAGGC+TGG | - | chr2_4:19677913-19677932 | Msa0319760:intron | 35.0% | |
ACATAGAGAATAGTTAGCAC+AGG | + | chr2_4:19678007-19678026 | None:intergenic | 35.0% | |
TGCTTATTGGATGATGATAC+TGG | - | chr2_4:19678043-19678062 | Msa0319760:intron | 35.0% | |
GCTTATTGGATGATGATACT+GGG | - | chr2_4:19678044-19678063 | Msa0319760:intron | 35.0% | |
TAAAATGCGATTCAATCACG+GGG | + | chr2_4:19678161-19678180 | None:intergenic | 35.0% | |
ATGTCTTGGTGAGAGTTATT+TGG | + | chr2_4:19678243-19678262 | None:intergenic | 35.0% | |
! | TCAACTAATGGACAATGTCT+TGG | + | chr2_4:19678257-19678276 | None:intergenic | 35.0% |
AACCACAAACACTCAACTAA+TGG | + | chr2_4:19678269-19678288 | None:intergenic | 35.0% | |
! | AATCAGATTCTTTGCTGTCA+AGG | - | chr2_4:19678351-19678370 | Msa0319760:CDS | 35.0% |
AATGTGGCGAATTGATTGTA+GGG | - | chr2_4:19678528-19678547 | Msa0319760:five_prime_UTR | 35.0% | |
GATACTATGGACAATGGAGA+AGG | + | chr2_4:19670325-19670344 | None:intergenic | 40.0% | |
!! | GAGAGTTCTATTTCTGTTGG+AGG | + | chr2_4:19670402-19670421 | None:intergenic | 40.0% |
! | GTTTGTTAGGGTTTGGAAGA+AGG | + | chr2_4:19670430-19670449 | None:intergenic | 40.0% |
! | TTCTTCCTTCAATGGCGTTT+TGG | - | chr2_4:19670460-19670479 | Msa0319760:three_prime_UTR | 40.0% |
! | TTAATTACTATGCACCGACC+AGG | + | chr2_4:19671187-19671206 | None:intergenic | 40.0% |
CTTCTGATAGAAGACGTGTT+CGG | + | chr2_4:19671267-19671286 | None:intergenic | 40.0% | |
AGTGACAGTGCTACAACTTA+TGG | - | chr2_4:19671285-19671304 | Msa0319760:CDS | 40.0% | |
! | GCTACAACTTATGGACTGTT+TGG | - | chr2_4:19671294-19671313 | Msa0319760:intron | 40.0% |
ATAAACTCTAACGGTCCGTT+TGG | + | chr2_4:19671571-19671590 | None:intergenic | 40.0% | |
AAACGGACCGTTAGAGTTTA+TGG | - | chr2_4:19671570-19671589 | Msa0319760:intron | 40.0% | |
GCTGCTTCCATAAACTCTAA+CGG | + | chr2_4:19671580-19671599 | None:intergenic | 40.0% | |
CAACTGGATTCTCCAAAAAG+GGG | + | chr2_4:19671799-19671818 | None:intergenic | 40.0% | |
! | TTTTTATTCAGGTGCCTCCA+AGG | - | chr2_4:19671828-19671847 | Msa0319760:CDS | 40.0% |
! | TTTTATTCAGGTGCCTCCAA+GGG | - | chr2_4:19671829-19671848 | Msa0319760:CDS | 40.0% |
! | TTTGGGATTTCTTCCTGCTT+TGG | - | chr2_4:19671910-19671929 | Msa0319760:intron | 40.0% |
!! | GTAATATAACAGAGGCATCC+TGG | + | chr2_4:19672168-19672187 | None:intergenic | 40.0% |
TATCCCATCAGATATCTACC+CGG | - | chr2_4:19672197-19672216 | Msa0319760:CDS | 40.0% | |
TACCCGGTGAGATATATGAT+AGG | - | chr2_4:19672213-19672232 | Msa0319760:CDS | 40.0% | |
ATTTATGGCTTCTTGAGTGC+TGG | + | chr2_4:19672445-19672464 | None:intergenic | 40.0% | |
! | GCGAATTGAAAAAGTACGGA+AGG | - | chr2_4:19672592-19672611 | Msa0319760:intron | 40.0% |
! | TACGGAAGGCACAAAAAATG+TGG | - | chr2_4:19672606-19672625 | Msa0319760:intron | 40.0% |
! | ACGGAAGGCACAAAAAATGT+GGG | - | chr2_4:19672607-19672626 | Msa0319760:intron | 40.0% |
!! | CAAAGACTAGCTTCAAGCAA+AGG | - | chr2_4:19672630-19672649 | Msa0319760:intron | 40.0% |
GTAAGACCACTTCAATTCCA+TGG | - | chr2_4:19672712-19672731 | Msa0319760:intron | 40.0% | |
CTATGACCATGGAATTGAAG+TGG | + | chr2_4:19672721-19672740 | None:intergenic | 40.0% | |
TGCACAATTGTGAAACTTGG+GGG | + | chr2_4:19672794-19672813 | None:intergenic | 40.0% | |
! | CTCATTTTAAACTTGAGGGG+CGG | + | chr2_4:19672823-19672842 | None:intergenic | 40.0% |
TGCAAAAGGAGGCAAACTTA+AGG | + | chr2_4:19672857-19672876 | None:intergenic | 40.0% | |
AAACTTGAAAGAAGGGAAGG+GGG | + | chr2_4:19673126-19673145 | None:intergenic | 40.0% | |
CAAACTTGAAAGAAGGGAAG+GGG | + | chr2_4:19673127-19673146 | None:intergenic | 40.0% | |
CCAAACTTGAAAGAAGGGAA+GGG | + | chr2_4:19673128-19673147 | None:intergenic | 40.0% | |
TCCAAACTTGAAAGAAGGGA+AGG | + | chr2_4:19673129-19673148 | None:intergenic | 40.0% | |
TGGCTCCAAACTTGAAAGAA+GGG | + | chr2_4:19673133-19673152 | None:intergenic | 40.0% | |
TTGGCTCCAAACTTGAAAGA+AGG | + | chr2_4:19673134-19673153 | None:intergenic | 40.0% | |
ATATTAGCAGATAGGAGGCT+TGG | - | chr2_4:19673496-19673515 | Msa0319760:intron | 40.0% | |
! | GGTGCTATCTATGGAAGAAA+TGG | - | chr2_4:19673536-19673555 | Msa0319760:intron | 40.0% |
TTTCAACATTGGCGAACACA+TGG | - | chr2_4:19673706-19673725 | Msa0319760:intron | 40.0% | |
ATTTGTGAGTTGTGACATCC+TGG | - | chr2_4:19673930-19673949 | Msa0319760:intron | 40.0% | |
AGGATATCTTCACGTGATAC+TGG | - | chr2_4:19674067-19674086 | Msa0319760:intron | 40.0% | |
ACAATGGTAGATGCTTCTCT+AGG | - | chr2_4:19674094-19674113 | Msa0319760:intron | 40.0% | |
GAGTCAATTACTGGGATTGT+GGG | + | chr2_4:19674311-19674330 | None:intergenic | 40.0% | |
AGAGTCAATTACTGGGATTG+TGG | + | chr2_4:19674312-19674331 | None:intergenic | 40.0% | |
!! | ATGAAGCATTGATCTTCCAG+AGG | + | chr2_4:19674562-19674581 | None:intergenic | 40.0% |
GAAAAAACTGCTGCTAGCAT+AGG | + | chr2_4:19674669-19674688 | None:intergenic | 40.0% | |
!!! | ATGCTAGCAGCAGTTTTTTC+TGG | - | chr2_4:19674669-19674688 | Msa0319760:CDS | 40.0% |
!!! | GCAGCAGTTTTTTCTGGAAA+TGG | - | chr2_4:19674675-19674694 | Msa0319760:CDS | 40.0% |
ACCTTGTTGAGGTGATAACA+GGG | - | chr2_4:19675025-19675044 | Msa0319760:intron | 40.0% | |
! | AAAAGGGAGGGTGCAAAATA+AGG | + | chr2_4:19675056-19675075 | None:intergenic | 40.0% |
TCAATTGGACCTTTCTTACC+AGG | - | chr2_4:19675114-19675133 | Msa0319760:intron | 40.0% | |
TTCACCAAACCTGGTAAGAA+AGG | + | chr2_4:19675126-19675145 | None:intergenic | 40.0% | |
!!! | GTCATTTTTGTTGGATCACC+TGG | - | chr2_4:19675179-19675198 | Msa0319760:intron | 40.0% |
! | CATTTTTGTTGGATCACCTG+GGG | - | chr2_4:19675181-19675200 | Msa0319760:intron | 40.0% |
TGATGCAATTCACAGAAGAC+AGG | + | chr2_4:19675256-19675275 | None:intergenic | 40.0% | |
TCAGTGAGTGAGATAGTTTG+GGG | - | chr2_4:19675485-19675504 | Msa0319760:intron | 40.0% | |
ACTCATTGCATGGAACATCT+CGG | + | chr2_4:19675551-19675570 | None:intergenic | 40.0% | |
GCAAAAGACTACTCATTGCA+TGG | + | chr2_4:19675561-19675580 | None:intergenic | 40.0% | |
ATACCAGTTACACTAGAGCT+TGG | - | chr2_4:19675640-19675659 | Msa0319760:intron | 40.0% | |
TGTTTGTGAAGACGTAGATG+TGG | - | chr2_4:19675681-19675700 | Msa0319760:intron | 40.0% | |
!! | ATGGGGAAGGTATTCATACA+TGG | + | chr2_4:19675708-19675727 | None:intergenic | 40.0% |
CCTACATTCAGCAGATTAGT+GGG | + | chr2_4:19675765-19675784 | None:intergenic | 40.0% | |
ACCTACATTCAGCAGATTAG+TGG | + | chr2_4:19675766-19675785 | None:intergenic | 40.0% | |
CCAATGTAAAGTTAAGCTGG+TGG | + | chr2_4:19676061-19676080 | None:intergenic | 40.0% | |
CCACCAGCTTAACTTTACAT+TGG | - | chr2_4:19676058-19676077 | Msa0319760:intron | 40.0% | |
ATATCATACTTCCCAGCAAG+TGG | + | chr2_4:19676601-19676620 | None:intergenic | 40.0% | |
! | ACTTGCTGGGAAGTATGATA+TGG | - | chr2_4:19676600-19676619 | Msa0319760:intron | 40.0% |
! | CTTGCTGGGAAGTATGATAT+GGG | - | chr2_4:19676601-19676620 | Msa0319760:intron | 40.0% |
! | ATTGTTGCACGTGGAAGTTT+TGG | - | chr2_4:19676697-19676716 | Msa0319760:intron | 40.0% |
!!! | CGTGGAAGTTTTGGACATAT+AGG | - | chr2_4:19676706-19676725 | Msa0319760:intron | 40.0% |
ACATTCACAATCACAGTAGG+GGG | + | chr2_4:19676757-19676776 | None:intergenic | 40.0% | |
CACATTCACAATCACAGTAG+GGG | + | chr2_4:19676758-19676777 | None:intergenic | 40.0% | |
GTTGTTGGAGCATACAAGAT+AGG | + | chr2_4:19676902-19676921 | None:intergenic | 40.0% | |
!! | GAAGTTTAGCTCTGATGAAG+AGG | - | chr2_4:19676983-19677002 | Msa0319760:CDS | 40.0% |
TGCATCGAATTACATGTGTC+AGG | - | chr2_4:19677127-19677146 | Msa0319760:intron | 40.0% | |
CATCATATCACGCTACTACT+AGG | + | chr2_4:19677213-19677232 | None:intergenic | 40.0% | |
! | CCTATAGAACTAGCTTGAAC+CGG | - | chr2_4:19677345-19677364 | Msa0319760:intron | 40.0% |
! | TTTTTCCAGTCTCTGCCATT+TGG | - | chr2_4:19677528-19677547 | Msa0319760:intron | 40.0% |
!! | TTTTCCAGTCTCTGCCATTT+GGG | - | chr2_4:19677529-19677548 | Msa0319760:intron | 40.0% |
CAGTAGTTGAAGATAGATGG+TGG | - | chr2_4:19677622-19677641 | Msa0319760:intron | 40.0% | |
! | ATTTTCTGCCACAGGATACT+AGG | + | chr2_4:19677763-19677782 | None:intergenic | 40.0% |
TAGTATCCTGTGGCAGAAAA+TGG | - | chr2_4:19677762-19677781 | Msa0319760:intron | 40.0% | |
! | TCAAATCCATTTTCTGCCAC+AGG | + | chr2_4:19677771-19677790 | None:intergenic | 40.0% |
! | TCACTTGTTGAAGCGCTATA+TGG | - | chr2_4:19677801-19677820 | Msa0319760:intron | 40.0% |
! | CGCTATATGGTCTTAGCATA+TGG | - | chr2_4:19677814-19677833 | Msa0319760:intron | 40.0% |
CTCTACAGGTGGCAATAAAA+AGG | - | chr2_4:19677887-19677906 | Msa0319760:intron | 40.0% | |
! | TCATGTTAGGCTGGTTAATG+TGG | - | chr2_4:19677922-19677941 | Msa0319760:intron | 40.0% |
TTCAAATAATACGGGGCTTC+TGG | - | chr2_4:19677964-19677983 | Msa0319760:intron | 40.0% | |
TTAGTACGCTCCATGATTGA+CGG | - | chr2_4:19678183-19678202 | Msa0319760:intron | 40.0% | |
GTCCATTAGTTGAGTGTTTG+TGG | - | chr2_4:19678264-19678283 | Msa0319760:CDS | 40.0% | |
TCTTAGTAAATCCTGCTCAG+TGG | - | chr2_4:19678321-19678340 | Msa0319760:CDS | 40.0% | |
!! | ATGTGCTGATTGTGTGAATG+TGG | - | chr2_4:19678512-19678531 | Msa0319760:five_prime_UTR | 40.0% |
GAATGTGGCGAATTGATTGT+AGG | - | chr2_4:19678527-19678546 | Msa0319760:five_prime_UTR | 40.0% | |
! | TTCCTTCAATGGCGTTTTGG+TGG | - | chr2_4:19670463-19670482 | Msa0319760:three_prime_UTR | 45.0% |
AGCGAATGCAAGAACGAGAA+TGG | + | chr2_4:19670490-19670509 | None:intergenic | 45.0% | |
! | GAACTTTGGGAGGAATGAGA+AGG | + | chr2_4:19670536-19670555 | None:intergenic | 45.0% |
ACGTCGATCGAAGGAACTTT+GGG | + | chr2_4:19670549-19670568 | None:intergenic | 45.0% | |
AACGTCGATCGAAGGAACTT+TGG | + | chr2_4:19670550-19670569 | None:intergenic | 45.0% | |
GGAAGTTGGAAATCAATCGC+AGG | - | chr2_4:19670677-19670696 | Msa0319760:three_prime_UTR | 45.0% | |
TGTCTGTGTCGTGTCATGTA+TGG | + | chr2_4:19670929-19670948 | None:intergenic | 45.0% | |
TTTATTCAGGTGCCTCCAAG+GGG | - | chr2_4:19671830-19671849 | Msa0319760:CDS | 45.0% | |
! | CCAGCCACCATGAAGTATTT+GGG | - | chr2_4:19671893-19671912 | Msa0319760:intron | 45.0% |
ATAGGCTCACAAACCTCATC+CGG | + | chr2_4:19671938-19671957 | None:intergenic | 45.0% | |
GCAAGCGGCCATGAAATATT+TGG | - | chr2_4:19672014-19672033 | Msa0319760:intron | 45.0% | |
TCACCGGGTAGATATCTGAT+GGG | + | chr2_4:19672203-19672222 | None:intergenic | 45.0% | |
! | GAGTAGCTCGTGAGTTTGTT+TGG | - | chr2_4:19672393-19672412 | Msa0319760:intron | 45.0% |
GCACAATTGTGAAACTTGGG+GGG | + | chr2_4:19672793-19672812 | None:intergenic | 45.0% | |
! | GGACTAGTAAGTGCAAAAGG+AGG | + | chr2_4:19672868-19672887 | None:intergenic | 45.0% |
! | TGGGGACTAGTAAGTGCAAA+AGG | + | chr2_4:19672871-19672890 | None:intergenic | 45.0% |
TATCTCTGTGTTCGCCAATG+TGG | - | chr2_4:19672942-19672961 | Msa0319760:CDS | 45.0% | |
!! | CCCTTCCCTTCTTTCAAGTT+TGG | - | chr2_4:19673125-19673144 | Msa0319760:intron | 45.0% |
TACCAACTGAGCTAAGCTCA+CGG | + | chr2_4:19673293-19673312 | None:intergenic | 45.0% | |
! | TGAGCTTAGCTCAGTTGGTA+GGG | - | chr2_4:19673293-19673312 | Msa0319760:intron | 45.0% |
! | ATATGCATGGGGGACTAGTA+AGG | - | chr2_4:19673776-19673795 | Msa0319760:intron | 45.0% |
! | TATGCATGGGGGACTAGTAA+GGG | - | chr2_4:19673777-19673796 | Msa0319760:intron | 45.0% |
! | GGGGACTAGTAAGGGTAAAA+GGG | - | chr2_4:19673785-19673804 | Msa0319760:intron | 45.0% |
! | GGGACTAGTAAGGGTAAAAG+GGG | - | chr2_4:19673786-19673805 | Msa0319760:intron | 45.0% |
CTAAAAACTGCATGTTCGCC+AGG | + | chr2_4:19673951-19673970 | None:intergenic | 45.0% | |
AATTACTGGGATTGTGGGAG+GGG | + | chr2_4:19674306-19674325 | None:intergenic | 45.0% | |
CAATTACTGGGATTGTGGGA+GGG | + | chr2_4:19674307-19674326 | None:intergenic | 45.0% | |
TCAATTACTGGGATTGTGGG+AGG | + | chr2_4:19674308-19674327 | None:intergenic | 45.0% | |
!! | TCAGAACATGCAAGTTGGTC+TGG | - | chr2_4:19674946-19674965 | Msa0319760:intron | 45.0% |
! | GGTCTGGATGCTTTTACTTC+CGG | - | chr2_4:19674962-19674981 | Msa0319760:intron | 45.0% |
GACCTTGTTGAGGTGATAAC+AGG | - | chr2_4:19675024-19675043 | Msa0319760:intron | 45.0% | |
ACCCTGTTATCACCTCAACA+AGG | + | chr2_4:19675029-19675048 | None:intergenic | 45.0% | |
TGGACCTTTCTTACCAGGTT+TGG | - | chr2_4:19675119-19675138 | Msa0319760:intron | 45.0% | |
!! | CTTACCAGGTTTGGTGAAAC+AGG | - | chr2_4:19675128-19675147 | Msa0319760:intron | 45.0% |
TTCTCCTGTTTCACCAAACC+TGG | + | chr2_4:19675135-19675154 | None:intergenic | 45.0% | |
CAATTCACAGAAGACAGGAC+AGG | + | chr2_4:19675251-19675270 | None:intergenic | 45.0% | |
! | CAACGAATGCATAATGGGGA+AGG | + | chr2_4:19675721-19675740 | None:intergenic | 45.0% |
CCCACTAATCTGCTGAATGT+AGG | - | chr2_4:19675762-19675781 | Msa0319760:intron | 45.0% | |
AGGTTGCTCAAATTGCTGTC+AGG | - | chr2_4:19675782-19675801 | Msa0319760:intron | 45.0% | |
GGTTGCTCAAATTGCTGTCA+GGG | - | chr2_4:19675783-19675802 | Msa0319760:intron | 45.0% | |
! | ACAAGAAGCCCATGTTGACT+TGG | + | chr2_4:19675992-19676011 | None:intergenic | 45.0% |
! | TTTCAGGTGACACGCAAACA+TGG | + | chr2_4:19677186-19677205 | None:intergenic | 45.0% |
ATGTTTGCGTGTCACCTGAA+AGG | - | chr2_4:19677185-19677204 | Msa0319760:intron | 45.0% | |
TGTTTGCGTGTCACCTGAAA+GGG | - | chr2_4:19677186-19677205 | Msa0319760:intron | 45.0% | |
!! | CCGGTTCAAGCTAGTTCTAT+AGG | + | chr2_4:19677348-19677367 | None:intergenic | 45.0% |
GCTTGAACCGGATAGAATCA+TGG | - | chr2_4:19677357-19677376 | Msa0319760:intron | 45.0% | |
! | AGGTACACGCAGGTTGAATT+AGG | + | chr2_4:19677473-19677492 | None:intergenic | 45.0% |
! | TTTCCAGTCTCTGCCATTTG+GGG | - | chr2_4:19677530-19677549 | Msa0319760:intron | 45.0% |
! | GGCGTAAAACACAGTGGATT+TGG | - | chr2_4:19677552-19677571 | Msa0319760:intron | 45.0% |
! | CACAGTGGATTTGGACGATT+CGG | - | chr2_4:19677561-19677580 | Msa0319760:intron | 45.0% |
AGACAGACCTGAATAGGCTT+TGG | + | chr2_4:19677669-19677688 | None:intergenic | 45.0% | |
TCATCTGTCCTAGTATCCTG+TGG | - | chr2_4:19677752-19677771 | Msa0319760:intron | 45.0% | |
ATGGGATCGTTTGCAAGCAT+TGG | - | chr2_4:19677833-19677852 | Msa0319760:intron | 45.0% | |
CTTACTGAGCAGAACTCTAC+AGG | - | chr2_4:19677873-19677892 | Msa0319760:intron | 45.0% | |
TAGTTAGCACAGGTAGCAGT+TGG | + | chr2_4:19677997-19678016 | None:intergenic | 45.0% | |
TAGTACGCTCCATGATTGAC+GGG | - | chr2_4:19678184-19678203 | Msa0319760:intron | 45.0% | |
! | ATTGACGGGTCGCTTATCAT+AGG | - | chr2_4:19678198-19678217 | Msa0319760:intron | 45.0% |
ATAGGCTCACTGTGAGATGT+TGG | - | chr2_4:19678216-19678235 | Msa0319760:intron | 45.0% | |
!! | GATTTGCTAAACCACTGAGC+AGG | + | chr2_4:19678335-19678354 | None:intergenic | 45.0% |
TGTCAAGGTTTCGCTGCATT+CGG | - | chr2_4:19678366-19678385 | Msa0319760:exon | 45.0% | |
CAAGGTCGTTGGATCTAGAT+CGG | + | chr2_4:19678491-19678510 | None:intergenic | 45.0% | |
TCACACAATCAGCACATCCA+AGG | + | chr2_4:19678509-19678528 | None:intergenic | 45.0% | |
!!! | ATTTTTTTCAATTTTTTTAA+GGG | + | chr2_4:19670970-19670989 | None:intergenic | 5.0% |
!!! | TATTTTTTTCAATTTTTTTA+AGG | + | chr2_4:19670971-19670990 | None:intergenic | 5.0% |
!! | AAACATTAAATAAATAAAAA+AGG | + | chr2_4:19672288-19672307 | None:intergenic | 5.0% |
GACCACCAAAACGCCATTGA+AGG | + | chr2_4:19670468-19670487 | None:intergenic | 50.0% | |
TGGGAGGAATGAGAAGGAGA+AGG | + | chr2_4:19670530-19670549 | None:intergenic | 50.0% | |
TCGATCGAAGGAACTTTGGG+AGG | + | chr2_4:19670546-19670565 | None:intergenic | 50.0% | |
! | GAAGCATCAACGTCGATCGA+AGG | + | chr2_4:19670558-19670577 | None:intergenic | 50.0% |
ATCGACGTTGATGCTTCCGA+TGG | - | chr2_4:19670561-19670580 | Msa0319760:three_prime_UTR | 50.0% | |
CTCTAACGGTCCGTTTGGAT+TGG | + | chr2_4:19671566-19671585 | None:intergenic | 50.0% | |
ACTAACGCTAAGGCCCTGTT+TGG | + | chr2_4:19671761-19671780 | None:intergenic | 50.0% | |
AAACAGGGCCTTAGCGTTAG+TGG | - | chr2_4:19671760-19671779 | Msa0319760:CDS | 50.0% | |
! | GCCAGCCACCATGAAGTATT+TGG | - | chr2_4:19671892-19671911 | Msa0319760:intron | 50.0% |
CCCAAATACTTCATGGTGGC+TGG | + | chr2_4:19671896-19671915 | None:intergenic | 50.0% | |
ATTTCTTCCTGCTTTGGCGC+CGG | - | chr2_4:19671916-19671935 | Msa0319760:intron | 50.0% | |
CTCACCGGGTAGATATCTGA+TGG | + | chr2_4:19672204-19672223 | None:intergenic | 50.0% | |
ACCAACTGAGCTAAGCTCAC+GGG | + | chr2_4:19673292-19673311 | None:intergenic | 50.0% | |
GTGAGCTTAGCTCAGTTGGT+AGG | - | chr2_4:19673292-19673311 | Msa0319760:intron | 50.0% | |
! | TAGCAGATAGGAGGCTTGGT+TGG | - | chr2_4:19673500-19673519 | Msa0319760:intron | 50.0% |
CGTGGCTAATTGTCATGACG+TGG | + | chr2_4:19673737-19673756 | None:intergenic | 50.0% | |
! | GGGGGACTAGTAAGGGTAAA+AGG | - | chr2_4:19673784-19673803 | Msa0319760:intron | 50.0% |
TGAGACAGGTACCTGTACTC+AGG | + | chr2_4:19674184-19674203 | None:intergenic | 50.0% | |
ATTACTGGGATTGTGGGAGG+GGG | + | chr2_4:19674305-19674324 | None:intergenic | 50.0% | |
GCTTCATAAGAGAGCCAGAG+TGG | - | chr2_4:19674575-19674594 | Msa0319760:intron | 50.0% | |
AAGGGGGTGAAATTCCACTC+TGG | + | chr2_4:19674592-19674611 | None:intergenic | 50.0% | |
AGAGTGGAATTTCACCCCCT+TGG | - | chr2_4:19674591-19674610 | Msa0319760:intron | 50.0% | |
TTTCACCCCCTTGGCGTTAT+TGG | - | chr2_4:19674600-19674619 | Msa0319760:intron | 50.0% | |
TTCACCCCCTTGGCGTTATT+GGG | - | chr2_4:19674601-19674620 | Msa0319760:intron | 50.0% | |
AATGGCCCCAATAACGCCAA+GGG | + | chr2_4:19674610-19674629 | None:intergenic | 50.0% | |
TTATTGGGGCCATTGTGTCG+TGG | - | chr2_4:19674616-19674635 | Msa0319760:intron | 50.0% | |
GGGATAGTTCCACGACACAA+TGG | + | chr2_4:19674628-19674647 | None:intergenic | 50.0% | |
CAAGGGCTGATTGGATGATC+CGG | + | chr2_4:19674984-19675003 | None:intergenic | 50.0% | |
ATCACCTCAACAAGGTCCTC+TGG | + | chr2_4:19675021-19675040 | None:intergenic | 50.0% | |
! | TGGTGAAACAGGAGAAGCAC+TGG | - | chr2_4:19675139-19675158 | Msa0319760:intron | 50.0% |
!! | AGAAGCACTGGTGTCTTCTG+TGG | - | chr2_4:19675151-19675170 | Msa0319760:intron | 50.0% |
! | CCACCAAGCTCTAGTGTAAC+TGG | + | chr2_4:19675646-19675665 | None:intergenic | 50.0% |
CCAGTTACACTAGAGCTTGG+TGG | - | chr2_4:19675643-19675662 | Msa0319760:intron | 50.0% | |
TCAGGGCTGTTCTTCAGTCA+GGG | - | chr2_4:19675800-19675819 | Msa0319760:intron | 50.0% | |
CATACTTCCCAGCAAGTGGT+GGG | + | chr2_4:19676597-19676616 | None:intergenic | 50.0% | |
TCATACTTCCCAGCAAGTGG+TGG | + | chr2_4:19676598-19676617 | None:intergenic | 50.0% | |
GGAGCTGAAATTGTTGCACG+TGG | - | chr2_4:19676688-19676707 | Msa0319760:intron | 50.0% | |
!!! | CTCAGCTGTGCTGTTTTCTC+AGG | - | chr2_4:19677038-19677057 | Msa0319760:intron | 50.0% |
GCTACTACTAGGTCCCTTTC+AGG | + | chr2_4:19677202-19677221 | None:intergenic | 50.0% | |
! | TTCCAGTCTCTGCCATTTGG+GGG | - | chr2_4:19677531-19677550 | Msa0319760:intron | 50.0% |
! | CTGTGTTTTACGCCCCCAAA+TGG | + | chr2_4:19677546-19677565 | None:intergenic | 50.0% |
! | TTTGGGGGCGTAAAACACAG+TGG | - | chr2_4:19677546-19677565 | Msa0319760:intron | 50.0% |
! | AGTGGATTTGGACGATTCGG+TGG | - | chr2_4:19677564-19677583 | Msa0319760:intron | 50.0% |
ACTGAGCAGAACTCTACAGG+TGG | - | chr2_4:19677876-19677895 | Msa0319760:intron | 50.0% | |
! | AGGCTGGTTAATGTGGCAAC+TGG | - | chr2_4:19677929-19677948 | Msa0319760:intron | 50.0% |
GATAAGCGACCCGTCAATCA+TGG | + | chr2_4:19678196-19678215 | None:intergenic | 50.0% | |
GATCTTTGATCCAACGACCG+CGG | + | chr2_4:19678396-19678415 | None:intergenic | 50.0% | |
GCGGTCGTTGGATCAAAGAT+CGG | - | chr2_4:19678395-19678414 | Msa0319760:five_prime_UTR | 50.0% | |
CGTTGGATCAAAGATCGGTC+CGG | - | chr2_4:19678400-19678419 | Msa0319760:five_prime_UTR | 50.0% | |
GGACGGTCCAATTTCAAGCT+TGG | + | chr2_4:19678470-19678489 | None:intergenic | 50.0% | |
GTCGTTGGATCTAGATCGGA+CGG | + | chr2_4:19678487-19678506 | None:intergenic | 50.0% | |
CGATCTAGATCCAACGACCT+TGG | - | chr2_4:19678489-19678508 | Msa0319760:five_prime_UTR | 50.0% | |
ATCAGCACATCCAAGGTCGT+TGG | + | chr2_4:19678502-19678521 | None:intergenic | 50.0% | |
CAACTGAGCTAAGCTCACGG+GGG | + | chr2_4:19673290-19673309 | None:intergenic | 55.0% | |
CCAACTGAGCTAAGCTCACG+GGG | + | chr2_4:19673291-19673310 | None:intergenic | 55.0% | |
! | CAGATAGGAGGCTTGGTTGG+AGG | - | chr2_4:19673503-19673522 | Msa0319760:intron | 55.0% |
! | ATAGGAGGCTTGGTTGGAGG+TGG | - | chr2_4:19673506-19673525 | Msa0319760:intron | 55.0% |
! | TAGGAGGCTTGGTTGGAGGT+GGG | - | chr2_4:19673507-19673526 | Msa0319760:intron | 55.0% |
TCACCCCCTTGGCGTTATTG+GGG | - | chr2_4:19674602-19674621 | Msa0319760:intron | 55.0% | |
ATGGCCCCAATAACGCCAAG+GGG | + | chr2_4:19674609-19674628 | None:intergenic | 55.0% | |
CAATGGCCCCAATAACGCCA+AGG | + | chr2_4:19674611-19674630 | None:intergenic | 55.0% | |
CTATGGCAGCAAGGGCTGAT+TGG | + | chr2_4:19674993-19675012 | None:intergenic | 55.0% | |
CAATCAGCCCTTGCTGCCAT+AGG | - | chr2_4:19674991-19675010 | Msa0319760:intron | 55.0% | |
TGGAGCTCCTATGGCAGCAA+GGG | + | chr2_4:19675001-19675020 | None:intergenic | 55.0% | |
!! | AAGGTCCTCTGGAGCTCCTA+TGG | + | chr2_4:19675010-19675029 | None:intergenic | 55.0% |
AGCTCCAGAGGACCTTGTTG+AGG | - | chr2_4:19675014-19675033 | Msa0319760:intron | 55.0% | |
GGCGTCGCTGTTTAGACTAG+AGG | + | chr2_4:19675453-19675472 | None:intergenic | 55.0% | |
GTCAGGGCTGTTCTTCAGTC+AGG | - | chr2_4:19675799-19675818 | Msa0319760:intron | 55.0% | |
CAGGGCTGTTCTTCAGTCAG+GGG | - | chr2_4:19675801-19675820 | Msa0319760:intron | 55.0% | |
AGGGCTGTTCTTCAGTCAGG+GGG | - | chr2_4:19675802-19675821 | Msa0319760:intron | 55.0% | |
!! | GGACGATTCGGTGGTGTTGA+AGG | - | chr2_4:19677573-19677592 | Msa0319760:intron | 55.0% |
TCAGGTGCCTCCAAGGGGAA+CGG | - | chr2_4:19671835-19671854 | Msa0319760:CDS | 60.0% | |
AAGGGGAACGGCGCAGCAAT+CGG | - | chr2_4:19671847-19671866 | Msa0319760:CDS | 60.0% | |
CCCCGTGAGCTTAGCTCAGT+TGG | - | chr2_4:19673288-19673307 | Msa0319760:intron | 60.0% | |
GCTTGGTTGGAGGTGGGACT+GGG | - | chr2_4:19673513-19673532 | Msa0319760:intron | 60.0% | |
CTTGGTTGGAGGTGGGACTG+GGG | - | chr2_4:19673514-19673533 | Msa0319760:intron | 60.0% | |
TTGGTTGGAGGTGGGACTGG+GGG | - | chr2_4:19673515-19673534 | Msa0319760:intron | 60.0% | |
!! | GGGACTGGGGGTGCTATCTA+TGG | - | chr2_4:19673527-19673546 | Msa0319760:intron | 60.0% |
TGGCCCCAATAACGCCAAGG+GGG | + | chr2_4:19674608-19674627 | None:intergenic | 60.0% | |
CTGGAGCTCCTATGGCAGCA+AGG | + | chr2_4:19675002-19675021 | None:intergenic | 60.0% | |
TGCTGCCATAGGAGCTCCAG+AGG | - | chr2_4:19675002-19675021 | Msa0319760:intron | 60.0% | |
GGGCTGTTCTTCAGTCAGGG+GGG | - | chr2_4:19675803-19675822 | Msa0319760:intron | 60.0% | |
TCGCTGCATTCGGTCATCCG+CGG | - | chr2_4:19678376-19678395 | Msa0319760:five_prime_UTR | 60.0% | |
ATTCGGTCATCCGCGGTCGT+TGG | - | chr2_4:19678383-19678402 | Msa0319760:five_prime_UTR | 60.0% | |
GATTGCTGCGCCGTTCCCCT+TGG | + | chr2_4:19671848-19671867 | None:intergenic | 65.0% | |
AGGGGAACGGCGCAGCAATC+GGG | - | chr2_4:19671848-19671867 | Msa0319760:CDS | 65.0% | |
! | TCCTGCTTTGGCGCCGGATG+AGG | - | chr2_4:19671922-19671941 | Msa0319760:intron | 65.0% |
ACCTCATCCGGCGCCAAAGC+AGG | + | chr2_4:19671926-19671945 | None:intergenic | 65.0% | |
! | GGCTTGGTTGGAGGTGGGAC+TGG | - | chr2_4:19673512-19673531 | Msa0319760:intron | 65.0% |
TCAGGGGGGCAGAACTGTGC+TGG | - | chr2_4:19675817-19675836 | Msa0319760:intron | 65.0% | |
TTGCAGGGCCCACCACTTGC+TGG | - | chr2_4:19676586-19676605 | Msa0319760:intron | 65.0% | |
TGCAGGGCCCACCACTTGCT+GGG | - | chr2_4:19676587-19676606 | Msa0319760:intron | 65.0% | |
CGCCCCCAAATGGCAGAGAC+TGG | + | chr2_4:19677536-19677555 | None:intergenic | 65.0% | |
TGCTGCGCCGTTCCCCTTGG+AGG | + | chr2_4:19671845-19671864 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 19670205 | 19678636 | 19670205 | ID=Msa0319760;Name=Msa0319760 |
chr2_4 | mRNA | 19670205 | 19678636 | 19670205 | ID=Msa0319760-mRNA-1;Parent=Msa0319760;Name=Msa0319760-mRNA-1;_AED=0.06;_eAED=0.06;_QI=266|0.92|0.92|1|1|1|14|719|584 |
chr2_4 | exon | 19670205 | 19671076 | 19670205 | ID=Msa0319760-mRNA-1:exon:7263;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19671161 | 19671304 | 19671161 | ID=Msa0319760-mRNA-1:exon:7262;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19671693 | 19671884 | 19671693 | ID=Msa0319760-mRNA-1:exon:7261;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19672034 | 19672249 | 19672034 | ID=Msa0319760-mRNA-1:exon:7260;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19672920 | 19673057 | 19672920 | ID=Msa0319760-mRNA-1:exon:7259;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19673133 | 19673228 | 19673133 | ID=Msa0319760-mRNA-1:exon:7258;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19673627 | 19673705 | 19673627 | ID=Msa0319760-mRNA-1:exon:7257;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19673795 | 19673898 | 19673795 | ID=Msa0319760-mRNA-1:exon:7256;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19674131 | 19674284 | 19674131 | ID=Msa0319760-mRNA-1:exon:7255;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19674650 | 19674772 | 19674650 | ID=Msa0319760-mRNA-1:exon:7254;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19676163 | 19676257 | 19676163 | ID=Msa0319760-mRNA-1:exon:7253;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19676898 | 19677002 | 19676898 | ID=Msa0319760-mRNA-1:exon:7252;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19678125 | 19678168 | 19678125 | ID=Msa0319760-mRNA-1:exon:7251;Parent=Msa0319760-mRNA-1 |
chr2_4 | exon | 19678259 | 19678636 | 19678259 | ID=Msa0319760-mRNA-1:exon:7250;Parent=Msa0319760-mRNA-1 |
chr2_4 | five_prime_UTR | 19678371 | 19678636 | 19678371 | ID=Msa0319760-mRNA-1:five_prime_utr;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19678259 | 19678370 | 19678259 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19678125 | 19678168 | 19678125 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19676898 | 19677002 | 19676898 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19676163 | 19676257 | 19676163 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19674650 | 19674772 | 19674650 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19674131 | 19674284 | 19674131 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19673795 | 19673898 | 19673795 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19673627 | 19673705 | 19673627 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19673133 | 19673228 | 19673133 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19672920 | 19673057 | 19672920 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19672034 | 19672249 | 19672034 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19671693 | 19671884 | 19671693 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19671161 | 19671304 | 19671161 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | CDS | 19670924 | 19671076 | 19670924 | ID=Msa0319760-mRNA-1:cds;Parent=Msa0319760-mRNA-1 |
chr2_4 | three_prime_UTR | 19670205 | 19670923 | 19670205 | ID=Msa0319760-mRNA-1:three_prime_utr;Parent=Msa0319760-mRNA-1 |
Gene Sequence |
Protein sequence |