AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0319990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0319990 MtrunA17_Chr2g0294821 95.492 244 11 0 89 332 5 248 1.68e-174 483
Msa0319990 MtrunA17_Chr4g0068061 60.163 246 66 5 1 236 1 224 2.83e-92 278
Msa0319990 MtrunA17_Chr1g0194951 42.229 341 147 10 1 311 1 321 4.89e-69 220
Msa0319990 MtrunA17_Chr7g0269831 84.874 119 18 0 1 119 1 119 3.98e-65 209
Msa0319990 MtrunA17_Chr7g0275911 68.103 116 37 0 1 116 1 116 1.09e-59 192
Msa0319990 MtrunA17_Chr2g0294811 94.565 92 5 0 1 92 1 92 3.14e-59 186
Msa0319990 MtrunA17_Chr8g0346561 69.828 116 35 0 1 116 1 116 6.35e-59 191
Msa0319990 MtrunA17_Chr1g0167661 54.190 179 69 4 1 179 1 166 6.50e-59 190
Msa0319990 MtrunA17_Chr4g0070611 71.552 116 33 0 1 116 1 116 6.73e-59 192
Msa0319990 MtrunA17_Chr4g0070641 71.552 116 33 0 1 116 1 116 1.67e-58 186
Msa0319990 MtrunA17_Chr1g0187761 70.690 116 34 0 1 116 1 116 8.63e-58 187
Msa0319990 MtrunA17_Chr4g0039971 69.828 116 35 0 1 116 2 117 9.57e-58 190
Msa0319990 MtrunA17_Chr8g0349261 66.942 121 38 2 1 119 1 121 1.40e-57 188
Msa0319990 MtrunA17_Chr3g0121241 70.536 112 33 0 5 116 35 146 1.44e-57 188
Msa0319990 MtrunA17_Chr1g0203411 51.111 180 80 3 1 175 1 177 2.08e-57 187
Msa0319990 MtrunA17_Chr3g0131121 56.962 158 56 2 1 146 1 158 3.68e-57 187
Msa0319990 MtrunA17_Chr4g0037141 61.972 142 51 2 1 141 1 140 4.24e-57 186
Msa0319990 MtrunA17_Chr7g0217741 69.828 116 35 0 1 116 1 116 5.92e-57 187
Msa0319990 MtrunA17_Chr3g0115821 60.741 135 53 0 1 135 1 135 8.02e-57 187
Msa0319990 MtrunA17_Chr4g0042671 70.690 116 34 0 1 116 1 116 9.97e-57 189
Msa0319990 MtrunA17_Chr6g0453471 68.966 116 36 0 1 116 1 116 2.03e-56 187
Msa0319990 MtrunA17_Chr1g0167691 68.966 116 36 0 1 116 1 116 2.78e-56 183
Msa0319990 MtrunA17_Chr4g0048511 60.284 141 55 1 1 140 1 141 6.31e-56 186
Msa0319990 MtrunA17_Chr3g0110351 69.828 116 35 0 1 116 1 116 8.10e-56 184
Msa0319990 MtrunA17_Chr2g0281071 69.231 117 35 1 1 116 1 117 1.81e-55 184
Msa0319990 MtrunA17_Chr4g0060721 58.741 143 56 1 1 143 2 141 2.21e-55 183
Msa0319990 MtrunA17_Chr7g0261281 66.379 116 39 0 1 116 1 116 2.55e-55 181
Msa0319990 MtrunA17_Chr7g0274581 64.655 116 41 0 1 116 1 116 3.47e-55 179
Msa0319990 MtrunA17_Chr5g0434571 68.966 116 36 0 1 116 37 152 3.92e-55 183
Msa0319990 MtrunA17_Chr8g0385321 68.376 117 37 0 1 117 1 117 6.83e-55 181
Msa0319990 MtrunA17_Chr2g0323411 68.103 116 37 0 1 116 1 116 1.12e-54 181
Msa0319990 MtrunA17_Chr7g0254411 61.111 126 49 0 1 126 1 126 4.58e-54 180
Msa0319990 MtrunA17_Chr5g0410961 50.000 176 75 2 1 163 1 176 1.07e-53 179
Msa0319990 MtrunA17_Chr7g0228891 55.769 156 61 4 1 152 1 152 3.15e-53 176
Msa0319990 MtrunA17_Chr3g0092401 63.793 116 42 0 1 116 2 117 1.16e-52 176
Msa0319990 MtrunA17_Chr5g0395281 64.655 116 41 0 1 116 1 116 4.37e-52 174
Msa0319990 MtrunA17_Chr4g0057031 65.517 116 40 0 1 116 1 116 6.97e-52 172
Msa0319990 MtrunA17_Chr5g0435101 64.035 114 41 0 3 116 2 115 4.41e-51 168
Msa0319990 MtrunA17_Chr3g0103281 62.931 116 43 0 1 116 1 116 1.05e-50 171
Msa0319990 MtrunA17_Chr7g0217221 62.069 116 44 0 1 116 1 116 2.06e-50 169
Msa0319990 MtrunA17_Chr1g0193801 46.500 200 98 3 1 197 1 194 3.92e-48 166
Msa0319990 MtrunA17_Chr8g0387421 61.207 116 45 0 1 116 1 116 4.36e-48 164
Msa0319990 MtrunA17_Chr1g0193371 63.793 116 42 0 1 116 1 116 5.93e-48 165
Msa0319990 MtrunA17_Chr4g0044421 62.609 115 42 1 3 116 2 116 1.91e-47 158
Msa0319990 MtrunA17_Chr4g0058631 46.354 192 84 3 1 186 1 179 3.34e-47 163
Msa0319990 MtrunA17_Chr2g0330041 59.483 116 47 0 1 116 1 116 3.51e-47 164
Msa0319990 MtrunA17_Chr7g0270891 62.931 116 43 0 1 116 1 116 4.30e-47 162
Msa0319990 MtrunA17_Chr4g0022931 58.974 117 47 1 1 116 1 117 5.49e-47 160
Msa0319990 MtrunA17_Chr2g0311221 63.636 110 40 0 2 111 4 113 6.41e-47 161
Msa0319990 MtrunA17_Chr4g0022891 62.832 113 42 0 1 113 1 113 7.75e-47 158
Msa0319990 MtrunA17_Chr8g0342541 60.169 118 47 0 1 118 1 118 8.65e-47 161
Msa0319990 MtrunA17_Chr7g0264641 53.333 135 62 1 1 134 1 135 8.88e-47 159
Msa0319990 MtrunA17_Chr2g0323351 61.207 116 45 0 1 116 1 116 1.54e-46 158
Msa0319990 MtrunA17_Chr6g0452271 57.759 116 49 0 1 116 1 116 1.63e-46 160
Msa0319990 MtrunA17_Chr5g0400821 59.829 117 46 1 1 116 1 117 1.74e-46 159
Msa0319990 MtrunA17_Chr6g0453211 60.360 111 44 0 1 111 1 111 2.20e-46 159
Msa0319990 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 2.88e-46 160
Msa0319990 MtrunA17_Chr1g0151941 58.120 117 48 1 1 116 1 117 5.97e-46 156
Msa0319990 MtrunA17_Chr4g0028311 58.974 117 47 1 1 116 1 117 1.13e-45 158
Msa0319990 MtrunA17_Chr4g0022911 56.897 116 49 1 1 115 1 116 1.22e-45 157
Msa0319990 MtrunA17_Chr4g0022901 58.621 116 47 1 1 115 1 116 1.31e-45 156
Msa0319990 MtrunA17_Chr3g0117091 61.207 116 45 0 1 116 1 116 4.06e-45 157
Msa0319990 MtrunA17_Chr8g0342521 60.345 116 46 0 1 116 1 116 4.80e-45 157
Msa0319990 MtrunA17_Chr1g0152011 58.974 117 47 1 1 116 1 117 5.65e-45 156
Msa0319990 MtrunA17_Chr3g0135311 57.627 118 49 1 1 117 1 118 8.20e-45 156
Msa0319990 MtrunA17_Chr7g0271241 65.138 109 38 0 1 109 1 109 8.66e-45 157
Msa0319990 MtrunA17_Chr1g0211161 61.404 114 44 0 3 116 4 117 1.49e-44 152
Msa0319990 MtrunA17_Chr2g0327351 61.261 111 42 1 1 110 1 111 2.69e-44 154
Msa0319990 MtrunA17_Chr4g0032401 49.068 161 74 3 12 166 17 175 6.69e-44 153
Msa0319990 MtrunA17_Chr2g0309911 58.559 111 46 0 6 116 5 115 8.16e-44 152
Msa0319990 MtrunA17_Chr4g0022881 57.627 118 50 0 1 118 1 118 1.52e-43 149
Msa0319990 MtrunA17_Chr2g0328771 40.404 198 109 2 12 204 20 213 2.06e-43 152
Msa0319990 MtrunA17_Chr7g0228231 63.810 105 38 0 12 116 14 118 2.17e-43 148
Msa0319990 MtrunA17_Chr6g0450101 58.475 118 47 1 1 116 1 118 3.15e-43 148
Msa0319990 MtrunA17_Chr1g0168661 55.200 125 46 1 13 137 22 136 6.08e-43 149
Msa0319990 MtrunA17_Chr4g0054391 60.909 110 42 1 1 109 1 110 9.14e-43 149
Msa0319990 MtrunA17_Chr4g0072751 59.459 111 44 1 1 110 1 111 1.95e-42 150
Msa0319990 MtrunA17_Chr1g0209661 58.333 108 45 0 8 115 23 130 4.02e-42 148
Msa0319990 MtrunA17_Chr3g0088461 60.185 108 43 0 9 116 19 126 4.38e-42 149
Msa0319990 MtrunA17_Chr8g0342481 55.833 120 52 1 1 119 1 120 5.65e-42 150
Msa0319990 MtrunA17_Chr8g0354661 60.377 106 42 0 10 115 35 140 6.71e-42 152
Msa0319990 MtrunA17_Chr6g0487491 54.032 124 48 2 1 115 1 124 2.21e-41 145
Msa0319990 MtrunA17_Chr4g0055981 48.667 150 68 3 9 156 52 194 2.51e-41 144
Msa0319990 MtrunA17_Chr1g0186061 62.136 103 39 0 13 115 21 123 2.57e-41 144
Msa0319990 MtrunA17_Chr1g0203441 58.120 117 48 1 1 116 1 117 1.32e-40 143
Msa0319990 MtrunA17_Chr8g0343831 60.194 103 41 0 14 116 10 112 3.12e-40 142
Msa0319990 MtrunA17_Chr3g0080861 57.009 107 46 0 10 116 35 141 4.09e-40 147
Msa0319990 MtrunA17_Chr1g0194291 61.538 104 40 0 9 112 18 121 4.33e-40 141
Msa0319990 MtrunA17_Chr6g0470971 58.036 112 47 0 4 115 6 117 5.34e-40 142
Msa0319990 MtrunA17_Chr4g0042611 69.318 88 27 0 1 88 1 88 1.40e-39 134
Msa0319990 MtrunA17_Chr7g0240821 42.857 175 90 2 17 191 6 170 1.74e-39 139
Msa0319990 MtrunA17_Chr5g0417821 57.944 107 45 0 10 116 5 111 1.91e-39 140
Msa0319990 MtrunA17_Chr2g0322521 58.879 107 44 0 9 115 26 132 3.01e-39 142
Msa0319990 MtrunA17_Chr5g0434911 53.636 110 51 0 7 116 16 125 3.91e-39 139
Msa0319990 MtrunA17_Chr5g0434931 54.717 106 48 0 11 116 34 139 8.62e-39 139
Msa0319990 MtrunA17_Chr5g0434831 56.604 106 46 0 11 116 6 111 1.09e-38 135
Msa0319990 MtrunA17_Chr7g0220341 52.500 120 55 1 10 127 23 142 1.53e-38 138
Msa0319990 MtrunA17_Chr3g0099131 57.547 106 45 0 10 115 39 144 5.66e-38 142
Msa0319990 MtrunA17_Chr7g0228991 53.774 106 49 0 11 116 28 133 1.66e-36 132
Msa0319990 MtrunA17_Chr2g0327821 53.846 104 48 0 12 115 6 109 3.92e-36 130
Msa0319990 MtrunA17_Chr1g0194301 53.509 114 50 1 12 122 33 146 4.59e-36 131
Msa0319990 MtrunA17_Chr1g0192411 52.778 108 51 0 8 115 8 115 8.85e-36 134
Msa0319990 MtrunA17_Chr5g0434841 52.830 106 50 0 11 116 19 124 2.50e-35 130
Msa0319990 MtrunA17_Chr7g0247131 68.493 73 23 0 44 116 10 82 3.25e-35 129
Msa0319990 MtrunA17_Chr8g0360111 53.922 102 47 0 11 112 24 125 5.79e-35 128
Msa0319990 MtrunA17_Chr1g0154031 53.846 104 48 0 12 115 76 179 1.10e-34 130
Msa0319990 MtrunA17_Chr2g0293911 56.075 107 47 0 8 114 20 126 2.08e-34 128
Msa0319990 MtrunA17_Chr4g0068921 56.075 107 47 0 8 114 20 126 2.91e-34 124
Msa0319990 MtrunA17_Chr1g0180391 54.286 105 48 0 12 116 19 123 4.77e-34 125
Msa0319990 MtrunA17_Chr4g0030881 51.818 110 46 1 13 115 8 117 4.84e-34 125
Msa0319990 MtrunA17_Chr5g0395221 60.227 88 35 0 1 88 1 88 1.10e-31 114
Msa0319990 MtrunA17_Chr2g0323321 60.870 92 35 1 1 92 1 91 2.34e-31 114
Msa0319990 MtrunA17_Chr5g0440781 39.437 142 80 2 13 153 13 149 1.29e-29 112
Msa0319990 MtrunA17_Chr8g0342511 56.322 87 38 0 1 87 1 87 3.50e-29 107
Msa0319990 MtrunA17_Chr5g0440761 48.544 103 52 1 13 114 13 115 7.06e-29 112
Msa0319990 MtrunA17_Chr5g0441141 48.544 103 52 1 13 114 13 115 7.17e-29 112
Msa0319990 MtrunA17_Chr5g0441131 37.267 161 87 3 10 161 7 162 9.41e-29 109
Msa0319990 MtrunA17_Chr8g0342531 45.082 122 62 1 1 117 1 122 2.30e-28 108
Msa0319990 MtrunA17_Chr4g0053431 37.714 175 98 4 14 183 5 173 6.31e-28 109
Msa0319990 MtrunA17_Chr3g0133601 49.524 105 52 1 14 118 37 140 1.60e-27 107
Msa0319990 MtrunA17_Chr4g0013361 31.076 251 153 7 8 246 6 248 1.98e-27 108
Msa0319990 MtrunA17_Chr3g0099141 54.023 87 40 0 8 94 36 122 2.37e-27 104
Msa0319990 MtrunA17_Chr5g0401731 45.217 115 62 1 14 128 15 128 4.63e-27 108
Msa0319990 MtrunA17_Chr4g0008551 52.427 103 46 2 14 115 38 138 4.82e-27 108
Msa0319990 MtrunA17_Chr8g0334881 46.154 104 55 1 12 114 10 113 5.30e-27 108
Msa0319990 MtrunA17_Chr8g0342461 53.333 90 41 1 1 89 1 90 1.22e-26 102
Msa0319990 MtrunA17_Chr8g0342471 53.333 90 41 1 1 89 1 90 1.77e-26 102
Msa0319990 MtrunA17_Chr5g0429661 50.000 104 51 1 12 115 120 222 6.69e-26 105
Msa0319990 MtrunA17_Chr7g0229131 43.137 102 58 0 44 145 4 105 4.22e-25 99.4
Msa0319990 MtrunA17_Chr7g0229101 61.429 70 27 0 44 113 4 73 1.00e-24 99.8
Msa0319990 MtrunA17_Chr6g0454921 46.078 102 54 1 14 115 15 115 1.79e-24 99.0
Msa0319990 MtrunA17_Chr5g0437321 47.475 99 51 1 14 112 19 116 1.25e-23 98.6
Msa0319990 MtrunA17_Chr4g0058991 42.593 108 61 1 8 115 203 309 1.95e-23 100
Msa0319990 MtrunA17_Chr3g0117511 41.667 108 62 1 8 115 177 283 4.39e-23 99.4
Msa0319990 MtrunA17_Chr5g0434901 57.576 66 28 0 48 113 9 74 3.11e-22 90.1
Msa0319990 MtrunA17_Chr7g0238631 39.831 118 70 1 12 129 111 227 4.76e-21 94.0
Msa0319990 MtrunA17_Chr3g0093811 52.055 73 35 0 44 116 14 86 6.60e-21 90.5
Msa0319990 MtrunA17_Chr6g0480581 40.187 107 60 2 14 117 4 109 1.53e-20 89.0
Msa0319990 MtrunA17_Chr5g0425591 47.059 85 44 1 10 93 7 91 7.91e-20 82.8
Msa0319990 MtrunA17_Chr3g0139671 36.937 111 69 1 12 122 83 192 9.42e-20 90.5
Msa0319990 MtrunA17_Chr6g0453751 46.739 92 40 2 11 93 19 110 1.95e-19 83.2
Msa0319990 MtrunA17_Chr6g0460661 37.273 110 68 1 14 123 16 124 1.95e-19 84.0
Msa0319990 MtrunA17_Chr7g0228531 39.623 106 62 2 10 115 216 319 3.40e-19 87.8
Msa0319990 MtrunA17_Chr4g0042501 40.196 102 60 1 14 115 105 205 3.99e-19 87.8
Msa0319990 MtrunA17_Chr1g0157731 35.135 111 71 1 12 122 89 198 6.72e-19 87.8
Msa0319990 MtrunA17_Chr5g0417621 39.216 102 61 1 14 115 134 234 1.11e-18 86.3
Msa0319990 MtrunA17_Chr7g0238651 34.167 120 77 1 14 131 7 126 2.67e-18 84.7
Msa0319990 MtrunA17_Chr5g0397841 42.857 98 55 1 12 109 108 204 8.23e-18 84.0
Msa0319990 MtrunA17_Chr7g0233061 38.679 106 50 3 14 113 180 276 1.12e-17 82.8
Msa0319990 MtrunA17_Chr6g0460671 30.065 153 105 2 14 165 99 250 3.93e-17 81.3
Msa0319990 MtrunA17_Chr7g0228481 38.462 104 62 2 10 113 216 317 6.65e-17 81.3
Msa0319990 MtrunA17_Chr3g0125801 40.196 102 60 1 14 115 16 116 1.13e-16 79.0
Msa0319990 MtrunA17_Chr5g0416341 37.374 99 61 1 17 115 29 126 4.33e-16 79.0
Msa0319990 MtrunA17_Chr1g0177901 50.000 66 33 0 48 113 27 92 7.31e-16 75.5
Msa0319990 MtrunA17_Chr7g0228401 50.000 66 33 0 48 113 312 377 1.59e-15 77.4
Msa0319990 MtrunA17_Chr7g0247141 68.750 48 14 1 1 47 1 48 1.82e-15 70.1
Msa0319990 MtrunA17_Chr7g0254261 37.255 102 63 1 14 115 89 189 2.35e-15 75.9
Msa0319990 MtrunA17_Chr5g0434871 58.140 43 18 0 74 116 2 44 5.53e-15 68.9
Msa0319990 MtrunA17_Chr8g0362231 36.364 99 61 2 17 114 25 122 5.11e-14 72.4
Msa0319990 MtrunA17_Chr1g0193901 50.000 58 28 1 12 68 11 68 5.77e-13 64.7
Msa0319990 MtrunA17_Chr1g0193891 50.000 58 28 1 12 68 11 68 5.77e-13 64.7
Msa0319990 MtrunA17_Chr1g0193871 50.000 58 28 1 12 68 11 68 5.77e-13 64.7
Msa0319990 MtrunA17_Chr1g0193881 50.000 58 28 1 12 68 11 68 5.77e-13 64.7
Msa0319990 MtrunA17_Chr5g0434891 42.857 63 36 0 77 139 1 63 6.79e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0319990 AT5G49330.1 42.458 358 155 11 1 326 1 339 5.38e-73 229
Msa0319990 AT3G62610.1 43.131 313 145 7 1 308 1 285 8.58e-70 221
Msa0319990 AT2G47460.1 61.988 171 39 2 1 169 1 147 7.35e-69 219
Msa0319990 AT1G06180.1 69.231 117 36 0 1 117 1 117 6.83e-59 190
Msa0319990 AT4G09460.1 65.152 132 40 1 1 126 1 132 5.13e-58 187
Msa0319990 AT3G61250.1 67.241 116 38 0 1 116 1 116 6.99e-58 189
Msa0319990 AT4G38620.1 58.025 162 56 2 1 150 1 162 8.02e-58 188
Msa0319990 AT1G35515.1 70.690 116 34 0 1 116 1 116 8.30e-58 186
Msa0319990 AT2G31180.1 49.730 185 86 3 1 185 1 178 1.98e-57 186
Msa0319990 AT1G22640.1 48.619 181 83 2 1 181 1 171 6.40e-57 185
Msa0319990 AT2G16720.1 58.904 146 50 2 1 146 1 136 8.35e-57 185
Msa0319990 AT5G15310.4 68.103 116 37 0 1 116 1 116 1.03e-56 184
Msa0319990 AT4G21440.1 57.432 148 63 0 1 148 1 148 1.06e-56 187
Msa0319990 AT3G02940.2 67.241 116 38 0 1 116 1 116 1.22e-56 186
Msa0319990 AT5G15310.1 68.103 116 37 0 1 116 1 116 1.33e-56 187
Msa0319990 AT5G15310.2 68.103 116 37 0 1 116 1 116 1.91e-56 186
Msa0319990 AT4G28110.1 67.241 116 38 0 1 116 1 116 2.15e-56 185
Msa0319990 AT3G02940.1 67.241 116 38 0 1 116 1 116 2.28e-56 186
Msa0319990 AT3G02940.3 67.241 116 38 0 1 116 1 116 2.28e-56 186
Msa0319990 AT3G01140.2 68.103 116 37 0 1 116 1 116 2.59e-56 186
Msa0319990 AT5G16770.4 68.103 116 37 0 1 116 1 116 4.43e-56 185
Msa0319990 AT5G16770.3 68.103 116 37 0 1 116 1 116 4.43e-56 185
Msa0319990 AT5G16770.1 68.103 116 37 0 1 116 1 116 7.36e-56 185
Msa0319990 AT5G16770.2 68.103 116 37 0 1 116 1 116 7.36e-56 185
Msa0319990 AT3G23250.1 65.517 116 40 0 1 116 1 116 8.67e-56 183
Msa0319990 AT4G34990.1 59.722 144 52 1 1 138 1 144 1.77e-55 182
Msa0319990 AT1G08810.1 50.847 177 81 3 1 174 1 174 2.61e-55 182
Msa0319990 AT3G13540.1 51.445 173 71 3 4 176 15 174 2.98e-55 181
Msa0319990 AT5G16600.1 69.828 116 35 0 1 116 1 116 1.14e-54 182
Msa0319990 AT1G66230.1 48.187 193 86 5 1 183 1 189 1.44e-54 180
Msa0319990 AT4G05100.1 67.521 117 37 1 1 116 1 117 4.10e-54 180
Msa0319990 AT1G34670.1 66.379 116 39 0 1 116 1 116 5.42e-54 181
Msa0319990 AT5G62470.2 62.698 126 43 1 1 126 1 122 3.02e-53 179
Msa0319990 AT3G01140.1 67.257 113 37 0 4 116 47 159 4.58e-53 179
Msa0319990 AT5G65230.1 66.379 116 39 0 1 116 1 116 1.25e-52 176
Msa0319990 AT5G07690.1 68.421 114 36 0 1 114 1 114 1.41e-52 176
Msa0319990 AT5G10280.1 63.793 116 42 0 1 116 1 116 1.83e-52 176
Msa0319990 AT4G17785.2 67.521 117 37 1 1 116 1 117 2.31e-52 176
Msa0319990 AT4G17785.1 67.521 117 37 1 1 116 1 117 3.07e-52 176
Msa0319990 AT5G61420.2 65.517 116 40 0 1 116 1 116 5.55e-52 176
Msa0319990 AT3G47600.1 62.931 116 43 0 1 116 1 116 5.93e-52 175
Msa0319990 AT4G12350.1 65.517 116 40 0 1 116 1 116 7.39e-52 173
Msa0319990 AT5G62470.1 62.698 126 42 2 1 126 1 121 7.65e-52 175
Msa0319990 AT1G74650.1 63.793 116 42 0 1 116 1 116 9.87e-52 174
Msa0319990 AT4G22680.1 57.241 145 53 2 1 139 1 142 1.23e-51 172
Msa0319990 AT5G60890.1 54.730 148 62 2 1 147 1 144 1.56e-51 172
Msa0319990 AT1G16490.1 64.348 115 41 0 2 116 4 118 1.58e-51 172
Msa0319990 AT5G56110.1 53.741 147 67 1 1 146 1 147 2.89e-51 172
Msa0319990 AT1G79180.1 52.632 152 68 1 2 153 4 151 7.72e-51 171
Msa0319990 AT3G28910.1 63.793 116 42 0 1 116 1 116 1.13e-50 171
Msa0319990 AT1G56160.1 63.478 115 42 0 2 116 4 118 1.29e-49 167
Msa0319990 AT5G07700.1 63.793 116 42 0 1 116 1 116 1.90e-49 168
Msa0319990 AT5G07700.2 63.793 116 42 0 1 116 1 116 1.90e-49 168
Msa0319990 AT5G14340.1 63.793 116 42 0 1 116 13 128 2.84e-49 166
Msa0319990 AT1G09540.1 65.517 116 40 0 1 116 1 116 2.01e-48 166
Msa0319990 AT1G18570.1 62.393 117 43 1 1 116 1 117 2.84e-48 166
Msa0319990 AT3G13890.2 59.483 116 47 0 1 116 1 116 8.42e-48 165
Msa0319990 AT5G26660.1 63.793 116 42 0 1 116 1 116 9.12e-48 164
Msa0319990 AT1G63910.1 62.069 116 44 0 1 116 1 116 1.14e-47 164
Msa0319990 AT1G74080.1 62.281 114 43 0 1 114 1 114 1.29e-47 163
Msa0319990 AT5G54230.1 46.067 178 96 0 1 178 1 178 1.39e-47 163
Msa0319990 AT4G01680.3 64.655 116 41 0 1 116 1 116 1.82e-47 160
Msa0319990 AT4G01680.1 64.655 116 41 0 1 116 1 116 4.31e-47 162
Msa0319990 AT5G23000.1 60.684 117 45 1 1 116 1 117 7.63e-47 161
Msa0319990 AT5G40330.1 52.206 136 58 1 13 141 13 148 1.01e-46 157
Msa0319990 AT2G36890.1 56.154 130 51 2 1 129 1 125 1.03e-46 160
Msa0319990 AT2G36890.2 56.154 130 51 2 1 129 42 166 1.52e-46 161
Msa0319990 AT1G57560.1 62.931 116 43 0 1 116 1 116 1.62e-46 160
Msa0319990 AT1G57560.2 62.931 116 43 0 1 116 1 116 2.10e-46 159
Msa0319990 AT5G14750.1 44.624 186 90 2 13 185 17 202 3.97e-46 155
Msa0319990 AT5G35550.1 67.619 105 34 0 12 116 14 118 8.02e-46 157
Msa0319990 AT3G12820.1 59.649 114 46 0 3 116 5 118 2.11e-45 155
Msa0319990 AT5G62320.1 58.197 122 44 1 2 116 3 124 2.75e-45 155
Msa0319990 AT5G65790.1 58.974 117 47 1 1 116 1 117 3.26e-45 158
Msa0319990 AT5G57620.1 56.000 125 54 1 1 124 1 125 4.01e-45 157
Msa0319990 AT4G37780.1 56.410 117 50 1 1 116 1 117 4.19e-45 156
Msa0319990 AT3G49690.1 58.974 117 47 1 1 116 1 117 5.56e-45 156
Msa0319990 AT1G74430.1 59.483 116 47 0 1 116 1 116 8.18e-45 154
Msa0319990 AT3G13890.1 55.200 125 47 1 1 116 1 125 9.17e-45 157
Msa0319990 AT3G24310.1 64.762 105 37 0 11 115 17 121 1.84e-44 153
Msa0319990 AT1G79180.2 43.243 185 68 2 2 153 4 184 6.43e-44 154
Msa0319990 AT4G01680.2 58.594 128 41 1 1 116 1 128 1.15e-43 154
Msa0319990 AT4G13480.1 65.049 103 36 0 13 115 7 109 1.57e-43 150
Msa0319990 AT2G32460.1 60.000 110 44 0 6 115 12 121 1.99e-43 156
Msa0319990 AT2G32460.2 61.905 105 40 0 11 115 5 109 2.78e-43 155
Msa0319990 AT3G27920.1 51.145 131 57 1 13 136 15 145 3.11e-43 149
Msa0319990 AT5G12870.1 60.952 105 41 0 12 116 18 122 3.88e-43 150
Msa0319990 AT3G12720.1 57.143 112 48 0 6 117 16 127 5.06e-43 150
Msa0319990 AT3G28470.1 58.182 110 46 0 1 110 1 110 5.57e-43 151
Msa0319990 AT3G08500.1 61.111 108 42 0 9 116 27 134 6.43e-43 151
Msa0319990 AT3G27810.1 62.857 105 39 0 12 116 20 124 1.60e-42 147
Msa0319990 AT1G18710.1 56.897 116 50 0 1 116 1 116 1.79e-42 148
Msa0319990 AT5G40350.1 62.857 105 39 0 12 116 17 121 3.04e-42 146
Msa0319990 AT3G01530.1 42.105 171 99 0 8 178 21 191 5.68e-42 145
Msa0319990 AT5G52600.1 57.692 104 44 0 12 115 12 115 2.92e-41 143
Msa0319990 AT3G30210.1 60.577 104 41 0 11 114 26 129 6.30e-41 144
Msa0319990 AT1G25340.1 58.252 103 43 0 13 115 19 121 2.03e-40 143
Msa0319990 AT1G68320.1 58.654 104 43 0 12 115 19 122 2.65e-40 143
Msa0319990 AT5G06100.1 58.095 105 44 0 11 115 31 135 2.82e-40 147
Msa0319990 AT5G55020.1 58.879 107 44 0 10 116 24 130 3.22e-40 148
Msa0319990 AT3G11440.2 58.654 104 43 0 12 115 41 144 7.91e-40 146
Msa0319990 AT5G06100.5 58.095 105 44 0 11 115 31 135 1.03e-39 146
Msa0319990 AT5G06100.2 58.095 105 44 0 11 115 31 135 1.03e-39 146
Msa0319990 AT5G06100.3 58.095 105 44 0 11 115 31 135 1.03e-39 146
Msa0319990 AT5G06100.4 58.095 105 44 0 11 115 31 135 1.03e-39 146
Msa0319990 AT3G11440.3 58.654 104 43 0 12 115 41 144 3.25e-39 145
Msa0319990 AT3G11440.4 58.654 104 43 0 12 115 41 144 3.25e-39 145
Msa0319990 AT3G11440.1 58.654 104 43 0 12 115 41 144 3.25e-39 145
Msa0319990 AT4G26930.1 56.190 105 46 0 10 114 17 121 7.33e-39 142
Msa0319990 AT1G48000.1 58.095 105 44 0 10 114 30 134 7.77e-38 135
Msa0319990 AT1G66370.1 53.043 115 50 1 1 115 1 111 9.05e-38 135
Msa0319990 AT2G47190.1 53.704 108 50 0 8 115 16 123 1.40e-37 135
Msa0319990 AT3G46130.1 55.238 105 47 0 11 115 8 112 8.03e-37 133
Msa0319990 AT5G59780.3 55.340 103 46 0 13 115 9 111 8.85e-37 132
Msa0319990 AT4G25560.1 60.194 103 41 0 13 115 11 113 2.11e-36 132
Msa0319990 AT1G25340.2 55.340 103 41 1 13 115 19 116 3.99e-36 132
Msa0319990 AT1G25340.3 55.340 103 41 1 13 115 19 116 7.45e-36 132
Msa0319990 AT3G06490.1 59.813 107 43 0 8 114 15 121 1.22e-35 132
Msa0319990 AT2G26960.1 51.887 106 51 0 9 114 17 122 3.58e-35 132
Msa0319990 AT1G66380.1 58.095 105 44 0 11 115 7 111 1.29e-34 124
Msa0319990 AT5G52260.1 58.252 103 43 0 13 115 13 115 6.34e-34 125
Msa0319990 AT1G56650.1 57.143 105 45 0 11 115 7 111 6.98e-34 125
Msa0319990 AT1G66390.1 58.095 105 44 0 11 115 7 111 9.69e-34 125
Msa0319990 AT3G48920.1 51.923 104 50 0 13 116 19 122 1.10e-33 125
Msa0319990 AT3G53200.1 56.731 104 45 0 12 115 9 112 1.12e-32 122
Msa0319990 AT5G49620.1 56.075 107 47 0 8 114 22 128 1.60e-32 123
Msa0319990 AT2G26950.1 48.113 106 55 0 9 114 13 118 2.08e-31 122
Msa0319990 AT5G14750.3 62.821 78 26 1 39 116 12 86 2.36e-31 116
Msa0319990 AT5G35550.2 72.222 72 20 0 45 116 50 121 5.24e-31 118
Msa0319990 AT5G26660.2 70.270 74 22 0 43 116 12 85 8.75e-31 119
Msa0319990 AT3G27810.2 68.056 72 23 0 45 116 4 75 4.87e-30 113
Msa0319990 AT3G47600.2 66.667 72 24 0 45 116 39 110 1.70e-29 115
Msa0319990 AT5G40350.2 66.667 72 24 0 45 116 5 76 4.29e-29 110
Msa0319990 AT5G49620.2 49.587 121 47 1 8 114 22 142 6.53e-29 114
Msa0319990 AT3G60460.1 45.872 109 58 1 7 114 6 114 4.71e-28 111
Msa0319990 AT5G59780.2 63.014 73 27 0 43 115 18 90 8.78e-28 108
Msa0319990 AT3G12820.2 64.286 70 25 0 47 116 1 70 1.17e-27 107
Msa0319990 AT3G46130.3 63.889 72 26 0 44 115 9 80 1.42e-27 108
Msa0319990 AT3G46130.4 63.014 73 27 0 43 115 18 90 2.37e-27 107
Msa0319990 AT3G09230.1 45.946 111 59 1 14 124 55 164 8.07e-27 109
Msa0319990 AT3G53200.2 64.384 73 26 0 43 115 7 79 1.20e-26 105
Msa0319990 AT2G39880.1 53.398 103 45 2 14 115 50 150 1.22e-25 105
Msa0319990 AT3G55730.1 50.485 103 48 2 14 115 56 156 4.18e-25 104
Msa0319990 AT4G18770.1 37.500 144 84 3 8 149 211 350 5.29e-25 104
Msa0319990 AT5G58850.1 47.115 104 54 1 12 115 103 205 8.79e-25 104
Msa0319990 AT3G27785.1 44.037 109 60 1 7 115 182 289 1.86e-23 100
Msa0319990 AT1G22640.3 47.368 95 40 2 58 152 1 85 4.15e-23 95.5
Msa0319990 AT4G37260.1 46.078 102 54 1 14 115 13 113 4.96e-23 97.8
Msa0319990 AT5G11050.1 45.098 102 55 1 14 115 105 205 5.50e-23 99.0
Msa0319990 AT2G23290.1 45.098 102 55 1 14 115 13 113 2.08e-22 95.9
Msa0319990 AT3G50060.1 47.059 102 53 1 14 115 6 106 2.67e-22 95.5
Msa0319990 AT5G40360.1 40.777 103 60 1 12 114 156 257 3.29e-22 96.3
Msa0319990 AT5G02320.1 35.897 156 90 3 12 161 125 276 3.35e-22 97.8
Msa0319990 AT5G02320.2 35.897 156 90 3 12 161 125 276 3.35e-22 97.8
Msa0319990 AT5G02320.3 35.897 156 90 3 12 161 65 216 3.76e-22 97.4
Msa0319990 AT1G66380.3 59.722 72 29 0 44 115 7 78 1.18e-21 88.6
Msa0319990 AT1G18960.1 41.509 106 53 3 14 116 10 109 1.33e-21 93.6
Msa0319990 AT5G67300.1 46.078 102 54 1 14 115 6 106 2.26e-21 92.8
Msa0319990 AT5G14750.4 59.322 59 24 0 58 116 1 59 2.81e-21 88.6
Msa0319990 AT5G14750.2 59.322 59 24 0 58 116 1 59 2.81e-21 88.6
Msa0319990 AT3G23250.2 59.322 59 24 0 58 116 1 59 4.98e-21 90.5
Msa0319990 AT5G11510.3 39.130 115 61 2 12 122 79 188 5.98e-21 94.4
Msa0319990 AT5G11510.1 39.130 115 61 2 12 122 79 188 5.98e-21 94.4
Msa0319990 AT5G11510.4 39.130 115 61 2 12 122 79 188 5.98e-21 94.4
Msa0319990 AT5G11510.2 39.130 115 61 2 12 122 79 188 7.93e-21 94.0
Msa0319990 AT1G17950.1 42.157 102 58 1 14 115 5 105 8.17e-21 90.5
Msa0319990 AT5G11510.5 39.130 115 61 2 12 122 79 188 8.91e-21 93.6
Msa0319990 AT1G66380.2 52.381 84 40 0 11 94 7 90 1.08e-20 86.3
Msa0319990 AT1G71030.2 57.576 66 28 0 51 116 5 70 2.62e-20 87.4
Msa0319990 AT1G71030.1 57.576 66 28 0 51 116 19 84 3.32e-20 87.4
Msa0319990 AT3G09370.1 38.462 117 71 1 12 128 128 243 5.50e-20 90.9
Msa0319990 AT3G09370.2 38.462 117 71 1 12 128 133 248 5.58e-20 90.9
Msa0319990 AT3G09370.3 38.462 117 71 1 12 128 141 256 6.75e-20 90.9
Msa0319990 AT5G17800.1 34.783 138 84 2 14 146 93 229 7.68e-20 89.0
Msa0319990 AT1G69560.1 37.963 108 66 1 9 116 102 208 1.20e-19 88.6
Msa0319990 AT1G69560.2 37.963 108 66 1 9 116 118 224 1.30e-19 88.6
Msa0319990 AT2G25230.1 39.815 108 64 1 7 114 19 125 4.64e-19 85.1
Msa0319990 AT4G33450.1 37.168 113 65 2 3 115 13 119 1.09e-18 84.3
Msa0319990 AT1G26780.2 39.423 104 62 1 12 115 96 198 2.66e-18 85.1
Msa0319990 AT1G73410.1 42.157 102 58 1 14 115 6 106 2.94e-18 83.2
Msa0319990 AT4G32730.1 35.135 111 71 1 12 122 85 194 3.49e-18 85.9
Msa0319990 AT4G32730.5 35.135 111 71 1 12 122 85 194 3.75e-18 85.9
Msa0319990 AT4G32730.4 35.135 111 71 1 12 122 85 194 3.75e-18 85.9
Msa0319990 AT4G32730.3 35.135 111 71 1 12 122 85 194 3.75e-18 85.9
Msa0319990 AT4G32730.2 35.135 111 71 1 12 122 85 194 3.75e-18 85.9
Msa0319990 AT1G73410.2 42.157 102 58 1 14 115 6 106 4.25e-18 81.6
Msa0319990 AT1G26780.1 39.423 104 62 1 12 115 96 198 4.86e-18 83.2
Msa0319990 AT3G29020.1 36.893 103 64 1 14 116 65 166 2.14e-16 77.8
Msa0319990 AT3G29020.2 36.893 103 64 1 14 116 67 168 2.21e-16 79.0
Msa0319990 AT2G37630.1 35.052 97 61 1 14 108 4 100 2.43e-16 79.3
Msa0319990 AT4G00540.2 37.500 112 66 2 11 119 100 210 4.65e-16 79.0
Msa0319990 AT5G39700.1 37.255 102 63 1 15 116 57 157 7.47e-16 75.1
Msa0319990 AT4G00540.1 37.500 112 66 2 11 119 98 208 8.34e-16 78.2
Msa0319990 AT1G14350.2 37.374 99 61 1 17 115 28 125 1.75e-15 77.4
Msa0319990 AT1G14350.1 37.374 99 61 1 17 115 28 125 1.75e-15 77.4
Msa0319990 AT5G40430.1 33.898 118 76 1 7 124 47 162 1.76e-15 75.5
Msa0319990 AT2G02820.3 36.364 99 62 1 17 115 33 130 3.21e-15 75.9
Msa0319990 AT2G02820.1 36.364 99 62 1 17 115 33 130 4.32e-15 76.3
Msa0319990 AT2G02820.2 36.364 99 62 1 17 115 33 130 4.65e-15 76.3
Msa0319990 AT5G59780.1 63.043 46 17 0 70 115 1 46 5.32e-15 72.4
Msa0319990 AT4G25560.2 67.391 46 15 0 70 115 2 47 1.64e-14 72.0
Msa0319990 AT3G46130.2 63.043 46 17 0 70 115 1 46 1.75e-14 71.2
Msa0319990 AT1G74650.3 60.465 43 17 0 77 119 1 43 6.01e-13 68.2
Msa0319990 AT3G28910.2 67.500 40 13 0 77 116 1 40 6.24e-13 68.2
Msa0319990 AT5G61420.1 72.222 36 10 0 81 116 2 37 3.42e-12 66.6

Find 71 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATACTAAATGGCTTATTT+TGG 0.180094 2_4:-20115777 None:intergenic
AATTAATTACCTGCTTTCTT+AGG 0.225779 2_4:-20115923 None:intergenic
TTTCCCTTGATTAATTGTTT+TGG 0.234384 2_4:-20119367 None:intergenic
TTCCCATTGGCTATACTAAA+TGG 0.254512 2_4:-20115787 None:intergenic
GGGTGGTGGAGACTCGTTTA+TGG 0.268230 2_4:-20119325 None:intergenic
GTCAAGTTGCATGCTGTTCT+TGG 0.300226 2_4:+20116181 Msa0319990:CDS
ACTGATTACATCAAACAAAA+TGG 0.313926 2_4:+20115878 Msa0319990:CDS
TCATCATCTAGCCATTTATA+TGG 0.328544 2_4:-20119609 None:intergenic
CTATTGTCTTCTTCTATGCT+TGG 0.334263 2_4:-20119399 None:intergenic
AACAAAATGGTGAAGGATCT+TGG 0.342359 2_4:+20115891 Msa0319990:CDS
AAAGATGCATGTGGAGATAA+TGG 0.348455 2_4:+20119734 Msa0319990:CDS
TGCTTGTGGGGTCCAGGCAT+TGG 0.350603 2_4:+20119909 Msa0319990:CDS
ATTGAATATTGATGAGGGTT+TGG 0.371754 2_4:+20119584 Msa0319990:CDS
GGAGATAATGGAAACAAATA+AGG 0.374313 2_4:+20119746 Msa0319990:CDS
TTGAATATTGATGAGGGTTT+GGG 0.380724 2_4:+20119585 Msa0319990:CDS
ATTTGTGGCTCATCATATAA+TGG 0.388625 2_4:+20119783 Msa0319990:CDS
CCCACAAGCAAGCCTTCATT+TGG 0.400951 2_4:-20119896 None:intergenic
ATAATGAGATAAAGAACTAT+TGG 0.401279 2_4:+20119262 Msa0319990:CDS
TTTCTTTAGGTATTGGTTCA+AGG 0.411865 2_4:-20119443 None:intergenic
ATTATGATCAATTGTGTGAT+TGG 0.419140 2_4:+20119856 Msa0319990:CDS
AGGGTTTGGGACCATATAAA+TGG 0.422279 2_4:+20119598 Msa0319990:CDS
AATGCATGAGAATGATGATA+AGG 0.433723 2_4:+20119689 Msa0319990:CDS
TGCATGCTGTTCTTGGAAAT+AGG 0.449023 2_4:+20116188 Msa0319990:CDS
CCAAATGAAGGCTTGCTTGT+GGG 0.450234 2_4:+20119896 Msa0319990:CDS
AATGAATTGAATATTGATGA+GGG 0.462618 2_4:+20119579 Msa0319990:CDS
TTCTTTAGGTATTGGTTCAA+GGG 0.466185 2_4:-20119442 None:intergenic
ACATCCAAAACAATTAATCA+AGG 0.469809 2_4:+20119363 Msa0319990:CDS
AAGGCTTGCTTGTGGGGTCC+AGG 0.474360 2_4:+20119903 Msa0319990:CDS
TGGATGTAGATGCGATATCA+AGG 0.476913 2_4:-20119347 None:intergenic
GAATAATATTTATGAAATGA+AGG 0.480192 2_4:+20119518 Msa0319990:CDS
ATCTCATTATCTGTTCGTCC+TGG 0.494018 2_4:-20119249 None:intergenic
ATGCATGAGAATGATGATAA+GGG 0.499487 2_4:+20119690 Msa0319990:CDS
TTCATGATTTCACCAATGCC+TGG 0.500438 2_4:-20119921 None:intergenic
GGCATTGGTGAAATCATGAA+TGG 0.500573 2_4:+20119924 Msa0319990:CDS
TGATATATGAAGGTTTGTTA+AGG 0.500643 2_4:+20116068 Msa0319990:intron
TTATGATCAATTGTGTGATT+GGG 0.501403 2_4:+20119857 Msa0319990:CDS
TATAATGGAGAGAGTGGAGA+AGG 0.506418 2_4:+20119798 Msa0319990:CDS
TTGTCAAGAAGACCAAATGA+AGG 0.509240 2_4:+20119884 Msa0319990:CDS
CAAATGAAGGCTTGCTTGTG+GGG 0.513197 2_4:+20119897 Msa0319990:CDS
CAATGATTTCTTCCTCATGA+GGG 0.513229 2_4:-20116159 None:intergenic
ACAATGATTTCTTCCTCATG+AGG 0.520735 2_4:-20116160 None:intergenic
GGAAGAGTTGTAGACTAAGA+TGG 0.521666 2_4:+20116095 Msa0319990:CDS
ATGAAGGTTTGTTAAGGTGT+GGG 0.523398 2_4:+20116074 Msa0319990:intron
TATGAAGGTTTGTTAAGGTG+TGG 0.532696 2_4:+20116073 Msa0319990:intron
CAACAAGGAGCTCTTCCCAT+TGG 0.535780 2_4:-20115800 None:intergenic
TTGGGTTGAAGAAAGGAAGA+TGG 0.541827 2_4:+20115831 Msa0319990:CDS
AAATGAATTGAATATTGATG+AGG 0.544069 2_4:+20119578 Msa0319990:CDS
AGCCATTTAGTATAGCCAAT+GGG 0.551510 2_4:+20115785 Msa0319990:exon
AATAATATTTATGAAATGAA+GGG 0.558223 2_4:+20119519 Msa0319990:CDS
ATTGGAACTCTCATTTGAGA+AGG 0.563317 2_4:+20119280 Msa0319990:CDS
TACATCAAACAAAATGGTGA+AGG 0.566927 2_4:+20115884 Msa0319990:CDS
AGGAAGATGGACTGCTGAAG+AGG 0.567938 2_4:+20115844 Msa0319990:CDS
AAGCCATTTAGTATAGCCAA+TGG 0.571497 2_4:+20115784 Msa0319990:exon
GGATGTAGATGCGATATCAA+GGG 0.576863 2_4:-20119346 None:intergenic
GATGCGATATCAAGGGGTGG+TGG 0.592249 2_4:-20119339 None:intergenic
CATCCAAAACAATTAATCAA+GGG 0.603337 2_4:+20119364 Msa0319990:CDS
ACCAAATGAAGGCTTGCTTG+TGG 0.604293 2_4:+20119895 Msa0319990:CDS
GAAATGAAAAGTGAAATTTG+TGG 0.604467 2_4:+20119768 Msa0319990:CDS
GTGATAGCATCACATTTACC+AGG 0.608146 2_4:+20119231 Msa0319990:CDS
TCACAATACTATAATGTACA+AGG 0.616095 2_4:+20119474 Msa0319990:CDS
TCATCATATAATGGAGAGAG+TGG 0.620420 2_4:+20119792 Msa0319990:CDS
AATGATTTCTTCCTCATGAG+GGG 0.620652 2_4:-20116158 None:intergenic
TTGAGAGCAGATGTGAAGAG+AGG 0.626478 2_4:+20116127 Msa0319990:CDS
CATAGAAGAAGACAATAGCA+TGG 0.634357 2_4:+20119404 Msa0319990:CDS
AAAATGGTGAAGGATCTTGG+AGG 0.644525 2_4:+20115894 Msa0319990:CDS
AGGAAACATATCCCCTCATG+AGG 0.649776 2_4:+20116147 Msa0319990:CDS
GATGTAGATGCGATATCAAG+GGG 0.659513 2_4:-20119345 None:intergenic
ACACAATTGATCATAATCTG+TGG 0.661282 2_4:-20119850 None:intergenic
ATAATGGAGAGAGTGGAGAA+GGG 0.683863 2_4:+20119799 Msa0319990:CDS
TGACTCTAGAAAGATGCATG+TGG 0.707312 2_4:+20119725 Msa0319990:CDS
GTAGATGCGATATCAAGGGG+TGG 0.710610 2_4:-20119342 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTCATAAGAATAATT+TGG - chr2_4:20116340-20116359 None:intergenic 10.0%
!! TTATTCTTATGAAAAAATAT+AGG + chr2_4:20116342-20116361 Msa0319990:intron 10.0%
!! TATAAAGTGAAAAAAATAAA+TGG + chr2_4:20116386-20116405 Msa0319990:intron 10.0%
!! GATAAAATTAAATAATCAAA+TGG + chr2_4:20116441-20116460 Msa0319990:intron 10.0%
!! ATAAGAAAAAACTAAATAAA+AGG - chr2_4:20117992-20118011 None:intergenic 10.0%
!! ATTGATAGATTTATTTATAT+TGG + chr2_4:20118229-20118248 Msa0319990:intron 10.0%
!! TTATTAATCTATTTAGTAAA+CGG + chr2_4:20118388-20118407 Msa0319990:intron 10.0%
!! TAATCTATAACAAAAAATTA+AGG - chr2_4:20118737-20118756 None:intergenic 10.0%
!! TATCCTTAAAATTAATATAT+TGG + chr2_4:20118854-20118873 Msa0319990:intron 10.0%
!!! AAACCAATATATTAATTTTA+AGG - chr2_4:20118860-20118879 None:intergenic 10.0%
!! TAATTAATTATGAAATTGTT+TGG + chr2_4:20119193-20119212 Msa0319990:intron 10.0%
!! AATAATATTTATGAAATGAA+GGG + chr2_4:20119519-20119538 Msa0319990:CDS 10.0%
!!! TTTTTATTTGTGATATATGA+AGG + chr2_4:20116058-20116077 Msa0319990:intron 15.0%
!!! TTTTTACTTATAAATGTGAT+TGG - chr2_4:20116835-20116854 None:intergenic 15.0%
!! TATTGAATACATAATGTATT+TGG + chr2_4:20116870-20116889 Msa0319990:intron 15.0%
!! AAACAATAAAAATGTAATCA+TGG + chr2_4:20117210-20117229 Msa0319990:intron 15.0%
!!! TATTAATTTGTTTGAATAAG+TGG + chr2_4:20117625-20117644 Msa0319990:intron 15.0%
!! AGAATGAAATATAAGTATAT+AGG + chr2_4:20118027-20118046 Msa0319990:intron 15.0%
!!! TGAAGAATAGTATATTTTTT+GGG - chr2_4:20118098-20118117 None:intergenic 15.0%
!!! TTGAAGAATAGTATATTTTT+TGG - chr2_4:20118099-20118118 None:intergenic 15.0%
!! AAAATATACTATTCTTCAAT+TGG + chr2_4:20118100-20118119 Msa0319990:intron 15.0%
!! AACTTAATGTTTATTATTTG+AGG - chr2_4:20118150-20118169 None:intergenic 15.0%
!!! TTCTTAAGATTTTTTTTTTG+TGG + chr2_4:20118611-20118630 Msa0319990:intron 15.0%
!!! TTTTATTGTTTCTTTATAGT+TGG + chr2_4:20118888-20118907 Msa0319990:intron 15.0%
!! GAATAATATTTATGAAATGA+AGG + chr2_4:20119518-20119537 Msa0319990:CDS 15.0%
!!! TATTCAATTCATTTTTACTA+GGG - chr2_4:20119572-20119591 None:intergenic 15.0%
!!! ATATTCAATTCATTTTTACT+AGG - chr2_4:20119573-20119592 None:intergenic 15.0%
!! AAATAATCAAATGGTATAGT+TGG + chr2_4:20116450-20116469 Msa0319990:intron 20.0%
!!! AATCAATTTTCCATGTAAAA+AGG - chr2_4:20116573-20116592 None:intergenic 20.0%
!!! TAATGTATTTGGTCTTTATA+TGG + chr2_4:20116881-20116900 Msa0319990:intron 20.0%
!!! TTTTGAATTCATTCAATAGT+TGG - chr2_4:20116908-20116927 None:intergenic 20.0%
!! TATTGAATGAATCTAGAAAA+TGG - chr2_4:20116995-20117014 None:intergenic 20.0%
!! ATGTATGTAGTCTTTATTAT+AGG - chr2_4:20117032-20117051 None:intergenic 20.0%
!! AATTGAATGAATCAAGAAAA+TGG + chr2_4:20117056-20117075 Msa0319990:intron 20.0%
!! AATAAAAATGTAATCATGGA+TGG + chr2_4:20117214-20117233 Msa0319990:intron 20.0%
!!! TGAAACATTTTCTTGTTTAA+AGG + chr2_4:20117539-20117558 Msa0319990:intron 20.0%
!!! TTTTAAGCACATTCATTTTT+TGG - chr2_4:20117594-20117613 None:intergenic 20.0%
!! AAATGAATGTGCTTAAAAAT+TGG + chr2_4:20117596-20117615 Msa0319990:intron 20.0%
!! AATGAATGTGCTTAAAAATT+GGG + chr2_4:20117597-20117616 Msa0319990:intron 20.0%
!! ATTGTATCATATAAACAAAG+TGG - chr2_4:20117924-20117943 None:intergenic 20.0%
!! TACTTATATTTCATTCTAGA+TGG - chr2_4:20118024-20118043 None:intergenic 20.0%
!!! GAAGAATAGTATATTTTTTG+GGG - chr2_4:20118097-20118116 None:intergenic 20.0%
!!! TTATATTGGTTTGATAATTC+CGG + chr2_4:20118243-20118262 Msa0319990:intron 20.0%
!!! ATTTTTCAATGTAAGCAAAT+AGG - chr2_4:20118365-20118384 None:intergenic 20.0%
!!! TGTGATTTTTTTTCATGTAT+TGG + chr2_4:20118530-20118549 Msa0319990:intron 20.0%
!!! TTAAATTTGTTTTTAGTCTC+TGG + chr2_4:20118564-20118583 Msa0319990:intron 20.0%
!!! ATTTTTTTTTTGTGGTGTTT+GGG + chr2_4:20118619-20118638 Msa0319990:intron 20.0%
!! ATAATGAGATAAAGAACTAT+TGG + chr2_4:20119262-20119281 Msa0319990:CDS 20.0%
!! AAATGAATTGAATATTGATG+AGG + chr2_4:20119578-20119597 Msa0319990:CDS 20.0%
!! AATGAATTGAATATTGATGA+GGG + chr2_4:20119579-20119598 Msa0319990:CDS 20.0%
!!! TTCGTAACATGTTTTTAAAT+GGG + chr2_4:20119643-20119662 Msa0319990:CDS 20.0%
!! CTATACTAAATGGCTTATTT+TGG - chr2_4:20115780-20115799 None:intergenic 25.0%
! ACTGATTACATCAAACAAAA+TGG + chr2_4:20115878-20115897 Msa0319990:CDS 25.0%
! AATTAATTACCTGCTTTCTT+AGG - chr2_4:20115926-20115945 None:intergenic 25.0%
!!! TGATATATGAAGGTTTGTTA+AGG + chr2_4:20116068-20116087 Msa0319990:intron 25.0%
!! AAATCAAAAGCCTTTTTACA+TGG + chr2_4:20116560-20116579 Msa0319990:intron 25.0%
! AATCCTTAATCAATGTCTTA+AGG + chr2_4:20116635-20116654 Msa0319990:intron 25.0%
!! GTTTTTGCTTATCAATATAC+CGG + chr2_4:20116934-20116953 Msa0319990:intron 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG - chr2_4:20116971-20116990 None:intergenic 25.0%
!! AATTTTCATAGGAAGAGTTT+TGG - chr2_4:20117482-20117501 None:intergenic 25.0%
!!! TTTTTTGGTATCCTAAAGTT+TGG - chr2_4:20117579-20117598 None:intergenic 25.0%
! ATGAATGTGCTTAAAAATTG+GGG + chr2_4:20117598-20117617 Msa0319990:intron 25.0%
!! TTTGACAACTGAATTTGTTT+GGG - chr2_4:20118175-20118194 None:intergenic 25.0%
!!! TTTTGACAACTGAATTTGTT+TGG - chr2_4:20118176-20118195 None:intergenic 25.0%
! CGGTCAATTATTGATAAATT+TGG + chr2_4:20118408-20118427 Msa0319990:intron 25.0%
! GTAAATTAAAGCAACAACAA+AGG - chr2_4:20118488-20118507 None:intergenic 25.0%
!!! GATTTTTTTTTTGTGGTGTT+TGG + chr2_4:20118618-20118637 Msa0319990:intron 25.0%
!!! TTTTTTTTTTGTGGTGTTTG+GGG + chr2_4:20118620-20118639 Msa0319990:intron 25.0%
! ACAAATGCATAATATATGCA+AGG - chr2_4:20118659-20118678 None:intergenic 25.0%
!! TTTTTGTTGATATTTCACTC+TGG + chr2_4:20119025-20119044 Msa0319990:intron 25.0%
! ATGAAATTGTTTGGTTGTAT+AGG + chr2_4:20119202-20119221 Msa0319990:intron 25.0%
! ACATCCAAAACAATTAATCA+AGG + chr2_4:20119363-20119382 Msa0319990:CDS 25.0%
! CATCCAAAACAATTAATCAA+GGG + chr2_4:20119364-20119383 Msa0319990:CDS 25.0%
!! TTTCCCTTGATTAATTGTTT+TGG - chr2_4:20119370-20119389 None:intergenic 25.0%
!!! GTTGTTTTTTCTTTAGGTAT+TGG - chr2_4:20119453-20119472 None:intergenic 25.0%
!!! TGTGAAGTTGTTTTTTCTTT+AGG - chr2_4:20119459-20119478 None:intergenic 25.0%
! TCACAATACTATAATGTACA+AGG + chr2_4:20119474-20119493 Msa0319990:CDS 25.0%
!!! CTTCGTAACATGTTTTTAAA+TGG + chr2_4:20119642-20119661 Msa0319990:CDS 25.0%
!!! AACATGTTTTTAAATGGGAT+AGG + chr2_4:20119648-20119667 Msa0319990:CDS 25.0%
! GAAATGAAAAGTGAAATTTG+TGG + chr2_4:20119768-20119787 Msa0319990:CDS 25.0%
! ATTATGATCAATTGTGTGAT+TGG + chr2_4:20119856-20119875 Msa0319990:CDS 25.0%
! TTATGATCAATTGTGTGATT+GGG + chr2_4:20119857-20119876 Msa0319990:CDS 25.0%
TACATCAAACAAAATGGTGA+AGG + chr2_4:20115884-20115903 Msa0319990:CDS 30.0%
ATATCGAATTGAGAGTAAAG+CGG + chr2_4:20116419-20116438 Msa0319990:intron 30.0%
! TCTCCTTAAGACATTGATTA+AGG - chr2_4:20116641-20116660 None:intergenic 30.0%
CATATTAAGTGTAGAGAAGT+GGG - chr2_4:20116789-20116808 None:intergenic 30.0%
ACATATTAAGTGTAGAGAAG+TGG - chr2_4:20116790-20116809 None:intergenic 30.0%
AATGTGAGAACGTTTATTCT+TGG - chr2_4:20117131-20117150 None:intergenic 30.0%
AAACATTTATGATTGACCTC+CGG - chr2_4:20117271-20117290 None:intergenic 30.0%
AAAATCAGTGTCCAAAGATA+TGG - chr2_4:20117309-20117328 None:intergenic 30.0%
!! ACTGATTTTCAAATCGAGTA+GGG + chr2_4:20117320-20117339 Msa0319990:intron 30.0%
! TTTTTACATACGACCAAATC+CGG + chr2_4:20117451-20117470 Msa0319990:intron 30.0%
ACTCTTCCTATGAAAATTGA+CGG + chr2_4:20117484-20117503 Msa0319990:intron 30.0%
ATGTTTCACAGAAACAAAGT+AGG - chr2_4:20117527-20117546 None:intergenic 30.0%
!!! AAACTAGTTTTTTGCCATTG+TGG - chr2_4:20117733-20117752 None:intergenic 30.0%
TGATACAATCAATACCTGAT+AGG + chr2_4:20117935-20117954 Msa0319990:intron 30.0%
GATACAATCAATACCTGATA+GGG + chr2_4:20117936-20117955 Msa0319990:intron 30.0%
TTATCAAATTCAACCCTATC+AGG - chr2_4:20117952-20117971 None:intergenic 30.0%
AATATAAGTATATAGGTGCC+AGG + chr2_4:20118034-20118053 Msa0319990:intron 30.0%
ATATAAGTATATAGGTGCCA+GGG + chr2_4:20118035-20118054 Msa0319990:intron 30.0%
TATACTATTCTTCAATTGGC+TGG + chr2_4:20118104-20118123 Msa0319990:intron 30.0%
GGCTGGTATATAATTATATC+CGG + chr2_4:20118121-20118140 Msa0319990:intron 30.0%
! TGTTTATTATTTGAGGTAGC+CGG - chr2_4:20118143-20118162 None:intergenic 30.0%
! TTGACAACTGAATTTGTTTG+GGG - chr2_4:20118174-20118193 None:intergenic 30.0%
TCTATAACTGTTATTGAGAC+CGG - chr2_4:20118265-20118284 None:intergenic 30.0%
AAATTGTTTGGTTGTATAGG+TGG + chr2_4:20119205-20119224 Msa0319990:intron 30.0%
!! TTCTTTAGGTATTGGTTCAA+GGG - chr2_4:20119445-20119464 None:intergenic 30.0%
!! TTTCTTTAGGTATTGGTTCA+AGG - chr2_4:20119446-20119465 None:intergenic 30.0%
ATTGAATATTGATGAGGGTT+TGG + chr2_4:20119584-20119603 Msa0319990:CDS 30.0%
TTGAATATTGATGAGGGTTT+GGG + chr2_4:20119585-20119604 Msa0319990:CDS 30.0%
TCATCATCTAGCCATTTATA+TGG - chr2_4:20119612-20119631 None:intergenic 30.0%
AATGCATGAGAATGATGATA+AGG + chr2_4:20119689-20119708 Msa0319990:CDS 30.0%
ATGCATGAGAATGATGATAA+GGG + chr2_4:20119690-20119709 Msa0319990:CDS 30.0%
!! GGAGATAATGGAAACAAATA+AGG + chr2_4:20119746-20119765 Msa0319990:CDS 30.0%
ATTTGTGGCTCATCATATAA+TGG + chr2_4:20119783-20119802 Msa0319990:CDS 30.0%
ACACAATTGATCATAATCTG+TGG - chr2_4:20119853-20119872 None:intergenic 30.0%
AAGCCATTTAGTATAGCCAA+TGG + chr2_4:20115784-20115803 Msa0319990:exon 35.0%
AGCCATTTAGTATAGCCAAT+GGG + chr2_4:20115785-20115804 Msa0319990:exon 35.0%
! TTCCCATTGGCTATACTAAA+TGG - chr2_4:20115790-20115809 None:intergenic 35.0%
! CTCCTTGTTGTGAAAAAGTT+GGG + chr2_4:20115813-20115832 Msa0319990:CDS 35.0%
!!! AACCCAACTTTTTCACAACA+AGG - chr2_4:20115818-20115837 None:intergenic 35.0%
!! GAAAAAGTTGGGTTGAAGAA+AGG + chr2_4:20115824-20115843 Msa0319990:CDS 35.0%
AACAAAATGGTGAAGGATCT+TGG + chr2_4:20115891-20115910 Msa0319990:CDS 35.0%
!! TATGAAGGTTTGTTAAGGTG+TGG + chr2_4:20116073-20116092 Msa0319990:intron 35.0%
!! ATGAAGGTTTGTTAAGGTGT+GGG + chr2_4:20116074-20116093 Msa0319990:intron 35.0%
AATGATTTCTTCCTCATGAG+GGG - chr2_4:20116161-20116180 None:intergenic 35.0%
CAATGATTTCTTCCTCATGA+GGG - chr2_4:20116162-20116181 None:intergenic 35.0%
ACAATGATTTCTTCCTCATG+AGG - chr2_4:20116163-20116182 None:intergenic 35.0%
ATAACATCCATTGTGTGAGA+GGG - chr2_4:20116245-20116264 None:intergenic 35.0%
! TGATTTTCGTCTCACAATGA+TGG - chr2_4:20116546-20116565 None:intergenic 35.0%
CTGCAAAGACATTGATACTT+AGG + chr2_4:20116739-20116758 Msa0319990:intron 35.0%
CGTGCATAAATCCATATCTT+TGG + chr2_4:20117295-20117314 Msa0319990:intron 35.0%
!!! CACTGATTTTCAAATCGAGT+AGG + chr2_4:20117319-20117338 Msa0319990:intron 35.0%
TCTTGTACTCCTTAGATCTT+TGG + chr2_4:20117405-20117424 Msa0319990:intron 35.0%
! TTTTACATACGACCAAATCC+GGG + chr2_4:20117452-20117471 Msa0319990:intron 35.0%
CTCTTCCTATGAAAATTGAC+GGG + chr2_4:20117485-20117504 Msa0319990:intron 35.0%
! GTTAACCCGTCAATTTTCAT+AGG - chr2_4:20117493-20117512 None:intergenic 35.0%
CCTAAAGTTTGGTTGGATAT+CGG - chr2_4:20117568-20117587 None:intergenic 35.0%
TTGGTATCCTAAAGTTTGGT+TGG - chr2_4:20117575-20117594 None:intergenic 35.0%
GTACTCTCTATATTCCACAA+TGG + chr2_4:20117716-20117735 Msa0319990:intron 35.0%
TATAAGTATATAGGTGCCAG+GGG + chr2_4:20118036-20118055 Msa0319990:intron 35.0%
!!! TATATTTTTTGGGGTAGCCA+AGG - chr2_4:20118088-20118107 None:intergenic 35.0%
CATAATATATGCAAGGTCCA+AGG - chr2_4:20118652-20118671 None:intergenic 35.0%
! TGAGTTTAGCTTAGTTGGTA+AGG - chr2_4:20118682-20118701 None:intergenic 35.0%
CTAGCAAAAAAATTACGCAG+GGG - chr2_4:20118914-20118933 None:intergenic 35.0%
GCTAGCAAAAAAATTACGCA+GGG - chr2_4:20118915-20118934 None:intergenic 35.0%
AGCTAGCAAAAAAATTACGC+AGG - chr2_4:20118916-20118935 None:intergenic 35.0%
ATTATGTTTGCACCTATCAG+CGG - chr2_4:20118942-20118961 None:intergenic 35.0%
TTGTTGATATTTCACTCTGG+AGG + chr2_4:20119028-20119047 Msa0319990:intron 35.0%
AATGAGCAACAAGACATGTT+TGG - chr2_4:20119126-20119145 None:intergenic 35.0%
ATTGGAACTCTCATTTGAGA+AGG + chr2_4:20119280-20119299 Msa0319990:CDS 35.0%
CTATTGTCTTCTTCTATGCT+TGG - chr2_4:20119402-20119421 None:intergenic 35.0%
CATAGAAGAAGACAATAGCA+TGG + chr2_4:20119404-20119423 Msa0319990:CDS 35.0%
AAAGATGCATGTGGAGATAA+TGG + chr2_4:20119734-20119753 Msa0319990:CDS 35.0%
! TCATCATATAATGGAGAGAG+TGG + chr2_4:20119792-20119811 Msa0319990:CDS 35.0%
TTGTCAAGAAGACCAAATGA+AGG + chr2_4:20119884-20119903 Msa0319990:CDS 35.0%
! GCTCCTTGTTGTGAAAAAGT+TGG + chr2_4:20115812-20115831 Msa0319990:CDS 40.0%
!! TTGGGTTGAAGAAAGGAAGA+TGG + chr2_4:20115831-20115850 Msa0319990:CDS 40.0%
AAAATGGTGAAGGATCTTGG+AGG + chr2_4:20115894-20115913 Msa0319990:CDS 40.0%
! AGGTTTTTGCCTAAGAAAGC+AGG + chr2_4:20115914-20115933 Msa0319990:CDS 40.0%
GGAAGAGTTGTAGACTAAGA+TGG + chr2_4:20116095-20116114 Msa0319990:CDS 40.0%
TGCATGCTGTTCTTGGAAAT+AGG + chr2_4:20116188-20116207 Msa0319990:CDS 40.0%
GAGAGGGGAGTAGAAATTAA+GGG - chr2_4:20116229-20116248 None:intergenic 40.0%
TGAGAGGGGAGTAGAAATTA+AGG - chr2_4:20116230-20116249 None:intergenic 40.0%
TAACATCCATTGTGTGAGAG+GGG - chr2_4:20116244-20116263 None:intergenic 40.0%
CATAACATCCATTGTGTGAG+AGG - chr2_4:20116246-20116265 None:intergenic 40.0%
TGCTTATATTAGTGACCGGA+GGG - chr2_4:20116967-20116986 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG - chr2_4:20116968-20116987 None:intergenic 40.0%
! TTTTTGCCCGTATTAGTGAC+CGG + chr2_4:20117080-20117099 Msa0319990:intron 40.0%
TGCTAGATATATACACCCTC+CGG - chr2_4:20117102-20117121 None:intergenic 40.0%
! GAGGGTGTATATATCTAGCA+TGG + chr2_4:20117102-20117121 Msa0319990:intron 40.0%
ATAGCGTGTCCAAAGATCTA+AGG - chr2_4:20117417-20117436 None:intergenic 40.0%
!! AGTTTTGGTAATCCCGGATT+TGG - chr2_4:20117467-20117486 None:intergenic 40.0%
!! AGGAAGAGTTTTGGTAATCC+CGG - chr2_4:20117473-20117492 None:intergenic 40.0%
CCGATATCCAACCAAACTTT+AGG + chr2_4:20117565-20117584 Msa0319990:intron 40.0%
!! TTTAGTCTCTGGAACACTTG+CGG + chr2_4:20118575-20118594 Msa0319990:intron 40.0%
GTGATAGCATCACATTTACC+AGG + chr2_4:20119231-20119250 Msa0319990:CDS 40.0%
ATCTCATTATCTGTTCGTCC+TGG - chr2_4:20119252-20119271 None:intergenic 40.0%
GATGTAGATGCGATATCAAG+GGG - chr2_4:20119348-20119367 None:intergenic 40.0%
GGATGTAGATGCGATATCAA+GGG - chr2_4:20119349-20119368 None:intergenic 40.0%
TGGATGTAGATGCGATATCA+AGG - chr2_4:20119350-20119369 None:intergenic 40.0%
! AGGGTTTGGGACCATATAAA+TGG + chr2_4:20119598-20119617 Msa0319990:CDS 40.0%
! TGACTCTAGAAAGATGCATG+TGG + chr2_4:20119725-20119744 Msa0319990:CDS 40.0%
! TATAATGGAGAGAGTGGAGA+AGG + chr2_4:20119798-20119817 Msa0319990:CDS 40.0%
! ATAATGGAGAGAGTGGAGAA+GGG + chr2_4:20119799-20119818 Msa0319990:CDS 40.0%
TTCATGATTTCACCAATGCC+TGG - chr2_4:20119924-20119943 None:intergenic 40.0%
!! GGCATTGGTGAAATCATGAA+TGG + chr2_4:20119924-20119943 Msa0319990:CDS 40.0%
TTGAGAGCAGATGTGAAGAG+AGG + chr2_4:20116127-20116146 Msa0319990:CDS 45.0%
AGGAAACATATCCCCTCATG+AGG + chr2_4:20116147-20116166 Msa0319990:CDS 45.0%
! GTCAAGTTGCATGCTGTTCT+TGG + chr2_4:20116181-20116200 Msa0319990:CDS 45.0%
TGGAAAGCAACTTGAAGACC+CGG + chr2_4:20117234-20117253 Msa0319990:intron 45.0%
CATTTATGATTGACCTCCGG+AGG - chr2_4:20117268-20117287 None:intergenic 45.0%
! CTCCATAGCTTGTCGCTTAT+GGG - chr2_4:20117347-20117366 None:intergenic 45.0%
! ACTCCATAGCTTGTCGCTTA+TGG - chr2_4:20117348-20117367 None:intergenic 45.0%
! CCTCGTGAGTTTAGCTTAGT+TGG - chr2_4:20118687-20118706 None:intergenic 45.0%
CCAACTAAGCTAAACTCACG+AGG + chr2_4:20118684-20118703 Msa0319990:intron 45.0%
! ACCAAATGAAGGCTTGCTTG+TGG + chr2_4:20119895-20119914 Msa0319990:CDS 45.0%
! CCAAATGAAGGCTTGCTTGT+GGG + chr2_4:20119896-20119915 Msa0319990:CDS 45.0%
! CAAATGAAGGCTTGCTTGTG+GGG + chr2_4:20119897-20119916 Msa0319990:CDS 45.0%
CAACAAGGAGCTCTTCCCAT+TGG - chr2_4:20115803-20115822 None:intergenic 50.0%
!! AGGAAGATGGACTGCTGAAG+AGG + chr2_4:20115844-20115863 Msa0319990:CDS 50.0%
TCTACTCCCCTCTCACACAA+TGG + chr2_4:20116235-20116254 Msa0319990:intron 50.0%
! TATACCGGAAGTACACCCTC+CGG + chr2_4:20116949-20116968 Msa0319990:intron 50.0%
ACACCCTCCGGTCACTAATA+CGG - chr2_4:20116961-20116980 None:intergenic 50.0%
TATGATTGACCTCCGGAGGA+AGG - chr2_4:20117264-20117283 None:intergenic 50.0%
GTCCCATAAGCGACAAGCTA+TGG + chr2_4:20117342-20117361 Msa0319990:intron 50.0%
GCGTAGCCCTTCATGAACAA+GGG + chr2_4:20118058-20118077 Msa0319990:intron 50.0%
CGTAGCCCTTCATGAACAAG+GGG + chr2_4:20118059-20118078 Msa0319990:intron 50.0%
GGCTACCCCTTGTTCATGAA+GGG - chr2_4:20118067-20118086 None:intergenic 50.0%
AGGCTACCCCTTGTTCATGA+AGG - chr2_4:20118068-20118087 None:intergenic 50.0%
TCATGAACAAGGGGTAGCCT+TGG + chr2_4:20118068-20118087 Msa0319990:intron 50.0%
GTAGATGCGATATCAAGGGG+TGG - chr2_4:20119345-20119364 None:intergenic 50.0%
CCCACAAGCAAGCCTTCATT+TGG - chr2_4:20119899-20119918 None:intergenic 50.0%
TTGCCCGTATTAGTGACCGG+AGG + chr2_4:20117083-20117102 Msa0319990:intron 55.0%
TGCCCGTATTAGTGACCGGA+GGG + chr2_4:20117084-20117103 Msa0319990:intron 55.0%
CACCCTCCGGTCACTAATAC+GGG - chr2_4:20117089-20117108 None:intergenic 55.0%
GGCGTAGCCCTTCATGAACA+AGG + chr2_4:20118057-20118076 Msa0319990:intron 55.0%
! GGTGTTTGGGGTTCGAACCT+TGG + chr2_4:20118632-20118651 Msa0319990:intron 55.0%
! TTGCTAGCTTCGCCGCTGAT+AGG + chr2_4:20118927-20118946 Msa0319990:intron 55.0%
!! GGGTGGTGGAGACTCGTTTA+TGG - chr2_4:20119328-20119347 None:intergenic 55.0%
GATGCGATATCAAGGGGTGG+TGG - chr2_4:20119342-20119361 None:intergenic 55.0%
! GTGACCGGAGGGTGTACTTC+CGG - chr2_4:20116956-20116975 None:intergenic 60.0%
AGACCCGGTCTTCCTTCCTC+CGG + chr2_4:20117249-20117268 Msa0319990:intron 60.0%
ACCTCCGGAGGAAGGAAGAC+CGG - chr2_4:20117256-20117275 None:intergenic 60.0%
TTCATGAAGGGCTACGCCCC+TGG - chr2_4:20118055-20118074 None:intergenic 60.0%
! AAGGCTTGCTTGTGGGGTCC+AGG + chr2_4:20119903-20119922 Msa0319990:CDS 60.0%
TGCTTGTGGGGTCCAGGCAT+TGG + chr2_4:20119909-20119928 Msa0319990:CDS 60.0%
CCTCCGGAGGAAGGAAGACC+GGG - chr2_4:20117255-20117274 None:intergenic 65.0%
CCCGGTCTTCCTTCCTCCGG+AGG + chr2_4:20117252-20117271 Msa0319990:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 20115777 20119959 20115777 ID=Msa0319990;Name=Msa0319990
chr2_4 mRNA 20115777 20119959 20115777 ID=Msa0319990-mRNA-1;Parent=Msa0319990;Name=Msa0319990-mRNA-1;_AED=0.08;_eAED=0.08;_QI=26|1|0.66|1|1|1|3|0|332
chr2_4 exon 20115777 20115935 20115777 ID=Msa0319990-mRNA-1:exon:7428;Parent=Msa0319990-mRNA-1
chr2_4 exon 20116080 20116209 20116080 ID=Msa0319990-mRNA-1:exon:7429;Parent=Msa0319990-mRNA-1
chr2_4 exon 20119224 20119959 20119224 ID=Msa0319990-mRNA-1:exon:7430;Parent=Msa0319990-mRNA-1
chr2_4 five_prime_UTR 20115777 20115802 20115777 ID=Msa0319990-mRNA-1:five_prime_utr;Parent=Msa0319990-mRNA-1
chr2_4 CDS 20115803 20115935 20115803 ID=Msa0319990-mRNA-1:cds;Parent=Msa0319990-mRNA-1
chr2_4 CDS 20116080 20116209 20116080 ID=Msa0319990-mRNA-1:cds;Parent=Msa0319990-mRNA-1
chr2_4 CDS 20119224 20119959 20119224 ID=Msa0319990-mRNA-1:cds;Parent=Msa0319990-mRNA-1
Gene Sequence

>Msa0319990

ATGGGAAGAGCTCCTTGTTGTGAAAAAGTTGGGTTGAAGAAAGGAAGATGGACTGCTGAAGAGGATAAAATCTTGACTGATTACATCAAACAAAATGGTGAAGGATCTTGGAGGTTTTTGCCTAAGAAAGCAGGTTTGTTAAGGTGTGGGAAGAGTTGTAGACTAAGATGGATCAACTATTTGAGAGCAGATGTGAAGAGAGGAAACATATCCCCTCATGAGGAAGAAATCATTGTCAAGTTGCATGCTGTTCTTGGAAATAGGTGGTCAGTGATAGCATCACATTTACCAGGACGAACAGATAATGAGATAAAGAACTATTGGAACTCTCATTTGAGAAGGAAAATTTACTGCTTCATGAGATCCATAAACGAGTCTCCACCACCCCTTGATATCGCATCTACATCCAAAACAATTAATCAAGGGAAAATAAATAATCCAAGCATAGAAGAAGACAATAGCATGGCTTTGATTCAAAATTCCCTTGAACCAATACCTAAAGAAAAAACAACTTCACAATACTATAATGTACAAGGAGTTGAAGATATTTCGTGTGAGAATAATATTTATGAAATGAAGGGTAACAAAAATAATACAGTTGCATCATACCCTAGTAAAAATGAATTGAATATTGATGAGGGTTTGGGACCATATAAATGGCTAGATGATGAAATTATGAAACTTCGTAACATGTTTTTAAATGGGATAGGAAATTATAATTATGTAACAATGCATGAGAATGATGATAAGGGTAATTATGAATGTGACTCTAGAAAGATGCATGTGGAGATAATGGAAACAAATAAGGAAATGAAAAGTGAAATTTGTGGCTCATCATATAATGGAGAGAGTGGAGAAGGGTACATTTCTAATGCATCAGTAAATTCTGCCACAGATTATGATCAATTGTGTGATTGGGACTTTTGTCAAGAAGACCAAATGAAGGCTTGCTTGTGGGGTCCAGGCATTGGTGAAATCATGAATGGTTTTTATCAGTAA
Protein sequence

>Msa0319990

MGRAPCCEKVGLKKGRWTAEEDKILTDYIKQNGEGSWRFLPKKAGLLRCGKSCRLRWINYLRADVKRGNISPHEEEIIVKLHAVLGNRWSVIASHLPGRTDNEIKNYWNSHLRRKIYCFMRSINESPPPLDIASTSKTINQGKINNPSIEEDNSMALIQNSLEPIPKEKTTSQYYNVQGVEDISCENNIYEMKGNKNNTVASYPSKNELNIDEGLGPYKWLDDEIMKLRNMFLNGIGNYNYVTMHENDDKGNYECDSRKMHVEIMETNKEMKSEICGSSYNGESGEGYISNASVNSATDYDQLCDWDFCQEDQMKACLWGPGIGEIMNGFYQ*