AlfalfaGEDB | Msa0242540

M. sativa cultivar zhongmu-4 / Msa0242540

KEGG: K09422
GO: GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009812 GO:0009813 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010033 GO:0010224 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0042221 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046148 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051552 GO:0051553 GO:0051554 GO:0051555 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1900384 GO:1900386 GO:1901363 GO:1901576 GO:1901615 GO:1901617 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0242540	XP_003594801.1	93.373	332	10	1	1	320	1	332	0.0	637

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0242540	sp\|Q9FJ07\|MY111_ARATH	52.632	228	95	2	1	228	1	215	2.58e-72	230

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0242540	G7IMV7	93.373	332	10	1	1	320	1	332	0.0	637

TFs/TRs:

Gene ID	Type	Classification
Msa0242540	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0194380	Msa0242540	0.808747	2.659904e-50	-8.615850e-47
Msa0200030	Msa0242540	0.859882	3.041751e-63	-8.615850e-47
Msa0206800	Msa0242540	0.802165	6.384146e-49	-8.615850e-47
Msa0236110	Msa0242540	0.801361	9.338079e-49	-8.615850e-47
Msa0242540	Msa0280750	0.938548	5.606185e-99	-8.615850e-47
Msa0242540	Msa0314630	0.801540	8.582359e-49	-8.615850e-47
Msa0242540	Msa0319990	0.802191	6.307302e-49	-8.615850e-47
Msa0242540	Msa0373960	0.801662	8.099514e-49	-8.615850e-47
Msa0242540	Msa0424330	0.829924	3.920051e-55	-8.615850e-47
Msa0242540	Msa0515950	0.815532	8.810986e-52	-8.615850e-47
Msa0242540	Msa0546710	0.832634	8.450979e-56	-8.615850e-47
Msa0242540	Msa0575740	0.810673	1.025624e-50	-8.615850e-47
Msa0242540	Msa0591800	0.807247	5.547205e-50	-8.615850e-47
Msa0242540	Msa0608220	0.819808	9.560463e-53	-8.615850e-47
Msa0242540	Msa0639460	0.820356	7.163451e-53	-8.615850e-47
Msa0242540	Msa0682360	0.845142	4.884625e-59	-8.615850e-47
Msa0242540	Msa0929870	0.800826	1.200900e-48	-8.615850e-47
Msa0242540	Msa0946210	0.818772	1.646070e-52	-8.615850e-47
Msa0242540	Msa0965310	0.813245	2.821355e-51	-8.615850e-47
Msa0242540	Msa0979510	0.819836	9.419872e-53	-8.615850e-47
Msa0242540	Msa0999340	0.808157	3.554965e-50	-8.615850e-47
Msa0242540	Msa1092020	0.807473	4.969045e-50	-8.615850e-47
Msa0242540	Msa1228190	0.828190	1.031965e-54	-8.615850e-47
Msa0242540	Msa1294290	0.806525	7.887366e-50	-8.615850e-47
Msa0242540	Msa1345420	0.807458	5.005461e-50	-8.615850e-47
Msa0242540	Msa1389050	0.804452	2.146093e-49	-8.615850e-47
Msa0242540	Msa1462530	0.803892	2.806192e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0242540	MtrunA17_Chr2g0294821	91.803	244	8	1	89	320	5	248	1.78e-163	455
Msa0242540	MtrunA17_Chr4g0068061	48.361	366	116	12	1	320	1	339	5.11e-93	280
Msa0242540	MtrunA17_Chr1g0194951	72.464	138	37	1	1	137	1	138	2.15e-67	215
Msa0242540	MtrunA17_Chr7g0269831	84.874	119	18	0	1	119	1	119	2.03e-65	209
Msa0242540	MtrunA17_Chr7g0275911	68.103	116	37	0	1	116	1	116	9.32e-60	192
Msa0242540	MtrunA17_Chr1g0167661	54.190	179	69	4	1	179	1	166	1.28e-59	191
Msa0242540	MtrunA17_Chr2g0294811	93.478	92	6	0	1	92	1	92	4.20e-59	185
Msa0242540	MtrunA17_Chr8g0346561	69.828	116	35	0	1	116	1	116	5.46e-59	191
Msa0242540	MtrunA17_Chr4g0070611	70.690	116	34	0	1	116	1	116	1.56e-58	190
Msa0242540	MtrunA17_Chr4g0070641	70.690	116	34	0	1	116	1	116	2.92e-58	185
Msa0242540	MtrunA17_Chr1g0187761	70.690	116	34	0	1	116	1	116	3.12e-58	188
Msa0242540	MtrunA17_Chr8g0349261	66.942	121	38	2	1	119	1	121	8.04e-58	188
Msa0242540	MtrunA17_Chr3g0121241	70.536	112	33	0	5	116	35	146	8.79e-58	188
Msa0242540	MtrunA17_Chr3g0131121	56.962	158	56	2	1	146	1	158	9.14e-58	188
Msa0242540	MtrunA17_Chr7g0217741	70.690	116	34	0	1	116	1	116	9.79e-58	188
Msa0242540	MtrunA17_Chr4g0039971	69.828	116	35	0	1	116	2	117	1.14e-57	189
Msa0242540	MtrunA17_Chr4g0037141	61.972	142	51	2	1	141	1	140	1.19e-57	187
Msa0242540	MtrunA17_Chr3g0115821	61.481	135	52	0	1	135	1	135	1.37e-57	189
Msa0242540	MtrunA17_Chr1g0203411	63.846	130	44	1	1	130	1	127	1.49e-57	187
Msa0242540	MtrunA17_Chr4g0042671	71.552	116	33	0	1	116	1	116	2.32e-57	190
Msa0242540	MtrunA17_Chr6g0453471	69.828	116	35	0	1	116	1	116	3.79e-57	188
Msa0242540	MtrunA17_Chr1g0167691	68.966	116	36	0	1	116	1	116	9.98e-57	184
Msa0242540	MtrunA17_Chr4g0048511	60.993	141	54	1	1	140	1	141	1.09e-56	187
Msa0242540	MtrunA17_Chr2g0281071	70.085	117	34	1	1	116	1	117	3.50e-56	185
Msa0242540	MtrunA17_Chr7g0274581	65.517	116	40	0	1	116	1	116	5.63e-56	180
Msa0242540	MtrunA17_Chr4g0060721	58.741	143	56	1	1	143	2	141	8.14e-56	184
Msa0242540	MtrunA17_Chr3g0110351	68.966	116	36	0	1	116	1	116	1.50e-55	182
Msa0242540	MtrunA17_Chr8g0385321	68.376	117	37	0	1	117	1	117	2.46e-55	182
Msa0242540	MtrunA17_Chr7g0261281	66.379	116	39	0	1	116	1	116	2.96e-55	181
Msa0242540	MtrunA17_Chr5g0434571	68.966	116	36	0	1	116	37	152	3.58e-55	183
Msa0242540	MtrunA17_Chr2g0323411	68.103	116	37	0	1	116	1	116	7.31e-55	181
Msa0242540	MtrunA17_Chr5g0410961	50.000	178	76	2	1	165	1	178	1.52e-54	181
Msa0242540	MtrunA17_Chr7g0254411	61.111	126	49	0	1	126	1	126	3.15e-54	180
Msa0242540	MtrunA17_Chr7g0228891	61.719	128	48	1	1	127	1	128	2.81e-53	176
Msa0242540	MtrunA17_Chr3g0092401	63.793	116	42	0	1	116	2	117	8.15e-53	176
Msa0242540	MtrunA17_Chr5g0435101	64.912	114	40	0	3	116	2	115	6.38e-52	170
Msa0242540	MtrunA17_Chr5g0395281	63.793	116	42	0	1	116	1	116	1.14e-51	172
Msa0242540	MtrunA17_Chr4g0057031	64.655	116	41	0	1	116	1	116	1.46e-51	171
Msa0242540	MtrunA17_Chr3g0103281	62.931	116	43	0	1	116	1	116	6.81e-51	171
Msa0242540	MtrunA17_Chr7g0217221	62.069	116	44	0	1	116	1	116	1.42e-50	169
Msa0242540	MtrunA17_Chr1g0193801	46.500	200	98	3	1	197	1	194	4.00e-49	168
Msa0242540	MtrunA17_Chr4g0044421	55.479	146	56	3	3	139	2	147	8.70e-49	161
Msa0242540	MtrunA17_Chr8g0387421	61.207	116	45	0	1	116	1	116	2.22e-48	164
Msa0242540	MtrunA17_Chr1g0193371	63.793	116	42	0	1	116	1	116	3.53e-48	165
Msa0242540	MtrunA17_Chr2g0330041	59.483	116	47	0	1	116	1	116	1.97e-47	164
Msa0242540	MtrunA17_Chr7g0270891	62.931	116	43	0	1	116	1	116	2.15e-47	163
Msa0242540	MtrunA17_Chr4g0058631	62.069	116	44	0	1	116	1	116	2.71e-47	162
Msa0242540	MtrunA17_Chr8g0342541	60.169	118	47	0	1	118	1	118	4.10e-47	162
Msa0242540	MtrunA17_Chr2g0311221	63.636	110	40	0	2	111	4	113	4.55e-47	161
Msa0242540	MtrunA17_Chr7g0264641	53.333	135	62	1	1	134	1	135	5.21e-47	159
Msa0242540	MtrunA17_Chr4g0022891	62.832	113	42	0	1	113	1	113	5.64e-47	158
Msa0242540	MtrunA17_Chr4g0022931	58.974	117	47	1	1	116	1	117	8.60e-47	159
Msa0242540	MtrunA17_Chr6g0452271	57.759	116	49	0	1	116	1	116	1.21e-46	160
Msa0242540	MtrunA17_Chr6g0453211	49.143	175	82	4	1	172	1	171	1.55e-46	159
Msa0242540	MtrunA17_Chr5g0397231	62.727	110	41	0	1	110	1	110	1.78e-46	160
Msa0242540	MtrunA17_Chr5g0400821	59.829	117	46	1	1	116	1	117	1.83e-46	159
Msa0242540	MtrunA17_Chr2g0323351	60.345	116	46	0	1	116	1	116	3.22e-46	157
Msa0242540	MtrunA17_Chr1g0151941	58.120	117	48	1	1	116	1	117	5.22e-46	156
Msa0242540	MtrunA17_Chr4g0028311	58.974	117	47	1	1	116	1	117	6.49e-46	158
Msa0242540	MtrunA17_Chr4g0022911	56.897	116	49	1	1	115	1	116	1.28e-45	156
Msa0242540	MtrunA17_Chr4g0022901	58.621	116	47	1	1	115	1	116	1.44e-45	155
Msa0242540	MtrunA17_Chr8g0342521	60.345	116	46	0	1	116	1	116	2.65e-45	157
Msa0242540	MtrunA17_Chr3g0117091	61.207	116	45	0	1	116	1	116	2.86e-45	157
Msa0242540	MtrunA17_Chr7g0271241	65.138	109	38	0	1	109	1	109	4.55e-45	157
Msa0242540	MtrunA17_Chr1g0152011	58.974	117	47	1	1	116	1	117	5.54e-45	156
Msa0242540	MtrunA17_Chr3g0135311	57.627	118	49	1	1	117	1	118	6.37e-45	156
Msa0242540	MtrunA17_Chr1g0211161	61.404	114	44	0	3	116	4	117	1.15e-44	152
Msa0242540	MtrunA17_Chr2g0327351	61.261	111	42	1	1	110	1	111	1.81e-44	154
Msa0242540	MtrunA17_Chr4g0032401	49.068	161	74	3	12	166	17	175	2.76e-44	154
Msa0242540	MtrunA17_Chr2g0328771	40.404	198	109	2	12	204	20	213	3.47e-44	153
Msa0242540	MtrunA17_Chr2g0309911	58.559	111	46	0	6	116	5	115	5.73e-44	152
Msa0242540	MtrunA17_Chr4g0022881	57.627	118	50	0	1	118	1	118	7.86e-44	150
Msa0242540	MtrunA17_Chr7g0228231	63.810	105	38	0	12	116	14	118	1.62e-43	148
Msa0242540	MtrunA17_Chr6g0450101	58.475	118	47	1	1	116	1	118	2.40e-43	148
Msa0242540	MtrunA17_Chr1g0168661	55.200	125	46	1	13	137	22	136	7.96e-43	148
Msa0242540	MtrunA17_Chr4g0054391	60.909	110	42	1	1	109	1	110	8.41e-43	149
Msa0242540	MtrunA17_Chr4g0072751	59.459	111	44	1	1	110	1	111	1.58e-42	150
Msa0242540	MtrunA17_Chr3g0088461	60.185	108	43	0	9	116	19	126	2.21e-42	149
Msa0242540	MtrunA17_Chr1g0209661	58.333	108	45	0	8	115	23	130	2.99e-42	148
Msa0242540	MtrunA17_Chr8g0342481	55.833	120	52	1	1	119	1	120	3.59e-42	150
Msa0242540	MtrunA17_Chr8g0354661	60.377	106	42	0	10	115	35	140	4.62e-42	152
Msa0242540	MtrunA17_Chr4g0055981	49.324	148	70	1	9	156	52	194	1.12e-41	144
Msa0242540	MtrunA17_Chr6g0487491	54.032	124	48	2	1	115	1	124	1.14e-41	145
Msa0242540	MtrunA17_Chr1g0186061	61.165	103	40	0	13	115	21	123	5.75e-41	143
Msa0242540	MtrunA17_Chr1g0203441	58.120	117	48	1	1	116	1	117	7.86e-41	143
Msa0242540	MtrunA17_Chr8g0343831	60.194	103	41	0	14	116	10	112	1.82e-40	142
Msa0242540	MtrunA17_Chr4g0042611	70.455	88	26	0	1	88	1	88	2.29e-40	136
Msa0242540	MtrunA17_Chr3g0080861	57.009	107	46	0	10	116	35	141	2.93e-40	147
Msa0242540	MtrunA17_Chr1g0194291	61.538	104	40	0	9	112	18	121	4.16e-40	141
Msa0242540	MtrunA17_Chr6g0470971	58.036	112	47	0	4	115	6	117	4.42e-40	142
Msa0242540	MtrunA17_Chr7g0240821	41.667	180	95	2	17	196	6	175	5.45e-40	140
Msa0242540	MtrunA17_Chr2g0322521	58.879	107	44	0	9	115	26	132	1.96e-39	143
Msa0242540	MtrunA17_Chr5g0417821	57.009	107	46	0	10	116	5	111	4.15e-39	139
Msa0242540	MtrunA17_Chr5g0434831	56.604	106	46	0	11	116	6	111	4.75e-39	136
Msa0242540	MtrunA17_Chr5g0434911	52.727	110	52	0	7	116	16	125	8.23e-39	138
Msa0242540	MtrunA17_Chr7g0220341	52.500	120	55	1	10	127	23	142	8.47e-39	138
Msa0242540	MtrunA17_Chr5g0434931	53.774	106	49	0	11	116	34	139	1.96e-38	137
Msa0242540	MtrunA17_Chr3g0099131	57.547	106	45	0	10	115	39	144	4.17e-38	142
Msa0242540	MtrunA17_Chr7g0228991	52.830	106	50	0	11	116	28	133	3.01e-36	131
Msa0242540	MtrunA17_Chr1g0194301	53.509	114	50	1	12	122	33	146	3.41e-36	131
Msa0242540	MtrunA17_Chr2g0327821	53.846	104	48	0	12	115	6	109	4.18e-36	130
Msa0242540	MtrunA17_Chr1g0192411	52.778	108	51	0	8	115	8	115	5.38e-36	134
Msa0242540	MtrunA17_Chr5g0434841	52.830	106	50	0	11	116	19	124	1.20e-35	131
Msa0242540	MtrunA17_Chr7g0247131	68.493	73	23	0	44	116	10	82	2.87e-35	129
Msa0242540	MtrunA17_Chr8g0360111	53.922	102	47	0	11	112	24	125	2.96e-35	128
Msa0242540	MtrunA17_Chr1g0154031	53.846	104	48	0	12	115	76	179	4.90e-35	131
Msa0242540	MtrunA17_Chr2g0293911	56.075	107	47	0	8	114	20	126	1.92e-34	128
Msa0242540	MtrunA17_Chr4g0068921	56.075	107	47	0	8	114	20	126	2.04e-34	124
Msa0242540	MtrunA17_Chr1g0180391	54.286	105	48	0	12	116	19	123	3.23e-34	125
Msa0242540	MtrunA17_Chr4g0030881	51.818	110	46	1	13	115	8	117	4.30e-34	125
Msa0242540	MtrunA17_Chr5g0395221	59.091	88	36	0	1	88	1	88	2.26e-31	113
Msa0242540	MtrunA17_Chr2g0323321	59.783	92	36	1	1	92	1	91	4.99e-31	113
Msa0242540	MtrunA17_Chr5g0440781	40.141	142	79	2	13	153	13	149	1.32e-30	114
Msa0242540	MtrunA17_Chr5g0441141	40.141	142	79	2	13	153	13	149	1.05e-29	114
Msa0242540	MtrunA17_Chr5g0440761	40.141	142	79	2	13	153	13	149	1.09e-29	114
Msa0242540	MtrunA17_Chr8g0342511	56.322	87	38	0	1	87	1	87	1.72e-29	108
Msa0242540	MtrunA17_Chr5g0441131	37.267	161	87	3	10	161	7	162	2.34e-29	110
Msa0242540	MtrunA17_Chr8g0342531	56.180	89	39	0	1	89	1	89	1.10e-28	108
Msa0242540	MtrunA17_Chr4g0013361	40.288	139	79	3	8	144	6	142	1.78e-28	111
Msa0242540	MtrunA17_Chr4g0053431	35.204	196	110	5	14	204	5	188	2.67e-28	110
Msa0242540	MtrunA17_Chr3g0099141	54.023	87	40	0	8	94	36	122	1.60e-27	104
Msa0242540	MtrunA17_Chr5g0401731	43.651	126	70	1	14	139	15	139	1.76e-27	109
Msa0242540	MtrunA17_Chr3g0133601	49.524	105	52	1	14	118	37	140	2.00e-27	107
Msa0242540	MtrunA17_Chr8g0334881	46.154	104	55	1	12	114	10	113	2.41e-27	108
Msa0242540	MtrunA17_Chr4g0008551	52.427	103	46	2	14	115	38	138	4.60e-27	108
Msa0242540	MtrunA17_Chr8g0342461	53.333	90	41	1	1	89	1	90	5.38e-27	103
Msa0242540	MtrunA17_Chr8g0342471	53.333	90	41	1	1	89	1	90	7.93e-27	102
Msa0242540	MtrunA17_Chr5g0429661	50.000	104	51	1	12	115	120	222	5.82e-26	105
Msa0242540	MtrunA17_Chr7g0229131	43.137	102	58	0	44	145	4	105	1.69e-25	100
Msa0242540	MtrunA17_Chr7g0229101	61.429	70	27	0	44	113	4	73	8.47e-25	99.4
Msa0242540	MtrunA17_Chr6g0454921	46.078	102	54	1	14	115	15	115	9.32e-25	99.4
Msa0242540	MtrunA17_Chr5g0437321	47.475	99	51	1	14	112	19	116	6.18e-24	99.0
Msa0242540	MtrunA17_Chr4g0058991	30.290	241	117	9	8	215	203	425	2.42e-23	99.8
Msa0242540	MtrunA17_Chr3g0117511	29.500	200	121	4	8	191	177	372	3.18e-23	99.4
Msa0242540	MtrunA17_Chr5g0434901	57.576	66	28	0	48	113	9	74	2.50e-22	90.1
Msa0242540	MtrunA17_Chr7g0238631	39.831	118	70	1	12	129	111	227	3.59e-21	94.0
Msa0242540	MtrunA17_Chr3g0093811	52.055	73	35	0	44	116	14	86	4.77e-21	90.9
Msa0242540	MtrunA17_Chr6g0480581	40.187	107	60	2	14	117	4	109	8.45e-21	89.4
Msa0242540	MtrunA17_Chr5g0425591	47.059	85	44	1	10	93	7	91	3.01e-20	84.0
Msa0242540	MtrunA17_Chr3g0139671	36.937	111	69	1	12	122	83	192	5.26e-20	90.9
Msa0242540	MtrunA17_Chr6g0453751	46.739	92	40	2	11	93	19	110	8.43e-20	84.0
Msa0242540	MtrunA17_Chr6g0460661	37.273	110	68	1	14	123	16	124	1.18e-19	84.3
Msa0242540	MtrunA17_Chr7g0228531	39.623	106	62	2	10	115	216	319	3.52e-19	87.4
Msa0242540	MtrunA17_Chr4g0042501	40.196	102	60	1	14	115	105	205	4.26e-19	87.4
Msa0242540	MtrunA17_Chr1g0157731	35.135	111	71	1	12	122	89	198	4.94e-19	87.8
Msa0242540	MtrunA17_Chr5g0417621	39.216	102	61	1	14	115	134	234	1.04e-18	86.3
Msa0242540	MtrunA17_Chr7g0238651	34.167	120	77	1	14	131	7	126	2.01e-18	84.7
Msa0242540	MtrunA17_Chr5g0397841	42.857	98	55	1	12	109	108	204	4.49e-18	84.7
Msa0242540	MtrunA17_Chr7g0233061	38.679	106	50	3	14	113	180	276	9.84e-18	82.8
Msa0242540	MtrunA17_Chr7g0228481	38.462	104	62	2	10	113	216	317	5.92e-17	81.3
Msa0242540	MtrunA17_Chr3g0125801	40.196	102	60	1	14	115	16	116	6.73e-17	79.7
Msa0242540	MtrunA17_Chr6g0460671	29.412	153	106	2	14	165	99	250	7.17e-17	80.1
Msa0242540	MtrunA17_Chr5g0416341	37.374	99	61	1	17	115	29	126	3.56e-16	79.0
Msa0242540	MtrunA17_Chr1g0177901	50.000	66	33	0	48	113	27	92	4.82e-16	75.9
Msa0242540	MtrunA17_Chr7g0247141	68.750	48	14	1	1	47	1	48	8.11e-16	70.9
Msa0242540	MtrunA17_Chr7g0228401	50.000	66	33	0	48	113	312	377	1.11e-15	77.4
Msa0242540	MtrunA17_Chr7g0254261	37.255	102	63	1	14	115	89	189	2.18e-15	75.9
Msa0242540	MtrunA17_Chr5g0434871	58.140	43	18	0	74	116	2	44	4.87e-15	68.9
Msa0242540	MtrunA17_Chr8g0362231	36.364	99	61	2	17	114	25	122	4.02e-14	72.8
Msa0242540	MtrunA17_Chr1g0193901	50.000	58	28	1	12	68	11	68	2.37e-13	65.5
Msa0242540	MtrunA17_Chr1g0193891	50.000	58	28	1	12	68	11	68	2.37e-13	65.5
Msa0242540	MtrunA17_Chr1g0193871	50.000	58	28	1	12	68	11	68	2.37e-13	65.5
Msa0242540	MtrunA17_Chr1g0193881	50.000	58	28	1	12	68	11	68	2.37e-13	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0242540	AT5G49330.1	52.632	228	95	2	1	228	1	215	2.63e-73	230
Msa0242540	AT2G47460.1	72.857	140	36	1	1	138	1	140	6.32e-70	222
Msa0242540	AT3G62610.1	78.512	121	26	0	1	121	1	121	7.05e-68	216
Msa0242540	AT4G09460.1	65.909	132	39	1	1	126	1	132	6.08e-59	189
Msa0242540	AT1G06180.1	69.231	117	36	0	1	117	1	117	7.97e-59	189
Msa0242540	AT1G35515.1	71.552	116	33	0	1	116	1	116	1.08e-58	188
Msa0242540	AT3G61250.1	67.241	116	38	0	1	116	1	116	3.27e-58	189
Msa0242540	AT2G31180.1	50.526	190	77	3	1	185	1	178	1.05e-57	187
Msa0242540	AT4G38620.1	57.407	162	57	2	1	150	1	162	1.10e-57	187
Msa0242540	AT1G22640.1	55.921	152	57	2	1	152	1	142	1.16e-57	187
Msa0242540	AT2G16720.1	57.237	152	55	2	1	152	1	142	1.35e-57	187
Msa0242540	AT5G15310.4	68.966	116	36	0	1	116	1	116	1.40e-57	186
Msa0242540	AT5G15310.1	68.966	116	36	0	1	116	1	116	2.18e-57	188
Msa0242540	AT4G21440.1	58.108	148	62	0	1	148	1	148	2.20e-57	189
Msa0242540	AT3G02940.2	68.103	116	37	0	1	116	1	116	2.20e-57	188
Msa0242540	AT5G15310.2	68.966	116	36	0	1	116	1	116	3.04e-57	187
Msa0242540	AT4G28110.1	68.103	116	37	0	1	116	1	116	3.75e-57	186
Msa0242540	AT3G02940.1	68.103	116	37	0	1	116	1	116	4.21e-57	187
Msa0242540	AT3G02940.3	68.103	116	37	0	1	116	1	116	4.21e-57	187
Msa0242540	AT3G01140.2	68.966	116	36	0	1	116	1	116	4.21e-57	188
Msa0242540	AT3G23250.1	66.379	116	39	0	1	116	1	116	1.45e-56	185
Msa0242540	AT5G16770.4	68.103	116	37	0	1	116	1	116	2.24e-56	186
Msa0242540	AT5G16770.3	68.103	116	37	0	1	116	1	116	2.24e-56	186
Msa0242540	AT5G16770.1	68.103	116	37	0	1	116	1	116	5.03e-56	185
Msa0242540	AT5G16770.2	68.103	116	37	0	1	116	1	116	5.03e-56	185
Msa0242540	AT3G13540.1	68.142	113	36	0	4	116	15	127	1.51e-55	181
Msa0242540	AT4G34990.1	59.028	144	53	1	1	138	1	144	2.29e-55	181
Msa0242540	AT4G05100.1	68.376	117	36	1	1	116	1	117	6.58e-55	182
Msa0242540	AT1G08810.1	50.282	177	82	3	1	174	1	174	8.06e-55	180
Msa0242540	AT1G34670.1	67.241	116	38	0	1	116	1	116	9.50e-55	182
Msa0242540	AT1G66230.1	67.241	116	38	0	1	116	1	116	1.89e-54	179
Msa0242540	AT5G16600.1	68.966	116	36	0	1	116	1	116	2.14e-54	181
Msa0242540	AT3G01140.1	68.142	113	36	0	4	116	47	159	6.74e-54	181
Msa0242540	AT5G62470.2	62.698	126	43	1	1	126	1	122	1.87e-53	179
Msa0242540	AT4G17785.2	56.863	153	57	3	1	144	1	153	7.46e-53	177
Msa0242540	AT5G10280.1	63.793	116	42	0	1	116	1	116	8.48e-53	177
Msa0242540	AT5G65230.1	66.379	116	39	0	1	116	1	116	9.13e-53	176
Msa0242540	AT4G17785.1	56.863	153	57	3	1	144	1	153	1.08e-52	177
Msa0242540	AT5G07690.1	67.544	114	37	0	1	114	1	114	2.71e-52	175
Msa0242540	AT3G47600.1	62.931	116	43	0	1	116	1	116	4.10e-52	175
Msa0242540	AT5G62470.1	62.698	126	42	2	1	126	1	121	5.46e-52	175
Msa0242540	AT1G16490.1	64.348	115	41	0	2	116	4	118	8.92e-52	172
Msa0242540	AT1G74650.1	63.793	116	42	0	1	116	1	116	9.70e-52	174
Msa0242540	AT5G61420.2	64.655	116	41	0	1	116	1	116	1.03e-51	175
Msa0242540	AT4G12350.1	64.655	116	41	0	1	116	1	116	1.53e-51	172
Msa0242540	AT4G22680.1	56.028	141	56	1	1	135	1	141	1.87e-51	171
Msa0242540	AT5G56110.1	53.741	147	67	1	1	146	1	147	2.00e-51	172
Msa0242540	AT5G60890.1	62.931	116	43	0	1	116	1	116	2.52e-51	172
Msa0242540	AT1G79180.1	52.632	152	68	1	2	153	4	151	5.08e-51	171
Msa0242540	AT3G28910.1	63.793	116	42	0	1	116	1	116	8.03e-51	171
Msa0242540	AT1G56160.1	63.478	115	42	0	2	116	4	118	1.02e-49	167
Msa0242540	AT5G14340.1	63.793	116	42	0	1	116	13	128	1.23e-49	167
Msa0242540	AT5G07700.1	62.931	116	43	0	1	116	1	116	3.36e-49	167
Msa0242540	AT5G07700.2	62.931	116	43	0	1	116	1	116	3.36e-49	167
Msa0242540	AT1G18570.1	63.248	117	42	1	1	116	1	117	4.31e-49	167
Msa0242540	AT1G09540.1	65.517	116	40	0	1	116	1	116	9.59e-49	167
Msa0242540	AT1G74080.1	63.158	114	42	0	1	114	1	114	1.66e-48	166
Msa0242540	AT3G13890.2	48.125	160	83	0	1	160	1	160	2.04e-48	166
Msa0242540	AT1G63910.1	62.069	116	44	0	1	116	1	116	5.55e-48	165
Msa0242540	AT5G54230.1	46.067	178	96	0	1	178	1	178	5.59e-48	164
Msa0242540	AT5G26660.1	63.793	116	42	0	1	116	1	116	6.11e-48	164
Msa0242540	AT4G01680.3	64.655	116	41	0	1	116	1	116	9.08e-48	160
Msa0242540	AT4G01680.1	64.655	116	41	0	1	116	1	116	2.42e-47	162
Msa0242540	AT5G23000.1	60.684	117	45	1	1	116	1	117	5.35e-47	161
Msa0242540	AT1G57560.1	62.931	116	43	0	1	116	1	116	7.12e-47	160
Msa0242540	AT2G36890.1	56.154	130	51	2	1	129	1	125	7.23e-47	160
Msa0242540	AT1G57560.2	62.931	116	43	0	1	116	1	116	8.77e-47	159
Msa0242540	AT2G36890.2	56.154	130	51	2	1	129	42	166	1.03e-46	161
Msa0242540	AT5G40330.1	51.471	136	59	1	13	141	13	148	1.99e-46	157
Msa0242540	AT5G14750.1	44.086	186	91	2	13	185	17	202	4.04e-46	155
Msa0242540	AT3G12820.1	59.649	114	46	0	3	116	5	118	9.94e-46	155
Msa0242540	AT5G35550.1	66.667	105	35	0	12	116	14	118	1.58e-45	155
Msa0242540	AT3G13890.1	45.562	169	83	1	1	160	1	169	1.83e-45	158
Msa0242540	AT5G62320.1	58.197	122	44	1	2	116	3	124	1.96e-45	155
Msa0242540	AT5G65790.1	58.974	117	47	1	1	116	1	117	2.40e-45	158
Msa0242540	AT5G57620.1	56.000	125	54	1	1	124	1	125	2.68e-45	157
Msa0242540	AT4G37780.1	56.410	117	50	1	1	116	1	117	3.90e-45	156
Msa0242540	AT3G49690.1	58.974	117	47	1	1	116	1	117	3.97e-45	156
Msa0242540	AT1G74430.1	59.483	116	47	0	1	116	1	116	8.32e-45	154
Msa0242540	AT3G24310.1	64.762	105	37	0	11	115	17	121	1.77e-44	153
Msa0242540	AT1G79180.2	43.243	185	68	2	2	153	4	184	3.32e-44	154
Msa0242540	AT4G01680.2	58.594	128	41	1	1	116	1	128	7.36e-44	154
Msa0242540	AT4G13480.1	65.049	103	36	0	13	115	7	109	1.46e-43	150
Msa0242540	AT2G32460.1	61.111	108	42	0	8	115	14	121	1.61e-43	156
Msa0242540	AT3G12720.1	57.143	112	48	0	6	117	16	127	2.10e-43	151
Msa0242540	AT2G32460.2	61.905	105	40	0	11	115	5	109	2.27e-43	155
Msa0242540	AT1G18710.1	57.759	116	49	0	1	116	1	116	2.74e-43	150
Msa0242540	AT3G08500.1	61.111	108	42	0	9	116	27	134	3.03e-43	152
Msa0242540	AT5G12870.1	60.952	105	41	0	12	116	18	122	3.24e-43	150
Msa0242540	AT3G28470.1	58.182	110	46	0	1	110	1	110	3.45e-43	151
Msa0242540	AT3G27920.1	50.382	131	58	1	13	136	15	145	6.89e-43	147
Msa0242540	AT3G27810.1	62.857	105	39	0	12	116	20	124	1.16e-42	147
Msa0242540	AT5G40350.1	62.857	105	39	0	12	116	17	121	2.14e-42	146
Msa0242540	AT3G01530.1	42.105	171	99	0	8	178	21	191	2.81e-42	145
Msa0242540	AT5G52600.1	57.692	104	44	0	12	115	12	115	1.58e-41	143
Msa0242540	AT1G25340.1	58.252	103	43	0	13	115	19	121	1.36e-40	143
Msa0242540	AT3G30210.1	59.615	104	42	0	11	114	26	129	1.67e-40	143
Msa0242540	AT5G55020.1	58.879	107	44	0	10	116	24	130	1.73e-40	148
Msa0242540	AT5G06100.1	58.095	105	44	0	11	115	31	135	1.80e-40	147
Msa0242540	AT1G68320.1	58.654	104	43	0	12	115	19	122	2.19e-40	143
Msa0242540	AT5G06100.5	58.095	105	44	0	11	115	31	135	6.07e-40	147
Msa0242540	AT5G06100.2	58.095	105	44	0	11	115	31	135	6.07e-40	147
Msa0242540	AT5G06100.3	58.095	105	44	0	11	115	31	135	6.07e-40	147
Msa0242540	AT5G06100.4	58.095	105	44	0	11	115	31	135	6.07e-40	147
Msa0242540	AT3G11440.2	58.654	104	43	0	12	115	41	144	6.69e-40	146
Msa0242540	AT3G11440.3	58.654	104	43	0	12	115	41	144	2.58e-39	145
Msa0242540	AT3G11440.4	58.654	104	43	0	12	115	41	144	2.58e-39	145
Msa0242540	AT3G11440.1	58.654	104	43	0	12	115	41	144	2.58e-39	145
Msa0242540	AT4G26930.1	56.190	105	46	0	10	114	17	121	4.39e-39	142
Msa0242540	AT1G48000.1	58.095	105	44	0	10	114	30	134	4.94e-38	135
Msa0242540	AT1G66370.1	53.043	115	50	1	1	115	1	111	6.33e-38	135
Msa0242540	AT2G47190.1	53.704	108	50	0	8	115	16	123	1.25e-37	135
Msa0242540	AT3G46130.1	55.238	105	47	0	11	115	8	112	6.47e-37	133
Msa0242540	AT5G59780.3	55.340	103	46	0	13	115	9	111	7.53e-37	132
Msa0242540	AT4G25560.1	60.194	103	41	0	13	115	11	113	1.31e-36	133
Msa0242540	AT1G25340.2	55.340	103	41	1	13	115	19	116	3.47e-36	132
Msa0242540	AT1G25340.3	55.340	103	41	1	13	115	19	116	6.61e-36	132
Msa0242540	AT3G06490.1	59.813	107	43	0	8	114	15	121	1.21e-35	131
Msa0242540	AT2G26960.1	51.887	106	51	0	9	114	17	122	2.23e-35	133
Msa0242540	AT1G66380.1	58.095	105	44	0	11	115	7	111	7.55e-35	124
Msa0242540	AT5G52260.1	59.223	103	42	0	13	115	13	115	1.47e-34	127
Msa0242540	AT1G56650.1	57.143	105	45	0	11	115	7	111	4.58e-34	125
Msa0242540	AT3G48920.1	51.923	104	50	0	13	116	19	122	5.95e-34	125
Msa0242540	AT1G66390.1	58.095	105	44	0	11	115	7	111	6.99e-34	125
Msa0242540	AT3G53200.1	56.731	104	45	0	12	115	9	112	7.08e-33	122
Msa0242540	AT5G49620.1	56.075	107	47	0	8	114	22	128	1.10e-32	123
Msa0242540	AT5G14750.3	62.821	78	26	1	39	116	12	86	1.95e-31	116
Msa0242540	AT2G26950.1	48.113	106	55	0	9	114	13	118	2.21e-31	121
Msa0242540	AT5G35550.2	72.222	72	20	0	45	116	50	121	4.05e-31	118
Msa0242540	AT5G26660.2	70.270	74	22	0	43	116	12	85	7.39e-31	119
Msa0242540	AT3G27810.2	68.056	72	23	0	45	116	4	75	4.19e-30	113
Msa0242540	AT3G47600.2	66.667	72	24	0	45	116	39	110	1.22e-29	115
Msa0242540	AT5G40350.2	66.667	72	24	0	45	116	5	76	3.56e-29	110
Msa0242540	AT5G49620.2	49.587	121	47	1	8	114	22	142	4.73e-29	114
Msa0242540	AT3G60460.1	45.872	109	58	1	7	114	6	114	2.03e-28	112
Msa0242540	AT5G59780.2	63.014	73	27	0	43	115	18	90	6.59e-28	108
Msa0242540	AT3G12820.2	64.286	70	25	0	47	116	1	70	8.21e-28	107
Msa0242540	AT3G46130.3	63.889	72	26	0	44	115	9	80	1.28e-27	107
Msa0242540	AT3G46130.4	63.014	73	27	0	43	115	18	90	2.02e-27	107
Msa0242540	AT3G09230.1	45.946	111	59	1	14	124	55	164	5.63e-27	109
Msa0242540	AT3G53200.2	64.384	73	26	0	43	115	7	79	1.11e-26	104
Msa0242540	AT2G39880.1	53.398	103	45	2	14	115	50	150	7.90e-26	106
Msa0242540	AT3G55730.1	50.485	103	48	2	14	115	56	156	3.57e-25	104
Msa0242540	AT4G18770.1	37.500	144	84	3	8	149	211	350	5.48e-25	104
Msa0242540	AT5G58850.1	47.115	104	54	1	12	115	103	205	8.43e-25	103
Msa0242540	AT4G37260.1	46.078	102	54	1	14	115	13	113	3.33e-23	98.2
Msa0242540	AT1G22640.3	47.368	95	40	2	58	152	1	85	3.47e-23	95.5
Msa0242540	AT3G27785.1	43.119	109	61	1	7	115	182	289	3.80e-23	99.4
Msa0242540	AT5G11050.1	45.098	102	55	1	14	115	105	205	5.04e-23	99.0
Msa0242540	AT3G50060.1	47.059	102	53	1	14	115	6	106	1.23e-22	96.3
Msa0242540	AT2G23290.1	45.098	102	55	1	14	115	13	113	1.37e-22	96.3
Msa0242540	AT5G40360.1	40.777	103	60	1	12	114	156	257	1.74e-22	96.7
Msa0242540	AT5G67300.1	29.412	221	120	5	14	202	6	222	3.72e-22	94.7
Msa0242540	AT5G02320.1	40.171	117	69	1	12	128	125	240	5.18e-22	96.7
Msa0242540	AT5G02320.2	40.171	117	69	1	12	128	125	240	5.18e-22	96.7
Msa0242540	AT5G02320.3	40.171	117	69	1	12	128	65	180	6.47e-22	96.3
Msa0242540	AT1G66380.3	59.722	72	29	0	44	115	7	78	9.15e-22	88.6
Msa0242540	AT5G14750.4	59.322	59	24	0	58	116	1	59	2.41e-21	88.6
Msa0242540	AT5G14750.2	59.322	59	24	0	58	116	1	59	2.41e-21	88.6
Msa0242540	AT1G18960.1	39.806	103	59	2	14	116	10	109	2.42e-21	92.8
Msa0242540	AT5G11510.3	39.130	115	61	2	12	122	79	188	3.32e-21	94.7
Msa0242540	AT5G11510.1	39.130	115	61	2	12	122	79	188	3.32e-21	94.7
Msa0242540	AT5G11510.4	39.130	115	61	2	12	122	79	188	3.32e-21	94.7
Msa0242540	AT3G23250.2	59.322	59	24	0	58	116	1	59	4.07e-21	90.5
Msa0242540	AT5G11510.5	39.130	115	61	2	12	122	79	188	5.78e-21	94.0
Msa0242540	AT5G11510.2	39.130	115	61	2	12	122	79	188	5.97e-21	94.0
Msa0242540	AT1G17950.1	42.157	102	58	1	14	115	5	105	5.97e-21	90.5
Msa0242540	AT1G66380.2	52.381	84	40	0	11	94	7	90	7.60e-21	86.3
Msa0242540	AT1G71030.2	57.576	66	28	0	51	116	5	70	2.45e-20	87.0
Msa0242540	AT1G71030.1	57.576	66	28	0	51	116	19	84	2.66e-20	87.4
Msa0242540	AT3G09370.2	38.462	117	71	1	12	128	133	248	2.81e-20	91.7
Msa0242540	AT3G09370.1	38.462	117	71	1	12	128	128	243	3.07e-20	91.7
Msa0242540	AT3G09370.3	38.462	117	71	1	12	128	141	256	3.46e-20	91.3
Msa0242540	AT5G17800.1	34.783	138	84	2	14	146	93	229	1.02e-19	88.6
Msa0242540	AT1G69560.1	37.963	108	66	1	9	116	102	208	1.20e-19	88.2
Msa0242540	AT1G69560.2	37.963	108	66	1	9	116	118	224	1.32e-19	88.6
Msa0242540	AT2G25230.1	39.815	108	64	1	7	114	19	125	3.29e-19	85.5
Msa0242540	AT4G33450.1	37.168	113	65	2	3	115	13	119	7.28e-19	84.7
Msa0242540	AT1G73410.1	42.157	102	58	1	14	115	6	106	1.62e-18	83.6
Msa0242540	AT1G73410.2	42.157	102	58	1	14	115	6	106	2.14e-18	82.4
Msa0242540	AT4G32730.1	35.135	111	71	1	12	122	85	194	2.50e-18	86.3
Msa0242540	AT4G32730.5	35.135	111	71	1	12	122	85	194	2.67e-18	86.3
Msa0242540	AT4G32730.4	35.135	111	71	1	12	122	85	194	2.67e-18	86.3
Msa0242540	AT4G32730.3	35.135	111	71	1	12	122	85	194	2.67e-18	86.3
Msa0242540	AT4G32730.2	35.135	111	71	1	12	122	85	194	2.67e-18	86.3
Msa0242540	AT1G26780.2	39.423	104	62	1	12	115	96	198	2.69e-18	84.7
Msa0242540	AT1G26780.1	39.423	104	62	1	12	115	96	198	4.22e-18	83.2
Msa0242540	AT3G29020.2	34.161	161	97	4	14	171	67	221	7.76e-17	80.1
Msa0242540	AT2G37630.1	34.694	98	62	1	13	108	3	100	2.17e-16	79.3
Msa0242540	AT3G29020.1	36.893	103	64	1	14	116	65	166	2.29e-16	77.4
Msa0242540	AT4G00540.2	37.500	112	66	2	11	119	100	210	2.31e-16	79.7
Msa0242540	AT4G00540.1	37.500	112	66	2	11	119	98	208	3.58e-16	79.3
Msa0242540	AT5G39700.1	37.255	102	63	1	15	116	57	157	5.90e-16	75.5
Msa0242540	AT5G40430.1	33.898	118	76	1	7	124	47	162	1.11e-15	75.9
Msa0242540	AT1G14350.2	37.374	99	61	1	17	115	28	125	1.50e-15	77.4
Msa0242540	AT1G14350.1	37.374	99	61	1	17	115	28	125	1.50e-15	77.4
Msa0242540	AT2G02820.3	36.364	99	62	1	17	115	33	130	2.67e-15	75.9
Msa0242540	AT2G02820.2	36.364	99	62	1	17	115	33	130	3.61e-15	76.3
Msa0242540	AT2G02820.1	36.364	99	62	1	17	115	33	130	3.61e-15	76.3
Msa0242540	AT5G59780.1	63.043	46	17	0	70	115	1	46	5.19e-15	72.4
Msa0242540	AT4G25560.2	67.391	46	15	0	70	115	2	47	1.46e-14	72.0
Msa0242540	AT3G46130.2	63.043	46	17	0	70	115	1	46	1.65e-14	71.2
Msa0242540	AT3G28910.2	67.500	40	13	0	77	116	1	40	6.00e-13	68.2
Msa0242540	AT1G74650.3	60.465	43	17	0	77	119	1	43	6.18e-13	68.2
Msa0242540	AT5G61420.1	72.222	36	10	0	81	116	2	37	2.94e-12	66.6

Find 77 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCTATACTAATGGCTTATTT+TGG	0.181363	2_2:-18789755	None:intergenic
TATAAATTACCTGCTTTCTT+AGG	0.244579	2_2:-18789900	None:intergenic
GGGTGGTGGAGACTCGTTTA+TGG	0.268230	2_2:-18792368	None:intergenic
TAATTAGTTGTTTGAATTGC+AGG	0.280833	2_2:+18792968	Msa0242540:three_prime_UTR
GTCAAGTTGCATGCTGTTCT+TGG	0.300226	2_2:+18790110	Msa0242540:CDS
ACTGATTACATCAAACAAAA+TGG	0.313926	2_2:+18789855	Msa0242540:CDS
TTTCCCTTGATTAATTGCTT+TGG	0.314214	2_2:-18792410	None:intergenic
AAAGATGCATGTGGGGATAA+TGG	0.326959	2_2:+18792741	Msa0242540:CDS
TCATCATCTAGCCATTTATA+TGG	0.328544	2_2:-18792652	None:intergenic
CTATTGTCTTCTTCTATGCT+TGG	0.334263	2_2:-18792442	None:intergenic
AACAAAATGGTGAAGGATCT+TGG	0.342359	2_2:+18789868	Msa0242540:CDS
CTTCCCATTGGCTATACTAA+TGG	0.345174	2_2:-18789765	None:intergenic
GGGGATAATGGAAACAAATA+AGG	0.354793	2_2:+18792753	Msa0242540:CDS
GTCTCCACCACCCCTTGATA+TGG	0.365900	2_2:+18792378	Msa0242540:CDS
ATTGAATATTGATGAGGGTT+TGG	0.371754	2_2:+18792627	Msa0242540:CDS
TTGAATATTGATGAGGGTTT+GGG	0.380724	2_2:+18792628	Msa0242540:CDS
ATTTGTGGCTCATCATATAA+TGG	0.388625	2_2:+18792790	Msa0242540:CDS
CCCACAAGCAAGTCTTCATT+TGG	0.393338	2_2:-18792903	None:intergenic
ATAATGAGATAAAGAACTAT+TGG	0.401279	2_2:+18792305	Msa0242540:CDS
ATTATGATCAGTTGTCTGAT+TGG	0.412238	2_2:+18792863	Msa0242540:CDS
CTCCTTGTTGTGAAAAGGTT+GGG	0.417007	2_2:+18789790	Msa0242540:CDS
AGGGTTTGGGACCATATAAA+TGG	0.422279	2_2:+18792641	Msa0242540:CDS
TTTCTTTAGGCATTGGTTCA+AGG	0.441266	2_2:-18792486	None:intergenic
TTATGATCAGTTGTCTGATT+GGG	0.447767	2_2:+18792864	Msa0242540:CDS
TGCATGCTGTTCTTGGAAAT+AGG	0.449023	2_2:+18790117	Msa0242540:CDS
TGATATATGAAGGTTTGTTA+AGG	0.450521	2_2:+18789997	Msa0242540:intron
TGCTTGTGGGGTCCAGGCAT+TGG	0.457725	2_2:+18792916	Msa0242540:CDS
TTCTTTAGGCATTGGTTCAA+GGG	0.459777	2_2:-18792485	None:intergenic
AATGAATTGAATATTGATGA+GGG	0.462618	2_2:+18792622	Msa0242540:CDS
AAGACTTGCTTGTGGGGTCC+AGG	0.468518	2_2:+18792910	Msa0242540:CDS
GAAAAGGTTGGGTTGAAGAA+AGG	0.473777	2_2:+18789801	Msa0242540:CDS
GAATAATATTTATGAAATGA+AGG	0.480192	2_2:+18792561	Msa0242540:CDS
CCAAATGAAGACTTGCTTGT+GGG	0.483699	2_2:+18792903	Msa0242540:CDS
ACATCCAAAGCAATTAATCA+AGG	0.485763	2_2:+18792406	Msa0242540:CDS
ATCTCATTATCTGTTCGTCC+TGG	0.494018	2_2:-18792292	None:intergenic
TTCATGATTTCACCAATGCC+TGG	0.500438	2_2:-18792928	None:intergenic
GGCATTGGTGAAATCATGAA+TGG	0.500573	2_2:+18792931	Msa0242540:CDS
TGGATGTAGATGCCATATCA+AGG	0.504399	2_2:-18792390	None:intergenic
TATAATGGAGAGAGTGGAGA+AGG	0.506418	2_2:+18792805	Msa0242540:CDS
CAATGATTTCTTCCTCATGA+GGG	0.513229	2_2:-18790088	None:intergenic
ACAATGATTTCTTCCTCATG+AGG	0.520735	2_2:-18790089	None:intergenic
GGAAGAGTTGTAGACTAAGA+TGG	0.521666	2_2:+18790024	Msa0242540:CDS
ATGAAGGTTTGTTAAGGTGT+GGG	0.523398	2_2:+18790003	Msa0242540:intron
GCTCCTTGTTGTGAAAAGGT+TGG	0.525062	2_2:+18789789	Msa0242540:CDS
TATGAAGGTTTGTTAAGGTG+TGG	0.532696	2_2:+18790002	Msa0242540:intron
CAACAAGGAGCTCTTCCCAT+TGG	0.535780	2_2:-18789777	None:intergenic
AAGAGCTCCTTGTTGTGAAA+AGG	0.539664	2_2:+18789785	Msa0242540:CDS
AAATGAATTGAATATTGATG+AGG	0.544069	2_2:+18792621	Msa0242540:CDS
AAGCCATTAGTATAGCCAAT+GGG	0.554512	2_2:+18789762	Msa0242540:exon
AGGAAGATGGACTGCTGAAG+AGG	0.556652	2_2:+18789821	Msa0242540:CDS
AATAATATTTATGAAATGAA+GGG	0.558223	2_2:+18792562	Msa0242540:CDS
TTGGGTTGAAGAAAGGAAGA+TGG	0.559220	2_2:+18789808	Msa0242540:CDS
ATTGGAACTCTCATTTGAGA+AGG	0.563317	2_2:+18792323	Msa0242540:CDS
TACATCAAACAAAATGGTGA+AGG	0.566927	2_2:+18789861	Msa0242540:CDS
TAAGCCATTAGTATAGCCAA+TGG	0.578012	2_2:+18789761	Msa0242540:exon
GATGCCATATCAAGGGGTGG+TGG	0.580470	2_2:-18792382	None:intergenic
GGATGTAGATGCCATATCAA+GGG	0.582178	2_2:-18792389	None:intergenic
CAAATGAAGACTTGCTTGTG+GGG	0.583434	2_2:+18792904	Msa0242540:CDS
CATCCAAAGCAATTAATCAA+GGG	0.597288	2_2:+18792407	Msa0242540:CDS
ACATATCTTTCCAAGATGCA+AGG	0.602459	2_2:-18793044	None:intergenic
GAAATGAAAAGTGAAATTTG+TGG	0.604467	2_2:+18792775	Msa0242540:CDS
GTGATAGCATCACATTTACC+AGG	0.608146	2_2:+18792274	Msa0242540:CDS
TCACAATACTATAATGTACA+AGG	0.616095	2_2:+18792517	Msa0242540:CDS
GACTTTAGAAAGATGCATGT+GGG	0.616750	2_2:+18792733	Msa0242540:CDS
TCATCATATAATGGAGAGAG+TGG	0.620420	2_2:+18792799	Msa0242540:CDS
AATGATTTCTTCCTCATGAG+GGG	0.620652	2_2:-18790087	None:intergenic
TTGAGAGCAGATGTGAAGAG+AGG	0.626478	2_2:+18790056	Msa0242540:CDS
CATAGAAGAAGACAATAGCA+TGG	0.634357	2_2:+18792447	Msa0242540:CDS
AAAATGGTGAAGGATCTTGG+AGG	0.644525	2_2:+18789871	Msa0242540:CDS
ACCAAATGAAGACTTGCTTG+TGG	0.648427	2_2:+18792902	Msa0242540:CDS
AGGAAACATATCCCCTCATG+AGG	0.649776	2_2:+18790076	Msa0242540:CDS
GATGTAGATGCCATATCAAG+GGG	0.659513	2_2:-18792388	None:intergenic
AGACAACTGATCATAATCTG+TGG	0.681864	2_2:-18792857	None:intergenic
ATAATGGAGAGAGTGGAGAA+GGG	0.683863	2_2:+18792806	Msa0242540:CDS
TGACTTTAGAAAGATGCATG+TGG	0.684347	2_2:+18792732	Msa0242540:CDS
GTAGATGCCATATCAAGGGG+TGG	0.684370	2_2:-18792385	None:intergenic
ACTTTAGAAAGATGCATGTG+GGG	0.708042	2_2:+18792734	Msa0242540:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTAATTTATGATATATGA+AGG	+	chr2_2:18789987-18790006	Msa0242540:intron	10.0%
!!!	TAAACAAAAACAATATTTTT+TGG	-	chr2_2:18790865-18790884	None:intergenic	10.0%
!!!	TTTTTGTTTATAAATATGAT+CGG	+	chr2_2:18790875-18790894	Msa0242540:intron	10.0%
!!!	TATTAATTTGTTTGAATAAA+TGG	+	chr2_2:18791609-18791628	Msa0242540:intron	10.0%
!!	TAATTAATTATGAAATTGTT+TGG	+	chr2_2:18792236-18792255	Msa0242540:intron	10.0%
!!	AATAATATTTATGAAATGAA+GGG	+	chr2_2:18792562-18792581	Msa0242540:CDS	10.0%
!!	TTATCATAACTATAAAATGA+AGG	+	chr2_2:18790296-18790315	Msa0242540:intron	15.0%
!!	TATAAAATGAAGGAAAAAAA+TGG	+	chr2_2:18790306-18790325	Msa0242540:intron	15.0%
!!	GATATAGTTAAATAATCAAA+TGG	+	chr2_2:18790361-18790380	Msa0242540:intron	15.0%
!!	CATTGAATACATAATATATT+TGG	+	chr2_2:18790801-18790820	Msa0242540:intron	15.0%
!!	AAACAATAAAAATGTAATCA+TGG	+	chr2_2:18791155-18791174	Msa0242540:intron	15.0%
!!!	TTTTAAGCACATTTATTTTT+TGG	-	chr2_2:18791576-18791595	None:intergenic	15.0%
!!	AAATAAATGTGCTTAAAAAT+TGG	+	chr2_2:18791578-18791597	Msa0242540:intron	15.0%
!!	AATAAATGTGCTTAAAAATT+GGG	+	chr2_2:18791579-18791598	Msa0242540:intron	15.0%
!!	AGAATGAAATATAAGTAAAT+AGG	+	chr2_2:18791969-18791988	Msa0242540:intron	15.0%
!!	GAATAATATTTATGAAATGA+AGG	+	chr2_2:18792561-18792580	Msa0242540:CDS	15.0%
!!!	TATTCAATTCATTTTTACTA+GGG	-	chr2_2:18792615-18792634	None:intergenic	15.0%
!!!	ATATTCAATTCATTTTTACT+AGG	-	chr2_2:18792616-18792635	None:intergenic	15.0%
!!!	TAACAAACTAATCTTGTTAT+TGG	+	chr2_2:18790262-18790281	Msa0242540:intron	20.0%
!!	AAATAATCAAATGGTACAAT+TGG	+	chr2_2:18790370-18790389	Msa0242540:intron	20.0%
!!!	AATCAATTTTCCATGTAAAA+GGG	-	chr2_2:18790504-18790523	None:intergenic	20.0%
!!!	AAATCAATTTTCCATGTAAA+AGG	-	chr2_2:18790505-18790524	None:intergenic	20.0%
!!	CATTGAATACATAATGTATT+TGG	-	chr2_2:18790839-18790858	None:intergenic	20.0%
!!	AATAAAAATGTAATCATGGA+TGG	+	chr2_2:18791159-18791178	Msa0242540:intron	20.0%
!!	ATAAATGTGCTTAAAAATTG+GGG	+	chr2_2:18791580-18791599	Msa0242540:intron	20.0%
!!	AATGTATAGAGAAAATAGAA+AGG	+	chr2_2:18791671-18791690	Msa0242540:intron	20.0%
!!	ATGTATAGAGAAAATAGAAA+GGG	+	chr2_2:18791672-18791691	Msa0242540:intron	20.0%
!!!	AATTAGTTTTTTTCTCATTG+TGG	-	chr2_2:18791723-18791742	None:intergenic	20.0%
!!	ATTGTATCATATAAACAAAG+TGG	-	chr2_2:18791864-18791883	None:intergenic	20.0%
!!	ATAATGAGATAAAGAACTAT+TGG	+	chr2_2:18792305-18792324	Msa0242540:CDS	20.0%
!!	AAATGAATTGAATATTGATG+AGG	+	chr2_2:18792621-18792640	Msa0242540:CDS	20.0%
!!	AATGAATTGAATATTGATGA+GGG	+	chr2_2:18792622-18792641	Msa0242540:CDS	20.0%
!!!	TTCGTAACATGTTTTTAAAT+GGG	+	chr2_2:18792686-18792705	Msa0242540:CDS	20.0%
!	ACTGATTACATCAAACAAAA+TGG	+	chr2_2:18789855-18789874	Msa0242540:CDS	25.0%
!	TATAAATTACCTGCTTTCTT+AGG	-	chr2_2:18789903-18789922	None:intergenic	25.0%
!!!	TGATATATGAAGGTTTGTTA+AGG	+	chr2_2:18789997-18790016	Msa0242540:intron	25.0%
!	ATATTGAATTGAGAGTAAAG+CGG	+	chr2_2:18790339-18790358	Msa0242540:intron	25.0%
!!	ATCAATTTTCCATGTAAAAG+GGG	-	chr2_2:18790503-18790522	None:intergenic	25.0%
!	ATTCACTATTCAATGTCTTA+AGG	+	chr2_2:18790566-18790585	Msa0242540:intron	25.0%
!	CATATTAAGTGTAGAGAAAT+GGG	-	chr2_2:18790720-18790739	None:intergenic	25.0%
!	ACATATTAAGTGTAGAGAAA+TGG	-	chr2_2:18790721-18790740	None:intergenic	25.0%
!	ATTTCTCTACACTTAATATG+TGG	+	chr2_2:18790720-18790739	Msa0242540:intron	25.0%
!	TTTCTCTACACTTAATATGT+GGG	+	chr2_2:18790721-18790740	Msa0242540:intron	25.0%
!!	TATACTTTTGCTTATAAACG+TGG	-	chr2_2:18790770-18790789	None:intergenic	25.0%
!!!	TGTTATATTCTGAAATAGAC+TGG	-	chr2_2:18790938-18790957	None:intergenic	25.0%
!	AATGTGAGAACATTTATTCT+TGG	-	chr2_2:18791078-18791097	None:intergenic	25.0%
!	CATTGTAATTACTCATTGTT+TGG	+	chr2_2:18791119-18791138	Msa0242540:intron	25.0%
!!	AATTTTCATAGCAAGAGTTT+TGG	-	chr2_2:18791464-18791483	None:intergenic	25.0%
!	TTAAACAAGAAAACGTTTCA+CGG	-	chr2_2:18791521-18791540	None:intergenic	25.0%
!!!	TGAAACGTTTTCTTGTTTAA+AGG	+	chr2_2:18791521-18791540	Msa0242540:intron	25.0%
!!!	TTTTTTGGTATCCTAAAGTT+TGG	-	chr2_2:18791561-18791580	None:intergenic	25.0%
!	TTATCAAATTCAACACTATC+AGG	-	chr2_2:18791892-18791911	None:intergenic	25.0%
!	CTTATATTTCATTCTAGATG+CGG	-	chr2_2:18791964-18791983	None:intergenic	25.0%
!!	TTTTTGTTGATATTTCACTC+TGG	+	chr2_2:18792068-18792087	Msa0242540:intron	25.0%
!	ATGAAATTGTTTGGTTGTAT+AGG	+	chr2_2:18792245-18792264	Msa0242540:intron	25.0%
!!!	TGTGAAGTTGTTTTTTCTTT+AGG	-	chr2_2:18792502-18792521	None:intergenic	25.0%
!	TCACAATACTATAATGTACA+AGG	+	chr2_2:18792517-18792536	Msa0242540:CDS	25.0%
!!!	CTTCGTAACATGTTTTTAAA+TGG	+	chr2_2:18792685-18792704	Msa0242540:CDS	25.0%
!!!	AACATGTTTTTAAATGGGAT+AGG	+	chr2_2:18792691-18792710	Msa0242540:CDS	25.0%
!	GAAATGAAAAGTGAAATTTG+TGG	+	chr2_2:18792775-18792794	Msa0242540:CDS	25.0%
!	TAATTAGTTGTTTGAATTGC+AGG	+	chr2_2:18792968-18792987	Msa0242540:three_prime_UTR	25.0%
!	GCTATACTAATGGCTTATTT+TGG	-	chr2_2:18789758-18789777	None:intergenic	30.0%
	TACATCAAACAAAATGGTGA+AGG	+	chr2_2:18789861-18789880	Msa0242540:CDS	30.0%
!!	TCTTGTTATTGGAGAATTCA+CGG	+	chr2_2:18790273-18790292	Msa0242540:intron	30.0%
!	AGGAGTATAAGTTTGAACTT+AGG	+	chr2_2:18790690-18790709	Msa0242540:intron	30.0%
!	TATTGATGCTTTTCTTGAAG+CGG	-	chr2_2:18791046-18791065	None:intergenic	30.0%
	AAAATCAGTGTCCAAAGATA+TGG	-	chr2_2:18791293-18791312	None:intergenic	30.0%
!!	ACTGATTTTCAAATCGAGTA+GGG	+	chr2_2:18791304-18791323	Msa0242540:intron	30.0%
!	ATAAAGTGTCCAAAGATCTA+TGG	-	chr2_2:18791400-18791419	None:intergenic	30.0%
!	ACTCTTGCTATGAAAATTGA+CGG	+	chr2_2:18791466-18791485	Msa0242540:intron	30.0%
	AAATTGTTTGGTTGTATAGG+TGG	+	chr2_2:18792248-18792267	Msa0242540:intron	30.0%
	ACATCCAAAGCAATTAATCA+AGG	+	chr2_2:18792406-18792425	Msa0242540:CDS	30.0%
	CATCCAAAGCAATTAATCAA+GGG	+	chr2_2:18792407-18792426	Msa0242540:CDS	30.0%
	TTTCCCTTGATTAATTGCTT+TGG	-	chr2_2:18792413-18792432	None:intergenic	30.0%
!!!	GTTGTTTTTTCTTTAGGCAT+TGG	-	chr2_2:18792496-18792515	None:intergenic	30.0%
	ATTGAATATTGATGAGGGTT+TGG	+	chr2_2:18792627-18792646	Msa0242540:CDS	30.0%
	TTGAATATTGATGAGGGTTT+GGG	+	chr2_2:18792628-18792647	Msa0242540:CDS	30.0%
	TCATCATCTAGCCATTTATA+TGG	-	chr2_2:18792655-18792674	None:intergenic	30.0%
	ATTTGTGGCTCATCATATAA+TGG	+	chr2_2:18792790-18792809	Msa0242540:CDS	30.0%
	ATTATGATCAGTTGTCTGAT+TGG	+	chr2_2:18792863-18792882	Msa0242540:CDS	30.0%
	TTATGATCAGTTGTCTGATT+GGG	+	chr2_2:18792864-18792883	Msa0242540:CDS	30.0%
!!	GATTTTATTTCCTTGCATCT+TGG	+	chr2_2:18793034-18793053	Msa0242540:three_prime_UTR	30.0%
	TAAGCCATTAGTATAGCCAA+TGG	+	chr2_2:18789761-18789780	Msa0242540:exon	35.0%
	AAGCCATTAGTATAGCCAAT+GGG	+	chr2_2:18789762-18789781	Msa0242540:exon	35.0%
	AACAAAATGGTGAAGGATCT+TGG	+	chr2_2:18789868-18789887	Msa0242540:CDS	35.0%
!!	TATGAAGGTTTGTTAAGGTG+TGG	+	chr2_2:18790002-18790021	Msa0242540:intron	35.0%
!!	ATGAAGGTTTGTTAAGGTGT+GGG	+	chr2_2:18790003-18790022	Msa0242540:intron	35.0%
	AATGATTTCTTCCTCATGAG+GGG	-	chr2_2:18790090-18790109	None:intergenic	35.0%
	CAATGATTTCTTCCTCATGA+GGG	-	chr2_2:18790091-18790110	None:intergenic	35.0%
	ACAATGATTTCTTCCTCATG+AGG	-	chr2_2:18790092-18790111	None:intergenic	35.0%
!	CTATTTTCGTCTCACAATCA+TGG	-	chr2_2:18790469-18790488	None:intergenic	35.0%
	CTGCAAAGACGTTGATATTT+AGG	+	chr2_2:18790670-18790689	Msa0242540:intron	35.0%
	TGCTTATAAACGTGGTAAGA+GGG	-	chr2_2:18790762-18790781	None:intergenic	35.0%
	TTGCTTATAAACGTGGTAAG+AGG	-	chr2_2:18790763-18790782	None:intergenic	35.0%
	TGGACACTATGATTGGTAAA+TGG	-	chr2_2:18790918-18790937	None:intergenic	35.0%
	AATAGACTGGACACTATGAT+TGG	-	chr2_2:18790925-18790944	None:intergenic	35.0%
	TATTTGAATCTCTTGCTGAG+AGG	+	chr2_2:18791003-18791022	Msa0242540:intron	35.0%
!!	CAAGAAAAGCATCAATAGCA+TGG	+	chr2_2:18791049-18791068	Msa0242540:intron	35.0%
	CGTGCATAAATCCATATCTT+TGG	+	chr2_2:18791279-18791298	Msa0242540:intron	35.0%
!!!	CACTGATTTTCAAATCGAGT+AGG	+	chr2_2:18791303-18791322	Msa0242540:intron	35.0%
	TCTTGTACTCCATAGATCTT+TGG	+	chr2_2:18791388-18791407	Msa0242540:intron	35.0%
!!	GAGTTTTGGTAATCTGGATT+CGG	-	chr2_2:18791450-18791469	None:intergenic	35.0%
!!	TAGCAAGAGTTTTGGTAATC+TGG	-	chr2_2:18791456-18791475	None:intergenic	35.0%
	ACGTTTCACGGAAATAAAGT+AGG	-	chr2_2:18791509-18791528	None:intergenic	35.0%
	TTGGTATCCTAAAGTTTGGT+CGG	-	chr2_2:18791557-18791576	None:intergenic	35.0%
	TTGTTGATATTTCACTCTGG+AGG	+	chr2_2:18792071-18792090	Msa0242540:intron	35.0%
	AATGAGCAACAAGACATGTT+TGG	-	chr2_2:18792169-18792188	None:intergenic	35.0%
	ATTGGAACTCTCATTTGAGA+AGG	+	chr2_2:18792323-18792342	Msa0242540:CDS	35.0%
	CTATTGTCTTCTTCTATGCT+TGG	-	chr2_2:18792445-18792464	None:intergenic	35.0%
	CATAGAAGAAGACAATAGCA+TGG	+	chr2_2:18792447-18792466	Msa0242540:CDS	35.0%
!!	TTCTTTAGGCATTGGTTCAA+GGG	-	chr2_2:18792488-18792507	None:intergenic	35.0%
!!	TTTCTTTAGGCATTGGTTCA+AGG	-	chr2_2:18792489-18792508	None:intergenic	35.0%
!	TGACTTTAGAAAGATGCATG+TGG	+	chr2_2:18792732-18792751	Msa0242540:CDS	35.0%
!	GACTTTAGAAAGATGCATGT+GGG	+	chr2_2:18792733-18792752	Msa0242540:CDS	35.0%
!	ACTTTAGAAAGATGCATGTG+GGG	+	chr2_2:18792734-18792753	Msa0242540:CDS	35.0%
!!	GGGGATAATGGAAACAAATA+AGG	+	chr2_2:18792753-18792772	Msa0242540:CDS	35.0%
!	TCATCATATAATGGAGAGAG+TGG	+	chr2_2:18792799-18792818	Msa0242540:CDS	35.0%
	AGACAACTGATCATAATCTG+TGG	-	chr2_2:18792860-18792879	None:intergenic	35.0%
	ACATATCTTTCCAAGATGCA+AGG	-	chr2_2:18793047-18793066	None:intergenic	35.0%
!	CTTCCCATTGGCTATACTAA+TGG	-	chr2_2:18789768-18789787	None:intergenic	40.0%
!	AAGAGCTCCTTGTTGTGAAA+AGG	+	chr2_2:18789785-18789804	Msa0242540:CDS	40.0%
!	CTCCTTGTTGTGAAAAGGTT+GGG	+	chr2_2:18789790-18789809	Msa0242540:CDS	40.0%
!	AACCCAACCTTTTCACAACA+AGG	-	chr2_2:18789795-18789814	None:intergenic	40.0%
!!	GAAAAGGTTGGGTTGAAGAA+AGG	+	chr2_2:18789801-18789820	Msa0242540:CDS	40.0%
!!	TTGGGTTGAAGAAAGGAAGA+TGG	+	chr2_2:18789808-18789827	Msa0242540:CDS	40.0%
	AAAATGGTGAAGGATCTTGG+AGG	+	chr2_2:18789871-18789890	Msa0242540:CDS	40.0%
!	AGGTTTTTGCCTAAGAAAGC+AGG	+	chr2_2:18789891-18789910	Msa0242540:CDS	40.0%
	GGAAGAGTTGTAGACTAAGA+TGG	+	chr2_2:18790024-18790043	Msa0242540:CDS	40.0%
	TGCATGCTGTTCTTGGAAAT+AGG	+	chr2_2:18790117-18790136	Msa0242540:CDS	40.0%
	GAGAGGGGAGTAGAAATTAA+GGG	-	chr2_2:18790158-18790177	None:intergenic	40.0%
	TGAGAGGGGAGTAGAAATTA+AGG	-	chr2_2:18790159-18790178	None:intergenic	40.0%
	ATGACATCCATTGTGTGAGA+GGG	-	chr2_2:18790174-18790193	None:intergenic	40.0%
!	CTATCGAAACCCCTTTTACA+TGG	+	chr2_2:18790491-18790510	Msa0242540:intron	40.0%
	TTTCTTGAAGCGGAAGAGTA+GGG	-	chr2_2:18791036-18791055	None:intergenic	40.0%
!	TTTTCTTGAAGCGGAAGAGT+AGG	-	chr2_2:18791037-18791056	None:intergenic	40.0%
	TTATCCCAAACCCTAACCAA+AGG	-	chr2_2:18791213-18791232	None:intergenic	40.0%
!	TAGGGTTTGGGATAAACACA+CGG	+	chr2_2:18791218-18791237	Msa0242540:intron	40.0%
	AGACATTTATGAGTGACCTC+CGG	-	chr2_2:18791255-18791274	None:intergenic	40.0%
	CCTAAAGTTTGGTCGGATAT+CGG	-	chr2_2:18791550-18791569	None:intergenic	40.0%
	GTGATAGCATCACATTTACC+AGG	+	chr2_2:18792274-18792293	Msa0242540:CDS	40.0%
	ATCTCATTATCTGTTCGTCC+TGG	-	chr2_2:18792295-18792314	None:intergenic	40.0%
	GATGTAGATGCCATATCAAG+GGG	-	chr2_2:18792391-18792410	None:intergenic	40.0%
	GGATGTAGATGCCATATCAA+GGG	-	chr2_2:18792392-18792411	None:intergenic	40.0%
	TGGATGTAGATGCCATATCA+AGG	-	chr2_2:18792393-18792412	None:intergenic	40.0%
!	AGGGTTTGGGACCATATAAA+TGG	+	chr2_2:18792641-18792660	Msa0242540:CDS	40.0%
	AAAGATGCATGTGGGGATAA+TGG	+	chr2_2:18792741-18792760	Msa0242540:CDS	40.0%
!	TATAATGGAGAGAGTGGAGA+AGG	+	chr2_2:18792805-18792824	Msa0242540:CDS	40.0%
!	ATAATGGAGAGAGTGGAGAA+GGG	+	chr2_2:18792806-18792825	Msa0242540:CDS	40.0%
!	ACCAAATGAAGACTTGCTTG+TGG	+	chr2_2:18792902-18792921	Msa0242540:CDS	40.0%
!	CCAAATGAAGACTTGCTTGT+GGG	+	chr2_2:18792903-18792922	Msa0242540:CDS	40.0%
!	CAAATGAAGACTTGCTTGTG+GGG	+	chr2_2:18792904-18792923	Msa0242540:CDS	40.0%
	TTCATGATTTCACCAATGCC+TGG	-	chr2_2:18792931-18792950	None:intergenic	40.0%
!!	GGCATTGGTGAAATCATGAA+TGG	+	chr2_2:18792931-18792950	Msa0242540:CDS	40.0%
!	GCTCCTTGTTGTGAAAAGGT+TGG	+	chr2_2:18789789-18789808	Msa0242540:CDS	45.0%
	TTGAGAGCAGATGTGAAGAG+AGG	+	chr2_2:18790056-18790075	Msa0242540:CDS	45.0%
	AGGAAACATATCCCCTCATG+AGG	+	chr2_2:18790076-18790095	Msa0242540:CDS	45.0%
!	GTCAAGTTGCATGCTGTTCT+TGG	+	chr2_2:18790110-18790129	Msa0242540:CDS	45.0%
	TGACATCCATTGTGTGAGAG+GGG	-	chr2_2:18790173-18790192	None:intergenic	45.0%
	CATGACATCCATTGTGTGAG+AGG	-	chr2_2:18790175-18790194	None:intergenic	45.0%
	TTCTTGAAGCGGAAGAGTAG+GGG	-	chr2_2:18791035-18791054	None:intergenic	45.0%
	TGGAAAGCAACTTGAAGACC+CGG	+	chr2_2:18791179-18791198	Msa0242540:intron	45.0%
	TAACCAAAGGAAGGAAGACC+GGG	-	chr2_2:18791200-18791219	None:intergenic	45.0%
	CTAACCAAAGGAAGGAAGAC+CGG	-	chr2_2:18791201-18791220	None:intergenic	45.0%
	GGTCTTCCTTCCTTTGGTTA+GGG	+	chr2_2:18791200-18791219	Msa0242540:intron	45.0%
	TCCTTCCTTTGGTTAGGGTT+TGG	+	chr2_2:18791205-18791224	Msa0242540:intron	45.0%
	CCTTCCTTTGGTTAGGGTTT+GGG	+	chr2_2:18791206-18791225	Msa0242540:intron	45.0%
	TCCCATAAGCGACAAGCTAT+GGG	+	chr2_2:18791327-18791346	Msa0242540:intron	45.0%
	CCGATATCCGACCAAACTTT+AGG	+	chr2_2:18791547-18791566	Msa0242540:intron	45.0%
	CCCACAAGCAAGTCTTCATT+TGG	-	chr2_2:18792906-18792925	None:intergenic	45.0%
!!	ATAAATTAATCAAAATTATA+AGG	+	chr2_2:18790980-18790999	Msa0242540:intron	5.0%
	CAACAAGGAGCTCTTCCCAT+TGG	-	chr2_2:18789780-18789799	None:intergenic	50.0%
!!	AGGAAGATGGACTGCTGAAG+AGG	+	chr2_2:18789821-18789840	Msa0242540:CDS	50.0%
	TCTACTCCCCTCTCACACAA+TGG	+	chr2_2:18790164-18790183	Msa0242540:intron	50.0%
	CGGTCTTCCTTCCTTTGGTT+AGG	+	chr2_2:18791199-18791218	Msa0242540:intron	50.0%
	CCCAAACCCTAACCAAAGGA+AGG	-	chr2_2:18791209-18791228	None:intergenic	50.0%
	CATTTATGAGTGACCTCCGG+AGG	-	chr2_2:18791252-18791271	None:intergenic	50.0%
	GTCCCATAAGCGACAAGCTA+TGG	+	chr2_2:18791326-18791345	Msa0242540:intron	50.0%
!	CCCCATAGCTTGTCGCTTAT+GGG	-	chr2_2:18791331-18791350	None:intergenic	50.0%
	CCCATAAGCGACAAGCTATG+GGG	+	chr2_2:18791328-18791347	Msa0242540:intron	50.0%
!	ACCCCATAGCTTGTCGCTTA+TGG	-	chr2_2:18791332-18791351	None:intergenic	50.0%
	GTAGATGCCATATCAAGGGG+TGG	-	chr2_2:18792388-18792407	None:intergenic	50.0%
	AGACCCGGTCTTCCTTCCTT+TGG	+	chr2_2:18791194-18791213	Msa0242540:intron	55.0%
	ACACACGGTCTTCCTTCCTC+CGG	+	chr2_2:18791233-18791252	Msa0242540:intron	55.0%
	TATGAGTGACCTCCGGAGGA+AGG	-	chr2_2:18791248-18791267	None:intergenic	55.0%
!!	GGGTGGTGGAGACTCGTTTA+TGG	-	chr2_2:18792371-18792390	None:intergenic	55.0%
	GTCTCCACCACCCCTTGATA+TGG	+	chr2_2:18792378-18792397	Msa0242540:CDS	55.0%
	GATGCCATATCAAGGGGTGG+TGG	-	chr2_2:18792385-18792404	None:intergenic	55.0%
!	AAGACTTGCTTGTGGGGTCC+AGG	+	chr2_2:18792910-18792929	Msa0242540:CDS	55.0%
	TGCTTGTGGGGTCCAGGCAT+TGG	+	chr2_2:18792916-18792935	Msa0242540:CDS	60.0%
	CACGGTCTTCCTTCCTCCGG+AGG	+	chr2_2:18791236-18791255	Msa0242540:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_2	gene	18789755	18793076	18789755	ID=Msa0242540;Name=Msa0242540
chr2_2	mRNA	18789755	18793076	18789755	ID=Msa0242540-mRNA-1;Parent=Msa0242540;Name=Msa0242540-mRNA-1;_AED=0.06;_eAED=0.06;_QI=25\|1\|1\|1\|1\|1\|3\|110\|320
chr2_2	exon	18789755	18789912	18789755	ID=Msa0242540-mRNA-1:exon:7686;Parent=Msa0242540-mRNA-1
chr2_2	exon	18790009	18790138	18790009	ID=Msa0242540-mRNA-1:exon:7687;Parent=Msa0242540-mRNA-1
chr2_2	exon	18792267	18793076	18792267	ID=Msa0242540-mRNA-1:exon:7688;Parent=Msa0242540-mRNA-1
chr2_2	five_prime_UTR	18789755	18789779	18789755	ID=Msa0242540-mRNA-1:five_prime_utr;Parent=Msa0242540-mRNA-1
chr2_2	CDS	18789780	18789912	18789780	ID=Msa0242540-mRNA-1:cds;Parent=Msa0242540-mRNA-1
chr2_2	CDS	18790009	18790138	18790009	ID=Msa0242540-mRNA-1:cds;Parent=Msa0242540-mRNA-1
chr2_2	CDS	18792267	18792966	18792267	ID=Msa0242540-mRNA-1:cds;Parent=Msa0242540-mRNA-1
chr2_2	three_prime_UTR	18792967	18793076	18792967	ID=Msa0242540-mRNA-1:three_prime_utr;Parent=Msa0242540-mRNA-1

Gene Sequence

>Msa0242540

ATGGGAAGAGCTCCTTGTTGTGAAAAGGTTGGGTTGAAGAAAGGAAGATGGACTGCTGAAGAGGATCAGATCTTGACTGATTACATCAAACAAAATGGTGAAGGATCTTGGAGGTTTTTGCCTAAGAAAGCAGGTTTGTTAAGGTGTGGGAAGAGTTGTAGACTAAGATGGATCAACTATTTGAGAGCAGATGTGAAGAGAGGAAACATATCCCCTCATGAGGAAGAAATCATTGTCAAGTTGCATGCTGTTCTTGGAAATAGGTGGTCAGTGATAGCATCACATTTACCAGGACGAACAGATAATGAGATAAAGAACTATTGGAACTCTCATTTGAGAAGGAAAATTTACTGCTTCATGAGATCCATAAACGAGTCTCCACCACCCCTTGATATGGCATCTACATCCAAAGCAATTAATCAAGGGAAAATAAATAATCCAAGCATAGAAGAAGACAATAGCATGGCTTTGATTCAAAATTCCCTTGAACCAATGCCTAAAGAAAAAACAACTTCACAATACTATAATGTACAAGGAGTTGAAGATATTTCGTGTGAGAATAATATTTATGAAATGAAGGGTAACATAAATAATACAGTTGCATCATACCCTAGTAAAAATGAATTGAATATTGATGAGGGTTTGGGACCATATAAATGGCTAGATGATGAAATTATGAAACTTCGTAACATGTTTTTAAATGGGATAGGAAATTATAATTATGATTGTGACTTTAGAAAGATGCATGTGGGGATAATGGAAACAAATAAGGAAATGAAAAGTGAAATTTGTGGCTCATCATATAATGGAGAGAGTGGAGAAGGGTACATTTCTAATGCATCAGTAAATTCTGCCACAGATTATGATCAGTTGTCTGATTGGGACTTTTGTCAAGAAGACCAAATGAAGACTTGCTTGTGGGGTCCAGGCATTGGTGAAATCATGAATGGTTTTTATCAGTAA

Protein sequence

>Msa0242540

MGRAPCCEKVGLKKGRWTAEEDQILTDYIKQNGEGSWRFLPKKAGLLRCGKSCRLRWINYLRADVKRGNISPHEEEIIVKLHAVLGNRWSVIASHLPGRTDNEIKNYWNSHLRRKIYCFMRSINESPPPLDMASTSKAINQGKINNPSIEEDNSMALIQNSLEPMPKEKTTSQYYNVQGVEDISCENNIYEMKGNINNTVASYPSKNELNIDEGLGPYKWLDDEIMKLRNMFLNGIGNYNYDCDFRKMHVGIMETNKEMKSEICGSSYNGESGEGYISNASVNSATDYDQLSDWDFCQEDQMKTCLWGPGIGEIMNGFYQ*