Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321580 | XP_003595077.1 | 83.796 | 216 | 26 | 1 | 1 | 207 | 1 | 216 | 1.81e-124 | 362 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321580 | sp|Q2HIV9|BH035_ARATH | 63.874 | 191 | 64 | 4 | 17 | 207 | 30 | 215 | 9.56e-71 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0321580 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0283490 | Msa0321580 | 0.803883 | 2.817841e-49 | -8.615850e-47 |
| Msa0283600 | Msa0321580 | 0.802715 | 4.919452e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321580 | MtrunA17_Chr2g0298751 | 83.796 | 216 | 26 | 1 | 1 | 207 | 1 | 216 | 1.66e-128 | 362 |
| Msa0321580 | MtrunA17_Chr8g0365711 | 32.934 | 167 | 104 | 3 | 42 | 208 | 243 | 401 | 1.36e-23 | 97.8 |
| Msa0321580 | MtrunA17_Chr1g0211081 | 28.767 | 219 | 129 | 5 | 12 | 206 | 280 | 495 | 4.11e-20 | 88.2 |
| Msa0321580 | MtrunA17_Chr2g0320291 | 31.944 | 144 | 78 | 3 | 42 | 183 | 132 | 257 | 2.72e-17 | 79.0 |
| Msa0321580 | MtrunA17_Chr4g0028071 | 32.051 | 156 | 93 | 3 | 42 | 196 | 148 | 291 | 5.39e-16 | 75.5 |
| Msa0321580 | MtrunA17_Chr3g0131691 | 32.704 | 159 | 104 | 2 | 39 | 197 | 294 | 449 | 1.24e-15 | 75.1 |
| Msa0321580 | MtrunA17_Chr7g0252041 | 32.500 | 160 | 103 | 3 | 40 | 197 | 283 | 439 | 3.75e-15 | 73.9 |
| Msa0321580 | MtrunA17_Chr4g0049331 | 26.768 | 198 | 123 | 5 | 2 | 197 | 99 | 276 | 5.85e-15 | 72.4 |
| Msa0321580 | MtrunA17_Chr7g0275821 | 29.801 | 151 | 85 | 4 | 44 | 194 | 253 | 382 | 1.10e-13 | 69.3 |
| Msa0321580 | MtrunA17_Chr7g0260841 | 49.367 | 79 | 29 | 3 | 44 | 122 | 356 | 423 | 9.62e-13 | 67.0 |
| Msa0321580 | MtrunA17_Chr8g0366751 | 51.667 | 60 | 29 | 0 | 44 | 103 | 463 | 522 | 1.56e-12 | 66.2 |
| Msa0321580 | MtrunA17_Chr5g0411341 | 49.296 | 71 | 33 | 1 | 44 | 111 | 494 | 564 | 3.72e-12 | 65.1 |
| Msa0321580 | MtrunA17_Chr5g0400661 | 25.311 | 241 | 143 | 9 | 1 | 217 | 97 | 324 | 4.13e-12 | 64.7 |
| Msa0321580 | MtrunA17_Chr8g0346151 | 50.000 | 62 | 24 | 1 | 44 | 105 | 280 | 334 | 8.44e-12 | 63.9 |
| Msa0321580 | MtrunA17_Chr2g0333611 | 23.529 | 153 | 102 | 2 | 44 | 196 | 46 | 183 | 1.86e-11 | 61.6 |
| Msa0321580 | MtrunA17_Chr8g0346161 | 44.286 | 70 | 28 | 1 | 44 | 102 | 292 | 361 | 2.56e-11 | 62.4 |
| Msa0321580 | MtrunA17_Chr1g0185621 | 47.368 | 57 | 30 | 0 | 32 | 88 | 464 | 520 | 4.73e-11 | 62.0 |
| Msa0321580 | MtrunA17_Chr2g0280161 | 49.091 | 55 | 28 | 0 | 44 | 98 | 178 | 232 | 7.35e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321580 | AT5G57150.2 | 63.402 | 194 | 66 | 4 | 17 | 210 | 30 | 218 | 2.46e-73 | 222 |
| Msa0321580 | AT5G57150.3 | 63.874 | 191 | 64 | 4 | 17 | 207 | 30 | 215 | 1.38e-72 | 220 |
| Msa0321580 | AT5G57150.5 | 63.402 | 194 | 66 | 4 | 13 | 206 | 25 | 213 | 3.68e-72 | 219 |
| Msa0321580 | AT5G57150.1 | 63.077 | 195 | 67 | 4 | 13 | 207 | 25 | 214 | 5.40e-72 | 219 |
| Msa0321580 | AT5G57150.4 | 60.976 | 205 | 73 | 5 | 17 | 221 | 30 | 227 | 2.48e-71 | 218 |
| Msa0321580 | AT4G29930.3 | 48.458 | 227 | 98 | 3 | 1 | 208 | 1 | 227 | 9.12e-64 | 199 |
| Msa0321580 | AT4G29930.7 | 48.458 | 227 | 98 | 3 | 1 | 208 | 1 | 227 | 9.12e-64 | 199 |
| Msa0321580 | AT4G29930.1 | 47.788 | 226 | 99 | 3 | 1 | 207 | 1 | 226 | 1.24e-62 | 196 |
| Msa0321580 | AT4G29930.5 | 48.858 | 219 | 80 | 3 | 1 | 208 | 1 | 198 | 6.95e-62 | 193 |
| Msa0321580 | AT4G29930.6 | 48.624 | 218 | 83 | 3 | 1 | 207 | 1 | 200 | 2.11e-61 | 192 |
| Msa0321580 | AT4G29930.2 | 48.165 | 218 | 81 | 3 | 1 | 207 | 1 | 197 | 1.14e-60 | 190 |
| Msa0321580 | AT4G29930.4 | 46.243 | 173 | 74 | 3 | 1 | 154 | 1 | 173 | 1.26e-40 | 137 |
| Msa0321580 | AT2G28160.2 | 33.146 | 178 | 97 | 7 | 28 | 196 | 110 | 274 | 6.26e-18 | 81.3 |
| Msa0321580 | AT2G28160.1 | 33.146 | 178 | 97 | 7 | 28 | 196 | 110 | 274 | 7.07e-18 | 81.3 |
| Msa0321580 | AT3G26744.6 | 32.370 | 173 | 110 | 3 | 40 | 210 | 304 | 471 | 4.68e-16 | 77.0 |
| Msa0321580 | AT3G26744.1 | 32.500 | 160 | 101 | 3 | 40 | 197 | 304 | 458 | 7.66e-15 | 73.6 |
| Msa0321580 | AT3G26744.4 | 32.500 | 160 | 101 | 3 | 40 | 197 | 304 | 458 | 7.66e-15 | 73.6 |
| Msa0321580 | AT3G26744.2 | 32.500 | 160 | 101 | 3 | 40 | 197 | 304 | 458 | 7.66e-15 | 73.6 |
| Msa0321580 | AT1G01260.1 | 55.738 | 61 | 27 | 0 | 44 | 104 | 434 | 494 | 2.10e-14 | 72.0 |
| Msa0321580 | AT1G01260.2 | 55.738 | 61 | 27 | 0 | 44 | 104 | 434 | 494 | 2.10e-14 | 72.0 |
| Msa0321580 | AT1G01260.3 | 55.738 | 61 | 27 | 0 | 44 | 104 | 434 | 494 | 2.10e-14 | 72.0 |
| Msa0321580 | AT1G12860.1 | 32.911 | 158 | 99 | 3 | 40 | 197 | 264 | 414 | 5.94e-14 | 70.9 |
| Msa0321580 | AT2G16910.1 | 29.545 | 176 | 111 | 3 | 42 | 206 | 313 | 486 | 6.58e-14 | 70.9 |
| Msa0321580 | AT1G12860.2 | 33.544 | 158 | 98 | 3 | 40 | 197 | 264 | 414 | 6.68e-14 | 70.5 |
| Msa0321580 | AT2G46510.1 | 58.182 | 55 | 23 | 0 | 44 | 98 | 396 | 450 | 1.20e-13 | 70.1 |
| Msa0321580 | AT5G46760.1 | 34.615 | 156 | 81 | 7 | 44 | 193 | 416 | 556 | 7.80e-13 | 67.4 |
| Msa0321580 | AT1G32640.1 | 55.000 | 60 | 25 | 1 | 44 | 103 | 453 | 510 | 1.40e-12 | 67.0 |
| Msa0321580 | AT4G16430.1 | 56.364 | 55 | 24 | 0 | 44 | 98 | 321 | 375 | 1.56e-12 | 66.6 |
| Msa0321580 | AT4G17880.1 | 31.250 | 160 | 77 | 4 | 44 | 193 | 417 | 553 | 1.96e-12 | 66.2 |
| Msa0321580 | AT1G63650.3 | 28.994 | 169 | 113 | 3 | 41 | 203 | 403 | 570 | 3.69e-12 | 65.5 |
| Msa0321580 | AT1G63650.1 | 28.994 | 169 | 113 | 3 | 41 | 203 | 403 | 570 | 3.69e-12 | 65.5 |
| Msa0321580 | AT1G63650.2 | 28.994 | 169 | 113 | 3 | 41 | 203 | 403 | 570 | 3.69e-12 | 65.5 |
| Msa0321580 | AT4G37850.2 | 29.268 | 164 | 97 | 5 | 44 | 203 | 153 | 301 | 5.65e-12 | 64.7 |
| Msa0321580 | AT4G37850.1 | 29.268 | 164 | 97 | 5 | 44 | 203 | 153 | 301 | 5.65e-12 | 64.7 |
| Msa0321580 | AT5G46830.1 | 30.263 | 152 | 87 | 3 | 44 | 193 | 344 | 478 | 6.86e-12 | 64.7 |
Find 53 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATAATGGAACTTGAATT+TGG | 0.174122 | 2_4:-22997536 | Msa0321580:CDS |
| CTATCCTTTAATTTCATTTC+AGG | 0.183404 | 2_4:-22996188 | Msa0321580:CDS |
| CTGATTTGTTCTCTTCTTCT+TGG | 0.191764 | 2_4:+22997451 | None:intergenic |
| TACCATTTAATTTGCTTTAT+AGG | 0.221456 | 2_4:-22996153 | Msa0321580:CDS |
| TGATGATTGAAAGAAATTTA+AGG | 0.231892 | 2_4:+22998382 | None:intergenic |
| GGATAAAGCTTCAATTATTA+AGG | 0.255192 | 2_4:-22997612 | Msa0321580:CDS |
| CACTCCTGAAATGAAATTAA+AGG | 0.269278 | 2_4:+22996184 | None:intergenic |
| TAGTTTGATTTAATATTATT+AGG | 0.306948 | 2_4:+22997509 | None:intergenic |
| TACCTATAAAGCAAATTAAA+TGG | 0.310720 | 2_4:+22996151 | None:intergenic |
| GGATTGGATGAGGCTTTAAC+AGG | 0.339402 | 2_4:-22998146 | Msa0321580:CDS |
| ATGTTTACCTTGCTAATGTT+TGG | 0.350291 | 2_4:+22997999 | None:intergenic |
| TGTTTACCTTGCTAATGTTT+GGG | 0.357210 | 2_4:+22998000 | None:intergenic |
| GCCTGAGAAAGAGGATATAT+TGG | 0.364460 | 2_4:+22996246 | None:intergenic |
| TTGTGGTTGCAGTTGGGGAT+TGG | 0.368783 | 2_4:-22998162 | Msa0321580:intron |
| TTTACCTCAAGGACTTCAAT+TGG | 0.374167 | 2_4:+22997398 | None:intergenic |
| GGTTATTCAAGCTGAGATAA+TGG | 0.376023 | 2_4:-22997549 | Msa0321580:CDS |
| TTAATTTGCTTTATAGGTAG+TGG | 0.409828 | 2_4:-22996147 | None:intergenic |
| TTGCAGTTGGGGATTGGATG+AGG | 0.422701 | 2_4:-22998156 | Msa0321580:intron |
| GTGCTGAGTACAACCCTTAC+CGG | 0.425637 | 2_4:-22998296 | Msa0321580:CDS |
| GTTGTTAAAGTTGAAATTGA+AGG | 0.431964 | 2_4:+22998333 | None:intergenic |
| ACATTGTCTCTGAGAGGAAC+AGG | 0.441534 | 2_4:-22998067 | Msa0321580:CDS |
| TACATGTTGGTCTCCCGGTA+AGG | 0.449399 | 2_4:+22998282 | None:intergenic |
| AGATAATGGAACTTGAATTT+GGG | 0.453081 | 2_4:-22997535 | Msa0321580:CDS |
| TGAGCATGACATGTAACAAA+AGG | 0.468788 | 2_4:-22996330 | Msa0321580:CDS |
| GCGGATGGTGCAGCATCATC+AGG | 0.473222 | 2_4:-22998104 | Msa0321580:CDS |
| GCCAATATATCCTCTTTCTC+AGG | 0.477840 | 2_4:-22996247 | Msa0321580:CDS |
| ACACATGGAAGAGAATATAA+TGG | 0.483631 | 2_4:-22996356 | Msa0321580:CDS |
| CGAAAGCCTGCCTGAGAAAG+AGG | 0.487286 | 2_4:+22996237 | None:intergenic |
| TTACCTACATGTTGGTCTCC+CGG | 0.526666 | 2_4:+22998277 | None:intergenic |
| AAGAGCTTCCTGTGTTGCTA+AGG | 0.527358 | 2_4:-22997475 | Msa0321580:CDS |
| ACATGTTGGTCTCCCGGTAA+GGG | 0.528733 | 2_4:+22998283 | None:intergenic |
| ATATATCCTCTTTCTCAGGC+AGG | 0.530610 | 2_4:-22996243 | Msa0321580:CDS |
| AATTTCAACTTTAACAACCA+TGG | 0.540733 | 2_4:-22998328 | Msa0321580:exon |
| TGATGATGCTGCACCATCCG+CGG | 0.544506 | 2_4:+22998106 | None:intergenic |
| GAGCATGACATGTAACAAAA+GGG | 0.547151 | 2_4:-22996329 | Msa0321580:CDS |
| CTTTCCAATTGAAGTCCTTG+AGG | 0.548914 | 2_4:-22997402 | Msa0321580:intron |
| CTTTAATTTCATTTCAGGAG+TGG | 0.549143 | 2_4:-22996183 | Msa0321580:CDS |
| TTCTTGGACCTTAGCAACAC+AGG | 0.566724 | 2_4:+22997467 | None:intergenic |
| CTCAGCACCAATGTTCTCCA+TGG | 0.577641 | 2_4:+22998311 | None:intergenic |
| TGCTGAGTACAACCCTTACC+GGG | 0.581537 | 2_4:-22998295 | Msa0321580:CDS |
| TTCGAAGACAGTCTTCATTG+AGG | 0.583420 | 2_4:-22996218 | Msa0321580:CDS |
| GCAGCTTAGGGTTACACACA+TGG | 0.606797 | 2_4:-22996371 | Msa0321580:intron |
| TTAACAACCATGGAGAACAT+TGG | 0.610292 | 2_4:-22998318 | Msa0321580:exon |
| TAACAAAAGGGCAGACACAA+TGG | 0.615640 | 2_4:-22996317 | Msa0321580:CDS |
| TATGATTCAAGCTCCGCGGA+TGG | 0.621734 | 2_4:-22998119 | Msa0321580:CDS |
| GATTGGATGAGGCTTTAACA+GGG | 0.623983 | 2_4:-22998145 | Msa0321580:CDS |
| GGACCACTGCTCTAAGTGCA+AGG | 0.633774 | 2_4:+22998021 | None:intergenic |
| AGTCTTGCATGAGCAAGAGA+AGG | 0.639595 | 2_4:-22997570 | Msa0321580:CDS |
| CTAAGAACATTGTCTCTGAG+AGG | 0.650410 | 2_4:-22998073 | Msa0321580:CDS |
| ACTCCTTGCACTTAGAGCAG+TGG | 0.656584 | 2_4:-22998024 | Msa0321580:CDS |
| AGTGGTCCCAAACATTAGCA+AGG | 0.661525 | 2_4:-22998006 | Msa0321580:intron |
| TTGTCTCTGAGAGGAACAGG+AGG | 0.687982 | 2_4:-22998064 | Msa0321580:CDS |
| GTATTATGATTCAAGCTCCG+CGG | 0.725456 | 2_4:-22998123 | Msa0321580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGTTAATTAAGATATA+TGG | - | chr2_4:22996346-22996365 | Msa0321580:CDS | 10.0% |
| !! | TAGTGAAAATTATTAATTAA+TGG | + | chr2_4:22996574-22996593 | None:intergenic | 10.0% |
| !!! | TTGATTTTTTATTATTTGTT+TGG | - | chr2_4:22996620-22996639 | Msa0321580:intron | 10.0% |
| !!! | TAGTTTGATTTAATATTATT+AGG | + | chr2_4:22997025-22997044 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTAAGTTG+GGG | + | chr2_4:22997246-22997265 | None:intergenic | 10.0% |
| !!! | CTTTTTTTTTTTTTTAAGTT+GGG | + | chr2_4:22997247-22997266 | None:intergenic | 10.0% |
| !!! | TCTTTTTTTTTTTTTTAAGT+TGG | + | chr2_4:22997248-22997267 | None:intergenic | 10.0% |
| !! | AACTTAAAAAAAAAAAAAAG+AGG | - | chr2_4:22997247-22997266 | Msa0321580:intron | 10.0% |
| !!! | TTTTAAAAGTAATTATAAGA+TGG | + | chr2_4:22997549-22997568 | None:intergenic | 10.0% |
| !! | AATCAAATCAATATTTATAT+TGG | + | chr2_4:22997718-22997737 | None:intergenic | 10.0% |
| !!! | ATATATTAGCTTTATTTTTT+AGG | - | chr2_4:22997918-22997937 | Msa0321580:intron | 10.0% |
| !! | ATATTGTTAATTAAGATATA+TGG | - | chr2_4:22996346-22996365 | Msa0321580:CDS | 10.0% |
| !! | TAGTGAAAATTATTAATTAA+TGG | + | chr2_4:22996574-22996593 | None:intergenic | 10.0% |
| !!! | TTGATTTTTTATTATTTGTT+TGG | - | chr2_4:22996620-22996639 | Msa0321580:intron | 10.0% |
| !!! | TAGTTTGATTTAATATTATT+AGG | + | chr2_4:22997025-22997044 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTAAGTTG+GGG | + | chr2_4:22997246-22997265 | None:intergenic | 10.0% |
| !!! | CTTTTTTTTTTTTTTAAGTT+GGG | + | chr2_4:22997247-22997266 | None:intergenic | 10.0% |
| !!! | TCTTTTTTTTTTTTTTAAGT+TGG | + | chr2_4:22997248-22997267 | None:intergenic | 10.0% |
| !! | AACTTAAAAAAAAAAAAAAG+AGG | - | chr2_4:22997247-22997266 | Msa0321580:intron | 10.0% |
| !!! | TTTTAAAAGTAATTATAAGA+TGG | + | chr2_4:22997549-22997568 | None:intergenic | 10.0% |
| !! | AATCAAATCAATATTTATAT+TGG | + | chr2_4:22997718-22997737 | None:intergenic | 10.0% |
| !!! | ATATATTAGCTTTATTTTTT+AGG | - | chr2_4:22997918-22997937 | Msa0321580:intron | 10.0% |
| !!! | ATCAATTTCTTTTTAATGAT+GGG | - | chr2_4:22996874-22996893 | Msa0321580:intron | 15.0% |
| !! | CTCTTAAAGTATAAAAATTA+GGG | + | chr2_4:22997430-22997449 | None:intergenic | 15.0% |
| !! | ACTCTTAAAGTATAAAAATT+AGG | + | chr2_4:22997431-22997450 | None:intergenic | 15.0% |
| !!! | AAAGATCTTTTGAAATTTAA+TGG | + | chr2_4:22997617-22997636 | None:intergenic | 15.0% |
| !! | AGATAAAAAAAAATAGATAG+TGG | - | chr2_4:22997805-22997824 | Msa0321580:intron | 15.0% |
| !! | GATAAAAAAAAATAGATAGT+GGG | - | chr2_4:22997806-22997825 | Msa0321580:intron | 15.0% |
| !!! | CTAATATATTTTCTCTATTA+GGG | + | chr2_4:22997907-22997926 | None:intergenic | 15.0% |
| !!! | TTTAATCTATATTTGTTGTT+GGG | + | chr2_4:22997993-22998012 | None:intergenic | 15.0% |
| !!! | TGTGTAATTAATTTGATATA+TGG | - | chr2_4:22998131-22998150 | Msa0321580:CDS | 15.0% |
| !!! | ATCAATTTCTTTTTAATGAT+GGG | - | chr2_4:22996874-22996893 | Msa0321580:intron | 15.0% |
| !! | CTCTTAAAGTATAAAAATTA+GGG | + | chr2_4:22997430-22997449 | None:intergenic | 15.0% |
| !! | ACTCTTAAAGTATAAAAATT+AGG | + | chr2_4:22997431-22997450 | None:intergenic | 15.0% |
| !!! | AAAGATCTTTTGAAATTTAA+TGG | + | chr2_4:22997617-22997636 | None:intergenic | 15.0% |
| !! | AGATAAAAAAAAATAGATAG+TGG | - | chr2_4:22997805-22997824 | Msa0321580:intron | 15.0% |
| !! | GATAAAAAAAAATAGATAGT+GGG | - | chr2_4:22997806-22997825 | Msa0321580:intron | 15.0% |
| !!! | CTAATATATTTTCTCTATTA+GGG | + | chr2_4:22997907-22997926 | None:intergenic | 15.0% |
| !!! | TTTAATCTATATTTGTTGTT+GGG | + | chr2_4:22997993-22998012 | None:intergenic | 15.0% |
| !!! | TGTGTAATTAATTTGATATA+TGG | - | chr2_4:22998131-22998150 | Msa0321580:CDS | 15.0% |
| !! | TTAATTAAGATATATGGTTG+TGG | - | chr2_4:22996352-22996371 | Msa0321580:CDS | 20.0% |
| !!! | AATTTTCACTACTCAATTTT+TGG | - | chr2_4:22996583-22996602 | Msa0321580:intron | 20.0% |
| !!! | ATTTTCACTACTCAATTTTT+GGG | - | chr2_4:22996584-22996603 | Msa0321580:intron | 20.0% |
| !!! | TTTTTTAAACATGTTGTTAG+AGG | - | chr2_4:22996772-22996791 | Msa0321580:intron | 20.0% |
| !! | CAAATAATTATACCATATGA+TGG | + | chr2_4:22996836-22996855 | None:intergenic | 20.0% |
| !! | CATCATATGGTATAATTATT+TGG | - | chr2_4:22996834-22996853 | Msa0321580:intron | 20.0% |
| !! | TTAAAAAGAAATTGATGTCA+TGG | + | chr2_4:22996870-22996889 | None:intergenic | 20.0% |
| !!! | CATCAATTTCTTTTTAATGA+TGG | - | chr2_4:22996873-22996892 | Msa0321580:intron | 20.0% |
| !!! | TGAATCTAAGATTAAGTTTA+TGG | + | chr2_4:22997455-22997474 | None:intergenic | 20.0% |
| !! | TAATTATAAGATGGTCATTA+CGG | + | chr2_4:22997540-22997559 | None:intergenic | 20.0% |
| !! | TTATAAATTGGTTATAAGCA+TGG | + | chr2_4:22997841-22997860 | None:intergenic | 20.0% |
| !!! | GCTAATATATTTTCTCTATT+AGG | + | chr2_4:22997908-22997927 | None:intergenic | 20.0% |
| !! | GGTTGTTAAAAAAAAAAAAG+TGG | + | chr2_4:22997966-22997985 | None:intergenic | 20.0% |
| !!! | TTAATCTATATTTGTTGTTG+GGG | + | chr2_4:22997992-22998011 | None:intergenic | 20.0% |
| !!! | CTTTAATCTATATTTGTTGT+TGG | + | chr2_4:22997994-22998013 | None:intergenic | 20.0% |
| !! | TGATGCTAAAAAAATAAATG+TGG | - | chr2_4:22998050-22998069 | Msa0321580:CDS | 20.0% |
| !! | GATGCTAAAAAAATAAATGT+GGG | - | chr2_4:22998051-22998070 | Msa0321580:CDS | 20.0% |
| !! | ATGCTAAAAAAATAAATGTG+GGG | - | chr2_4:22998052-22998071 | Msa0321580:CDS | 20.0% |
| !!! | TACCATTTAATTTGCTTTAT+AGG | - | chr2_4:22998378-22998397 | Msa0321580:five_prime_UTR | 20.0% |
| !! | TACCTATAAAGCAAATTAAA+TGG | + | chr2_4:22998383-22998402 | None:intergenic | 20.0% |
| !! | TTAATTAAGATATATGGTTG+TGG | - | chr2_4:22996352-22996371 | Msa0321580:CDS | 20.0% |
| !!! | AATTTTCACTACTCAATTTT+TGG | - | chr2_4:22996583-22996602 | Msa0321580:intron | 20.0% |
| !!! | ATTTTCACTACTCAATTTTT+GGG | - | chr2_4:22996584-22996603 | Msa0321580:intron | 20.0% |
| !!! | TTTTTTAAACATGTTGTTAG+AGG | - | chr2_4:22996772-22996791 | Msa0321580:intron | 20.0% |
| !! | CAAATAATTATACCATATGA+TGG | + | chr2_4:22996836-22996855 | None:intergenic | 20.0% |
| !! | CATCATATGGTATAATTATT+TGG | - | chr2_4:22996834-22996853 | Msa0321580:intron | 20.0% |
| !! | TTAAAAAGAAATTGATGTCA+TGG | + | chr2_4:22996870-22996889 | None:intergenic | 20.0% |
| !!! | CATCAATTTCTTTTTAATGA+TGG | - | chr2_4:22996873-22996892 | Msa0321580:intron | 20.0% |
| !!! | TGAATCTAAGATTAAGTTTA+TGG | + | chr2_4:22997455-22997474 | None:intergenic | 20.0% |
| !! | TAATTATAAGATGGTCATTA+CGG | + | chr2_4:22997540-22997559 | None:intergenic | 20.0% |
| !! | TTATAAATTGGTTATAAGCA+TGG | + | chr2_4:22997841-22997860 | None:intergenic | 20.0% |
| !!! | GCTAATATATTTTCTCTATT+AGG | + | chr2_4:22997908-22997927 | None:intergenic | 20.0% |
| !! | GGTTGTTAAAAAAAAAAAAG+TGG | + | chr2_4:22997966-22997985 | None:intergenic | 20.0% |
| !!! | TTAATCTATATTTGTTGTTG+GGG | + | chr2_4:22997992-22998011 | None:intergenic | 20.0% |
| !!! | CTTTAATCTATATTTGTTGT+TGG | + | chr2_4:22997994-22998013 | None:intergenic | 20.0% |
| !! | TGATGCTAAAAAAATAAATG+TGG | - | chr2_4:22998050-22998069 | Msa0321580:CDS | 20.0% |
| !! | GATGCTAAAAAAATAAATGT+GGG | - | chr2_4:22998051-22998070 | Msa0321580:CDS | 20.0% |
| !! | ATGCTAAAAAAATAAATGTG+GGG | - | chr2_4:22998052-22998071 | Msa0321580:CDS | 20.0% |
| !!! | TACCATTTAATTTGCTTTAT+AGG | - | chr2_4:22998378-22998397 | Msa0321580:five_prime_UTR | 20.0% |
| !! | TACCTATAAAGCAAATTAAA+TGG | + | chr2_4:22998383-22998402 | None:intergenic | 20.0% |
| ! | GTTGTTAAAGTTGAAATTGA+AGG | + | chr2_4:22996201-22996220 | None:intergenic | 25.0% |
| ! | AATTTCAACTTTAACAACCA+TGG | - | chr2_4:22996203-22996222 | Msa0321580:CDS | 25.0% |
| !! | GTAAACATCACAAATTTTAG+TGG | - | chr2_4:22996547-22996566 | Msa0321580:intron | 25.0% |
| ! | AGTACGAAAGTAAATGAATT+TGG | - | chr2_4:22996653-22996672 | Msa0321580:intron | 25.0% |
| !!! | AATTTCTTTTTAATGATGGG+TGG | - | chr2_4:22996877-22996896 | Msa0321580:intron | 25.0% |
| ! | GGATAAAGCTTCAATTATTA+AGG | - | chr2_4:22996919-22996938 | Msa0321580:intron | 25.0% |
| !!! | AGATAATGGAACTTGAATTT+GGG | - | chr2_4:22996996-22997015 | Msa0321580:intron | 25.0% |
| ! | CAAAAATAAGACATTGTATG+AGG | - | chr2_4:22997676-22997695 | Msa0321580:intron | 25.0% |
| !! | TATATTGGAAATTTTTGCAC+AGG | + | chr2_4:22997703-22997722 | None:intergenic | 25.0% |
| ! | TAAGGTGGTGATTTATAAAT+TGG | + | chr2_4:22997853-22997872 | None:intergenic | 25.0% |
| ! | TATAAATCACCACCTTAATA+AGG | - | chr2_4:22997856-22997875 | Msa0321580:intron | 25.0% |
| !!! | TAATCTATATTTGTTGTTGG+GGG | + | chr2_4:22997991-22998010 | None:intergenic | 25.0% |
| ! | AGATTAAAGAAGAAATTGCA+AGG | - | chr2_4:22998005-22998024 | Msa0321580:intron | 25.0% |
| !! | CTATCCTTTAATTTCATTTC+AGG | - | chr2_4:22998343-22998362 | Msa0321580:five_prime_UTR | 25.0% |
| ! | GTTGTTAAAGTTGAAATTGA+AGG | + | chr2_4:22996201-22996220 | None:intergenic | 25.0% |
| ! | AATTTCAACTTTAACAACCA+TGG | - | chr2_4:22996203-22996222 | Msa0321580:CDS | 25.0% |
| !! | GTAAACATCACAAATTTTAG+TGG | - | chr2_4:22996547-22996566 | Msa0321580:intron | 25.0% |
| ! | AGTACGAAAGTAAATGAATT+TGG | - | chr2_4:22996653-22996672 | Msa0321580:intron | 25.0% |
| !!! | AATTTCTTTTTAATGATGGG+TGG | - | chr2_4:22996877-22996896 | Msa0321580:intron | 25.0% |
| ! | GGATAAAGCTTCAATTATTA+AGG | - | chr2_4:22996919-22996938 | Msa0321580:intron | 25.0% |
| !!! | AGATAATGGAACTTGAATTT+GGG | - | chr2_4:22996996-22997015 | Msa0321580:intron | 25.0% |
| ! | CAAAAATAAGACATTGTATG+AGG | - | chr2_4:22997676-22997695 | Msa0321580:intron | 25.0% |
| !! | TATATTGGAAATTTTTGCAC+AGG | + | chr2_4:22997703-22997722 | None:intergenic | 25.0% |
| ! | TAAGGTGGTGATTTATAAAT+TGG | + | chr2_4:22997853-22997872 | None:intergenic | 25.0% |
| ! | TATAAATCACCACCTTAATA+AGG | - | chr2_4:22997856-22997875 | Msa0321580:intron | 25.0% |
| !!! | TAATCTATATTTGTTGTTGG+GGG | + | chr2_4:22997991-22998010 | None:intergenic | 25.0% |
| ! | AGATTAAAGAAGAAATTGCA+AGG | - | chr2_4:22998005-22998024 | Msa0321580:intron | 25.0% |
| !! | CTATCCTTTAATTTCATTTC+AGG | - | chr2_4:22998343-22998362 | Msa0321580:five_prime_UTR | 25.0% |
| TGATATTGTTACCTACATGT+TGG | + | chr2_4:22996265-22996284 | None:intergenic | 30.0% | |
| TCACTTTGATTCAAGTATGA+AGG | - | chr2_4:22996291-22996310 | Msa0321580:CDS | 30.0% | |
| TGTTTACCTTGCTAATGTTT+GGG | + | chr2_4:22996534-22996553 | None:intergenic | 30.0% | |
| ATGTTTACCTTGCTAATGTT+TGG | + | chr2_4:22996535-22996554 | None:intergenic | 30.0% | |
| TTGATGTCTTTGACATCTAT+TGG | - | chr2_4:22996800-22996819 | Msa0321580:intron | 30.0% | |
| GGAAAATTTCAACCATCATA+TGG | - | chr2_4:22996821-22996840 | Msa0321580:intron | 30.0% | |
| ! | TAATTGAAGCTTTATCCATC+TGG | + | chr2_4:22996916-22996935 | None:intergenic | 30.0% |
| !! | GAGATAATGGAACTTGAATT+TGG | - | chr2_4:22996995-22997014 | Msa0321580:intron | 30.0% |
| AAAGTGGATAAAGTCTGATT+TGG | + | chr2_4:22997950-22997969 | None:intergenic | 30.0% | |
| ACACATGGAAGAGAATATAA+TGG | - | chr2_4:22998175-22998194 | Msa0321580:intron | 30.0% | |
| CACTCCTGAAATGAAATTAA+AGG | + | chr2_4:22998350-22998369 | None:intergenic | 30.0% | |
| ! | CTTTAATTTCATTTCAGGAG+TGG | - | chr2_4:22998348-22998367 | Msa0321580:five_prime_UTR | 30.0% |
| TGATATTGTTACCTACATGT+TGG | + | chr2_4:22996265-22996284 | None:intergenic | 30.0% | |
| TCACTTTGATTCAAGTATGA+AGG | - | chr2_4:22996291-22996310 | Msa0321580:CDS | 30.0% | |
| TGTTTACCTTGCTAATGTTT+GGG | + | chr2_4:22996534-22996553 | None:intergenic | 30.0% | |
| ATGTTTACCTTGCTAATGTT+TGG | + | chr2_4:22996535-22996554 | None:intergenic | 30.0% | |
| TTGATGTCTTTGACATCTAT+TGG | - | chr2_4:22996800-22996819 | Msa0321580:intron | 30.0% | |
| GGAAAATTTCAACCATCATA+TGG | - | chr2_4:22996821-22996840 | Msa0321580:intron | 30.0% | |
| ! | TAATTGAAGCTTTATCCATC+TGG | + | chr2_4:22996916-22996935 | None:intergenic | 30.0% |
| !! | GAGATAATGGAACTTGAATT+TGG | - | chr2_4:22996995-22997014 | Msa0321580:intron | 30.0% |
| AAAGTGGATAAAGTCTGATT+TGG | + | chr2_4:22997950-22997969 | None:intergenic | 30.0% | |
| ACACATGGAAGAGAATATAA+TGG | - | chr2_4:22998175-22998194 | Msa0321580:intron | 30.0% | |
| CACTCCTGAAATGAAATTAA+AGG | + | chr2_4:22998350-22998369 | None:intergenic | 30.0% | |
| ! | CTTTAATTTCATTTCAGGAG+TGG | - | chr2_4:22998348-22998367 | Msa0321580:five_prime_UTR | 30.0% |
| TTAACAACCATGGAGAACAT+TGG | - | chr2_4:22996213-22996232 | Msa0321580:CDS | 35.0% | |
| GGTTATTCAAGCTGAGATAA+TGG | - | chr2_4:22996982-22997001 | Msa0321580:intron | 35.0% | |
| !! | CTGATTTGTTCTCTTCTTCT+TGG | + | chr2_4:22997083-22997102 | None:intergenic | 35.0% |
| TTTACCTCAAGGACTTCAAT+TGG | + | chr2_4:22997136-22997155 | None:intergenic | 35.0% | |
| TTGAAGTCCTTGAGGTAAAT+TGG | - | chr2_4:22997137-22997156 | Msa0321580:intron | 35.0% | |
| AATGGTAGACCTTATTAAGG+TGG | + | chr2_4:22997868-22997887 | None:intergenic | 35.0% | |
| GCATCAATAATACAAGAGAG+AGG | + | chr2_4:22998036-22998055 | None:intergenic | 35.0% | |
| AAAATAAATGTGGGGTGTGA+TGG | - | chr2_4:22998060-22998079 | Msa0321580:CDS | 35.0% | |
| TGAGCATGACATGTAACAAA+AGG | - | chr2_4:22998201-22998220 | Msa0321580:intron | 35.0% | |
| GAGCATGACATGTAACAAAA+GGG | - | chr2_4:22998202-22998221 | Msa0321580:intron | 35.0% | |
| TTAACAACCATGGAGAACAT+TGG | - | chr2_4:22996213-22996232 | Msa0321580:CDS | 35.0% | |
| GGTTATTCAAGCTGAGATAA+TGG | - | chr2_4:22996982-22997001 | Msa0321580:intron | 35.0% | |
| !! | CTGATTTGTTCTCTTCTTCT+TGG | + | chr2_4:22997083-22997102 | None:intergenic | 35.0% |
| TTTACCTCAAGGACTTCAAT+TGG | + | chr2_4:22997136-22997155 | None:intergenic | 35.0% | |
| TTGAAGTCCTTGAGGTAAAT+TGG | - | chr2_4:22997137-22997156 | Msa0321580:intron | 35.0% | |
| AATGGTAGACCTTATTAAGG+TGG | + | chr2_4:22997868-22997887 | None:intergenic | 35.0% | |
| GCATCAATAATACAAGAGAG+AGG | + | chr2_4:22998036-22998055 | None:intergenic | 35.0% | |
| AAAATAAATGTGGGGTGTGA+TGG | - | chr2_4:22998060-22998079 | Msa0321580:CDS | 35.0% | |
| TGAGCATGACATGTAACAAA+AGG | - | chr2_4:22998201-22998220 | Msa0321580:intron | 35.0% | |
| GAGCATGACATGTAACAAAA+GGG | - | chr2_4:22998202-22998221 | Msa0321580:intron | 35.0% | |
| TATATGGTTGTGGTTGCAGT+TGG | - | chr2_4:22996362-22996381 | Msa0321580:CDS | 40.0% | |
| ATATGGTTGTGGTTGCAGTT+GGG | - | chr2_4:22996363-22996382 | Msa0321580:CDS | 40.0% | |
| ! | GATTGGATGAGGCTTTAACA+GGG | - | chr2_4:22996386-22996405 | Msa0321580:intron | 40.0% |
| GTATTATGATTCAAGCTCCG+CGG | - | chr2_4:22996408-22996427 | Msa0321580:intron | 40.0% | |
| CTAAGAACATTGTCTCTGAG+AGG | - | chr2_4:22996458-22996477 | Msa0321580:intron | 40.0% | |
| ! | GGTGACTTTCTTTTTCCAGA+TGG | - | chr2_4:22996898-22996917 | Msa0321580:intron | 40.0% |
| CTTTCCAATTGAAGTCCTTG+AGG | - | chr2_4:22997129-22997148 | Msa0321580:intron | 40.0% | |
| GAGATGATGATAGAGACAGT+GGG | + | chr2_4:22997163-22997182 | None:intergenic | 40.0% | |
| AGAGATGATGATAGAGACAG+TGG | + | chr2_4:22997164-22997183 | None:intergenic | 40.0% | |
| GGCAATGGTAGACCTTATTA+AGG | + | chr2_4:22997871-22997890 | None:intergenic | 40.0% | |
| ! | TTCTCTATTAGGGTACCTGA+TGG | + | chr2_4:22997897-22997916 | None:intergenic | 40.0% |
| !! | CTATATTTGTTGTTGGGGGT+TGG | + | chr2_4:22997987-22998006 | None:intergenic | 40.0% |
| TATATGGTTGAGTGCAGCTT+AGG | - | chr2_4:22998147-22998166 | Msa0321580:CDS | 40.0% | |
| ATATGGTTGAGTGCAGCTTA+GGG | - | chr2_4:22998148-22998167 | Msa0321580:CDS | 40.0% | |
| TAACAAAAGGGCAGACACAA+TGG | - | chr2_4:22998214-22998233 | Msa0321580:intron | 40.0% | |
| GCCAATATATCCTCTTTCTC+AGG | - | chr2_4:22998284-22998303 | Msa0321580:intron | 40.0% | |
| GCCTGAGAAAGAGGATATAT+TGG | + | chr2_4:22998288-22998307 | None:intergenic | 40.0% | |
| ATATATCCTCTTTCTCAGGC+AGG | - | chr2_4:22998288-22998307 | Msa0321580:CDS | 40.0% | |
| TTCGAAGACAGTCTTCATTG+AGG | - | chr2_4:22998313-22998332 | Msa0321580:exon | 40.0% | |
| TATATGGTTGTGGTTGCAGT+TGG | - | chr2_4:22996362-22996381 | Msa0321580:CDS | 40.0% | |
| ATATGGTTGTGGTTGCAGTT+GGG | - | chr2_4:22996363-22996382 | Msa0321580:CDS | 40.0% | |
| ! | GATTGGATGAGGCTTTAACA+GGG | - | chr2_4:22996386-22996405 | Msa0321580:intron | 40.0% |
| GTATTATGATTCAAGCTCCG+CGG | - | chr2_4:22996408-22996427 | Msa0321580:intron | 40.0% | |
| CTAAGAACATTGTCTCTGAG+AGG | - | chr2_4:22996458-22996477 | Msa0321580:intron | 40.0% | |
| ! | GGTGACTTTCTTTTTCCAGA+TGG | - | chr2_4:22996898-22996917 | Msa0321580:intron | 40.0% |
| CTTTCCAATTGAAGTCCTTG+AGG | - | chr2_4:22997129-22997148 | Msa0321580:intron | 40.0% | |
| GAGATGATGATAGAGACAGT+GGG | + | chr2_4:22997163-22997182 | None:intergenic | 40.0% | |
| AGAGATGATGATAGAGACAG+TGG | + | chr2_4:22997164-22997183 | None:intergenic | 40.0% | |
| GGCAATGGTAGACCTTATTA+AGG | + | chr2_4:22997871-22997890 | None:intergenic | 40.0% | |
| ! | TTCTCTATTAGGGTACCTGA+TGG | + | chr2_4:22997897-22997916 | None:intergenic | 40.0% |
| !! | CTATATTTGTTGTTGGGGGT+TGG | + | chr2_4:22997987-22998006 | None:intergenic | 40.0% |
| TATATGGTTGAGTGCAGCTT+AGG | - | chr2_4:22998147-22998166 | Msa0321580:CDS | 40.0% | |
| ATATGGTTGAGTGCAGCTTA+GGG | - | chr2_4:22998148-22998167 | Msa0321580:CDS | 40.0% | |
| TAACAAAAGGGCAGACACAA+TGG | - | chr2_4:22998214-22998233 | Msa0321580:intron | 40.0% | |
| GCCAATATATCCTCTTTCTC+AGG | - | chr2_4:22998284-22998303 | Msa0321580:intron | 40.0% | |
| GCCTGAGAAAGAGGATATAT+TGG | + | chr2_4:22998288-22998307 | None:intergenic | 40.0% | |
| ATATATCCTCTTTCTCAGGC+AGG | - | chr2_4:22998288-22998307 | Msa0321580:CDS | 40.0% | |
| TTCGAAGACAGTCTTCATTG+AGG | - | chr2_4:22998313-22998332 | Msa0321580:exon | 40.0% | |
| ! | TTACCTACATGTTGGTCTCC+CGG | + | chr2_4:22996257-22996276 | None:intergenic | 45.0% |
| TATGGTTGTGGTTGCAGTTG+GGG | - | chr2_4:22996364-22996383 | Msa0321580:CDS | 45.0% | |
| ! | GGATTGGATGAGGCTTTAAC+AGG | - | chr2_4:22996385-22996404 | Msa0321580:intron | 45.0% |
| ! | ACATTGTCTCTGAGAGGAAC+AGG | - | chr2_4:22996464-22996483 | Msa0321580:intron | 45.0% |
| AGTGGTCCCAAACATTAGCA+AGG | - | chr2_4:22996525-22996544 | Msa0321580:intron | 45.0% | |
| AGTCTTGCATGAGCAAGAGA+AGG | - | chr2_4:22996961-22996980 | Msa0321580:intron | 45.0% | |
| ! | AAGAGCTTCCTGTGTTGCTA+AGG | - | chr2_4:22997056-22997075 | Msa0321580:intron | 45.0% |
| TTCTTGGACCTTAGCAACAC+AGG | + | chr2_4:22997067-22997086 | None:intergenic | 45.0% | |
| ATCACTGAGCTCACAACTCA+TGG | - | chr2_4:22997300-22997319 | Msa0321580:intron | 45.0% | |
| ! | TATTAGGGTACCTGATGGTG+TGG | + | chr2_4:22997892-22997911 | None:intergenic | 45.0% |
| ! | TTACCTACATGTTGGTCTCC+CGG | + | chr2_4:22996257-22996276 | None:intergenic | 45.0% |
| TATGGTTGTGGTTGCAGTTG+GGG | - | chr2_4:22996364-22996383 | Msa0321580:CDS | 45.0% | |
| ! | GGATTGGATGAGGCTTTAAC+AGG | - | chr2_4:22996385-22996404 | Msa0321580:intron | 45.0% |
| ! | ACATTGTCTCTGAGAGGAAC+AGG | - | chr2_4:22996464-22996483 | Msa0321580:intron | 45.0% |
| AGTGGTCCCAAACATTAGCA+AGG | - | chr2_4:22996525-22996544 | Msa0321580:intron | 45.0% | |
| AGTCTTGCATGAGCAAGAGA+AGG | - | chr2_4:22996961-22996980 | Msa0321580:intron | 45.0% | |
| ! | AAGAGCTTCCTGTGTTGCTA+AGG | - | chr2_4:22997056-22997075 | Msa0321580:intron | 45.0% |
| TTCTTGGACCTTAGCAACAC+AGG | + | chr2_4:22997067-22997086 | None:intergenic | 45.0% | |
| ATCACTGAGCTCACAACTCA+TGG | - | chr2_4:22997300-22997319 | Msa0321580:intron | 45.0% | |
| ! | TATTAGGGTACCTGATGGTG+TGG | + | chr2_4:22997892-22997911 | None:intergenic | 45.0% |
| CTCAGCACCAATGTTCTCCA+TGG | + | chr2_4:22996223-22996242 | None:intergenic | 50.0% | |
| GTGCTGAGTACAACCCTTAC+CGG | - | chr2_4:22996235-22996254 | Msa0321580:CDS | 50.0% | |
| TGCTGAGTACAACCCTTACC+GGG | - | chr2_4:22996236-22996255 | Msa0321580:CDS | 50.0% | |
| ! | ACATGTTGGTCTCCCGGTAA+GGG | + | chr2_4:22996251-22996270 | None:intergenic | 50.0% |
| ! | TACATGTTGGTCTCCCGGTA+AGG | + | chr2_4:22996252-22996271 | None:intergenic | 50.0% |
| TTACCGGGAGACCAACATGT+AGG | - | chr2_4:22996251-22996270 | Msa0321580:CDS | 50.0% | |
| TTGTGGTTGCAGTTGGGGAT+TGG | - | chr2_4:22996369-22996388 | Msa0321580:CDS | 50.0% | |
| TTGCAGTTGGGGATTGGATG+AGG | - | chr2_4:22996375-22996394 | Msa0321580:intron | 50.0% | |
| TATGATTCAAGCTCCGCGGA+TGG | - | chr2_4:22996412-22996431 | Msa0321580:intron | 50.0% | |
| ! | TTGTCTCTGAGAGGAACAGG+AGG | - | chr2_4:22996467-22996486 | Msa0321580:intron | 50.0% |
| ACTCCTTGCACTTAGAGCAG+TGG | - | chr2_4:22996507-22996526 | Msa0321580:intron | 50.0% | |
| CAGTGGGCCAATTTACCTCA+AGG | + | chr2_4:22997147-22997166 | None:intergenic | 50.0% | |
| TCTACCATTGCCACACCATC+AGG | - | chr2_4:22997879-22997898 | Msa0321580:intron | 50.0% | |
| GCAGCTTAGGGTTACACACA+TGG | - | chr2_4:22998160-22998179 | Msa0321580:intron | 50.0% | |
| CTCAGCACCAATGTTCTCCA+TGG | + | chr2_4:22996223-22996242 | None:intergenic | 50.0% | |
| GTGCTGAGTACAACCCTTAC+CGG | - | chr2_4:22996235-22996254 | Msa0321580:CDS | 50.0% | |
| TGCTGAGTACAACCCTTACC+GGG | - | chr2_4:22996236-22996255 | Msa0321580:CDS | 50.0% | |
| ! | ACATGTTGGTCTCCCGGTAA+GGG | + | chr2_4:22996251-22996270 | None:intergenic | 50.0% |
| ! | TACATGTTGGTCTCCCGGTA+AGG | + | chr2_4:22996252-22996271 | None:intergenic | 50.0% |
| TTACCGGGAGACCAACATGT+AGG | - | chr2_4:22996251-22996270 | Msa0321580:CDS | 50.0% | |
| TTGTGGTTGCAGTTGGGGAT+TGG | - | chr2_4:22996369-22996388 | Msa0321580:CDS | 50.0% | |
| TTGCAGTTGGGGATTGGATG+AGG | - | chr2_4:22996375-22996394 | Msa0321580:intron | 50.0% | |
| TATGATTCAAGCTCCGCGGA+TGG | - | chr2_4:22996412-22996431 | Msa0321580:intron | 50.0% | |
| ! | TTGTCTCTGAGAGGAACAGG+AGG | - | chr2_4:22996467-22996486 | Msa0321580:intron | 50.0% |
| ACTCCTTGCACTTAGAGCAG+TGG | - | chr2_4:22996507-22996526 | Msa0321580:intron | 50.0% | |
| CAGTGGGCCAATTTACCTCA+AGG | + | chr2_4:22997147-22997166 | None:intergenic | 50.0% | |
| TCTACCATTGCCACACCATC+AGG | - | chr2_4:22997879-22997898 | Msa0321580:intron | 50.0% | |
| GCAGCTTAGGGTTACACACA+TGG | - | chr2_4:22998160-22998179 | Msa0321580:intron | 50.0% | |
| ! | TGATGATGCTGCACCATCCG+CGG | + | chr2_4:22996428-22996447 | None:intergenic | 55.0% |
| ! | GGACCACTGCTCTAAGTGCA+AGG | + | chr2_4:22996513-22996532 | None:intergenic | 55.0% |
| ! | GGTACCTGATGGTGTGGCAA+TGG | + | chr2_4:22997886-22997905 | None:intergenic | 55.0% |
| CGAAAGCCTGCCTGAGAAAG+AGG | + | chr2_4:22998297-22998316 | None:intergenic | 55.0% | |
| ! | TGATGATGCTGCACCATCCG+CGG | + | chr2_4:22996428-22996447 | None:intergenic | 55.0% |
| ! | GGACCACTGCTCTAAGTGCA+AGG | + | chr2_4:22996513-22996532 | None:intergenic | 55.0% |
| ! | GGTACCTGATGGTGTGGCAA+TGG | + | chr2_4:22997886-22997905 | None:intergenic | 55.0% |
| CGAAAGCCTGCCTGAGAAAG+AGG | + | chr2_4:22998297-22998316 | None:intergenic | 55.0% | |
| GCGGATGGTGCAGCATCATC+AGG | - | chr2_4:22996427-22996446 | Msa0321580:intron | 60.0% | |
| GCGGATGGTGCAGCATCATC+AGG | - | chr2_4:22996427-22996446 | Msa0321580:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 22996150 | 22998403 | 22996150 | ID=Msa0321580;Name=Msa0321580 |
| chr2_4 | mRNA | 22996150 | 22998403 | 22996150 | ID=Msa0321580-mRNA-1;Parent=Msa0321580;Name=Msa0321580-mRNA-1;_AED=0.07;_eAED=0.07;_QI=72|1|0.75|1|1|1|4|0|228 |
| chr2_4 | exon | 22996150 | 22996389 | 22996150 | ID=Msa0321580-mRNA-1:exon:8452;Parent=Msa0321580-mRNA-1 |
| chr2_4 | exon | 22997403 | 22997636 | 22997403 | ID=Msa0321580-mRNA-1:exon:8451;Parent=Msa0321580-mRNA-1 |
| chr2_4 | exon | 22998007 | 22998172 | 22998007 | ID=Msa0321580-mRNA-1:exon:8450;Parent=Msa0321580-mRNA-1 |
| chr2_4 | exon | 22998285 | 22998403 | 22998285 | ID=Msa0321580-mRNA-1:exon:8449;Parent=Msa0321580-mRNA-1 |
| chr2_4 | five_prime_UTR | 22998332 | 22998403 | 22998332 | ID=Msa0321580-mRNA-1:five_prime_utr;Parent=Msa0321580-mRNA-1 |
| chr2_4 | CDS | 22998285 | 22998331 | 22998285 | ID=Msa0321580-mRNA-1:cds;Parent=Msa0321580-mRNA-1 |
| chr2_4 | CDS | 22998007 | 22998172 | 22998007 | ID=Msa0321580-mRNA-1:cds;Parent=Msa0321580-mRNA-1 |
| chr2_4 | CDS | 22997403 | 22997636 | 22997403 | ID=Msa0321580-mRNA-1:cds;Parent=Msa0321580-mRNA-1 |
| chr2_4 | CDS | 22996150 | 22996389 | 22996150 | ID=Msa0321580-mRNA-1:cds;Parent=Msa0321580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
