Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326700 | XP_003595632.2 | 97.026 | 269 | 8 | 0 | 4 | 272 | 3 | 271 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326700 | sp|Q1G3U6|PCO3_ARATH | 57.818 | 275 | 105 | 6 | 3 | 272 | 14 | 282 | 5.59e-114 | 332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326700 | G7IQJ9 | 97.026 | 269 | 8 | 0 | 4 | 272 | 3 | 271 | 0.0 | 549 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0209150 | Msa0326700 | 0.991024 | 1.666017e-185 | -8.615850e-47 |
| Msa0220750 | Msa0326700 | -0.807812 | 4.210073e-50 | -8.615850e-47 |
| Msa0326700 | Msa0745250 | 0.831844 | 1.326024e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326700 | MtrunA17_Chr2g0307681 | 97.026 | 269 | 8 | 0 | 4 | 272 | 3 | 271 | 0.0 | 549 |
| Msa0326700 | MtrunA17_Chr6g0460971 | 46.559 | 247 | 117 | 6 | 26 | 270 | 55 | 288 | 1.78e-72 | 224 |
| Msa0326700 | MtrunA17_Chr7g0253891 | 42.701 | 274 | 136 | 9 | 1 | 270 | 22 | 278 | 4.39e-70 | 217 |
| Msa0326700 | MtrunA17_Chr6g0452941 | 46.000 | 250 | 113 | 7 | 29 | 270 | 41 | 276 | 6.30e-68 | 212 |
| Msa0326700 | MtrunA17_Chr7g0216881 | 43.902 | 246 | 119 | 6 | 25 | 266 | 41 | 271 | 5.15e-63 | 199 |
| Msa0326700 | MtrunA17_Chr2g0320221 | 43.673 | 245 | 124 | 6 | 29 | 271 | 5 | 237 | 5.23e-61 | 192 |
| Msa0326700 | MtrunA17_Chr2g0283961 | 41.509 | 265 | 106 | 10 | 29 | 271 | 4 | 241 | 9.18e-60 | 189 |
| Msa0326700 | MtrunA17_Chr4g0041281 | 40.873 | 252 | 122 | 7 | 29 | 271 | 5 | 238 | 6.45e-58 | 185 |
| Msa0326700 | MtrunA17_Chr5g0426531 | 40.964 | 249 | 124 | 5 | 25 | 270 | 2 | 230 | 3.54e-54 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326700 | AT1G18490.1 | 57.818 | 275 | 105 | 6 | 3 | 272 | 14 | 282 | 5.69e-115 | 332 |
| Msa0326700 | AT5G39890.1 | 44.715 | 246 | 116 | 6 | 29 | 271 | 47 | 275 | 1.81e-68 | 213 |
| Msa0326700 | AT5G15120.1 | 43.083 | 253 | 120 | 7 | 27 | 271 | 56 | 292 | 1.80e-62 | 199 |
| Msa0326700 | AT5G39890.2 | 46.860 | 207 | 92 | 5 | 29 | 234 | 47 | 236 | 1.73e-59 | 189 |
| Msa0326700 | AT3G58670.2 | 40.891 | 247 | 132 | 7 | 29 | 271 | 5 | 241 | 8.22e-56 | 180 |
| Msa0326700 | AT3G58670.3 | 40.891 | 247 | 132 | 7 | 29 | 271 | 5 | 241 | 8.22e-56 | 180 |
| Msa0326700 | AT3G58670.1 | 40.891 | 247 | 132 | 7 | 29 | 271 | 5 | 241 | 8.22e-56 | 180 |
| Msa0326700 | AT2G42670.1 | 42.276 | 246 | 129 | 9 | 29 | 271 | 5 | 240 | 2.89e-55 | 178 |
| Msa0326700 | AT2G42670.2 | 41.870 | 246 | 131 | 9 | 29 | 271 | 5 | 241 | 9.16e-55 | 177 |
| Msa0326700 | AT3G58670.4 | 44.571 | 175 | 91 | 4 | 99 | 271 | 28 | 198 | 2.38e-46 | 154 |
| Msa0326700 | AT2G42670.3 | 45.963 | 161 | 79 | 6 | 114 | 271 | 18 | 173 | 6.20e-41 | 139 |
Find 66 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATAAATGTTGTAATTT+TGG | 0.060053 | 2_4:-37401774 | None:intergenic |
| AATCTTGAACCTTAGAGTTT+TGG | 0.272644 | 2_4:-37401875 | None:intergenic |
| CACAAACTTTCTTCAATTCT+CGG | 0.282207 | 2_4:+37401963 | Msa0326700:CDS |
| TACTTACAGAATGTTGAATA+AGG | 0.328210 | 2_4:-37405365 | None:intergenic |
| CTTCCTTCATATTCTTTGTA+AGG | 0.334390 | 2_4:-37405317 | None:intergenic |
| TCCTTTAGCCCAACATCAAC+TGG | 0.353434 | 2_4:-37403599 | None:intergenic |
| TGAATGTCCACATATGTTAT+CGG | 0.366942 | 2_4:-37403698 | None:intergenic |
| TTGCTAAATACGGTCATTCC+AGG | 0.370103 | 2_4:-37404273 | None:intergenic |
| TCCCTTGCTTTCTACGATGC+AGG | 0.372402 | 2_4:-37404346 | None:intergenic |
| TTGTGCAAAGCTTGAGAAGA+AGG | 0.375222 | 2_4:-37401945 | None:intergenic |
| AGAATGGATGGTATTATTGT+TGG | 0.377269 | 2_4:+37406741 | Msa0326700:three_prime_UTR |
| GGATCTGCAGCAGCAGGAAA+TGG | 0.399793 | 2_4:+37406563 | Msa0326700:intron |
| TATGAAGCACCAAAACTCTA+AGG | 0.412766 | 2_4:+37401866 | Msa0326700:CDS |
| ACCAGTTGATGTTGGGCTAA+AGG | 0.414927 | 2_4:+37403598 | Msa0326700:CDS |
| TGAATATTTCCACCACGGTT+TGG | 0.415229 | 2_4:-37405245 | None:intergenic |
| CTATTCATATAAAGATTACT+AGG | 0.415622 | 2_4:-37406638 | None:intergenic |
| GGCAAAGTTAGCAGTTGATA+AGG | 0.419732 | 2_4:+37405187 | Msa0326700:CDS |
| GCAGACGATGATCGAGGGCT+TGG | 0.422778 | 2_4:+37403629 | Msa0326700:CDS |
| CCCTTGCTTTCTACGATGCA+GGG | 0.439792 | 2_4:-37404345 | None:intergenic |
| CTATTAAACCAGTTGATGTT+GGG | 0.439890 | 2_4:+37403591 | Msa0326700:CDS |
| TACATGTGAAAGCTTATGAC+TGG | 0.450198 | 2_4:+37404313 | Msa0326700:CDS |
| TTTCATTGTTGCAGTAAGAC+TGG | 0.467606 | 2_4:+37405166 | Msa0326700:intron |
| GTGGAATAACTGAAGAAGTT+GGG | 0.468762 | 2_4:-37404239 | None:intergenic |
| AGTAATCTTTATATGAATAG+TGG | 0.490002 | 2_4:+37406641 | Msa0326700:CDS |
| GTACAGAAGTTTGCTAAATA+CGG | 0.494996 | 2_4:-37404283 | None:intergenic |
| ACTATTAAACCAGTTGATGT+TGG | 0.498236 | 2_4:+37403590 | Msa0326700:CDS |
| CCTTCATATTCTTTGTAAGG+AGG | 0.504841 | 2_4:-37405314 | None:intergenic |
| AGTGGAATAACTGAAGAAGT+TGG | 0.509668 | 2_4:-37404240 | None:intergenic |
| CAGAGCTAAAGCTTTAAAGC+TGG | 0.510020 | 2_4:-37406677 | None:intergenic |
| TTCTTGTGTAAAAGAATGGA+TGG | 0.512955 | 2_4:+37406729 | Msa0326700:three_prime_UTR |
| CGGTCATTCCAGGATGGTCG+TGG | 0.518160 | 2_4:-37404263 | None:intergenic |
| GAAGGAGAGGGTATTCGAGA+GGG | 0.539442 | 2_4:-37401927 | None:intergenic |
| CCTCCTTACAAAGAATATGA+AGG | 0.541969 | 2_4:+37405314 | Msa0326700:CDS |
| ATTCCACTCCACGACCATCC+TGG | 0.548171 | 2_4:+37404255 | Msa0326700:CDS |
| AGTAACACCTTGTGCCATGC+TGG | 0.552124 | 2_4:+37405280 | Msa0326700:CDS |
| AGAAGGAGAGGGTATTCGAG+AGG | 0.563490 | 2_4:-37401928 | None:intergenic |
| ATCGTAGAAAGCAAGGGACC+AGG | 0.571016 | 2_4:+37404351 | Msa0326700:CDS |
| AACTGAGTAGAGTAGCTCGA+TGG | 0.572729 | 2_4:+37403669 | Msa0326700:CDS |
| GGCTAAGCCGATAACATATG+TGG | 0.574054 | 2_4:+37403691 | Msa0326700:CDS |
| ACCCTGCATCGTAGAAAGCA+AGG | 0.581412 | 2_4:+37404344 | Msa0326700:CDS |
| GTATTTAGCAAACTTCTGTA+CGG | 0.582160 | 2_4:+37404285 | Msa0326700:CDS |
| CTTACAAAGAATATGAAGGA+AGG | 0.584870 | 2_4:+37405318 | Msa0326700:CDS |
| GTTATACCTTGAGCATGTCC+TGG | 0.591297 | 2_4:-37404369 | None:intergenic |
| ATCGAGCTACTCTACTCAGT+TGG | 0.601211 | 2_4:-37403667 | None:intergenic |
| CAAAGCTTGAGAAGAAGGAG+AGG | 0.602581 | 2_4:-37401940 | None:intergenic |
| ATTCCAGGATGGTCGTGGAG+TGG | 0.604414 | 2_4:-37404258 | None:intergenic |
| ATGAATAGTGGTGTATATGC+TGG | 0.608159 | 2_4:+37406653 | Msa0326700:CDS |
| ACTGAGTAGAGTAGCTCGAT+GGG | 0.614850 | 2_4:+37403670 | Msa0326700:CDS |
| ATCTATATGTGATGGTGAAG+AGG | 0.617898 | 2_4:+37406586 | Msa0326700:CDS |
| TGAATATGCTTGGCTTGCAG+AGG | 0.619118 | 2_4:+37406610 | Msa0326700:CDS |
| GTGAAGAGGATGAATATGCT+TGG | 0.619635 | 2_4:+37406600 | Msa0326700:CDS |
| AAGCTGCAGACGATGATCGA+GGG | 0.621450 | 2_4:+37403624 | Msa0326700:CDS |
| AGGTGCGAGAACGTCCAGCA+TGG | 0.623380 | 2_4:-37405294 | None:intergenic |
| AGAACGTCCAGCATGGCACA+AGG | 0.628704 | 2_4:-37405287 | None:intergenic |
| GAAGCTGCAGACGATGATCG+AGG | 0.636302 | 2_4:+37403623 | Msa0326700:CDS |
| AAGGGACCAGGACATGCTCA+AGG | 0.639003 | 2_4:+37404363 | Msa0326700:CDS |
| AACAGTGAATATTTCCACCA+CGG | 0.639958 | 2_4:-37405250 | None:intergenic |
| AGTTGATGTTGGGCTAAAGG+AGG | 0.645564 | 2_4:+37403601 | Msa0326700:CDS |
| CCCTGCATCGTAGAAAGCAA+GGG | 0.655648 | 2_4:+37404345 | Msa0326700:CDS |
| ACATGTGAAAGCTTATGACT+GGG | 0.657723 | 2_4:+37404314 | Msa0326700:CDS |
| TAAATACGGTCATTCCAGGA+TGG | 0.667422 | 2_4:-37404269 | None:intergenic |
| ACTTGTACAGAACAAGAACA+TGG | 0.670609 | 2_4:+37401815 | Msa0326700:CDS |
| GGAAATGGATCTATATGTGA+TGG | 0.678954 | 2_4:+37406578 | Msa0326700:CDS |
| AAAGCTTGAGAAGAAGGAGA+GGG | 0.689346 | 2_4:-37401939 | None:intergenic |
| TTGCTTTCTACGATGCAGGG+TGG | 0.704355 | 2_4:-37404342 | None:intergenic |
| TATAAAACTGATGTTTCACA+TGG | 0.754209 | 2_4:-37405221 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATAAATAATCTATCA+CGG | + | chr2_4:37403441-37403460 | Msa0326700:intron | 10.0% |
| !!! | ATTTTAAATAAAGATATTAG+TGG | - | chr2_4:37405560-37405579 | None:intergenic | 10.0% |
| !!! | TTCTTGTTATAATATTTTAT+CGG | + | chr2_4:37406330-37406349 | Msa0326700:intron | 10.0% |
| !!! | GATAATAAATGTTGTAATTT+TGG | - | chr2_4:37401777-37401796 | None:intergenic | 15.0% |
| !!! | AAAAGAGAAATTTAGTTTTA+TGG | + | chr2_4:37402000-37402019 | Msa0326700:intron | 15.0% |
| !!! | AAAGAGAAATTTAGTTTTAT+GGG | + | chr2_4:37402001-37402020 | Msa0326700:intron | 15.0% |
| !! | GAACTATTTATTATATTCTA+TGG | + | chr2_4:37403068-37403087 | Msa0326700:intron | 15.0% |
| !! | TCTTATGAAAAGTTTATTTA+TGG | + | chr2_4:37403251-37403270 | Msa0326700:intron | 15.0% |
| !! | AAGGGAATTATAAATTAAAT+TGG | + | chr2_4:37404882-37404901 | Msa0326700:intron | 15.0% |
| !!! | AACTTTTATGAGTTATTGTT+TGG | + | chr2_4:37402160-37402179 | Msa0326700:intron | 20.0% |
| !! | TTTATTATATTCTATGGATC+AGG | + | chr2_4:37403074-37403093 | Msa0326700:intron | 20.0% |
| !!! | TACTTTAAGAATAAAATCGA+AGG | + | chr2_4:37403119-37403138 | Msa0326700:intron | 20.0% |
| !!! | TCTAGCTTTCTTATTAAAAA+AGG | + | chr2_4:37403207-37403226 | Msa0326700:intron | 20.0% |
| !! | CTTTCTTATTAAAAAAGGTT+GGG | + | chr2_4:37403212-37403231 | Msa0326700:intron | 20.0% |
| !! | ATAATCAGAGAATATGATAT+TGG | + | chr2_4:37403327-37403346 | Msa0326700:intron | 20.0% |
| !! | CAGATTATATAACTTATTGT+GGG | - | chr2_4:37403879-37403898 | None:intergenic | 20.0% |
| !!! | GGATATAATTTGAAACATTT+TGG | - | chr2_4:37404548-37404567 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTCTTTTCGAAAT+TGG | + | chr2_4:37404855-37404874 | Msa0326700:intron | 20.0% |
| !! | CATTATCGAATATAATATTC+AGG | + | chr2_4:37405028-37405047 | Msa0326700:intron | 20.0% |
| !! | ATTTATATCAAACAGTAATC+TGG | + | chr2_4:37405411-37405430 | Msa0326700:intron | 20.0% |
| !! | AATAAAGATGTTATGAAACA+CGG | - | chr2_4:37406518-37406537 | None:intergenic | 20.0% |
| !! | CTATTCATATAAAGATTACT+AGG | - | chr2_4:37406641-37406660 | None:intergenic | 20.0% |
| !! | AGTAATCTTTATATGAATAG+TGG | + | chr2_4:37406641-37406660 | Msa0326700:CDS | 20.0% |
| !!! | TATTTTCTTGTGTAAAAGAA+TGG | + | chr2_4:37406725-37406744 | Msa0326700:three_prime_UTR | 20.0% |
| !!! | TTTATGGGTATTTTAAGTGT+TGG | + | chr2_4:37402016-37402035 | Msa0326700:intron | 25.0% |
| ! | CATATGGAAAAACATTTGTT+GGG | + | chr2_4:37402604-37402623 | Msa0326700:intron | 25.0% |
| ! | ACCTTGGTTTACAAAAAAAA+CGG | + | chr2_4:37402690-37402709 | Msa0326700:intron | 25.0% |
| ! | ATCAGATTAGAAAGTAATTG+AGG | + | chr2_4:37403028-37403047 | Msa0326700:intron | 25.0% |
| ! | ATCGAAGGTTTATTCTTTAT+TGG | + | chr2_4:37403134-37403153 | Msa0326700:intron | 25.0% |
| ! | TCGAAGGTTTATTCTTTATT+GGG | + | chr2_4:37403135-37403154 | Msa0326700:intron | 25.0% |
| ! | GCTTTCTTATTAAAAAAGGT+TGG | + | chr2_4:37403211-37403230 | Msa0326700:intron | 25.0% |
| !!! | CTGTTAATGTTTAACTTGTT+TGG | + | chr2_4:37403354-37403373 | Msa0326700:intron | 25.0% |
| !! | GTCTGTATTTTCATATGAAA+TGG | - | chr2_4:37403467-37403486 | None:intergenic | 25.0% |
| ! | AGTATTTATGATTCATGACT+CGG | + | chr2_4:37403562-37403581 | Msa0326700:intron | 25.0% |
| !!! | TCATGAATCTGATAGTTTTA+CGG | + | chr2_4:37403718-37403737 | Msa0326700:CDS | 25.0% |
| ! | GCAGATTATATAACTTATTG+TGG | - | chr2_4:37403880-37403899 | None:intergenic | 25.0% |
| ! | ATAAGTTATATAATCTGCCA+TGG | + | chr2_4:37403882-37403901 | Msa0326700:intron | 25.0% |
| ! | ATCGAGTAAATACAATATAC+AGG | - | chr2_4:37404394-37404413 | None:intergenic | 25.0% |
| !! | TTGGTGTAAAAAAGGTATAA+GGG | + | chr2_4:37404586-37404605 | Msa0326700:intron | 25.0% |
| ! | AATCAGTATAAACCAAAACA+TGG | - | chr2_4:37404811-37404830 | None:intergenic | 25.0% |
| !!! | ATGTTTTGGTTTATACTGAT+TGG | + | chr2_4:37404810-37404829 | Msa0326700:intron | 25.0% |
| !!! | TGTTTTGGTTTATACTGATT+GGG | + | chr2_4:37404811-37404830 | Msa0326700:intron | 25.0% |
| ! | AGGGTTTATATCATTAAACA+TGG | - | chr2_4:37405089-37405108 | None:intergenic | 25.0% |
| ! | ACAATGAAAAAACAAAACCA+TGG | - | chr2_4:37405155-37405174 | None:intergenic | 25.0% |
| ! | TATAAAACTGATGTTTCACA+TGG | - | chr2_4:37405224-37405243 | None:intergenic | 25.0% |
| ! | TACTTACAGAATGTTGAATA+AGG | - | chr2_4:37405368-37405387 | None:intergenic | 25.0% |
| ! | ATGAATAGTAAGGCTAATAT+AGG | - | chr2_4:37405587-37405606 | None:intergenic | 25.0% |
| !!! | TGCTTAATTTATTTTCGTGT+TGG | - | chr2_4:37405886-37405905 | None:intergenic | 25.0% |
| !!! | TGCTTAATTTATTTTCGTGT+TGG | - | chr2_4:37405886-37405905 | None:intergenic | 25.0% |
| ! | AGTACATATAGTAGAAAAGA+TGG | + | chr2_4:37406064-37406083 | Msa0326700:intron | 25.0% |
| ! | TAATGAGCTGCATAAAAATA+TGG | + | chr2_4:37406241-37406260 | Msa0326700:intron | 25.0% |
| ! | ACAAGTTTATCATACTAAGT+GGG | - | chr2_4:37406311-37406330 | None:intergenic | 25.0% |
| ! | AACAAGTTTATCATACTAAG+TGG | - | chr2_4:37406312-37406331 | None:intergenic | 25.0% |
| !! | TATTTTATCGGAGATATAGT+AGG | + | chr2_4:37406342-37406361 | Msa0326700:intron | 25.0% |
| ! | GTTTTTCTTTTTACTGTGGT+CGG | - | chr2_4:37401742-37401761 | None:intergenic | 30.0% |
| !!! | TCTGGTTTTTCTTTTTACTG+TGG | - | chr2_4:37401746-37401765 | None:intergenic | 30.0% |
| !!! | GTAATTTTGGAACTCATTTC+TGG | - | chr2_4:37401764-37401783 | None:intergenic | 30.0% |
| ! | AATCTTGAACCTTAGAGTTT+TGG | - | chr2_4:37401878-37401897 | None:intergenic | 30.0% |
| CACAAACTTTCTTCAATTCT+CGG | + | chr2_4:37401963-37401982 | Msa0326700:CDS | 30.0% | |
| TGTTTGTGTTAATGACTCTT+TGG | + | chr2_4:37402044-37402063 | Msa0326700:intron | 30.0% | |
| TAATGACTCTTTGGATTGTT+TGG | + | chr2_4:37402053-37402072 | Msa0326700:intron | 30.0% | |
| ATCGTCTATCCTTAGTTAAA+AGG | + | chr2_4:37402196-37402215 | Msa0326700:intron | 30.0% | |
| ACATCTAAAAGTTTCTACCA+AGG | - | chr2_4:37402224-37402243 | None:intergenic | 30.0% | |
| ! | GTAGAAACTTTTAGATGTTC+CGG | + | chr2_4:37402226-37402245 | Msa0326700:intron | 30.0% |
| TTCAGTGTAATTATATGTGC+CGG | - | chr2_4:37402318-37402337 | None:intergenic | 30.0% | |
| AGCTATGGTAAAAACTGTAA+GGG | - | chr2_4:37402489-37402508 | None:intergenic | 30.0% | |
| TAGCTATGGTAAAAACTGTA+AGG | - | chr2_4:37402490-37402509 | None:intergenic | 30.0% | |
| ! | CAGTTTTTACCATAGCTAAA+AGG | + | chr2_4:37402492-37402511 | Msa0326700:intron | 30.0% |
| ACATAGGTTTCTTAACCATT+TGG | + | chr2_4:37402556-37402575 | Msa0326700:intron | 30.0% | |
| ! | AAATGTTTTTCCATATGCAC+CGG | - | chr2_4:37402601-37402620 | None:intergenic | 30.0% |
| GCATATGGAAAAACATTTGT+TGG | + | chr2_4:37402603-37402622 | Msa0326700:intron | 30.0% | |
| GGTTACTGATATCCATTTAA+GGG | - | chr2_4:37402633-37402652 | None:intergenic | 30.0% | |
| AGGTTACTGATATCCATTTA+AGG | - | chr2_4:37402634-37402653 | None:intergenic | 30.0% | |
| !! | TTGAGGATATAATGGGTTAA+AGG | + | chr2_4:37402814-37402833 | Msa0326700:intron | 30.0% |
| !! | TGAGGATATAATGGGTTAAA+GGG | + | chr2_4:37402815-37402834 | Msa0326700:intron | 30.0% |
| AACTAAGAACAAAACCATCA+GGG | - | chr2_4:37402915-37402934 | None:intergenic | 30.0% | |
| TAACTAAGAACAAAACCATC+AGG | - | chr2_4:37402916-37402935 | None:intergenic | 30.0% | |
| !!! | TGGTTTTGTTCTTAGTTACA+AGG | + | chr2_4:37402918-37402937 | Msa0326700:intron | 30.0% |
| CGAAGGTTTATTCTTTATTG+GGG | + | chr2_4:37403136-37403155 | Msa0326700:intron | 30.0% | |
| ! | AACAGCGAAAGCTAATTTTT+CGG | - | chr2_4:37403183-37403202 | None:intergenic | 30.0% |
| ! | AGTGACATAAAATCTAGTTC+CGG | - | chr2_4:37403287-37403306 | None:intergenic | 30.0% |
| ! | AAGCTTTTACTCTGATTCTT+AGG | + | chr2_4:37403417-37403436 | Msa0326700:intron | 30.0% |
| !!! | TGTTACGTTATTTTGAGTAG+TGG | + | chr2_4:37403525-37403544 | Msa0326700:intron | 30.0% |
| ! | ACTATTAAACCAGTTGATGT+TGG | + | chr2_4:37403590-37403609 | Msa0326700:CDS | 30.0% |
| ! | CTATTAAACCAGTTGATGTT+GGG | + | chr2_4:37403591-37403610 | Msa0326700:CDS | 30.0% |
| TGAATGTCCACATATGTTAT+CGG | - | chr2_4:37403701-37403720 | None:intergenic | 30.0% | |
| GGAAAACAAAAAACTATGAG+TGG | - | chr2_4:37403858-37403877 | None:intergenic | 30.0% | |
| TGACATGGTAAATCTTCATT+AGG | - | chr2_4:37404063-37404082 | None:intergenic | 30.0% | |
| !! | GTCTTGTTATTACGTTAATC+CGG | + | chr2_4:37404110-37404129 | Msa0326700:intron | 30.0% |
| !! | GTACAGAAGTTTGCTAAATA+CGG | - | chr2_4:37404286-37404305 | None:intergenic | 30.0% |
| GTATTTAGCAAACTTCTGTA+CGG | + | chr2_4:37404285-37404304 | Msa0326700:CDS | 30.0% | |
| ATGAGTGTGTATTATCCTTT+GGG | + | chr2_4:37404511-37404530 | Msa0326700:intron | 30.0% | |
| TTGGTAAAATAACATCCCAA+AGG | - | chr2_4:37404529-37404548 | None:intergenic | 30.0% | |
| TTTCAAATTATATCCTCCCT+TGG | + | chr2_4:37404553-37404572 | Msa0326700:intron | 30.0% | |
| ! | GTTGGTGTAAAAAAGGTATA+AGG | + | chr2_4:37404585-37404604 | Msa0326700:intron | 30.0% |
| ! | TGGTGTAAAAAAGGTATAAG+GGG | + | chr2_4:37404587-37404606 | Msa0326700:intron | 30.0% |
| TTTATCTGACATTGCATGTA+TGG | + | chr2_4:37404671-37404690 | Msa0326700:intron | 30.0% | |
| AGTTTGCAACAATTTCCATT+AGG | - | chr2_4:37404707-37404726 | None:intergenic | 30.0% | |
| ! | ACTTTCATTATGCCATGTTT+TGG | + | chr2_4:37404796-37404815 | Msa0326700:intron | 30.0% |
| ! | TCTTTTCGAAATTGGAGAAA+AGG | + | chr2_4:37404863-37404882 | Msa0326700:intron | 30.0% |
| ! | CTTTTCGAAATTGGAGAAAA+GGG | + | chr2_4:37404864-37404883 | Msa0326700:intron | 30.0% |
| ACTCAGAACTTGAAGTTATA+TGG | + | chr2_4:37404945-37404964 | Msa0326700:intron | 30.0% | |
| CTGAGTTAATACCTCATAAA+CGG | + | chr2_4:37404982-37405001 | Msa0326700:intron | 30.0% | |
| AAATAGGGATGAAAAAGGAA+GGG | - | chr2_4:37405108-37405127 | None:intergenic | 30.0% | |
| AAAATAGGGATGAAAAAGGA+AGG | - | chr2_4:37405109-37405128 | None:intergenic | 30.0% | |
| !! | TTCCTTTTTCATCCCTATTT+TGG | + | chr2_4:37405108-37405127 | Msa0326700:intron | 30.0% |
| TTCCAAAATAGGGATGAAAA+AGG | - | chr2_4:37405113-37405132 | None:intergenic | 30.0% | |
| CTTCCTTCATATTCTTTGTA+AGG | - | chr2_4:37405320-37405339 | None:intergenic | 30.0% | |
| CTTACAAAGAATATGAAGGA+AGG | + | chr2_4:37405318-37405337 | Msa0326700:CDS | 30.0% | |
| !! | ATGAGACAAATGTTCTAAAG+AGG | - | chr2_4:37405491-37405510 | None:intergenic | 30.0% |
| AGACTTTGATTCATGTCATA+GGG | - | chr2_4:37405682-37405701 | None:intergenic | 30.0% | |
| TAGACTTTGATTCATGTCAT+AGG | - | chr2_4:37405683-37405702 | None:intergenic | 30.0% | |
| GGGAAAATCTTATCGAAAAA+CGG | + | chr2_4:37405816-37405835 | Msa0326700:intron | 30.0% | |
| TAGAGATTAGAATGTTGTGT+TGG | + | chr2_4:37405909-37405928 | Msa0326700:intron | 30.0% | |
| TAGAGATTAGAATGTTGTGT+TGG | + | chr2_4:37405909-37405928 | Msa0326700:intron | 30.0% | |
| ACGACATTAGATACATAGTT+GGG | + | chr2_4:37406039-37406058 | Msa0326700:intron | 30.0% | |
| ACATATAGTAGAAAAGATGG+CGG | + | chr2_4:37406067-37406086 | Msa0326700:intron | 30.0% | |
| CAAGTTTATCATACTAAGTG+GGG | - | chr2_4:37406310-37406329 | None:intergenic | 30.0% | |
| ! | ATAGTAGGTTAGTTACTAGT+TGG | + | chr2_4:37406357-37406376 | Msa0326700:intron | 30.0% |
| ACTACCTTAAGCCTATTTAT+AGG | - | chr2_4:37406406-37406425 | None:intergenic | 30.0% | |
| TTCTTGTGTAAAAGAATGGA+TGG | + | chr2_4:37406729-37406748 | Msa0326700:three_prime_UTR | 30.0% | |
| AGAATGGATGGTATTATTGT+TGG | + | chr2_4:37406741-37406760 | Msa0326700:three_prime_UTR | 30.0% | |
| ACTTGTACAGAACAAGAACA+TGG | + | chr2_4:37401815-37401834 | Msa0326700:CDS | 35.0% | |
| ! | TATGAAGCACCAAAACTCTA+AGG | + | chr2_4:37401866-37401885 | Msa0326700:CDS | 35.0% |
| !!! | GAGAGAAAGTGTTTTTACAG+TGG | - | chr2_4:37401908-37401927 | None:intergenic | 35.0% |
| GCTGAACTTTGTAATATGAG+TGG | + | chr2_4:37402113-37402132 | Msa0326700:intron | 35.0% | |
| ACTAAGGATAGACGATTTAC+AGG | - | chr2_4:37402192-37402211 | None:intergenic | 35.0% | |
| GTTTGTGCTTCATAATTCGA+GGG | - | chr2_4:37402260-37402279 | None:intergenic | 35.0% | |
| TGTTTGTGCTTCATAATTCG+AGG | - | chr2_4:37402261-37402280 | None:intergenic | 35.0% | |
| TATTAGCAATGTCTGTGTGT+CGG | + | chr2_4:37402357-37402376 | Msa0326700:intron | 35.0% | |
| !! | GGGCTTAAAAAGTTCTAAAG+AGG | - | chr2_4:37402469-37402488 | None:intergenic | 35.0% |
| ACAAGTGGTAGTAGATACAT+AGG | + | chr2_4:37402540-37402559 | Msa0326700:intron | 35.0% | |
| GAAACGAATCTTAGACCAAA+TGG | - | chr2_4:37402574-37402593 | None:intergenic | 35.0% | |
| ! | TTGGTCTAAGATTCGTTTCT+TGG | + | chr2_4:37402575-37402594 | Msa0326700:intron | 35.0% |
| AATGGATATCAGTAACCTTG+AGG | + | chr2_4:37402636-37402655 | Msa0326700:intron | 35.0% | |
| ATGGATATCAGTAACCTTGA+GGG | + | chr2_4:37402637-37402656 | Msa0326700:intron | 35.0% | |
| !!! | GCCGTTTTTTTTGTAAACCA+AGG | - | chr2_4:37402694-37402713 | None:intergenic | 35.0% |
| AAAAAAAACGGCATCTCAGT+AGG | + | chr2_4:37402702-37402721 | Msa0326700:intron | 35.0% | |
| CAAAAATTTCCACGTGACTT+AGG | - | chr2_4:37402769-37402788 | None:intergenic | 35.0% | |
| ! | CTAAGTCACGTGGAAATTTT+TGG | + | chr2_4:37402767-37402786 | Msa0326700:intron | 35.0% |
| CAACTAGAGCAATACTGTTT+AGG | - | chr2_4:37402797-37402816 | None:intergenic | 35.0% | |
| AAACAGTATTGCTCTAGTTG+AGG | + | chr2_4:37402797-37402816 | Msa0326700:intron | 35.0% | |
| TGCTCTAGTTGAGGATATAA+TGG | + | chr2_4:37402806-37402825 | Msa0326700:intron | 35.0% | |
| GCTCTAGTTGAGGATATAAT+GGG | + | chr2_4:37402807-37402826 | Msa0326700:intron | 35.0% | |
| ! | TTAGTTACAAGGCATCTATG+TGG | + | chr2_4:37402929-37402948 | Msa0326700:intron | 35.0% |
| ! | TAGTTACAAGGCATCTATGT+GGG | + | chr2_4:37402930-37402949 | Msa0326700:intron | 35.0% |
| TGCTTGCAAATCAAGACTAA+TGG | - | chr2_4:37402989-37403008 | None:intergenic | 35.0% | |
| ! | GCAAGCAATGTGATTCTTTT+TGG | + | chr2_4:37403002-37403021 | Msa0326700:intron | 35.0% |
| ! | ACAGCGAAAGCTAATTTTTC+GGG | - | chr2_4:37403182-37403201 | None:intergenic | 35.0% |
| TCACGTTCTTACAACTTATG+AGG | - | chr2_4:37403828-37403847 | None:intergenic | 35.0% | |
| GAAATTGTATATGGAGTCCA+TGG | - | chr2_4:37403902-37403921 | None:intergenic | 35.0% | |
| GTCGTCGAAGAAATTGTATA+TGG | - | chr2_4:37403911-37403930 | None:intergenic | 35.0% | |
| AACACACAAACTGACTATCA+TGG | - | chr2_4:37403935-37403954 | None:intergenic | 35.0% | |
| ATAGTCAGTTTGTGTGTTTG+TGG | + | chr2_4:37403937-37403956 | Msa0326700:intron | 35.0% | |
| TAGTCAGTTTGTGTGTTTGT+GGG | + | chr2_4:37403938-37403957 | Msa0326700:intron | 35.0% | |
| !! | TTGGCTTTATTTGACTGACA+TGG | - | chr2_4:37404078-37404097 | None:intergenic | 35.0% |
| ! | GAGAAGTGAGGTATTTGAAT+TGG | + | chr2_4:37404194-37404213 | Msa0326700:intron | 35.0% |
| GTGGAATAACTGAAGAAGTT+GGG | - | chr2_4:37404242-37404261 | None:intergenic | 35.0% | |
| AGTGGAATAACTGAAGAAGT+TGG | - | chr2_4:37404243-37404262 | None:intergenic | 35.0% | |
| TACATGTGAAAGCTTATGAC+TGG | + | chr2_4:37404313-37404332 | Msa0326700:CDS | 35.0% | |
| ACATGTGAAAGCTTATGACT+GGG | + | chr2_4:37404314-37404333 | Msa0326700:CDS | 35.0% | |
| CATGAGTGTGTATTATCCTT+TGG | + | chr2_4:37404510-37404529 | Msa0326700:intron | 35.0% | |
| TTGCAACAATTTCCATTAGG+TGG | - | chr2_4:37404704-37404723 | None:intergenic | 35.0% | |
| !! | TGTCTAAGTTGATCACAGTA+AGG | - | chr2_4:37404737-37404756 | None:intergenic | 35.0% |
| ! | TTGGTTTATACTGATTGGGT+CGG | + | chr2_4:37404815-37404834 | Msa0326700:intron | 35.0% |
| ! | CATTTTACAATCGTTTCCGA+GGG | + | chr2_4:37404915-37404934 | Msa0326700:intron | 35.0% |
| ! | ATTTTACAATCGTTTCCGAG+GGG | + | chr2_4:37404916-37404935 | Msa0326700:intron | 35.0% |
| ! | TACTAAAGTGTCCGTTTATG+AGG | - | chr2_4:37404996-37405015 | None:intergenic | 35.0% |
| TACCAGGTAGTTCCAAAATA+GGG | - | chr2_4:37405123-37405142 | None:intergenic | 35.0% | |
| ATACCAGGTAGTTCCAAAAT+AGG | - | chr2_4:37405124-37405143 | None:intergenic | 35.0% | |
| TTTCATTGTTGCAGTAAGAC+TGG | + | chr2_4:37405166-37405185 | Msa0326700:intron | 35.0% | |
| !! | TCAGTTTTATATCCAAACCG+TGG | + | chr2_4:37405233-37405252 | Msa0326700:CDS | 35.0% |
| AACAGTGAATATTTCCACCA+CGG | - | chr2_4:37405253-37405272 | None:intergenic | 35.0% | |
| CCTTCATATTCTTTGTAAGG+AGG | - | chr2_4:37405317-37405336 | None:intergenic | 35.0% | |
| CCTCCTTACAAAGAATATGA+AGG | + | chr2_4:37405314-37405333 | Msa0326700:CDS | 35.0% | |
| AGAGGACAGTTAATATGAGA+CGG | - | chr2_4:37405473-37405492 | None:intergenic | 35.0% | |
| !! | TTAGCCTTACTATTCATAGC+CGG | + | chr2_4:37405590-37405609 | Msa0326700:intron | 35.0% |
| GTAAAAAACAGCGAAGAGAT+AGG | + | chr2_4:37405705-37405724 | Msa0326700:intron | 35.0% | |
| ! | AAAGTACCACTCAAACTGAA+GGG | + | chr2_4:37405796-37405815 | Msa0326700:intron | 35.0% |
| TTATCGAAAAACGGTAAGAC+CGG | + | chr2_4:37405825-37405844 | Msa0326700:intron | 35.0% | |
| GTGGTAAGACTAGACAAAAT+AGG | + | chr2_4:37406006-37406025 | Msa0326700:intron | 35.0% | |
| GACGACATTAGATACATAGT+TGG | + | chr2_4:37406038-37406057 | Msa0326700:intron | 35.0% | |
| CGACATTAGATACATAGTTG+GGG | + | chr2_4:37406040-37406059 | Msa0326700:intron | 35.0% | |
| AACTAGACTTACGTAGTGTT+TGG | + | chr2_4:37406091-37406110 | Msa0326700:intron | 35.0% | |
| ACTAGACTTACGTAGTGTTT+GGG | + | chr2_4:37406092-37406111 | Msa0326700:intron | 35.0% | |
| ! | GACTTGTGGATTATGTAGTA+AGG | + | chr2_4:37406128-37406147 | Msa0326700:intron | 35.0% |
| AGTAAGGAGAGTAGATCAAA+TGG | + | chr2_4:37406144-37406163 | Msa0326700:intron | 35.0% | |
| TTCATCTACCTCTAGTGATT+TGG | - | chr2_4:37406177-37406196 | None:intergenic | 35.0% | |
| TTTATCATACTAAGTGGGGT+CGG | - | chr2_4:37406306-37406325 | None:intergenic | 35.0% | |
| ! | GTTAGTTGGTGCCTATAAAT+AGG | + | chr2_4:37406392-37406411 | Msa0326700:intron | 35.0% |
| GGAAATGGATCTATATGTGA+TGG | + | chr2_4:37406578-37406597 | Msa0326700:CDS | 35.0% | |
| ! | ATCTATATGTGATGGTGAAG+AGG | + | chr2_4:37406586-37406605 | Msa0326700:CDS | 35.0% |
| ATGAATAGTGGTGTATATGC+TGG | + | chr2_4:37406653-37406672 | Msa0326700:CDS | 35.0% | |
| !!! | AACAGTTTTTGGTGGTGGAT+CGG | + | chr2_4:37401714-37401733 | Msa0326700:five_prime_UTR | 40.0% |
| AAAGCTTGAGAAGAAGGAGA+GGG | - | chr2_4:37401942-37401961 | None:intergenic | 40.0% | |
| TTGTGCAAAGCTTGAGAAGA+AGG | - | chr2_4:37401948-37401967 | None:intergenic | 40.0% | |
| TATGAAGCACAAACACTCCT+CGG | + | chr2_4:37402266-37402285 | Msa0326700:intron | 40.0% | |
| GCCTCAGTACCAACATAAAA+TGG | + | chr2_4:37402516-37402535 | Msa0326700:intron | 40.0% | |
| !! | GCCATTTTATGTTGGTACTG+AGG | - | chr2_4:37402520-37402539 | None:intergenic | 40.0% |
| !!! | CCACTTGTGCCATTTTATGT+TGG | - | chr2_4:37402528-37402547 | None:intergenic | 40.0% |
| CCAACATAAAATGGCACAAG+TGG | + | chr2_4:37402525-37402544 | Msa0326700:intron | 40.0% | |
| ! | TCTAAGATTCGTTTCTTGGC+CGG | + | chr2_4:37402579-37402598 | Msa0326700:intron | 40.0% |
| TTTGTTGGGAGACCCTTAAA+TGG | + | chr2_4:37402618-37402637 | Msa0326700:intron | 40.0% | |
| TGGATATCAGTAACCTTGAG+GGG | + | chr2_4:37402638-37402657 | Msa0326700:intron | 40.0% | |
| TGACTTAGGAATTGAGGCTA+AGG | - | chr2_4:37402755-37402774 | None:intergenic | 40.0% | |
| CAGACAGTATTTCGGAAAAG+CGG | - | chr2_4:37402874-37402893 | None:intergenic | 40.0% | |
| AGACTTGGCAGACAGTATTT+CGG | - | chr2_4:37402882-37402901 | None:intergenic | 40.0% | |
| ! | TCTATGTGGGTTGAGAAGTT+TGG | + | chr2_4:37402943-37402962 | Msa0326700:intron | 40.0% |
| ! | CTATGTGGGTTGAGAAGTTT+GGG | + | chr2_4:37402944-37402963 | Msa0326700:intron | 40.0% |
| TTCGGGCTACAATTCATCTT+GGG | - | chr2_4:37403165-37403184 | None:intergenic | 40.0% | |
| TTTCGGGCTACAATTCATCT+TGG | - | chr2_4:37403166-37403185 | None:intergenic | 40.0% | |
| TATTTATGGAGACTTCGCTC+CGG | + | chr2_4:37403265-37403284 | Msa0326700:intron | 40.0% | |
| AGTTTGTGTGTTTGTGGGTA+TGG | + | chr2_4:37403943-37403962 | Msa0326700:intron | 40.0% | |
| GATGTTATGATGCAAGCATC+CGG | - | chr2_4:37404132-37404151 | None:intergenic | 40.0% | |
| ACTGTTCGAAATGAGAAGTG+AGG | + | chr2_4:37404182-37404201 | Msa0326700:intron | 40.0% | |
| TAAATACGGTCATTCCAGGA+TGG | - | chr2_4:37404272-37404291 | None:intergenic | 40.0% | |
| TTGCTAAATACGGTCATTCC+AGG | - | chr2_4:37404276-37404295 | None:intergenic | 40.0% | |
| TATGGACAAAAGCCACCTAA+TGG | + | chr2_4:37404689-37404708 | Msa0326700:intron | 40.0% | |
| CCTCGGAAACGATTGTAAAA+TGG | - | chr2_4:37404917-37404936 | None:intergenic | 40.0% | |
| ! | CCATTTTACAATCGTTTCCG+AGG | + | chr2_4:37404914-37404933 | Msa0326700:intron | 40.0% |
| !!! | ATCCCTATTTTGGAACTACC+TGG | + | chr2_4:37405118-37405137 | Msa0326700:intron | 40.0% |
| ACCTGGTATCTGTATTTCCA+TGG | + | chr2_4:37405135-37405154 | Msa0326700:intron | 40.0% | |
| ACCATGGAAATACAGATACC+AGG | - | chr2_4:37405139-37405158 | None:intergenic | 40.0% | |
| ! | GGCAAAGTTAGCAGTTGATA+AGG | + | chr2_4:37405187-37405206 | Msa0326700:CDS | 40.0% |
| ! | GTTTTATATCCAAACCGTGG+TGG | + | chr2_4:37405236-37405255 | Msa0326700:CDS | 40.0% |
| TGAATATTTCCACCACGGTT+TGG | - | chr2_4:37405248-37405267 | None:intergenic | 40.0% | |
| GACAGTTAATATGAGACGGA+GGG | - | chr2_4:37405469-37405488 | None:intergenic | 40.0% | |
| GAGATGTAAACCACCGTATT+CGG | + | chr2_4:37405727-37405746 | Msa0326700:intron | 40.0% | |
| TTTCAACCACCAACCGAATA+CGG | - | chr2_4:37405743-37405762 | None:intergenic | 40.0% | |
| !! | TATTCGGTTGGTGGTTGAAA+TGG | + | chr2_4:37405743-37405762 | Msa0326700:intron | 40.0% |
| !! | GAAAGTACCACTCAAACTGA+AGG | + | chr2_4:37405795-37405814 | Msa0326700:intron | 40.0% |
| ! | GATTTTCCCTTCAGTTTGAG+TGG | - | chr2_4:37405805-37405824 | None:intergenic | 40.0% |
| GATGTTGTACTGGACAATGT+TGG | + | chr2_4:37405849-37405868 | Msa0326700:intron | 40.0% | |
| TTGTACTGGACAATGTTGGA+CGG | + | chr2_4:37405853-37405872 | Msa0326700:intron | 40.0% | |
| AGAATGTTGTGTTGGATGTG+TGG | + | chr2_4:37405917-37405936 | Msa0326700:intron | 40.0% | |
| TTGTGTTGGATGTGTGGTAA+GGG | + | chr2_4:37405923-37405942 | Msa0326700:intron | 40.0% | |
| AGAATGTTGTGTTGGATGTG+TGG | + | chr2_4:37405917-37405936 | Msa0326700:intron | 40.0% | |
| AAGGAGAGTAGATCAAATGG+AGG | + | chr2_4:37406147-37406166 | Msa0326700:intron | 40.0% | |
| AGGAGAGTAGATCAAATGGA+GGG | + | chr2_4:37406148-37406167 | Msa0326700:intron | 40.0% | |
| ! | GTAGGTTAGTTACTAGTTGG+TGG | + | chr2_4:37406360-37406379 | Msa0326700:intron | 40.0% |
| GGTGCCTATAAATAGGCTTA+AGG | + | chr2_4:37406399-37406418 | Msa0326700:intron | 40.0% | |
| GTTATGAAACACGGCATCAA+TGG | - | chr2_4:37406509-37406528 | None:intergenic | 40.0% | |
| GTGAAGAGGATGAATATGCT+TGG | + | chr2_4:37406600-37406619 | Msa0326700:CDS | 40.0% | |
| !! | CAGAGCTAAAGCTTTAAAGC+TGG | - | chr2_4:37406680-37406699 | None:intergenic | 40.0% |
| CAAAGCTTGAGAAGAAGGAG+AGG | - | chr2_4:37401943-37401962 | None:intergenic | 45.0% | |
| !! | TCCTTAGTTAAAAGGCGCCT+TGG | + | chr2_4:37402204-37402223 | Msa0326700:intron | 45.0% |
| !! | ACCAAGGCGCCTTTTAACTA+AGG | - | chr2_4:37402208-37402227 | None:intergenic | 45.0% |
| TAATTCGAGGGCTACTGTTC+CGG | - | chr2_4:37402248-37402267 | None:intergenic | 45.0% | |
| ATTGGCATGAAGCACGGATA+CGG | - | chr2_4:37402403-37402422 | None:intergenic | 45.0% | |
| CGTAACATTGGCATGAAGCA+CGG | - | chr2_4:37402409-37402428 | None:intergenic | 45.0% | |
| !! | ACTGAGGCACCTTTTAGCTA+TGG | - | chr2_4:37402504-37402523 | None:intergenic | 45.0% |
| AAAAACGGCATCTCAGTAGG+TGG | + | chr2_4:37402705-37402724 | Msa0326700:intron | 45.0% | |
| TCTCAGTAGGTGGTTGAGTA+TGG | + | chr2_4:37402715-37402734 | Msa0326700:intron | 45.0% | |
| CTCAGTAGGTGGTTGAGTAT+GGG | + | chr2_4:37402716-37402735 | Msa0326700:intron | 45.0% | |
| CTTAGGAATTGAGGCTAAGG+TGG | - | chr2_4:37402752-37402771 | None:intergenic | 45.0% | |
| TCCACGTGACTTAGGAATTG+AGG | - | chr2_4:37402761-37402780 | None:intergenic | 45.0% | |
| CAAACTTAAGCCACACACGA+AGG | - | chr2_4:37402849-37402868 | None:intergenic | 45.0% | |
| ! | ACCAGTTGATGTTGGGCTAA+AGG | + | chr2_4:37403598-37403617 | Msa0326700:CDS | 45.0% |
| TCCTTTAGCCCAACATCAAC+TGG | - | chr2_4:37403602-37403621 | None:intergenic | 45.0% | |
| ! | AGTTGATGTTGGGCTAAAGG+AGG | + | chr2_4:37403601-37403620 | Msa0326700:CDS | 45.0% |
| ! | GATCGAGGGCTTGGATTTTT+CGG | + | chr2_4:37403638-37403657 | Msa0326700:CDS | 45.0% |
| ATCGAGCTACTCTACTCAGT+TGG | - | chr2_4:37403670-37403689 | None:intergenic | 45.0% | |
| AACTGAGTAGAGTAGCTCGA+TGG | + | chr2_4:37403669-37403688 | Msa0326700:CDS | 45.0% | |
| ACTGAGTAGAGTAGCTCGAT+GGG | + | chr2_4:37403670-37403689 | Msa0326700:CDS | 45.0% | |
| GGCTAAGCCGATAACATATG+TGG | + | chr2_4:37403691-37403710 | Msa0326700:CDS | 45.0% | |
| TGTGTTTGTGGGTATGGCTA+TGG | + | chr2_4:37403949-37403968 | Msa0326700:intron | 45.0% | |
| ACAAGACGCAATGAGCAGTT+TGG | - | chr2_4:37404097-37404116 | None:intergenic | 45.0% | |
| GTTATACCTTGAGCATGTCC+TGG | - | chr2_4:37404372-37404391 | None:intergenic | 45.0% | |
| ! | GCGTGCAGTTGGTGTAAAAA+AGG | + | chr2_4:37404578-37404597 | Msa0326700:intron | 45.0% |
| ! | GTTCTGAGTTCAAATCCCCT+CGG | - | chr2_4:37404934-37404953 | None:intergenic | 45.0% |
| GGACAGTTAATATGAGACGG+AGG | - | chr2_4:37405470-37405489 | None:intergenic | 45.0% | |
| ! | CCTCTTCTTTTACCCGACTT+GGG | - | chr2_4:37405617-37405636 | None:intergenic | 45.0% |
| CCAAGTCGGGTAAAAGAAGA+GGG | + | chr2_4:37405615-37405634 | Msa0326700:intron | 45.0% | |
| AAGAGGGTTGTGGTAGACTT+GGG | + | chr2_4:37405631-37405650 | Msa0326700:intron | 45.0% | |
| TGTAAACCACCGTATTCGGT+TGG | + | chr2_4:37405731-37405750 | Msa0326700:intron | 45.0% | |
| ! | TTGGTGGTTGAAATGGAGGA+GGG | + | chr2_4:37405750-37405769 | Msa0326700:intron | 45.0% |
| ATTGTCCAGTACAACATCGC+CGG | - | chr2_4:37405847-37405866 | None:intergenic | 45.0% | |
| GTTGTGTTGGATGTGTGGTA+AGG | + | chr2_4:37405922-37405941 | Msa0326700:intron | 45.0% | |
| GCATGTAGAGAGAAGACTTG+TGG | + | chr2_4:37406114-37406133 | Msa0326700:intron | 45.0% | |
| GGAGAGTAGATCAAATGGAG+GGG | + | chr2_4:37406149-37406168 | Msa0326700:intron | 45.0% | |
| !! | GGTTAGTTACTAGTTGGTGG+TGG | + | chr2_4:37406363-37406382 | Msa0326700:intron | 45.0% |
| ! | GGTGGTGGTTACTAGTTAGT+TGG | + | chr2_4:37406378-37406397 | Msa0326700:intron | 45.0% |
| GTTTCCTAATCCACCTGCTT+TGG | + | chr2_4:37406542-37406561 | Msa0326700:intron | 45.0% | |
| ! | AGATCCAAAGCAGGTGGATT+AGG | - | chr2_4:37406549-37406568 | None:intergenic | 45.0% |
| !! | TGAATATGCTTGGCTTGCAG+AGG | + | chr2_4:37406610-37406629 | Msa0326700:CDS | 45.0% |
| !! | GAAGGAGAGGGTATTCGAGA+GGG | - | chr2_4:37401930-37401949 | None:intergenic | 50.0% |
| !! | AGAAGGAGAGGGTATTCGAG+AGG | - | chr2_4:37401931-37401950 | None:intergenic | 50.0% |
| GCACAAACACTCCTCGGATT+AGG | + | chr2_4:37402272-37402291 | Msa0326700:intron | 50.0% | |
| ATACGGACACAGACACGACA+CGG | - | chr2_4:37402386-37402405 | None:intergenic | 50.0% | |
| ! | TGGACTTGAGGGCGTAACAT+TGG | - | chr2_4:37402421-37402440 | None:intergenic | 50.0% |
| TGTGCATGTGGAGGATACCT+TGG | + | chr2_4:37402674-37402693 | Msa0326700:intron | 50.0% | |
| GCCTCAATTCCTAAGTCACG+TGG | + | chr2_4:37402757-37402776 | Msa0326700:intron | 50.0% | |
| CAGGGCATGTACAGAAGACT+TGG | - | chr2_4:37402897-37402916 | None:intergenic | 50.0% | |
| GTCTTCTGTACATGCCCTGA+TGG | + | chr2_4:37402898-37402917 | Msa0326700:intron | 50.0% | |
| AAGCTGCAGACGATGATCGA+GGG | + | chr2_4:37403624-37403643 | Msa0326700:CDS | 50.0% | |
| ! | TGCTGCTTGCATCTTAGCAG+AGG | - | chr2_4:37403988-37404007 | None:intergenic | 50.0% |
| TTGCTTTCTACGATGCAGGG+TGG | - | chr2_4:37404345-37404364 | None:intergenic | 50.0% | |
| ACCCTGCATCGTAGAAAGCA+AGG | + | chr2_4:37404344-37404363 | Msa0326700:CDS | 50.0% | |
| CCCTTGCTTTCTACGATGCA+GGG | - | chr2_4:37404348-37404367 | None:intergenic | 50.0% | |
| CCCTGCATCGTAGAAAGCAA+GGG | + | chr2_4:37404345-37404364 | Msa0326700:CDS | 50.0% | |
| TCCCTTGCTTTCTACGATGC+AGG | - | chr2_4:37404349-37404368 | None:intergenic | 50.0% | |
| ATCGTAGAAAGCAAGGGACC+AGG | + | chr2_4:37404351-37404370 | Msa0326700:CDS | 50.0% | |
| AGTAACACCTTGTGCCATGC+TGG | + | chr2_4:37405280-37405299 | Msa0326700:CDS | 50.0% | |
| GGGACCGGCTATGAATAGTA+AGG | - | chr2_4:37405597-37405616 | None:intergenic | 50.0% | |
| ATTCATAGCCGGTCCCAAGT+CGG | + | chr2_4:37405601-37405620 | Msa0326700:intron | 50.0% | |
| !!! | TCTTTTACCCGACTTGGGAC+CGG | - | chr2_4:37405612-37405631 | None:intergenic | 50.0% |
| CCCAAGTCGGGTAAAAGAAG+AGG | + | chr2_4:37405614-37405633 | Msa0326700:intron | 50.0% | |
| ! | CCCTCTTCTTTTACCCGACT+TGG | - | chr2_4:37405618-37405637 | None:intergenic | 50.0% |
| CGGGTAAAAGAAGAGGGTTG+TGG | + | chr2_4:37405621-37405640 | Msa0326700:intron | 50.0% | |
| GAAGAGGGTTGTGGTAGACT+TGG | + | chr2_4:37405630-37405649 | Msa0326700:intron | 50.0% | |
| AAACCACCGTATTCGGTTGG+TGG | + | chr2_4:37405734-37405753 | Msa0326700:intron | 50.0% | |
| !! | TCGGTTGGTGGTTGAAATGG+AGG | + | chr2_4:37405746-37405765 | Msa0326700:intron | 50.0% |
| !! | GTTGGTGGTTGAAATGGAGG+AGG | + | chr2_4:37405749-37405768 | Msa0326700:intron | 50.0% |
| TTGAAATGGAGGAGGGTCTC+AGG | + | chr2_4:37405757-37405776 | Msa0326700:intron | 50.0% | |
| TAAGACCGGCGATGTTGTAC+TGG | + | chr2_4:37405839-37405858 | Msa0326700:intron | 50.0% | |
| ! | TCCTCGGATTAGGTGTGTCC+CGG | + | chr2_4:37402282-37402301 | Msa0326700:intron | 55.0% |
| ! | AAGCAGCGCAGTGGACTTGA+GGG | - | chr2_4:37402432-37402451 | None:intergenic | 55.0% |
| ! | AAAGCAGCGCAGTGGACTTG+AGG | - | chr2_4:37402433-37402452 | None:intergenic | 55.0% |
| !!! | TCCACTGCGCTGCTTTTCTG+AGG | + | chr2_4:37402437-37402456 | Msa0326700:intron | 55.0% |
| ACCTCAGAAAAGCAGCGCAG+TGG | - | chr2_4:37402441-37402460 | None:intergenic | 55.0% | |
| CGTTTCTTGGCCGGTGCATA+TGG | + | chr2_4:37402588-37402607 | Msa0326700:intron | 55.0% | |
| TTTGTCTCCGCGTGTGCATG+TGG | + | chr2_4:37402662-37402681 | Msa0326700:intron | 55.0% | |
| GTATCCTCCACATGCACACG+CGG | - | chr2_4:37402672-37402691 | None:intergenic | 55.0% | |
| CTTAAGCCACACACGAAGGC+TGG | - | chr2_4:37402845-37402864 | None:intergenic | 55.0% | |
| GAAGCTGCAGACGATGATCG+AGG | + | chr2_4:37403623-37403642 | Msa0326700:CDS | 55.0% | |
| ATTCCACTCCACGACCATCC+TGG | + | chr2_4:37404255-37404274 | Msa0326700:CDS | 55.0% | |
| ATTCCAGGATGGTCGTGGAG+TGG | - | chr2_4:37404261-37404280 | None:intergenic | 55.0% | |
| AAGGGACCAGGACATGCTCA+AGG | + | chr2_4:37404363-37404382 | Msa0326700:CDS | 55.0% | |
| CACCAACTGCACGCAACCAA+GGG | - | chr2_4:37404572-37404591 | None:intergenic | 55.0% | |
| ACACCAACTGCACGCAACCA+AGG | - | chr2_4:37404573-37404592 | None:intergenic | 55.0% | |
| AGAACGTCCAGCATGGCACA+AGG | - | chr2_4:37405290-37405309 | None:intergenic | 55.0% | |
| TTCATAGCCGGTCCCAAGTC+GGG | + | chr2_4:37405602-37405621 | Msa0326700:intron | 55.0% | |
| CAACCACCAACCGAATACGG+TGG | - | chr2_4:37405740-37405759 | None:intergenic | 55.0% | |
| GAGGGGAGCCAAATCACTAG+AGG | + | chr2_4:37406166-37406185 | Msa0326700:intron | 55.0% | |
| TGCTGCAGATCCAAAGCAGG+TGG | - | chr2_4:37406555-37406574 | None:intergenic | 55.0% | |
| TGCTGCTGCAGATCCAAAGC+AGG | - | chr2_4:37406558-37406577 | None:intergenic | 55.0% | |
| ! | TGCTTTGGATCTGCAGCAGC+AGG | + | chr2_4:37406557-37406576 | Msa0326700:intron | 55.0% |
| GGATCTGCAGCAGCAGGAAA+TGG | + | chr2_4:37406563-37406582 | Msa0326700:intron | 55.0% | |
| CGCGGAGACAAATCCCCTCA+AGG | - | chr2_4:37402654-37402673 | None:intergenic | 60.0% | |
| GCAGACGATGATCGAGGGCT+TGG | + | chr2_4:37403629-37403648 | Msa0326700:CDS | 60.0% | |
| CGGTCATTCCAGGATGGTCG+TGG | - | chr2_4:37404266-37404285 | None:intergenic | 60.0% | |
| CAACTGCACGCAACCAAGGG+AGG | - | chr2_4:37404569-37404588 | None:intergenic | 60.0% | |
| CTCCCTTGGTTGCGTGCAGT+TGG | + | chr2_4:37404567-37404586 | Msa0326700:intron | 60.0% | |
| AGGTGCGAGAACGTCCAGCA+TGG | - | chr2_4:37405297-37405316 | None:intergenic | 60.0% | |
| GCCGGGACACACCTAATCCG+AGG | - | chr2_4:37402286-37402305 | None:intergenic | 65.0% | |
| !! | ATGTGCCGGTGTCGTGTCGC+CGG | - | chr2_4:37402304-37402323 | None:intergenic | 65.0% |
| GTCTCCGCGTGTGCATGTGG+AGG | + | chr2_4:37402665-37402684 | Msa0326700:intron | 65.0% | |
| GGTCTGCCAGCCTTCGTGTG+TGG | + | chr2_4:37402836-37402855 | Msa0326700:intron | 65.0% | |
| GTGTCCCGGCGACACGACAC+CGG | + | chr2_4:37402296-37402315 | Msa0326700:intron | 70.0% | |
| !! | TGTGCCGGTGTCGTGTCGCC+GGG | - | chr2_4:37402303-37402322 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 37401711 | 37406834 | 37401711 | ID=Msa0326700;Name=Msa0326700 |
| chr2_4 | mRNA | 37401711 | 37406834 | 37401711 | ID=Msa0326700-mRNA-1;Parent=Msa0326700;Name=Msa0326700-mRNA-1;_AED=0.16;_eAED=0.16;_QI=93|1|1|1|1|1|5|140|272 |
| chr2_4 | exon | 37401711 | 37401984 | 37401711 | ID=Msa0326700-mRNA-1:exon:11361;Parent=Msa0326700-mRNA-1 |
| chr2_4 | exon | 37403588 | 37403739 | 37403588 | ID=Msa0326700-mRNA-1:exon:11362;Parent=Msa0326700-mRNA-1 |
| chr2_4 | exon | 37404222 | 37404384 | 37404222 | ID=Msa0326700-mRNA-1:exon:11363;Parent=Msa0326700-mRNA-1 |
| chr2_4 | exon | 37405180 | 37405380 | 37405180 | ID=Msa0326700-mRNA-1:exon:11364;Parent=Msa0326700-mRNA-1 |
| chr2_4 | exon | 37406573 | 37406834 | 37406573 | ID=Msa0326700-mRNA-1:exon:11365;Parent=Msa0326700-mRNA-1 |
| chr2_4 | five_prime_UTR | 37401711 | 37401803 | 37401711 | ID=Msa0326700-mRNA-1:five_prime_utr;Parent=Msa0326700-mRNA-1 |
| chr2_4 | CDS | 37401804 | 37401984 | 37401804 | ID=Msa0326700-mRNA-1:cds;Parent=Msa0326700-mRNA-1 |
| chr2_4 | CDS | 37403588 | 37403739 | 37403588 | ID=Msa0326700-mRNA-1:cds;Parent=Msa0326700-mRNA-1 |
| chr2_4 | CDS | 37404222 | 37404384 | 37404222 | ID=Msa0326700-mRNA-1:cds;Parent=Msa0326700-mRNA-1 |
| chr2_4 | CDS | 37405180 | 37405380 | 37405180 | ID=Msa0326700-mRNA-1:cds;Parent=Msa0326700-mRNA-1 |
| chr2_4 | CDS | 37406573 | 37406694 | 37406573 | ID=Msa0326700-mRNA-1:cds;Parent=Msa0326700-mRNA-1 |
| chr2_4 | three_prime_UTR | 37406695 | 37406834 | 37406695 | ID=Msa0326700-mRNA-1:three_prime_utr;Parent=Msa0326700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
