Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331420 | XP_013464497.2 | 95.276 | 127 | 6 | 0 | 3 | 129 | 235 | 361 | 3.88e-81 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0331420 | Msa0331430 | 0.826814 | 2.206934e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331420 | MtrunA17_Chr2g0314471 | 95.276 | 127 | 6 | 0 | 3 | 129 | 235 | 361 | 3.57e-85 | 255 |
| Msa0331420 | MtrunA17_Chr2g0314451 | 84.252 | 127 | 20 | 0 | 3 | 129 | 234 | 360 | 1.64e-74 | 228 |
| Msa0331420 | MtrunA17_Chr2g0314461 | 84.252 | 127 | 20 | 0 | 3 | 129 | 235 | 361 | 1.20e-73 | 226 |
| Msa0331420 | MtrunA17_Chr8g0368241 | 67.939 | 131 | 41 | 1 | 3 | 132 | 241 | 371 | 7.37e-60 | 190 |
| Msa0331420 | MtrunA17_Chr8g0368161 | 69.291 | 127 | 38 | 1 | 4 | 129 | 276 | 402 | 1.57e-58 | 188 |
| Msa0331420 | MtrunA17_Chr8g0368181 | 66.400 | 125 | 40 | 2 | 3 | 126 | 21 | 144 | 5.58e-54 | 169 |
| Msa0331420 | MtrunA17_Chr8g0368201 | 64.062 | 128 | 44 | 2 | 3 | 129 | 147 | 273 | 2.54e-53 | 171 |
| Msa0331420 | MtrunA17_Chr3g0129891 | 61.364 | 132 | 47 | 3 | 3 | 131 | 211 | 341 | 2.14e-52 | 170 |
| Msa0331420 | MtrunA17_Chr8g0368281 | 60.000 | 125 | 49 | 1 | 3 | 126 | 21 | 145 | 2.60e-51 | 162 |
| Msa0331420 | MtrunA17_Chr5g0413131 | 61.290 | 124 | 48 | 0 | 3 | 126 | 291 | 414 | 2.81e-51 | 169 |
| Msa0331420 | MtrunA17_Chr2g0326371 | 61.832 | 131 | 46 | 4 | 1 | 129 | 186 | 314 | 9.17e-49 | 160 |
| Msa0331420 | MtrunA17_Chr7g0274951 | 55.200 | 125 | 55 | 1 | 3 | 126 | 267 | 391 | 5.14e-48 | 160 |
| Msa0331420 | MtrunA17_Chr1g0189961 | 55.200 | 125 | 55 | 1 | 3 | 126 | 278 | 402 | 7.40e-48 | 160 |
| Msa0331420 | MtrunA17_Chr8g0368291 | 58.678 | 121 | 49 | 1 | 7 | 126 | 235 | 355 | 9.06e-47 | 156 |
| Msa0331420 | MtrunA17_Chr4g0058771 | 55.645 | 124 | 54 | 1 | 4 | 126 | 309 | 432 | 1.47e-45 | 155 |
| Msa0331420 | MtrunA17_Chr8g0368361 | 47.552 | 143 | 75 | 0 | 3 | 145 | 21 | 163 | 1.91e-45 | 147 |
| Msa0331420 | MtrunA17_Chr3g0117271 | 53.226 | 124 | 56 | 2 | 4 | 126 | 325 | 447 | 3.32e-44 | 151 |
| Msa0331420 | MtrunA17_Chr2g0309251 | 51.200 | 125 | 60 | 1 | 3 | 126 | 253 | 377 | 5.71e-44 | 149 |
| Msa0331420 | MtrunA17_Chr8g0380511 | 52.713 | 129 | 59 | 2 | 3 | 129 | 242 | 370 | 6.19e-44 | 149 |
| Msa0331420 | MtrunA17_Chr8g0368341 | 52.941 | 119 | 54 | 2 | 9 | 126 | 168 | 285 | 6.23e-39 | 134 |
| Msa0331420 | MtrunA17_Chr8g0368331 | 50.000 | 126 | 61 | 2 | 3 | 126 | 111 | 236 | 6.77e-39 | 133 |
| Msa0331420 | MtrunA17_Chr6g0453411 | 48.889 | 135 | 65 | 3 | 4 | 136 | 203 | 335 | 1.34e-35 | 126 |
| Msa0331420 | MtrunA17_Chr8g0368381 | 56.667 | 90 | 39 | 0 | 3 | 92 | 21 | 110 | 2.11e-35 | 119 |
| Msa0331420 | MtrunA17_Chr1g0151871 | 45.736 | 129 | 67 | 2 | 3 | 129 | 154 | 281 | 7.35e-34 | 121 |
| Msa0331420 | MtrunA17_Chr8g0368231 | 67.073 | 82 | 26 | 1 | 52 | 132 | 8 | 89 | 1.03e-33 | 115 |
| Msa0331420 | MtrunA17_Chr3g0135371 | 45.578 | 147 | 70 | 4 | 6 | 149 | 263 | 402 | 2.27e-30 | 113 |
| Msa0331420 | MtrunA17_Chr8g0368261 | 61.446 | 83 | 30 | 2 | 48 | 129 | 1 | 82 | 7.93e-30 | 105 |
| Msa0331420 | MtrunA17_Chr3g0135381 | 43.537 | 147 | 72 | 5 | 6 | 149 | 267 | 405 | 1.31e-27 | 106 |
| Msa0331420 | MtrunA17_Chr3g0135401 | 40.940 | 149 | 78 | 4 | 6 | 151 | 179 | 320 | 4.44e-27 | 103 |
| Msa0331420 | MtrunA17_Chr3g0135441 | 41.406 | 128 | 71 | 2 | 4 | 128 | 58 | 184 | 4.53e-27 | 101 |
| Msa0331420 | MtrunA17_Chr8g0339871 | 39.394 | 132 | 74 | 4 | 3 | 130 | 64 | 193 | 1.41e-25 | 97.8 |
| Msa0331420 | MtrunA17_Chr5g0434771 | 41.379 | 145 | 78 | 6 | 1 | 142 | 15 | 155 | 2.16e-22 | 88.2 |
| Msa0331420 | MtrunA17_Chr2g0302651 | 37.879 | 132 | 76 | 4 | 3 | 130 | 23 | 152 | 2.79e-22 | 88.2 |
| Msa0331420 | MtrunA17_Chr3g0138811 | 36.765 | 136 | 79 | 5 | 3 | 136 | 218 | 348 | 3.10e-22 | 91.3 |
| Msa0331420 | MtrunA17_Chr8g0353971 | 36.923 | 130 | 79 | 2 | 1 | 130 | 1 | 127 | 3.33e-20 | 82.0 |
| Msa0331420 | MtrunA17_Chr2g0302691 | 36.641 | 131 | 70 | 4 | 3 | 130 | 204 | 324 | 6.53e-20 | 84.7 |
| Msa0331420 | MtrunA17_Chr8g0391201 | 37.302 | 126 | 74 | 3 | 7 | 129 | 67 | 190 | 6.48e-19 | 80.1 |
| Msa0331420 | MtrunA17_Chr5g0445181 | 39.423 | 104 | 52 | 4 | 9 | 112 | 207 | 299 | 8.44e-17 | 75.5 |
| Msa0331420 | MtrunA17_Chr8g0353941 | 34.677 | 124 | 78 | 2 | 1 | 124 | 11 | 131 | 3.22e-16 | 72.0 |
| Msa0331420 | MtrunA17_Chr8g0368221 | 65.306 | 49 | 17 | 0 | 3 | 51 | 210 | 258 | 4.07e-16 | 73.2 |
| Msa0331420 | MtrunA17_Chr5g0426971 | 37.097 | 124 | 70 | 4 | 4 | 125 | 93 | 210 | 4.14e-16 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331420 | AT1G10750.1 | 61.290 | 124 | 47 | 1 | 4 | 126 | 295 | 418 | 9.93e-50 | 166 |
| Msa0331420 | AT5G18460.1 | 56.250 | 128 | 55 | 1 | 3 | 129 | 257 | 384 | 5.14e-49 | 163 |
| Msa0331420 | AT5G50150.1 | 58.065 | 124 | 51 | 1 | 4 | 126 | 248 | 371 | 1.96e-48 | 161 |
| Msa0331420 | AT1G23340.2 | 57.600 | 125 | 52 | 1 | 3 | 126 | 236 | 360 | 4.27e-48 | 160 |
| Msa0331420 | AT1G23340.1 | 57.600 | 125 | 52 | 1 | 3 | 126 | 236 | 360 | 4.27e-48 | 160 |
| Msa0331420 | AT1G70550.1 | 58.400 | 125 | 51 | 1 | 3 | 126 | 292 | 416 | 6.20e-47 | 158 |
| Msa0331420 | AT2G44220.1 | 56.452 | 124 | 53 | 1 | 4 | 126 | 230 | 353 | 1.06e-45 | 154 |
| Msa0331420 | AT2G44210.1 | 48.980 | 147 | 69 | 2 | 3 | 147 | 241 | 383 | 1.48e-44 | 151 |
| Msa0331420 | AT2G44210.2 | 48.980 | 147 | 69 | 2 | 3 | 147 | 271 | 413 | 2.95e-44 | 151 |
| Msa0331420 | AT2G44240.1 | 52.419 | 124 | 59 | 0 | 3 | 126 | 229 | 352 | 8.91e-44 | 149 |
| Msa0331420 | AT3G13510.1 | 52.000 | 125 | 59 | 1 | 3 | 126 | 246 | 370 | 3.57e-43 | 147 |
| Msa0331420 | AT5G56530.2 | 50.000 | 128 | 63 | 1 | 3 | 129 | 247 | 374 | 5.49e-43 | 147 |
| Msa0331420 | AT5G56530.1 | 50.000 | 128 | 63 | 1 | 3 | 129 | 247 | 374 | 5.49e-43 | 147 |
| Msa0331420 | AT1G55360.1 | 52.000 | 125 | 59 | 1 | 3 | 126 | 249 | 373 | 5.81e-43 | 147 |
| Msa0331420 | AT2G17750.1 | 52.632 | 133 | 60 | 3 | 3 | 134 | 225 | 355 | 4.90e-42 | 144 |
| Msa0331420 | AT3G48230.1 | 54.472 | 123 | 53 | 3 | 6 | 126 | 203 | 324 | 1.04e-39 | 137 |
| Msa0331420 | AT2G44250.2 | 50.000 | 130 | 61 | 3 | 3 | 129 | 151 | 279 | 6.60e-37 | 129 |
| Msa0331420 | AT2G44250.1 | 50.000 | 130 | 61 | 3 | 3 | 129 | 234 | 362 | 1.02e-36 | 130 |
| Msa0331420 | AT5G19170.1 | 48.837 | 129 | 64 | 2 | 3 | 129 | 197 | 325 | 4.51e-36 | 128 |
| Msa0331420 | AT2G19360.1 | 51.613 | 124 | 59 | 1 | 4 | 126 | 254 | 377 | 4.79e-36 | 129 |
| Msa0331420 | AT5G25960.1 | 45.985 | 137 | 70 | 3 | 4 | 138 | 184 | 318 | 2.10e-31 | 115 |
| Msa0331420 | AT4G23355.1 | 47.500 | 120 | 58 | 3 | 9 | 126 | 235 | 351 | 7.28e-31 | 115 |
| Msa0331420 | AT4G23370.1 | 47.059 | 136 | 65 | 4 | 3 | 135 | 228 | 359 | 1.07e-30 | 114 |
| Msa0331420 | AT5G25950.1 | 44.882 | 127 | 66 | 2 | 4 | 127 | 258 | 383 | 3.85e-30 | 113 |
| Msa0331420 | AT2G20170.3 | 44.755 | 143 | 70 | 4 | 3 | 138 | 208 | 348 | 1.41e-29 | 111 |
| Msa0331420 | AT4G23365.1 | 46.667 | 120 | 59 | 3 | 9 | 126 | 235 | 351 | 1.67e-29 | 111 |
| Msa0331420 | AT2G20170.1 | 44.755 | 143 | 70 | 4 | 3 | 138 | 225 | 365 | 2.14e-29 | 110 |
| Msa0331420 | AT2G20170.2 | 44.755 | 143 | 70 | 4 | 3 | 138 | 225 | 365 | 2.14e-29 | 110 |
| Msa0331420 | AT4G23350.1 | 45.378 | 119 | 60 | 3 | 10 | 126 | 238 | 353 | 3.42e-28 | 107 |
| Msa0331420 | AT4G23360.1 | 45.000 | 120 | 61 | 3 | 9 | 126 | 236 | 352 | 3.75e-28 | 107 |
| Msa0331420 | AT4G23390.1 | 45.238 | 126 | 64 | 3 | 3 | 126 | 227 | 349 | 4.82e-27 | 104 |
| Msa0331420 | AT4G23380.1 | 45.238 | 126 | 59 | 3 | 3 | 126 | 234 | 351 | 1.22e-25 | 100 |
| Msa0331420 | AT4G17505.1 | 41.935 | 124 | 62 | 3 | 4 | 125 | 160 | 275 | 1.20e-22 | 91.7 |
| Msa0331420 | AT2G27320.1 | 37.008 | 127 | 76 | 3 | 4 | 129 | 177 | 300 | 8.80e-22 | 89.4 |
| Msa0331420 | AT2G35250.1 | 33.333 | 126 | 81 | 2 | 4 | 129 | 172 | 294 | 7.40e-19 | 81.6 |
| Msa0331420 | AT5G60380.1 | 33.858 | 127 | 78 | 3 | 5 | 130 | 200 | 321 | 1.46e-18 | 81.3 |
| Msa0331420 | AT5G25415.1 | 34.109 | 129 | 76 | 3 | 5 | 129 | 160 | 283 | 4.36e-18 | 79.7 |
| Msa0331420 | AT5G11660.1 | 34.884 | 129 | 76 | 4 | 5 | 129 | 136 | 260 | 5.05e-18 | 79.3 |
| Msa0331420 | AT5G05030.1 | 40.678 | 118 | 60 | 4 | 5 | 116 | 193 | 306 | 1.77e-16 | 75.5 |
| Msa0331420 | AT5G25410.1 | 35.606 | 132 | 68 | 5 | 5 | 129 | 200 | 321 | 3.98e-16 | 74.3 |
| Msa0331420 | AT1G10190.1 | 36.066 | 122 | 70 | 5 | 8 | 126 | 230 | 346 | 4.80e-16 | 74.3 |
| Msa0331420 | AT4G15050.1 | 36.134 | 119 | 68 | 5 | 11 | 126 | 233 | 346 | 4.60e-15 | 71.6 |
| Msa0331420 | AT5G36680.1 | 35.484 | 124 | 66 | 3 | 5 | 123 | 162 | 276 | 5.49e-15 | 70.9 |
| Msa0331420 | AT5G36770.1 | 35.484 | 124 | 66 | 3 | 5 | 123 | 162 | 276 | 5.49e-15 | 70.9 |
| Msa0331420 | AT5G37520.1 | 37.864 | 103 | 56 | 5 | 11 | 111 | 40 | 136 | 3.32e-14 | 67.4 |
| Msa0331420 | AT5G46820.1 | 39.423 | 104 | 58 | 2 | 10 | 109 | 179 | 281 | 6.00e-14 | 68.2 |
| Msa0331420 | AT5G04937.1 | 32.308 | 130 | 69 | 4 | 5 | 129 | 44 | 159 | 1.84e-13 | 65.5 |
| Msa0331420 | AT1G23340.3 | 55.102 | 49 | 22 | 0 | 3 | 51 | 236 | 284 | 5.30e-13 | 65.1 |
| Msa0331420 | AT4G15053.1 | 35.714 | 126 | 69 | 6 | 8 | 127 | 237 | 356 | 4.81e-12 | 62.8 |
| Msa0331420 | AT5G46810.1 | 34.286 | 105 | 64 | 2 | 9 | 109 | 180 | 283 | 9.16e-12 | 62.0 |
| Msa0331420 | AT5G46200.1 | 32.203 | 118 | 75 | 4 | 10 | 125 | 243 | 357 | 2.88e-11 | 60.8 |
Find 37 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATATTATTAATATATTTA+TGG | 0.120229 | 2_4:-47155679 | Msa0331420:three_prime_UTR |
| CTCTTTGTTCACAAGTTTAA+AGG | 0.149216 | 2_4:-47159190 | Msa0331420:CDS |
| AATTACTTTATTAATCTATA+AGG | 0.263480 | 2_4:-47159815 | Msa0331420:intron |
| AGTGCAACTACGGTTGAATT+TGG | 0.267799 | 2_4:-47159165 | Msa0331420:CDS |
| CAAAATGTCCACTACCCATT+TGG | 0.297259 | 2_4:+47159100 | None:intergenic |
| GATAGAGAAGAGCAGAAGTT+TGG | 0.297287 | 2_4:-47155873 | Msa0331420:CDS |
| GGGAATTGGTGGCTTGAATA+TGG | 0.337164 | 2_4:-47159243 | Msa0331420:CDS |
| TCTCCAGCTTCTACGTATAA+TGG | 0.360224 | 2_4:-47159850 | Msa0331420:CDS |
| CATGCTCGCCAACAGAATCT+AGG | 0.367612 | 2_4:-47155806 | Msa0331420:CDS |
| TAAAGTAATTATCATAATAT+AGG | 0.371592 | 2_4:+47155725 | None:intergenic |
| GAAGTGTATATAAAGTCAAC+TGG | 0.386484 | 2_4:-47159138 | Msa0331420:CDS |
| AAAATGTCCACTACCCATTT+GGG | 0.391237 | 2_4:+47159101 | None:intergenic |
| ATAGAGAAGAGCAGAAGTTT+GGG | 0.393213 | 2_4:-47155872 | Msa0331420:CDS |
| CTGGCAACATAGTTGGATAT+TGG | 0.400960 | 2_4:-47159218 | Msa0331420:CDS |
| TTGCAGGCCAATGGATATAA+AGG | 0.405072 | 2_4:-47159946 | Msa0331420:CDS |
| TCCAGTTCCTTTATATCCAT+TGG | 0.414487 | 2_4:+47159939 | None:intergenic |
| GCCAATGGATATAAAGGAAC+TGG | 0.424395 | 2_4:-47159940 | Msa0331420:CDS |
| GACACACTCATCAACCCAAA+TGG | 0.443353 | 2_4:-47159115 | Msa0331420:CDS |
| CTAGATTCTGTTGGCGAGCA+TGG | 0.451962 | 2_4:+47155807 | None:intergenic |
| TATGGATCTGGCAACATAGT+TGG | 0.458201 | 2_4:-47159225 | Msa0331420:CDS |
| TGCTACAATTTACGTTGTCC+AGG | 0.468492 | 2_4:-47159916 | Msa0331420:CDS |
| TTGCTAGTTTGAACAAAGCC+TGG | 0.475024 | 2_4:+47159898 | None:intergenic |
| GCAACTACGGTTGAATTTGG+TGG | 0.515818 | 2_4:-47159162 | Msa0331420:CDS |
| TGTCCATTATACGTAGAAGC+TGG | 0.519794 | 2_4:+47159847 | None:intergenic |
| TGGTGGCTTGAATATGGATC+TGG | 0.522110 | 2_4:-47159237 | Msa0331420:CDS |
| ACACACTCATCAACCCAAAT+GGG | 0.533145 | 2_4:-47159114 | Msa0331420:CDS |
| AGCAAAACATTTGCACTTGG+AGG | 0.534063 | 2_4:-47159880 | Msa0331420:CDS |
| TTTAAAGGATAGTGCAACTA+CGG | 0.543349 | 2_4:-47159175 | Msa0331420:CDS |
| TAGTAGTAATTGCAGGCCAA+TGG | 0.546998 | 2_4:-47159955 | None:intergenic |
| ATGCTCGCCAACAGAATCTA+GGG | 0.558807 | 2_4:-47155805 | Msa0331420:CDS |
| AATTCTACCCTAGATTCTGT+TGG | 0.560060 | 2_4:+47155798 | None:intergenic |
| CTTTAAACTTGTGAACAAAG+AGG | 0.560841 | 2_4:+47159191 | None:intergenic |
| TAGGGTAGAATTTATGACAA+TGG | 0.568730 | 2_4:-47155787 | Msa0331420:exon |
| TCATCAACCCAAATGGGTAG+TGG | 0.582932 | 2_4:-47159108 | Msa0331420:CDS |
| ACTAGCAAAACATTTGCACT+TGG | 0.590378 | 2_4:-47159883 | Msa0331420:CDS |
| AAACTTGTGAACAAAGAGGA+TGG | 0.600976 | 2_4:+47159195 | None:intergenic |
| AAGTGTATATAAAGTCAACT+GGG | 0.670587 | 2_4:-47159137 | Msa0331420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr2_4:47156248-47156267 | Msa0331420:intron | 0.0% |
| !! | AATTACTTTATTAATCTATA+AGG | - | chr2_4:47155743-47155762 | Msa0331420:three_prime_UTR | 10.0% |
| !!! | ATATATATATATATGGTTTT+TGG | - | chr2_4:47156275-47156294 | Msa0331420:intron | 10.0% |
| !!! | TATTGATTTATAATCTTAAT+TGG | - | chr2_4:47158804-47158823 | Msa0331420:intron | 10.0% |
| !!! | TAACTTTTTTTTTTTTGAAA+CGG | + | chr2_4:47159569-47159588 | None:intergenic | 10.0% |
| !! | TAAAGTAATTATCATAATAT+AGG | + | chr2_4:47159836-47159855 | None:intergenic | 10.0% |
| !! | AAAAAAATGTAAAAAACAAG+AGG | + | chr2_4:47155837-47155856 | None:intergenic | 15.0% |
| !!! | TTTTTTTATAGTGTCATTTA+AGG | - | chr2_4:47156224-47156243 | Msa0331420:intron | 15.0% |
| !! | TATAACGTGAATTAATAATT+GGG | + | chr2_4:47157042-47157061 | None:intergenic | 15.0% |
| !! | TTATAACGTGAATTAATAAT+TGG | + | chr2_4:47157043-47157062 | None:intergenic | 15.0% |
| !! | TTTGTTAATAACAACAAAAA+GGG | + | chr2_4:47157463-47157482 | None:intergenic | 15.0% |
| !!! | TATGTCACTTATAAATATAA+TGG | + | chr2_4:47158267-47158286 | None:intergenic | 15.0% |
| !! | CTCTAAATATGAATTTAAAA+TGG | - | chr2_4:47158303-47158322 | Msa0331420:intron | 15.0% |
| !! | ATATTTATTTATAGTGCAAT+AGG | - | chr2_4:47158402-47158421 | Msa0331420:intron | 15.0% |
| !! | AAAATAGTAAATTAAATGCA+GGG | + | chr2_4:47158558-47158577 | None:intergenic | 15.0% |
| !! | TAAAATAGTAAATTAAATGC+AGG | + | chr2_4:47158559-47158578 | None:intergenic | 15.0% |
| !! | TATTTATATGGAAACAATTT+AGG | + | chr2_4:47158953-47158972 | None:intergenic | 15.0% |
| !! | GTATAAACTAACTATTTATA+TGG | + | chr2_4:47158965-47158984 | None:intergenic | 15.0% |
| !!! | AATCGTACAGTAATAATTTT+TGG | - | chr2_4:47155975-47155994 | Msa0331420:intron | 20.0% |
| !! | AAACAAATGAATCGTTAAAT+TGG | - | chr2_4:47156151-47156170 | Msa0331420:intron | 20.0% |
| !!! | TTCAAAAGCTTCATATTTTA+GGG | - | chr2_4:47156494-47156513 | Msa0331420:intron | 20.0% |
| !! | ATTTATTCCATCAATAATGA+TGG | - | chr2_4:47156800-47156819 | Msa0331420:intron | 20.0% |
| !! | TTAATCAATGTTATTACTTG+CGG | + | chr2_4:47156923-47156942 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTTCAAATACTGT+CGG | + | chr2_4:47156969-47156988 | None:intergenic | 20.0% |
| !! | TTGTTAATAACAACAAAAAG+GGG | + | chr2_4:47157462-47157481 | None:intergenic | 20.0% |
| !! | CTTTGTTAATAACAACAAAA+AGG | + | chr2_4:47157464-47157483 | None:intergenic | 20.0% |
| !! | AACAAAAAATAAACATCAAG+TGG | + | chr2_4:47157639-47157658 | None:intergenic | 20.0% |
| !! | ATTAAAATTACAAATTCTGC+AGG | + | chr2_4:47157665-47157684 | None:intergenic | 20.0% |
| !! | TGATATCAAACAAAAAACAT+TGG | + | chr2_4:47158111-47158130 | None:intergenic | 20.0% |
| !! | AAAAAAATTAAGTTATGCTC+TGG | - | chr2_4:47158357-47158376 | Msa0331420:intron | 20.0% |
| !! | AAATAGTAAATTAAATGCAG+GGG | + | chr2_4:47158557-47158576 | None:intergenic | 20.0% |
| !!! | TATTTTATGAACAACAATTG+TGG | - | chr2_4:47158572-47158591 | Msa0331420:intron | 20.0% |
| !!! | TTTTGAATTTCATATCGATA+AGG | - | chr2_4:47158674-47158693 | Msa0331420:intron | 20.0% |
| !!! | ATAGTTAGTTTATACTCTTT+TGG | - | chr2_4:47158970-47158989 | Msa0331420:intron | 20.0% |
| !! | TTAATAATGTTAATGCTAGT+TGG | - | chr2_4:47159015-47159034 | Msa0331420:intron | 20.0% |
| !! | TAATAATGTTAATGCTAGTT+GGG | - | chr2_4:47159016-47159035 | Msa0331420:intron | 20.0% |
| !!! | TTTTGTACGAAAATGATTTA+TGG | - | chr2_4:47159902-47159921 | Msa0331420:CDS | 20.0% |
| ! | ACTTTGGATTATGGATAATT+TGG | - | chr2_4:47155793-47155812 | Msa0331420:exon | 25.0% |
| ! | AAATGTAAAAAACAAGAGGA+GGG | + | chr2_4:47155833-47155852 | None:intergenic | 25.0% |
| ! | AAAATGTAAAAAACAAGAGG+AGG | + | chr2_4:47155834-47155853 | None:intergenic | 25.0% |
| !!! | GTCTATGTTGATGTTTTTTT+TGG | - | chr2_4:47156106-47156125 | Msa0331420:intron | 25.0% |
| ! | AAGTGTATATAAAGTCAACT+GGG | - | chr2_4:47156421-47156440 | Msa0331420:intron | 25.0% |
| !! | CTTCAAAAGCTTCATATTTT+AGG | - | chr2_4:47156493-47156512 | Msa0331420:intron | 25.0% |
| ! | TACACATTGAGATTTGATAA+TGG | + | chr2_4:47156555-47156574 | None:intergenic | 25.0% |
| ! | TTGAATTGGTTAGTAATTTG+AGG | + | chr2_4:47156597-47156616 | None:intergenic | 25.0% |
| !! | TCAGTAATGCAATTTTGAAT+TGG | + | chr2_4:47156611-47156630 | None:intergenic | 25.0% |
| ! | AATTCAAAATTGCATTACTG+AGG | - | chr2_4:47156610-47156629 | Msa0331420:intron | 25.0% |
| ! | ATTCAAAATTGCATTACTGA+GGG | - | chr2_4:47156611-47156630 | Msa0331420:intron | 25.0% |
| ! | GGATTTAGTTGTATTATTGA+GGG | + | chr2_4:47156719-47156738 | None:intergenic | 25.0% |
| ! | TAAATCCGTTAGTATTACAA+GGG | + | chr2_4:47156785-47156804 | None:intergenic | 25.0% |
| ! | ATAAATCCGTTAGTATTACA+AGG | + | chr2_4:47156786-47156805 | None:intergenic | 25.0% |
| ! | AAAATATTTCCGTCAGTAAT+GGG | - | chr2_4:47157003-47157022 | Msa0331420:intron | 25.0% |
| !! | TAGGTTCTAATTATAGCAAA+TGG | - | chr2_4:47157315-47157334 | Msa0331420:intron | 25.0% |
| !! | AGGTTCTAATTATAGCAAAT+GGG | - | chr2_4:47157316-47157335 | Msa0331420:intron | 25.0% |
| ! | AACTATATTGTTATACCTCA+TGG | + | chr2_4:47157517-47157536 | None:intergenic | 25.0% |
| ! | ATATTCAAATGTGTCTATGA+AGG | + | chr2_4:47157858-47157877 | None:intergenic | 25.0% |
| ! | TTCATAGACACATTTGAATA+TGG | - | chr2_4:47157857-47157876 | Msa0331420:intron | 25.0% |
| !! | TTTGCTATATACAAAGTAGA+GGG | + | chr2_4:47157962-47157981 | None:intergenic | 25.0% |
| !!! | TTTTGCTATATACAAAGTAG+AGG | + | chr2_4:47157963-47157982 | None:intergenic | 25.0% |
| ! | AAATGGACAATGACTAAAAA+AGG | + | chr2_4:47158084-47158103 | None:intergenic | 25.0% |
| !!! | CAAAAAACATTGGCTTTAAA+TGG | + | chr2_4:47158101-47158120 | None:intergenic | 25.0% |
| ! | TTATTCACTAAGATAAGAAG+TGG | + | chr2_4:47158230-47158249 | None:intergenic | 25.0% |
| ! | ATATATGCCAAGAAACAAAA+AGG | + | chr2_4:47158386-47158405 | None:intergenic | 25.0% |
| !! | ATTTTACAGATATACTCTTG+AGG | - | chr2_4:47158618-47158637 | Msa0331420:intron | 25.0% |
| !! | TCTACTTCATATAAGTTGAA+GGG | + | chr2_4:47158716-47158735 | None:intergenic | 25.0% |
| !! | TTCTACTTCATATAAGTTGA+AGG | + | chr2_4:47158717-47158736 | None:intergenic | 25.0% |
| ! | ATGATTTAACACCATTTACA+GGG | + | chr2_4:47158775-47158794 | None:intergenic | 25.0% |
| ! | AATGATTTAACACCATTTAC+AGG | + | chr2_4:47158776-47158795 | None:intergenic | 25.0% |
| !!! | TGAATTTTGATGTCATGTAT+TGG | - | chr2_4:47159372-47159391 | Msa0331420:intron | 25.0% |
| !! | GAAGAAGACATTTTTCTTAA+TGG | - | chr2_4:47159721-47159740 | Msa0331420:intron | 25.0% |
| ! | TCAGATTACCAAATTGACTT+TGG | - | chr2_4:47155777-47155796 | Msa0331420:three_prime_UTR | 30.0% |
| ! | ACCAAATTGACTTTGGATTA+TGG | - | chr2_4:47155784-47155803 | Msa0331420:exon | 30.0% |
| TCCATAATCCAAAGTCAATT+TGG | + | chr2_4:47155788-47155807 | None:intergenic | 30.0% | |
| GATAATTCACACATTCTTGA+AGG | + | chr2_4:47155862-47155881 | None:intergenic | 30.0% | |
| AGACTAGAGATAAGTCAATT+TGG | - | chr2_4:47155904-47155923 | Msa0331420:intron | 30.0% | |
| TGGTATCAATAAGATTGATC+TGG | - | chr2_4:47155995-47156014 | Msa0331420:intron | 30.0% | |
| AGATTGATCTGGTATATATG+TGG | - | chr2_4:47156006-47156025 | Msa0331420:intron | 30.0% | |
| !!! | ATATATATGGTTTTTGGTGC+AGG | - | chr2_4:47156281-47156300 | Msa0331420:intron | 30.0% |
| CTTTAAACTTGTGAACAAAG+AGG | + | chr2_4:47156370-47156389 | None:intergenic | 30.0% | |
| CTCTTTGTTCACAAGTTTAA+AGG | - | chr2_4:47156368-47156387 | Msa0331420:intron | 30.0% | |
| TTTAAAGGATAGTGCAACTA+CGG | - | chr2_4:47156383-47156402 | Msa0331420:intron | 30.0% | |
| GAAGTGTATATAAAGTCAAC+TGG | - | chr2_4:47156420-47156439 | Msa0331420:intron | 30.0% | |
| AAGTTGTGAATTCTGATAAC+AGG | - | chr2_4:47156523-47156542 | Msa0331420:intron | 30.0% | |
| AATTTGAGGAATTCTTGTAG+TGG | + | chr2_4:47156583-47156602 | None:intergenic | 30.0% | |
| !!! | TATTACTGAGGGTTTTTTCT+TGG | + | chr2_4:47156680-47156699 | None:intergenic | 30.0% |
| AAAACCCTCAGTAATATTAC+AGG | - | chr2_4:47156684-47156703 | Msa0331420:intron | 30.0% | |
| CGGATTTAGTTGTATTATTG+AGG | + | chr2_4:47156720-47156739 | None:intergenic | 30.0% | |
| AATCTCCCTTGTAATACTAA+CGG | - | chr2_4:47156777-47156796 | Msa0331420:intron | 30.0% | |
| CTATACACCATCATTATTGA+TGG | + | chr2_4:47156810-47156829 | None:intergenic | 30.0% | |
| ! | CATCAATAATGATGGTGTAT+AGG | - | chr2_4:47156808-47156827 | Msa0331420:intron | 30.0% |
| TTGCGGATTTGAATGATTAT+TGG | + | chr2_4:47156906-47156925 | None:intergenic | 30.0% | |
| TTTGAAAAGAAAAAATCCGC+CGG | - | chr2_4:47156975-47156994 | Msa0331420:intron | 30.0% | |
| !! | GACGGAAATATTTTGTTTAC+CGG | + | chr2_4:47156997-47157016 | None:intergenic | 30.0% |
| CAAAATATTTCCGTCAGTAA+TGG | - | chr2_4:47157002-47157021 | Msa0331420:intron | 30.0% | |
| ATTGAACAGAAATGAGATGA+AGG | + | chr2_4:47157141-47157160 | None:intergenic | 30.0% | |
| AGTAAATAGCAGAAGAATGA+GGG | - | chr2_4:47157221-47157240 | Msa0331420:intron | 30.0% | |
| TGAGGTGAGTTTCTTAAATT+AGG | - | chr2_4:47157296-47157315 | Msa0331420:intron | 30.0% | |
| TAATTATAGCAAATGGGAAC+AGG | - | chr2_4:47157322-47157341 | Msa0331420:intron | 30.0% | |
| GGAATTAGCAATTAGGATTA+AGG | - | chr2_4:47157343-47157362 | Msa0331420:intron | 30.0% | |
| !!! | CAGTTTTGATTTTCCCTAAT+TGG | - | chr2_4:47157384-47157403 | Msa0331420:intron | 30.0% |
| ! | GATTTTCCCTAATTGGATTA+AGG | - | chr2_4:47157391-47157410 | Msa0331420:intron | 30.0% |
| ! | TAGCAATTTGAAACCCTAAT+AGG | - | chr2_4:47157431-47157450 | Msa0331420:intron | 30.0% |
| AAAAGGGGAAAATCCTATTA+GGG | + | chr2_4:47157447-47157466 | None:intergenic | 30.0% | |
| AAAAAGGGGAAAATCCTATT+AGG | + | chr2_4:47157448-47157467 | None:intergenic | 30.0% | |
| ! | ATCATTTGTTTAATTTCGCC+TGG | - | chr2_4:47157574-47157593 | Msa0331420:intron | 30.0% |
| ! | TCATTTGTTTAATTTCGCCT+GGG | - | chr2_4:47157575-47157594 | Msa0331420:intron | 30.0% |
| TGAATATGGAAGTAAGCTTA+TGG | - | chr2_4:47157871-47157890 | Msa0331420:intron | 30.0% | |
| TTTATCTGTGAACAAAGTCT+TGG | + | chr2_4:47158337-47158356 | None:intergenic | 30.0% | |
| TGATATATACTTCGTGAAAG+AGG | - | chr2_4:47158879-47158898 | Msa0331420:intron | 30.0% | |
| !!! | TGAAAGAGGCATTTTATTGA+TGG | - | chr2_4:47158893-47158912 | Msa0331420:intron | 30.0% |
| !!! | TGTGGGAAGTATTTTTTTTC+TGG | - | chr2_4:47159194-47159213 | Msa0331420:CDS | 30.0% |
| !! | TTTGTAGTTGTTGTTGTTTC+CGG | - | chr2_4:47159502-47159521 | Msa0331420:intron | 30.0% |
| ! | CAATTGATTTCTGTCCAATA+TGG | + | chr2_4:47159610-47159629 | None:intergenic | 30.0% |
| TCAATTGTTAATACCCCTTA+TGG | - | chr2_4:47159623-47159642 | Msa0331420:intron | 30.0% | |
| ACACCAATTAGTAACCATAA+GGG | + | chr2_4:47159640-47159659 | None:intergenic | 30.0% | |
| ACTAATTGGTGTGATACAAT+TGG | - | chr2_4:47159648-47159667 | Msa0331420:intron | 30.0% | |
| TAGGGTAGAATTTATGACAA+TGG | - | chr2_4:47159771-47159790 | Msa0331420:intron | 30.0% | |
| TCCAGTTCCTTTATATCCAT+TGG | + | chr2_4:47155622-47155641 | None:intergenic | 35.0% | |
| ACTAGCAAAACATTTGCACT+TGG | - | chr2_4:47155675-47155694 | Msa0331420:three_prime_UTR | 35.0% | |
| AGGATCAAAAAACTGGGAAT+TGG | - | chr2_4:47156301-47156320 | Msa0331420:intron | 35.0% | |
| ATCAAAAAACTGGGAATTGG+TGG | - | chr2_4:47156304-47156323 | Msa0331420:intron | 35.0% | |
| AAACTTGTGAACAAAGAGGA+TGG | + | chr2_4:47156366-47156385 | None:intergenic | 35.0% | |
| AAAATGTCCACTACCCATTT+GGG | + | chr2_4:47156460-47156479 | None:intergenic | 35.0% | |
| TTTAGACCCTCAGTAATTAC+TGG | - | chr2_4:47156635-47156654 | Msa0331420:intron | 35.0% | |
| !!! | GGTTTTTTCTTGGTTACTGA+AGG | + | chr2_4:47156670-47156689 | None:intergenic | 35.0% |
| TCTGCCTGTAATATTACTGA+GGG | + | chr2_4:47156691-47156710 | None:intergenic | 35.0% | |
| TTCTGCCTGTAATATTACTG+AGG | + | chr2_4:47156692-47156711 | None:intergenic | 35.0% | |
| AGATTCGTCAATGACTTTAC+TGG | + | chr2_4:47156762-47156781 | None:intergenic | 35.0% | |
| CGGATTTGAATGATTATTGG+CGG | + | chr2_4:47156903-47156922 | None:intergenic | 35.0% | |
| !! | GGAAATATTTTGTTTACCGG+CGG | + | chr2_4:47156994-47157013 | None:intergenic | 35.0% |
| TCAATTGAACCCATTACTGA+CGG | + | chr2_4:47157015-47157034 | None:intergenic | 35.0% | |
| GAGTAAATAGCAGAAGAATG+AGG | - | chr2_4:47157220-47157239 | Msa0331420:intron | 35.0% | |
| ACAGATCCTCAATATTGAAC+AGG | + | chr2_4:47157276-47157295 | None:intergenic | 35.0% | |
| TCAATATTGAGGATCTGTTG+AGG | - | chr2_4:47157278-47157297 | Msa0331420:intron | 35.0% | |
| CCAGTTCCTTAATCCAATTA+GGG | + | chr2_4:47157400-47157419 | None:intergenic | 35.0% | |
| TCCAGTTCCTTAATCCAATT+AGG | + | chr2_4:47157401-47157420 | None:intergenic | 35.0% | |
| GGATTAAGGAACTGGAATTA+TGG | - | chr2_4:47157405-47157424 | Msa0331420:intron | 35.0% | |
| ACACAAATGAAACAAAACCC+AGG | + | chr2_4:47157595-47157614 | None:intergenic | 35.0% | |
| TAATTAGCGTGAATGTCACT+TGG | - | chr2_4:47157681-47157700 | Msa0331420:intron | 35.0% | |
| ! | AAGGCATTTAACTCAACTTG+TGG | + | chr2_4:47157839-47157858 | None:intergenic | 35.0% |
| AAGTAAGCTTATGGCAATGT+TGG | - | chr2_4:47157880-47157899 | Msa0331420:intron | 35.0% | |
| GGGCATGGTTATCATTTATT+TGG | + | chr2_4:47157942-47157961 | None:intergenic | 35.0% | |
| TATATACAAAGTAGAGGGCA+TGG | + | chr2_4:47157957-47157976 | None:intergenic | 35.0% | |
| !!! | TGCTACTTTTTCATTCAGCA+TGG | - | chr2_4:47158044-47158063 | Msa0331420:intron | 35.0% |
| ACAACAACACAGCATTCAAT+TGG | + | chr2_4:47158150-47158169 | None:intergenic | 35.0% | |
| !!! | ATTCATCCGGGTTTTTTTGA+TGG | - | chr2_4:47158444-47158463 | Msa0331420:intron | 35.0% |
| ! | TTGCTTTAGTGTTGAATCCT+AGG | - | chr2_4:47158513-47158532 | Msa0331420:intron | 35.0% |
| TGAGGCAACTTATATGAAGA+AGG | - | chr2_4:47158636-47158655 | Msa0331420:intron | 35.0% | |
| CATATCTATTGCCCTGTAAA+TGG | - | chr2_4:47158761-47158780 | Msa0331420:intron | 35.0% | |
| CACTCATAAAACAAACAAGC+CGG | + | chr2_4:47159104-47159123 | None:intergenic | 35.0% | |
| !!! | GTTTGTTTTATGAGTGGAGT+TGG | - | chr2_4:47159108-47159127 | Msa0331420:CDS | 35.0% |
| AAAAAAATACTTCCCACAGC+CGG | + | chr2_4:47159192-47159211 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTTTGGAGATGTCT+TGG | - | chr2_4:47159313-47159332 | Msa0331420:intron | 35.0% |
| !!! | TTTGGTTTTGGAGATGTCTT+GGG | - | chr2_4:47159314-47159333 | Msa0331420:intron | 35.0% |
| !!! | TCGTCATGCTTTTTCTTTAC+CGG | - | chr2_4:47159451-47159470 | Msa0331420:intron | 35.0% |
| TACCCCTTATGGTTACTAAT+TGG | - | chr2_4:47159634-47159653 | Msa0331420:intron | 35.0% | |
| CACCAATTAGTAACCATAAG+GGG | + | chr2_4:47159639-47159658 | None:intergenic | 35.0% | |
| CACACCAATTAGTAACCATA+AGG | + | chr2_4:47159641-47159660 | None:intergenic | 35.0% | |
| ATAGAGAAGAGCAGAAGTTT+GGG | - | chr2_4:47159686-47159705 | Msa0331420:intron | 35.0% | |
| AATTCTACCCTAGATTCTGT+TGG | + | chr2_4:47159763-47159782 | None:intergenic | 35.0% | |
| TTGCAGGCCAATGGATATAA+AGG | - | chr2_4:47155612-47155631 | Msa0331420:three_prime_UTR | 40.0% | |
| GCCAATGGATATAAAGGAAC+TGG | - | chr2_4:47155618-47155637 | Msa0331420:three_prime_UTR | 40.0% | |
| TGCTACAATTTACGTTGTCC+AGG | - | chr2_4:47155642-47155661 | Msa0331420:three_prime_UTR | 40.0% | |
| ! | TTGCTAGTTTGAACAAAGCC+TGG | + | chr2_4:47155663-47155682 | None:intergenic | 40.0% |
| AGCAAAACATTTGCACTTGG+AGG | - | chr2_4:47155678-47155697 | Msa0331420:three_prime_UTR | 40.0% | |
| TCTCCAGCTTCTACGTATAA+TGG | - | chr2_4:47155708-47155727 | Msa0331420:three_prime_UTR | 40.0% | |
| TGTCCATTATACGTAGAAGC+TGG | + | chr2_4:47155714-47155733 | None:intergenic | 40.0% | |
| TTTCATTAACCAGCGTCAAG+AGG | - | chr2_4:47156073-47156092 | Msa0331420:intron | 40.0% | |
| TTCATTAACCAGCGTCAAGA+GGG | - | chr2_4:47156074-47156093 | Msa0331420:intron | 40.0% | |
| TTGGTGCAGGATCAAAAAAC+TGG | - | chr2_4:47156294-47156313 | Msa0331420:intron | 40.0% | |
| TGGTGCAGGATCAAAAAACT+GGG | - | chr2_4:47156295-47156314 | Msa0331420:intron | 40.0% | |
| TATGGATCTGGCAACATAGT+TGG | - | chr2_4:47156333-47156352 | Msa0331420:intron | 40.0% | |
| CTGGCAACATAGTTGGATAT+TGG | - | chr2_4:47156340-47156359 | Msa0331420:intron | 40.0% | |
| AGTGCAACTACGGTTGAATT+TGG | - | chr2_4:47156393-47156412 | Msa0331420:intron | 40.0% | |
| ACACACTCATCAACCCAAAT+GGG | - | chr2_4:47156444-47156463 | Msa0331420:intron | 40.0% | |
| CAAAATGTCCACTACCCATT+TGG | + | chr2_4:47156461-47156480 | None:intergenic | 40.0% | |
| !! | TAGTGGACATTTTGCAGATG+AGG | - | chr2_4:47156467-47156486 | Msa0331420:intron | 40.0% |
| ! | AGTGGACATTTTGCAGATGA+GGG | - | chr2_4:47156468-47156487 | Msa0331420:intron | 40.0% |
| TTTCCGCCAGTAATTACTGA+GGG | + | chr2_4:47156644-47156663 | None:intergenic | 40.0% | |
| ! | TTTTCCGCCAGTAATTACTG+AGG | + | chr2_4:47156645-47156664 | None:intergenic | 40.0% |
| GCGGATTTATCTGTCAGTAA+CGG | + | chr2_4:47156740-47156759 | None:intergenic | 40.0% | |
| TTCGTCAATGACTTTACTGG+CGG | + | chr2_4:47156759-47156778 | None:intergenic | 40.0% | |
| TATATCCGCCAGTAATACGA+TGG | + | chr2_4:47156847-47156866 | None:intergenic | 40.0% | |
| TCGGAATAATGCATTACTGG+CGG | + | chr2_4:47156950-47156969 | None:intergenic | 40.0% | |
| CTGTCGGAATAATGCATTAC+TGG | + | chr2_4:47156953-47156972 | None:intergenic | 40.0% | |
| ACACATACAAAACACGCATC+TGG | - | chr2_4:47157085-47157104 | Msa0331420:intron | 40.0% | |
| AAAACACGCATCTGGATTCT+GGG | - | chr2_4:47157093-47157112 | Msa0331420:intron | 40.0% | |
| GAGGAACAATTGAGATGCTT+GGG | + | chr2_4:47157166-47157185 | None:intergenic | 40.0% | |
| AGAGGAACAATTGAGATGCT+TGG | + | chr2_4:47157167-47157186 | None:intergenic | 40.0% | |
| ATAGCAGAAGAATGAGGGTT+TGG | - | chr2_4:47157226-47157245 | Msa0331420:intron | 40.0% | |
| GGGAACAGGAATTAGCAATT+AGG | - | chr2_4:47157336-47157355 | Msa0331420:intron | 40.0% | |
| CCCTAATTGGATTAAGGAAC+TGG | - | chr2_4:47157397-47157416 | Msa0331420:intron | 40.0% | |
| AACTACACTTTGTTCTGACG+AGG | - | chr2_4:47157491-47157510 | Msa0331420:intron | 40.0% | |
| TGATCTGCACGATGTTGAAT+CGG | + | chr2_4:47157789-47157808 | None:intergenic | 40.0% | |
| AGCTTATGGCAATGTTGGAT+TGG | - | chr2_4:47157885-47157904 | Msa0331420:intron | 40.0% | |
| ! | TGAATGCTGTGTTGTTGTCT+TGG | - | chr2_4:47158152-47158171 | Msa0331420:intron | 40.0% |
| !! | CTGGTGTCCTTTTTGTTTCT+TGG | - | chr2_4:47158376-47158395 | Msa0331420:intron | 40.0% |
| AAAAACCCGGATGAATTGTC+AGG | + | chr2_4:47158440-47158459 | None:intergenic | 40.0% | |
| ATTCCCCAATCTCATACGAA+GGG | + | chr2_4:47158484-47158503 | None:intergenic | 40.0% | |
| TATTCCCCAATCTCATACGA+AGG | + | chr2_4:47158485-47158504 | None:intergenic | 40.0% | |
| TGACAGCAATACAATCACCT+AGG | + | chr2_4:47158533-47158552 | None:intergenic | 40.0% | |
| !! | AGGAAGTGAAAGTATTGTCG+TGG | - | chr2_4:47159051-47159070 | Msa0331420:intron | 40.0% |
| !! | AAGTGAAAGTATTGTCGTGG+AGG | - | chr2_4:47159054-47159073 | Msa0331420:intron | 40.0% |
| CTTAGGTAGATCCAATACTC+CGG | - | chr2_4:47159082-47159101 | Msa0331420:CDS | 40.0% | |
| AAACAAACAAGCCGGAGTAT+TGG | + | chr2_4:47159096-47159115 | None:intergenic | 40.0% | |
| !!! | CGGCTTGTTTGTTTTATGAG+TGG | - | chr2_4:47159102-47159121 | Msa0331420:CDS | 40.0% |
| TTGACAGTATAGCAGCTGAT+GGG | - | chr2_4:47159233-47159252 | Msa0331420:CDS | 40.0% | |
| !!! | AGTAGCTGCTGTTTTGGTTT+TGG | - | chr2_4:47159302-47159321 | Msa0331420:intron | 40.0% |
| !!! | CGTCATGCTTTTTCTTTACC+GGG | - | chr2_4:47159452-47159471 | Msa0331420:intron | 40.0% |
| !!! | GTCATGCTTTTTCTTTACCG+GGG | - | chr2_4:47159453-47159472 | Msa0331420:intron | 40.0% |
| ACTACAAAGATGCCGCATAT+AGG | + | chr2_4:47159490-47159509 | None:intergenic | 40.0% | |
| TTTGCGTCTTGCAAGAGTTT+CGG | - | chr2_4:47159528-47159547 | Msa0331420:intron | 40.0% | |
| ATACTCTAGTCCAGCCATAT+TGG | - | chr2_4:47159593-47159612 | Msa0331420:intron | 40.0% | |
| TGATTTCTGTCCAATATGGC+TGG | + | chr2_4:47159606-47159625 | None:intergenic | 40.0% | |
| GATAGAGAAGAGCAGAAGTT+TGG | - | chr2_4:47159685-47159704 | Msa0331420:intron | 40.0% | |
| ! | GGGAATTGGTGGCTTGAATA+TGG | - | chr2_4:47156315-47156334 | Msa0331420:intron | 45.0% |
| TGGTGGCTTGAATATGGATC+TGG | - | chr2_4:47156321-47156340 | Msa0331420:intron | 45.0% | |
| GCAACTACGGTTGAATTTGG+TGG | - | chr2_4:47156396-47156415 | Msa0331420:intron | 45.0% | |
| GACACACTCATCAACCCAAA+TGG | - | chr2_4:47156443-47156462 | Msa0331420:intron | 45.0% | |
| TCATCAACCCAAATGGGTAG+TGG | - | chr2_4:47156450-47156469 | Msa0331420:intron | 45.0% | |
| AGACCCTCAGTAATTACTGG+CGG | - | chr2_4:47156638-47156657 | Msa0331420:intron | 45.0% | |
| TGCACATGCCATCGTATTAC+TGG | - | chr2_4:47156836-47156855 | Msa0331420:intron | 45.0% | |
| ACATGCCATCGTATTACTGG+CGG | - | chr2_4:47156839-47156858 | Msa0331420:intron | 45.0% | |
| CAAAACACGCATCTGGATTC+TGG | - | chr2_4:47157092-47157111 | Msa0331420:intron | 45.0% | |
| ACTCCTTCTTCAACACGAGA+GGG | + | chr2_4:47157204-47157223 | None:intergenic | 45.0% | |
| TACTCCTTCTTCAACACGAG+AGG | + | chr2_4:47157205-47157224 | None:intergenic | 45.0% | |
| !! | AAGAATGAGGGTTTGGTGCT+TGG | - | chr2_4:47157233-47157252 | Msa0331420:intron | 45.0% |
| ! | GTGCTTGGTGAAGGAGTAAA+GGG | - | chr2_4:47157248-47157267 | Msa0331420:intron | 45.0% |
| AGGGCTCCTGTTCAATATTG+AGG | - | chr2_4:47157267-47157286 | Msa0331420:intron | 45.0% | |
| GCAATGCGGTAGTGTGTATT+TGG | + | chr2_4:47157758-47157777 | None:intergenic | 45.0% | |
| TGGTTCCTCATGTGCAACTT+CGG | - | chr2_4:47157905-47157924 | Msa0331420:intron | 45.0% | |
| GAAATCCGAAGTTGCACATG+AGG | + | chr2_4:47157913-47157932 | None:intergenic | 45.0% | |
| CGCGTTCCATCAAAAAAACC+CGG | + | chr2_4:47158453-47158472 | None:intergenic | 45.0% | |
| !!! | CGGGTTTTTTTGATGGAACG+CGG | - | chr2_4:47158451-47158470 | Msa0331420:intron | 45.0% |
| AGACCCCTTCGTATGAGATT+GGG | - | chr2_4:47158477-47158496 | Msa0331420:intron | 45.0% | |
| TTCCCCAATCTCATACGAAG+GGG | + | chr2_4:47158483-47158502 | None:intergenic | 45.0% | |
| TGCTAGTTGGGAAGAGTTAG+TGG | - | chr2_4:47159028-47159047 | Msa0331420:intron | 45.0% | |
| TAGTTGGGAAGAGTTAGTGG+AGG | - | chr2_4:47159031-47159050 | Msa0331420:intron | 45.0% | |
| !! | TGAAAGTATTGTCGTGGAGG+TGG | - | chr2_4:47159057-47159076 | Msa0331420:CDS | 45.0% |
| CATCAGCTGCTATACTGTCA+AGG | + | chr2_4:47159234-47159253 | None:intergenic | 45.0% | |
| CTTGACAGTATAGCAGCTGA+TGG | - | chr2_4:47159232-47159251 | Msa0331420:CDS | 45.0% | |
| ! | GCAGCTGTATGCTAGTGTTT+TGG | - | chr2_4:47159275-47159294 | Msa0331420:intron | 45.0% |
| !!! | GTTTTGGAGATGTCTTGGGA+TGG | - | chr2_4:47159318-47159337 | Msa0331420:intron | 45.0% |
| GAGATGTCTTGGGATGGTTA+CGG | - | chr2_4:47159324-47159343 | Msa0331420:intron | 45.0% | |
| AGATGTCTTGGGATGGTTAC+GGG | - | chr2_4:47159325-47159344 | Msa0331420:intron | 45.0% | |
| !! | GATGGTTACGGGTTGGTTAA+GGG | - | chr2_4:47159336-47159355 | Msa0331420:intron | 45.0% |
| ! | GGTTGGTTAAGGGATAGCTA+GGG | - | chr2_4:47159346-47159365 | Msa0331420:intron | 45.0% |
| GTTGGTTAAGGGATAGCTAG+GGG | - | chr2_4:47159347-47159366 | Msa0331420:intron | 45.0% | |
| !!! | ATGCTTTTTCTTTACCGGGG+TGG | - | chr2_4:47159456-47159475 | Msa0331420:intron | 45.0% |
| GTGGATGTTACGCCTATATG+CGG | - | chr2_4:47159475-47159494 | Msa0331420:intron | 45.0% | |
| ATGCTCGCCAACAGAATCTA+GGG | - | chr2_4:47159753-47159772 | Msa0331420:intron | 45.0% | |
| !! | TATAAATAAGAAAAATATTA+AGG | + | chr2_4:47158833-47158852 | None:intergenic | 5.0% |
| !! | GAATATTATTAATATATTTA+TGG | - | chr2_4:47159879-47159898 | Msa0331420:CDS | 5.0% |
| CATTAATGCCCTCTTGACGC+TGG | + | chr2_4:47156085-47156104 | None:intergenic | 50.0% | |
| TCTCCCTCTCGTGTTGAAGA+AGG | - | chr2_4:47157198-47157217 | Msa0331420:intron | 50.0% | |
| ! | GGTGCTTGGTGAAGGAGTAA+AGG | - | chr2_4:47157247-47157266 | Msa0331420:intron | 50.0% |
| TTTGTTCTGACGAGGCCATG+AGG | - | chr2_4:47157499-47157518 | Msa0331420:intron | 50.0% | |
| TTGTCAATAGCAGCCGCTAC+CGG | - | chr2_4:47157711-47157730 | Msa0331420:intron | 50.0% | |
| ACACTACCGCATTGCTATCG+CGG | - | chr2_4:47157763-47157782 | Msa0331420:intron | 50.0% | |
| ACCACGCCTGACAATTCATC+CGG | - | chr2_4:47158431-47158450 | Msa0331420:intron | 50.0% | |
| GAGACCCCTTCGTATGAGAT+TGG | - | chr2_4:47158476-47158495 | Msa0331420:intron | 50.0% | |
| GACCCCTTCGTATGAGATTG+GGG | - | chr2_4:47158478-47158497 | Msa0331420:intron | 50.0% | |
| TTGTCGTGGAGGTGGTTCTT+AGG | - | chr2_4:47159065-47159084 | Msa0331420:CDS | 50.0% | |
| GAATGCCTCTTGCGGTAATG+TGG | - | chr2_4:47159140-47159159 | Msa0331420:CDS | 50.0% | |
| !! | GGTCACAGTAGCTGCTGTTT+TGG | - | chr2_4:47159296-47159315 | Msa0331420:intron | 50.0% |
| !! | GGATGGTTACGGGTTGGTTA+AGG | - | chr2_4:47159335-47159354 | Msa0331420:intron | 50.0% |
| !! | GGGTTGGTTAAGGGATAGCT+AGG | - | chr2_4:47159345-47159364 | Msa0331420:intron | 50.0% |
| ! | TCAGACCCATAGCTTTTGCC+TGG | - | chr2_4:47159398-47159417 | Msa0331420:intron | 50.0% |
| AGCAGCCAGGCAAAAGCTAT+GGG | + | chr2_4:47159406-47159425 | None:intergenic | 50.0% | |
| AAGCAGCCAGGCAAAAGCTA+TGG | + | chr2_4:47159407-47159426 | None:intergenic | 50.0% | |
| ! | ATAGCTTTTGCCTGGCTGCT+TGG | - | chr2_4:47159406-47159425 | Msa0331420:intron | 50.0% |
| ! | TTTTGCCTGGCTGCTTGGTT+TGG | - | chr2_4:47159411-47159430 | Msa0331420:intron | 50.0% |
| TATAGGCGTAACATCCACCC+CGG | + | chr2_4:47159473-47159492 | None:intergenic | 50.0% | |
| TCTTGCAAGACGCAAAGAGC+CGG | + | chr2_4:47159524-47159543 | None:intergenic | 50.0% | |
| CTAGATTCTGTTGGCGAGCA+TGG | + | chr2_4:47159754-47159773 | None:intergenic | 50.0% | |
| CATGCTCGCCAACAGAATCT+AGG | - | chr2_4:47159752-47159771 | Msa0331420:intron | 50.0% | |
| AGGGAGAGAGTGAGAGAGAG+AGG | + | chr2_4:47157185-47157204 | None:intergenic | 55.0% | |
| !! | GAGGGTTTGGTGCTTGGTGA+AGG | - | chr2_4:47157239-47157258 | Msa0331420:intron | 55.0% |
| AATCGGCCGCGATAGCAATG+CGG | + | chr2_4:47157772-47157791 | None:intergenic | 55.0% | |
| CCACGCCTGACAATTCATCC+GGG | - | chr2_4:47158432-47158451 | Msa0331420:intron | 55.0% | |
| !! | ATGAGTGGAGTTGGTGTCCC+TGG | - | chr2_4:47159117-47159136 | Msa0331420:CDS | 55.0% |
| !! | TGAGTGGAGTTGGTGTCCCT+GGG | - | chr2_4:47159118-47159137 | Msa0331420:CDS | 55.0% |
| !! | TACCGCAAGAGGCATTCCCA+GGG | + | chr2_4:47159137-47159156 | None:intergenic | 55.0% |
| !! | TTACCGCAAGAGGCATTCCC+AGG | + | chr2_4:47159138-47159157 | None:intergenic | 55.0% |
| AGCAGCCACATTACCGCAAG+AGG | + | chr2_4:47159148-47159167 | None:intergenic | 55.0% | |
| GGTAATGTGGCTGCTGTCGT+GGG | - | chr2_4:47159153-47159172 | Msa0331420:CDS | 55.0% | |
| !! | CGTGGGTTTCTGGTGTGTTC+CGG | - | chr2_4:47159170-47159189 | Msa0331420:CDS | 55.0% |
| ! | TTTCTGGTGTGTTCCGGCTG+TGG | - | chr2_4:47159176-47159195 | Msa0331420:CDS | 55.0% |
| TTCTGGTGTGTTCCGGCTGT+GGG | - | chr2_4:47159177-47159196 | Msa0331420:CDS | 55.0% | |
| GTCTTGGGATGGTTACGGGT+TGG | - | chr2_4:47159329-47159348 | Msa0331420:intron | 55.0% | |
| AACGACCAAACCAAGCAGCC+AGG | + | chr2_4:47159419-47159438 | None:intergenic | 55.0% | |
| !! | TGGCTGCTTGGTTTGGTCGT+TGG | - | chr2_4:47159418-47159437 | Msa0331420:intron | 55.0% |
| !! | GGCTGCTTGGTTTGGTCGTT+GGG | - | chr2_4:47159419-47159438 | Msa0331420:intron | 55.0% |
| CCCGGATGAATTGTCAGGCG+TGG | + | chr2_4:47158435-47158454 | None:intergenic | 60.0% | |
| GTCCCTGGGAATGCCTCTTG+CGG | - | chr2_4:47159132-47159151 | Msa0331420:CDS | 60.0% | |
| CGGTAATGTGGCTGCTGTCG+TGG | - | chr2_4:47159152-47159171 | Msa0331420:CDS | 60.0% | |
| TGGCTGCTGTCGTGGGTTTC+TGG | - | chr2_4:47159160-47159179 | Msa0331420:CDS | 60.0% | |
| AGCCGCTACCGGCGCTATCG+CGG | - | chr2_4:47157722-47157741 | Msa0331420:intron | 70.0% | |
| !! | CACCGCGATAGCGCCGGTAG+CGG | + | chr2_4:47157727-47157746 | None:intergenic | 70.0% |
| CTACCGGCGCTATCGCGGTG+CGG | - | chr2_4:47157727-47157746 | Msa0331420:intron | 70.0% | |
| GCTCCGCACCGCGATAGCGC+CGG | + | chr2_4:47157733-47157752 | None:intergenic | 75.0% | |
| GGCGCTATCGCGGTGCGGAG+CGG | - | chr2_4:47157732-47157751 | Msa0331420:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 47155612 | 47159968 | 47155612 | ID=Msa0331420;Name=Msa0331420 |
| chr2_4 | mRNA | 47155612 | 47159968 | 47155612 | ID=Msa0331420-mRNA-1;Parent=Msa0331420;Name=Msa0331420-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0.33|1|0.5|0.66|3|190|155 |
| chr2_4 | exon | 47155612 | 47155894 | 47155612 | ID=Msa0331420-mRNA-1:exon:14241;Parent=Msa0331420-mRNA-1 |
| chr2_4 | exon | 47159056 | 47159277 | 47159056 | ID=Msa0331420-mRNA-1:exon:14240;Parent=Msa0331420-mRNA-1 |
| chr2_4 | exon | 47159816 | 47159968 | 47159816 | ID=Msa0331420-mRNA-1:exon:14239;Parent=Msa0331420-mRNA-1 |
| chr2_4 | CDS | 47159816 | 47159968 | 47159816 | ID=Msa0331420-mRNA-1:cds;Parent=Msa0331420-mRNA-1 |
| chr2_4 | CDS | 47159056 | 47159277 | 47159056 | ID=Msa0331420-mRNA-1:cds;Parent=Msa0331420-mRNA-1 |
| chr2_4 | CDS | 47155802 | 47155894 | 47155802 | ID=Msa0331420-mRNA-1:cds;Parent=Msa0331420-mRNA-1 |
| chr2_4 | three_prime_UTR | 47155612 | 47155801 | 47155612 | ID=Msa0331420-mRNA-1:three_prime_utr;Parent=Msa0331420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
