Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331940 | XP_003597254.2 | 94.803 | 712 | 8 | 1 | 1 | 712 | 169 | 851 | 0.0 | 1377 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331940 | sp|Q5F471|PP6R3_CHICK | 26.506 | 332 | 173 | 12 | 15 | 317 | 181 | 470 | 3.78e-23 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0331940 | Msa0598880 | -0.801171 | 1.021259e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331940 | MtrunA17_Chr2g0326741 | 94.663 | 712 | 8 | 2 | 1 | 712 | 169 | 850 | 0.0 | 1371 |
| Msa0331940 | MtrunA17_Chr2g0292321 | 56.410 | 468 | 170 | 4 | 1 | 465 | 169 | 605 | 3.45e-180 | 533 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331940 | AT1G07990.1 | 58.683 | 714 | 213 | 13 | 1 | 712 | 169 | 802 | 0.0 | 759 |
| Msa0331940 | AT2G28360.1 | 56.084 | 715 | 216 | 13 | 1 | 712 | 169 | 788 | 0.0 | 732 |
| Msa0331940 | AT3G45190.2 | 52.381 | 714 | 245 | 10 | 1 | 712 | 131 | 751 | 0.0 | 692 |
| Msa0331940 | AT3G45190.1 | 52.381 | 714 | 245 | 10 | 1 | 712 | 169 | 789 | 0.0 | 692 |
| Msa0331940 | AT1G07990.2 | 64.733 | 431 | 114 | 4 | 1 | 431 | 169 | 561 | 0.0 | 559 |
| Msa0331940 | AT1G30470.3 | 57.569 | 469 | 163 | 5 | 1 | 465 | 126 | 562 | 7.89e-167 | 498 |
| Msa0331940 | AT1G30470.1 | 57.569 | 469 | 163 | 5 | 1 | 465 | 169 | 605 | 2.31e-166 | 499 |
| Msa0331940 | AT1G30470.2 | 57.602 | 467 | 164 | 5 | 1 | 465 | 165 | 599 | 2.80e-166 | 498 |
Find 209 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTTAGATATAAAATTTA+TGG | 0.148472 | 2_4:+48104728 | Msa0331940:CDS |
| TTGCATCACATCCATAAAAT+TGG | 0.173077 | 2_4:-48101191 | None:intergenic |
| GATAAAACAGATTCTGCTTT+TGG | 0.203309 | 2_4:-48106759 | None:intergenic |
| TGTTAACAATTCGTGTAATA+TGG | 0.225551 | 2_4:-48103415 | None:intergenic |
| CCAATTGTCTCTGGATTTAC+AGG | 0.227312 | 2_4:-48102025 | None:intergenic |
| CTGCAAGATTGTGATTTAAT+TGG | 0.231092 | 2_4:+48103065 | Msa0331940:CDS |
| CTAATAAGCCCTCGTGTATT+TGG | 0.241316 | 2_4:+48107376 | Msa0331940:three_prime_UTR |
| CCTGGTCATCACCGAGTCTT+AGG | 0.243722 | 2_4:-48105189 | None:intergenic |
| AATCCCACTTACTGAGTTTA+GGG | 0.258444 | 2_4:-48102057 | None:intergenic |
| TTCAGTGTGTATTTCTTTGT+TGG | 0.259106 | 2_4:+48101928 | Msa0331940:CDS |
| GGCTTCGGAATGAATGAAAA+AGG | 0.272701 | 2_4:-48101979 | None:intergenic |
| GGACCTGATTCTTGGTTTGC+AGG | 0.278606 | 2_4:+48107151 | Msa0331940:three_prime_UTR |
| GCTTGGGAAGCATAGATTAA+AGG | 0.288099 | 2_4:+48102316 | Msa0331940:CDS |
| ACCGGTTATTTCAAATGTTA+TGG | 0.288487 | 2_4:+48102160 | Msa0331940:CDS |
| AAATCCCACTTACTGAGTTT+AGG | 0.289394 | 2_4:-48102058 | None:intergenic |
| TTTGCCTGATTGGGTGGGAT+GGG | 0.293982 | 2_4:+48106620 | Msa0331940:CDS |
| AAAGGCCTGACTCAAATTAT+TGG | 0.294251 | 2_4:-48104711 | None:intergenic |
| ACACCGATGGACCTGATTCT+TGG | 0.302908 | 2_4:+48107143 | Msa0331940:three_prime_UTR |
| GGATTACCAGGTAGCAATTC+CGG | 0.303472 | 2_4:+48106489 | Msa0331940:CDS |
| AAATTAAATCACTCACTTAC+AGG | 0.307666 | 2_4:-48107286 | None:intergenic |
| TGCAAGTGCTGCCAATGATA+TGG | 0.313346 | 2_4:+48106545 | Msa0331940:CDS |
| GTGATAGGCCTTTGCCTGAT+TGG | 0.320494 | 2_4:+48106610 | Msa0331940:CDS |
| TGACCAAGAGGTTGCTGCTC+TGG | 0.330490 | 2_4:+48107058 | Msa0331940:CDS |
| TAGTAAGCGTGAAAAGAAAT+AGG | 0.337937 | 2_4:-48107224 | None:intergenic |
| CTTTGCCTGATTGGGTGGGA+TGG | 0.338500 | 2_4:+48106619 | Msa0331940:CDS |
| GAGGAAGATGTTGAATTTGT+AGG | 0.338717 | 2_4:+48106864 | Msa0331940:CDS |
| AATTCAACGATGCGAATTAC+TGG | 0.340079 | 2_4:+48107030 | Msa0331940:CDS |
| CCTTTAGATATAAAATTTAT+GGG | 0.342314 | 2_4:+48104729 | Msa0331940:CDS |
| CTTTCAACTAAGCCTCAAAT+AGG | 0.348326 | 2_4:+48106717 | Msa0331940:CDS |
| AAGTATTGTATTATCATGTT+TGG | 0.361474 | 2_4:+48103010 | Msa0331940:CDS |
| ATGGCAAGCTACCGTGCTTC+AGG | 0.362493 | 2_4:+48104060 | Msa0331940:CDS |
| CCTTCAGATATGCAAGTTAC+TGG | 0.370355 | 2_4:+48106648 | Msa0331940:CDS |
| CTCCGCTCCAGCGAACATTT+AGG | 0.371705 | 2_4:-48107404 | None:intergenic |
| GAACAGATTGTTTATCTGCT+TGG | 0.373694 | 2_4:-48103097 | None:intergenic |
| AAAGTATTGCCTACAACATA+TGG | 0.374032 | 2_4:+48102278 | Msa0331940:CDS |
| GTTCAAAGCGCCTCCATTCC+CGG | 0.375694 | 2_4:-48106508 | None:intergenic |
| ACCATAACATTTGAAATAAC+CGG | 0.376757 | 2_4:-48102161 | None:intergenic |
| ATTGTCCACATCACATCATC+AGG | 0.378644 | 2_4:+48102201 | Msa0331940:CDS |
| TCAGACAAGGAAGAGAGTTT+TGG | 0.389244 | 2_4:+48106588 | Msa0331940:CDS |
| CGTTGAATTCCTTCATCCCT+GGG | 0.389372 | 2_4:-48107016 | None:intergenic |
| TCGTTGAATTCCTTCATCCC+TGG | 0.390370 | 2_4:-48107017 | None:intergenic |
| CCACGTACTGACATGCCTTC+AGG | 0.400772 | 2_4:+48103466 | Msa0331940:CDS |
| TTGCCTGATTGGGTGGGATG+GGG | 0.401767 | 2_4:+48106621 | Msa0331940:CDS |
| TGTACCTGCTGCTGGAAAAC+AGG | 0.401919 | 2_4:+48103370 | Msa0331940:CDS |
| ATCAGGGCTTTCCTTTCTGC+AGG | 0.402943 | 2_4:+48102218 | Msa0331940:CDS |
| TGATAGGCCTTTGCCTGATT+GGG | 0.407584 | 2_4:+48106611 | Msa0331940:CDS |
| GGTTGGAGAGGATGAAGAAT+TGG | 0.412364 | 2_4:+48106410 | Msa0331940:CDS |
| AATCATGCTTTATTGCTGTA+TGG | 0.412894 | 2_4:+48107103 | Msa0331940:three_prime_UTR |
| GGCATGTCAGTACGTGGCTT+CGG | 0.416311 | 2_4:-48103460 | None:intergenic |
| TCACCCCATCCCACCCAATC+AGG | 0.423936 | 2_4:-48106624 | None:intergenic |
| GTCTGTTTACGAACTCCAAC+TGG | 0.428061 | 2_4:+48106265 | Msa0331940:CDS |
| TTTAGCCAATAATTTGAGTC+AGG | 0.431267 | 2_4:+48104706 | Msa0331940:CDS |
| CATCACCCATTCTGTCGTCT+TGG | 0.441134 | 2_4:-48106296 | None:intergenic |
| GATTACCAGGTAGCAATTCC+GGG | 0.444117 | 2_4:+48106490 | Msa0331940:CDS |
| TCTCTCTTCCGACAGAAATC+TGG | 0.444223 | 2_4:+48103118 | Msa0331940:CDS |
| TAACATTCTCAACCACATTA+CGG | 0.444643 | 2_4:-48104084 | None:intergenic |
| TCAATCAAATCTTTACTAGT+TGG | 0.445700 | 2_4:-48106792 | None:intergenic |
| TGGTGTAGTGAATTATTATA+TGG | 0.446206 | 2_4:-48102978 | None:intergenic |
| CGGAAATGAAGCTGCAGAAA+AGG | 0.447243 | 2_4:+48102757 | Msa0331940:CDS |
| AGCATTGCACCAATTGTCTC+TGG | 0.447625 | 2_4:-48102034 | None:intergenic |
| TTTCGATTTAGGTGCAAAAC+CGG | 0.449415 | 2_4:+48102142 | Msa0331940:intron |
| GCCCCTGCAAACCAAGAATC+AGG | 0.450923 | 2_4:-48107154 | None:intergenic |
| GTCCCCTAAAGCGGCAGAAA+AGG | 0.451264 | 2_4:+48106974 | Msa0331940:CDS |
| CAGCCAACTGTACCTGCTGC+TGG | 0.452910 | 2_4:+48103362 | Msa0331940:intron |
| GAGGGAATAGTCGGGGAAGC+AGG | 0.455511 | 2_4:+48106933 | Msa0331940:CDS |
| TGCATCACATCCATAAAATT+GGG | 0.457380 | 2_4:-48101190 | None:intergenic |
| AGCTGTACCATCACTATTTG+AGG | 0.459985 | 2_4:+48106845 | Msa0331940:CDS |
| ACATAAAGTTTCAGCTGCAT+TGG | 0.460813 | 2_4:-48101704 | None:intergenic |
| GAATTAGGGCTACCTATTTG+AGG | 0.461468 | 2_4:-48106729 | None:intergenic |
| CCTAAGACTCGGTGATGACC+AGG | 0.462555 | 2_4:+48105189 | Msa0331940:CDS |
| TACTGAGAAAGCTATGGAAC+AGG | 0.463183 | 2_4:+48106902 | Msa0331940:CDS |
| TGCTGGAAAACAGGCACCAC+GGG | 0.465587 | 2_4:+48103379 | Msa0331940:CDS |
| AACTTGAACGGTGCTGCTAA+TGG | 0.465600 | 2_4:+48106360 | Msa0331940:CDS |
| GGCTGGTCCTAAATGTTCGC+TGG | 0.466557 | 2_4:+48107397 | Msa0331940:three_prime_UTR |
| TCTGAAGAAACCCATATCAT+TGG | 0.467122 | 2_4:-48106556 | None:intergenic |
| CTATTTGAGGCTTAGTTGAA+AGG | 0.470356 | 2_4:-48106716 | None:intergenic |
| CTAGTAAAGATTTGATTGAC+GGG | 0.474989 | 2_4:+48106796 | Msa0331940:CDS |
| CTCAATTCTCCATATGTTGT+AGG | 0.477801 | 2_4:-48102287 | None:intergenic |
| CACAACATCATCTGAGATGA+TGG | 0.477905 | 2_4:+48106329 | Msa0331940:CDS |
| TTTATTGCTGTATGGAAAGT+TGG | 0.477978 | 2_4:+48107111 | Msa0331940:three_prime_UTR |
| CCAGGTAGCAATTCCGGGAA+TGG | 0.478811 | 2_4:+48106495 | Msa0331940:CDS |
| CCTGTAAATCCAGAGACAAT+TGG | 0.480404 | 2_4:+48102025 | Msa0331940:CDS |
| TATGGGTTTCTTCAGATTTG+AGG | 0.480427 | 2_4:+48106563 | Msa0331940:CDS |
| TGTTAACAAAATTATTCACT+TGG | 0.480743 | 2_4:+48103430 | Msa0331940:CDS |
| GACCTGATTCTTGGTTTGCA+GGG | 0.485828 | 2_4:+48107152 | Msa0331940:three_prime_UTR |
| TGAAGCTGCAGAAAAGGAAA+TGG | 0.489127 | 2_4:+48102763 | Msa0331940:CDS |
| TCCTATCTTGTAAAGCAGTC+GGG | 0.492489 | 2_4:-48104631 | None:intergenic |
| GCCCGACTGCTTTACAAGAT+AGG | 0.492622 | 2_4:+48104630 | Msa0331940:CDS |
| ATCCTATCTTGTAAAGCAGT+CGG | 0.495835 | 2_4:-48104632 | None:intergenic |
| CCATTCCCGGAATTGCTACC+TGG | 0.497322 | 2_4:-48106495 | None:intergenic |
| AAGATCAATAACTCGTTGAA+TGG | 0.499006 | 2_4:-48102798 | None:intergenic |
| ATATAAAATTTATGGGAATG+AGG | 0.499725 | 2_4:+48104736 | Msa0331940:CDS |
| CTCTGGAGTGATGAGCATAA+TGG | 0.499965 | 2_4:+48107075 | Msa0331940:exon |
| AACTTCTTCAGTGGATTACC+AGG | 0.501539 | 2_4:+48106477 | Msa0331940:CDS |
| AATACTGAAGACGGCAACCC+AGG | 0.502432 | 2_4:+48106999 | Msa0331940:CDS |
| CTCTGAAAGAGGGAATAGTC+GGG | 0.506411 | 2_4:+48106925 | Msa0331940:CDS |
| TTTGTAGGCGTAGAGTTAGA+AGG | 0.506864 | 2_4:+48106879 | Msa0331940:CDS |
| GCACCACGGGCGGGAAACAT+TGG | 0.509528 | 2_4:+48103392 | Msa0331940:CDS |
| ACTAGTAAAGATTTGATTGA+CGG | 0.509913 | 2_4:+48106795 | Msa0331940:CDS |
| ACTCCAGAGCAGCAACCTCT+TGG | 0.510379 | 2_4:-48107061 | None:intergenic |
| TGCATTCCAAGACGACAGAA+TGG | 0.511665 | 2_4:+48106290 | Msa0331940:CDS |
| AGAAACAGACTCACCTCCCC+TGG | 0.514825 | 2_4:-48105207 | None:intergenic |
| GTACCTCATCATCTCGATCA+TGG | 0.515190 | 2_4:-48104948 | None:intergenic |
| GCTCTGAAAGAGGGAATAGT+CGG | 0.517610 | 2_4:+48106924 | Msa0331940:CDS |
| GAGAATTGAGACCTCCGCTT+GGG | 0.518527 | 2_4:+48102300 | Msa0331940:CDS |
| GCTCATACATGTGTTGGCTT+CGG | 0.518793 | 2_4:-48101994 | None:intergenic |
| CAACAGTGACGATGAGGTAG+TGG | 0.520715 | 2_4:+48106389 | Msa0331940:CDS |
| CTAAATGTTCGCTGGAGCGG+AGG | 0.521306 | 2_4:+48107405 | Msa0331940:three_prime_UTR |
| GCATTCCAAGACGACAGAAT+GGG | 0.525757 | 2_4:+48106291 | Msa0331940:CDS |
| AGACGGCAACCCAGGGATGA+AGG | 0.529686 | 2_4:+48107007 | Msa0331940:CDS |
| TTTCCAGCAGCAGGTACAGT+TGG | 0.530007 | 2_4:-48103365 | None:intergenic |
| CTGGTCATCACCGAGTCTTA+GGG | 0.530018 | 2_4:-48105188 | None:intergenic |
| CTGCTTTACAAGATAGGATG+AGG | 0.530195 | 2_4:+48104636 | Msa0331940:CDS |
| GCAAGTGCTGCCAATGATAT+GGG | 0.530880 | 2_4:+48106546 | Msa0331940:CDS |
| AAAGATTTGATTGACGGGGT+TGG | 0.531373 | 2_4:+48106801 | Msa0331940:CDS |
| AGCTGCATTGGCATTAACTT+CGG | 0.531428 | 2_4:-48101692 | None:intergenic |
| GACTCATCATGATCCACAAA+GGG | 0.535504 | 2_4:-48106684 | None:intergenic |
| TAGGCCTTTGCCTGATTGGG+TGG | 0.535818 | 2_4:+48106614 | Msa0331940:CDS |
| TGCAAGCATGAATCCCTTTG+TGG | 0.535935 | 2_4:+48106671 | Msa0331940:CDS |
| AAAATAGTGAGTGGAGTGAA+TGG | 0.536200 | 2_4:+48104041 | Msa0331940:CDS |
| GCATTGGCATTAACTTCGGC+AGG | 0.536522 | 2_4:-48101688 | None:intergenic |
| ATACAATACTTTCTACATGA+TGG | 0.537091 | 2_4:-48102998 | None:intergenic |
| TTTAATTGCTAGAGTAGATG+AGG | 0.537785 | 2_4:-48101743 | None:intergenic |
| ATGTTAACCGTTGGGCGTGT+GGG | 0.540885 | 2_4:+48104101 | Msa0331940:CDS |
| GTCCTAAATGTTCGCTGGAG+CGG | 0.541718 | 2_4:+48107402 | Msa0331940:three_prime_UTR |
| GACAGAATGGGTGATGCAAA+CGG | 0.542331 | 2_4:+48106303 | Msa0331940:CDS |
| TAAGCCCTCGTGTATTTGGC+TGG | 0.545737 | 2_4:+48107380 | Msa0331940:three_prime_UTR |
| GGAAAACAGGCACCACGGGC+GGG | 0.546553 | 2_4:+48103383 | Msa0331940:CDS |
| TTTGTGGATCATGATGAGTC+TGG | 0.548518 | 2_4:+48106687 | Msa0331940:CDS |
| ACTGAAATTCCGCATAACAT+TGG | 0.550209 | 2_4:+48107473 | Msa0331940:three_prime_UTR |
| TATGGAACAGGCTCTGAAAG+AGG | 0.551064 | 2_4:+48106914 | Msa0331940:CDS |
| TGGAAAACAGGCACCACGGG+CGG | 0.553029 | 2_4:+48103382 | Msa0331940:CDS |
| AGATTGTGATTTAATTGGAA+GGG | 0.557726 | 2_4:+48103070 | Msa0331940:CDS |
| ATGATGACGACATTCATGAC+AGG | 0.558327 | 2_4:+48104666 | Msa0331940:CDS |
| TATGGATGTGATGCAATGGT+TGG | 0.558833 | 2_4:+48101198 | Msa0331940:CDS |
| CAGATTTGAGGCATCAGACA+AGG | 0.559030 | 2_4:+48106575 | Msa0331940:CDS |
| GGTTGAGAATGTTAACCGTT+GGG | 0.559190 | 2_4:+48104093 | Msa0331940:CDS |
| AGAAGGTACTGAGAAAGCTA+TGG | 0.560463 | 2_4:+48106896 | Msa0331940:CDS |
| TATCAACAATCATCTCAAGC+AGG | 0.565593 | 2_4:-48101231 | None:intergenic |
| AATGTTAACCGTTGGGCGTG+TGG | 0.566434 | 2_4:+48104100 | Msa0331940:CDS |
| GAAAAGGAAAATACTGAAGA+CGG | 0.566673 | 2_4:+48106990 | Msa0331940:CDS |
| AAGATTGTGATTTAATTGGA+AGG | 0.568905 | 2_4:+48103069 | Msa0331940:CDS |
| TGGCCAATGTTTCCCGCCCG+TGG | 0.568977 | 2_4:-48103395 | None:intergenic |
| TCTGGATTTACAGGAATATG+TGG | 0.570047 | 2_4:-48102016 | None:intergenic |
| GTCTTGGAATGCAAACCAGT+TGG | 0.574044 | 2_4:-48106280 | None:intergenic |
| GGAGAATTGAGACCTCCGCT+TGG | 0.574108 | 2_4:+48102299 | Msa0331940:CDS |
| AGGCCTTTGCCTGATTGGGT+GGG | 0.575500 | 2_4:+48106615 | Msa0331940:CDS |
| TAAATGTTCGCTGGAGCGGA+GGG | 0.577480 | 2_4:+48107406 | Msa0331940:three_prime_UTR |
| TGGGAATGAGGATAATGAAG+AGG | 0.583867 | 2_4:+48104748 | Msa0331940:CDS |
| ACCTGATTCTTGGTTTGCAG+GGG | 0.589621 | 2_4:+48107153 | Msa0331940:three_prime_UTR |
| CACATTACGGTCCTGAAGCA+CGG | 0.590677 | 2_4:-48104071 | None:intergenic |
| TGTAGGCAATACTTTCTCAT+CGG | 0.592905 | 2_4:-48102270 | None:intergenic |
| ATGGAACAGGCTCTGAAAGA+GGG | 0.594568 | 2_4:+48106915 | Msa0331940:CDS |
| AGTGACGATGAGGTAGTGGT+TGG | 0.598469 | 2_4:+48106393 | Msa0331940:CDS |
| TTAGCAACTCACCTGCAGAA+AGG | 0.598919 | 2_4:-48102229 | None:intergenic |
| ATACTGAAGACGGCAACCCA+GGG | 0.598992 | 2_4:+48107000 | Msa0331940:CDS |
| GGTAGCAATTCCGGGAATGG+AGG | 0.599278 | 2_4:+48106498 | Msa0331940:CDS |
| CTGCTGGAAAACAGGCACCA+CGG | 0.599672 | 2_4:+48103378 | Msa0331940:CDS |
| AAGAAACGTGTCCCCTAAAG+CGG | 0.599693 | 2_4:+48106965 | Msa0331940:CDS |
| GAAAAGGAAATGGTCAACTC+AGG | 0.600458 | 2_4:+48102773 | Msa0331940:CDS |
| CAGAGCGAATTCGATAAATG+TGG | 0.602485 | 2_4:-48107321 | None:intergenic |
| GAGCTTACCCACACGCCCAA+CGG | 0.603966 | 2_4:-48104108 | None:intergenic |
| CCAGTAACTTGCATATCTGA+AGG | 0.606669 | 2_4:-48106648 | None:intergenic |
| TCCATGTACCAGATTTCTGT+CGG | 0.606949 | 2_4:-48103126 | None:intergenic |
| TCTAGCACAAACTTCTTCAG+TGG | 0.607094 | 2_4:+48106468 | Msa0331940:CDS |
| CGATGAGGTAGTGGTTGGAG+AGG | 0.610100 | 2_4:+48106398 | Msa0331940:CDS |
| CATCCCACCCAATCAGGCAA+AGG | 0.611348 | 2_4:-48106618 | None:intergenic |
| CGTGCTTCAGGACCGTAATG+TGG | 0.613132 | 2_4:+48104072 | Msa0331940:CDS |
| AATCTATGCTTCCCAAGCGG+AGG | 0.614776 | 2_4:-48102311 | None:intergenic |
| TTGTCCACATCACATCATCA+GGG | 0.616264 | 2_4:+48102202 | Msa0331940:CDS |
| AGAGCGAATTCGATAAATGT+GGG | 0.619279 | 2_4:-48107320 | None:intergenic |
| TTGGACATCAACAACACCGA+TGG | 0.620484 | 2_4:+48107130 | Msa0331940:three_prime_UTR |
| ACATCTTCCTCAAATAGTGA+TGG | 0.621746 | 2_4:-48106852 | None:intergenic |
| TTACTGGAGGGTTGACCAAG+AGG | 0.625304 | 2_4:+48107046 | Msa0331940:CDS |
| GTCATATCGTCCCTAAGACT+CGG | 0.627979 | 2_4:+48105178 | Msa0331940:CDS |
| TCAACGATGCGAATTACTGG+AGG | 0.629037 | 2_4:+48107033 | Msa0331940:CDS |
| GTATCTTTACCAATGTTATG+CGG | 0.629037 | 2_4:-48107482 | None:intergenic |
| AAACCAAGAATCAGGTCCAT+CGG | 0.629750 | 2_4:-48107146 | None:intergenic |
| TATGTGGCTCATACATGTGT+TGG | 0.633097 | 2_4:-48102000 | None:intergenic |
| TGCTTTACAAGATAGGATGA+GGG | 0.635330 | 2_4:+48104637 | Msa0331940:CDS |
| CAATTAAACTCTCAAGCCCG+AGG | 0.636822 | 2_4:+48101758 | Msa0331940:CDS |
| CAACCATGATCGAGATGATG+AGG | 0.637857 | 2_4:+48104945 | Msa0331940:CDS |
| CTAAGACTCGGTGATGACCA+GGG | 0.641900 | 2_4:+48105190 | Msa0331940:CDS |
| ACATGCAGGAAAATAGTGAG+TGG | 0.642610 | 2_4:+48104032 | Msa0331940:intron |
| TTGTCTTTGTTGCAGGAACG+TGG | 0.646171 | 2_4:+48104922 | Msa0331940:intron |
| TGGTTGAGAATGTTAACCGT+TGG | 0.646731 | 2_4:+48104092 | Msa0331940:CDS |
| GACTCGGTGATGACCAGGGG+AGG | 0.648705 | 2_4:+48105194 | Msa0331940:CDS |
| CAACGATGCGAATTACTGGA+GGG | 0.651888 | 2_4:+48107034 | Msa0331940:CDS |
| AAACGTACAAGTCACAGAGA+AGG | 0.656033 | 2_4:-48107439 | None:intergenic |
| ACACTGAAAGTGAGTTCACA+AGG | 0.657279 | 2_4:-48101913 | None:intergenic |
| CCTGAAGGCATGTCAGTACG+TGG | 0.659268 | 2_4:-48103466 | None:intergenic |
| TAAGACTCGGTGATGACCAG+GGG | 0.660396 | 2_4:+48105191 | Msa0331940:CDS |
| AGACTCATCATGATCCACAA+AGG | 0.661642 | 2_4:-48106685 | None:intergenic |
| TTGAACGGTGCTGCTAATGG+TGG | 0.675103 | 2_4:+48106363 | Msa0331940:CDS |
| AAAGCCCTGATGATGTGATG+TGG | 0.675352 | 2_4:-48102206 | None:intergenic |
| CCATAAAATTGGGATACACG+TGG | 0.678987 | 2_4:-48101180 | None:intergenic |
| TCTGAAAGAGGGAATAGTCG+GGG | 0.679218 | 2_4:+48106926 | Msa0331940:CDS |
| TGGTAACAACAGTGACGATG+AGG | 0.679471 | 2_4:+48106383 | Msa0331940:CDS |
| TGATGACGACATTCATGACA+GGG | 0.680526 | 2_4:+48104667 | Msa0331940:CDS |
| TTTAATCTATGCTTCCCAAG+CGG | 0.696313 | 2_4:-48102314 | None:intergenic |
| AAAACTTAGAATAATAAACA+AGG | 0.700771 | 2_4:-48107255 | None:intergenic |
| TAGTAAAGATTTGATTGACG+GGG | 0.702421 | 2_4:+48106797 | Msa0331940:CDS |
| TTGCAGAAGATGATCAACAA+CGG | 0.704666 | 2_4:-48103048 | None:intergenic |
| TGGAGTGATGAGCATAATGG+TGG | 0.715231 | 2_4:+48107078 | Msa0331940:exon |
| AGGACCAGCCAAATACACGA+GGG | 0.716475 | 2_4:-48107384 | None:intergenic |
| TAGGACCAGCCAAATACACG+AGG | 0.719913 | 2_4:-48107385 | None:intergenic |
| AGAATGGGTGATGCAAACGG+AGG | 0.736988 | 2_4:+48106306 | Msa0331940:CDS |
| ATGGATGAGATAAACTTGAA+CGG | 0.744743 | 2_4:+48106348 | Msa0331940:CDS |
| AGGGCTTATTAGCATCAACG+TGG | 0.777338 | 2_4:-48107365 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTAAATTCATTAAAATATT+AGG | - | chr2_4:48103221-48103240 | None:intergenic | 10.0% |
| !!! | ATATTTTAATGAATTTAGAA+TGG | + | chr2_4:48103222-48103241 | Msa0331940:intron | 10.0% |
| !!! | GATATAATTTTTTAATATGA+TGG | - | chr2_4:48105841-48105860 | None:intergenic | 10.0% |
| !! | CATATTAAAAAATTATATCA+TGG | + | chr2_4:48105842-48105861 | Msa0331940:intron | 10.0% |
| !! | TTTCATTAATAACTTCTTTA+TGG | - | chr2_4:48101553-48101572 | None:intergenic | 15.0% |
| !! | ATAATATGCTTAAAAATACA+AGG | - | chr2_4:48101633-48101652 | None:intergenic | 15.0% |
| !!! | ATATCCTTATTGTTTTTTTT+TGG | + | chr2_4:48102429-48102448 | Msa0331940:intron | 15.0% |
| !! | TTATTTCATATATTGAATTG+TGG | + | chr2_4:48103836-48103855 | Msa0331940:intron | 15.0% |
| !!! | TTTTCTTATATATTTCAATG+TGG | + | chr2_4:48104001-48104020 | Msa0331940:intron | 15.0% |
| !! | CCTTTAGATATAAAATTTAT+GGG | + | chr2_4:48104729-48104748 | Msa0331940:CDS | 15.0% |
| !! | TGAAAATAATAATATTACTC+TGG | - | chr2_4:48105288-48105307 | None:intergenic | 15.0% |
| !! | TTATTTCACTTATTTATCAA+AGG | - | chr2_4:48105335-48105354 | None:intergenic | 15.0% |
| !!! | CAGATACATAATTATTATTT+TGG | - | chr2_4:48106049-48106068 | None:intergenic | 15.0% |
| !! | AAAACTTAGAATAATAAACA+AGG | - | chr2_4:48107258-48107277 | None:intergenic | 15.0% |
| !! | TTCAGATTAATGATTACTAA+CGG | + | chr2_4:48101487-48101506 | Msa0331940:intron | 20.0% |
| !! | CAATGAATTTGTAAACAATA+AGG | - | chr2_4:48102528-48102547 | None:intergenic | 20.0% |
| !!! | ATTTATATCTTTTGTGAGTA+TGG | + | chr2_4:48102887-48102906 | Msa0331940:intron | 20.0% |
| !!! | AAGTATTGTATTATCATGTT+TGG | + | chr2_4:48103010-48103029 | Msa0331940:CDS | 20.0% |
| !! | TGTTAACAAAATTATTCACT+TGG | + | chr2_4:48103430-48103449 | Msa0331940:CDS | 20.0% |
| !!! | TCACAATTATTTTGTACTAT+TGG | + | chr2_4:48103514-48103533 | Msa0331940:intron | 20.0% |
| !!! | AATTTGCTTATATACTTGTT+TGG | + | chr2_4:48103606-48103625 | Msa0331940:intron | 20.0% |
| !! | AAGATGTAATACCTATAATA+TGG | + | chr2_4:48104465-48104484 | Msa0331940:intron | 20.0% |
| !!! | TTTTTCATTTTAGTAACTCA+AGG | + | chr2_4:48104497-48104516 | Msa0331940:intron | 20.0% |
| !!! | TTTTCATTTTAGTAACTCAA+GGG | + | chr2_4:48104498-48104517 | Msa0331940:intron | 20.0% |
| !! | GCCTTTAGATATAAAATTTA+TGG | + | chr2_4:48104728-48104747 | Msa0331940:CDS | 20.0% |
| !!! | CCCATAAATTTTATATCTAA+AGG | - | chr2_4:48104732-48104751 | None:intergenic | 20.0% |
| !! | ATATAAAATTTATGGGAATG+AGG | + | chr2_4:48104736-48104755 | Msa0331940:CDS | 20.0% |
| !!! | TACTAATTTTGGTTTATTCT+CGG | + | chr2_4:48104968-48104987 | Msa0331940:intron | 20.0% |
| !! | AATAAGTGAAATAATATCAG+TGG | + | chr2_4:48105341-48105360 | Msa0331940:intron | 20.0% |
| !!! | TATATTAATCACTGATTAGA+GGG | + | chr2_4:48105503-48105522 | Msa0331940:intron | 20.0% |
| !! | TAAAAAATTATATCATGGGT+TGG | + | chr2_4:48105847-48105866 | Msa0331940:intron | 20.0% |
| !!! | ACTTCAATTTAGTTTTCAAT+TGG | + | chr2_4:48105924-48105943 | Msa0331940:intron | 20.0% |
| !!! | TTTATGTGAATATTTTGATG+TGG | + | chr2_4:48106189-48106208 | Msa0331940:intron | 20.0% |
| !!! | AAGTGAGTGATTTAATTTTA+TGG | + | chr2_4:48107291-48107310 | Msa0331940:three_prime_UTR | 20.0% |
| !!! | AGTGAGTGATTTAATTTTAT+GGG | + | chr2_4:48107292-48107311 | Msa0331940:three_prime_UTR | 20.0% |
| !!! | TCATTAAACATGTTTTGATG+GGG | - | chr2_4:48101407-48101426 | None:intergenic | 25.0% |
| !!! | CTCATTAAACATGTTTTGAT+GGG | - | chr2_4:48101408-48101427 | None:intergenic | 25.0% |
| ! | TGTATGTGTTTGAATTACAT+AGG | + | chr2_4:48101597-48101616 | Msa0331940:intron | 25.0% |
| !! | AGTTCCGTCTTAAAAATTTT+GGG | + | chr2_4:48101857-48101876 | Msa0331940:intron | 25.0% |
| !!! | ATAGCCCAAAATTTTTAAGA+CGG | - | chr2_4:48101864-48101883 | None:intergenic | 25.0% |
| !! | ACCATAACATTTGAAATAAC+CGG | - | chr2_4:48102164-48102183 | None:intergenic | 25.0% |
| !! | ATAAAAGATGTTTGAAACCA+CGG | - | chr2_4:48102405-48102424 | None:intergenic | 25.0% |
| !! | TGGTTTCAAACATCTTTTAT+TGG | + | chr2_4:48102405-48102424 | Msa0331940:intron | 25.0% |
| !!! | TCCTTATTGTTTTTTTTTGG+TGG | + | chr2_4:48102432-48102451 | Msa0331940:intron | 25.0% |
| ! | ACCACCAAAAAAAAACAATA+AGG | - | chr2_4:48102436-48102455 | None:intergenic | 25.0% |
| !!! | TTATTGTTTTTTTTTGGTGG+TGG | + | chr2_4:48102435-48102454 | Msa0331940:intron | 25.0% |
| ! | ATACCAAAAAAACACTTGAT+GGG | - | chr2_4:48102503-48102522 | None:intergenic | 25.0% |
| ! | TATACCAAAAAAACACTTGA+TGG | - | chr2_4:48102504-48102523 | None:intergenic | 25.0% |
| ! | AATGTACAGCTTAGAAATAT+GGG | - | chr2_4:48102688-48102707 | None:intergenic | 25.0% |
| ! | AAATGTACAGCTTAGAAATA+TGG | - | chr2_4:48102689-48102708 | None:intergenic | 25.0% |
| ! | TGGTGTAGTGAATTATTATA+TGG | - | chr2_4:48102981-48103000 | None:intergenic | 25.0% |
| ! | ATACAATACTTTCTACATGA+TGG | - | chr2_4:48103001-48103020 | None:intergenic | 25.0% |
| ! | AAGATTGTGATTTAATTGGA+AGG | + | chr2_4:48103069-48103088 | Msa0331940:CDS | 25.0% |
| ! | AGATTGTGATTTAATTGGAA+GGG | + | chr2_4:48103070-48103089 | Msa0331940:CDS | 25.0% |
| ! | TGTTAACAATTCGTGTAATA+TGG | - | chr2_4:48103418-48103437 | None:intergenic | 25.0% |
| ! | TTAACAATATCTAAGCAGAA+TGG | - | chr2_4:48103587-48103606 | None:intergenic | 25.0% |
| ! | TGTCAATTAAAGAACAACTA+AGG | - | chr2_4:48103719-48103738 | None:intergenic | 25.0% |
| ! | AAGAGATAAAAAAACAGCAT+GGG | - | chr2_4:48103812-48103831 | None:intergenic | 25.0% |
| ! | TAAGAGATAAAAAAACAGCA+TGG | - | chr2_4:48103813-48103832 | None:intergenic | 25.0% |
| !!! | GTTTTTAATTACATGTTTGC+TGG | - | chr2_4:48103863-48103882 | None:intergenic | 25.0% |
| !!! | AACTTCCATGTTTAATTTGT+CGG | + | chr2_4:48103970-48103989 | Msa0331940:intron | 25.0% |
| ! | GAGTTACTAAAATGAAAAAG+TGG | - | chr2_4:48104496-48104515 | None:intergenic | 25.0% |
| ! | TCACAAAACTAAAACGTAAA+AGG | - | chr2_4:48104545-48104564 | None:intergenic | 25.0% |
| ! | AACAAAGACAATCAAAACAT+TGG | - | chr2_4:48104913-48104932 | None:intergenic | 25.0% |
| !!! | GAAGCTGTTTTAAATTCATT+TGG | + | chr2_4:48104990-48105009 | Msa0331940:intron | 25.0% |
| !! | TTTCAAGTAAAGTTGTAAAC+TGG | + | chr2_4:48105303-48105322 | Msa0331940:intron | 25.0% |
| !! | GTATATTAATCACTGATTAG+AGG | + | chr2_4:48105502-48105521 | Msa0331940:intron | 25.0% |
| ! | ATAGCTGTCAGAAAATTAAT+TGG | + | chr2_4:48105687-48105706 | Msa0331940:intron | 25.0% |
| ! | TGGTTAAAAATGTTCACATT+TGG | + | chr2_4:48105707-48105726 | Msa0331940:intron | 25.0% |
| !! | TTTTACATGCTATCTACATA+TGG | + | chr2_4:48106069-48106088 | Msa0331940:intron | 25.0% |
| ! | TCAATCAAATCTTTACTAGT+TGG | - | chr2_4:48106795-48106814 | None:intergenic | 25.0% |
| ! | ACTAGTAAAGATTTGATTGA+CGG | + | chr2_4:48106795-48106814 | Msa0331940:CDS | 25.0% |
| ! | AAATTAAATCACTCACTTAC+AGG | - | chr2_4:48107289-48107308 | None:intergenic | 25.0% |
| !!! | GTGAGTGATTTAATTTTATG+GGG | + | chr2_4:48107293-48107312 | Msa0331940:three_prime_UTR | 25.0% |
| !!! | TGAGTGATTTAATTTTATGG+GGG | + | chr2_4:48107294-48107313 | Msa0331940:three_prime_UTR | 25.0% |
| TGCATCACATCCATAAAATT+GGG | - | chr2_4:48101193-48101212 | None:intergenic | 30.0% | |
| TTGCATCACATCCATAAAAT+TGG | - | chr2_4:48101194-48101213 | None:intergenic | 30.0% | |
| ! | ATTTTATGGATGTGATGCAA+TGG | + | chr2_4:48101194-48101213 | Msa0331940:CDS | 30.0% |
| TGCAAATGCATCATATCATA+TGG | - | chr2_4:48101325-48101344 | None:intergenic | 30.0% | |
| !! | GCTCATTAAACATGTTTTGA+TGG | - | chr2_4:48101409-48101428 | None:intergenic | 30.0% |
| AACATGTTTAATGAGCTCAT+TGG | + | chr2_4:48101413-48101432 | Msa0331940:intron | 30.0% | |
| TTTAATTGCTAGAGTAGATG+AGG | - | chr2_4:48101746-48101765 | None:intergenic | 30.0% | |
| ! | CAGTTCCGTCTTAAAAATTT+TGG | + | chr2_4:48101856-48101875 | Msa0331940:intron | 30.0% |
| ! | AAAAATTTTGGGCTATGCAT+TGG | + | chr2_4:48101868-48101887 | Msa0331940:CDS | 30.0% |
| TTCAGTGTGTATTTCTTTGT+TGG | + | chr2_4:48101928-48101947 | Msa0331940:CDS | 30.0% | |
| ! | GATGATACAGAAGATCTTTT+CGG | - | chr2_4:48101956-48101975 | None:intergenic | 30.0% |
| ! | ACCGGTTATTTCAAATGTTA+TGG | + | chr2_4:48102160-48102179 | Msa0331940:CDS | 30.0% |
| !! | AAAGTATTGCCTACAACATA+TGG | + | chr2_4:48102278-48102297 | Msa0331940:CDS | 30.0% |
| GACAATGCATAATATATGCA+AGG | - | chr2_4:48102480-48102499 | None:intergenic | 30.0% | |
| TACCAAAAAAACACTTGATG+GGG | - | chr2_4:48102502-48102521 | None:intergenic | 30.0% | |
| ! | TGAGTATCTTGTTTATTCTC+AGG | + | chr2_4:48102599-48102618 | Msa0331940:intron | 30.0% |
| AAGATCAATAACTCGTTGAA+TGG | - | chr2_4:48102801-48102820 | None:intergenic | 30.0% | |
| !! | TCTTTTATTTGACAGACTTG+TGG | + | chr2_4:48102847-48102866 | Msa0331940:intron | 30.0% |
| CTGCAAGATTGTGATTTAAT+TGG | + | chr2_4:48103065-48103084 | Msa0331940:CDS | 30.0% | |
| CTCAATTACAGAAATGACAA+TGG | - | chr2_4:48103179-48103198 | None:intergenic | 30.0% | |
| ! | TGGTTATCTCCTTACATTTT+AGG | - | chr2_4:48103261-48103280 | None:intergenic | 30.0% |
| ! | AACTGTGAAGTGTTACATAT+TGG | - | chr2_4:48103281-48103300 | None:intergenic | 30.0% |
| TAAACTGACATTGAGTATAC+CGG | + | chr2_4:48103310-48103329 | Msa0331940:intron | 30.0% | |
| ATAACACAAGTTCAGTGAAT+TGG | - | chr2_4:48103338-48103357 | None:intergenic | 30.0% | |
| !! | ACTTCCATGTTTAATTTGTC+GGG | + | chr2_4:48103971-48103990 | Msa0331940:intron | 30.0% |
| TAACATTCTCAACCACATTA+CGG | - | chr2_4:48104087-48104106 | None:intergenic | 30.0% | |
| TATCTTGACCAATAAAGGTT+TGG | + | chr2_4:48104305-48104324 | Msa0331940:intron | 30.0% | |
| TATCAAGTCCAAACCTTTAT+TGG | - | chr2_4:48104316-48104335 | None:intergenic | 30.0% | |
| CGCATCATTATCATAACTAA+TGG | - | chr2_4:48104421-48104440 | None:intergenic | 30.0% | |
| AAGTGGATAGTCCATATTAT+AGG | - | chr2_4:48104479-48104498 | None:intergenic | 30.0% | |
| TTTAGCCAATAATTTGAGTC+AGG | + | chr2_4:48104706-48104725 | Msa0331940:CDS | 30.0% | |
| TAATATGCATGAATTGCAGA+GGG | - | chr2_4:48104797-48104816 | None:intergenic | 30.0% | |
| !! | AGATGATGAGGTACTAATTT+TGG | + | chr2_4:48104957-48104976 | Msa0331940:intron | 30.0% |
| ! | TAAATTCATTTGGTTGACTC+TGG | + | chr2_4:48105000-48105019 | Msa0331940:intron | 30.0% |
| TTATCTGTTGTATGAAATGC+AGG | + | chr2_4:48105123-48105142 | Msa0331940:intron | 30.0% | |
| ! | TGTTTCTTTTGTCGCATAAT+TGG | + | chr2_4:48105223-48105242 | Msa0331940:intron | 30.0% |
| CGCATAATTGGTAAATTTGT+TGG | + | chr2_4:48105235-48105254 | Msa0331940:intron | 30.0% | |
| AAGTGAAATAATATCAGTGG+AGG | + | chr2_4:48105344-48105363 | Msa0331940:intron | 30.0% | |
| AGTGAAATAATATCAGTGGA+GGG | + | chr2_4:48105345-48105364 | Msa0331940:intron | 30.0% | |
| ATCTTAATGAGTGAAATTCC+TGG | + | chr2_4:48105403-48105422 | Msa0331940:intron | 30.0% | |
| ! | TCTTGAAGTTTTCCATACAA+TGG | - | chr2_4:48105460-48105479 | None:intergenic | 30.0% |
| GTACAAAACTCATTCTTACA+TGG | - | chr2_4:48105550-48105569 | None:intergenic | 30.0% | |
| AGCAATTTGCAAGTTAACAA+AGG | - | chr2_4:48105606-48105625 | None:intergenic | 30.0% | |
| ATTGCTTATAGATCCTGTAA+TGG | + | chr2_4:48105620-48105639 | Msa0331940:intron | 30.0% | |
| TTGCTTATAGATCCTGTAAT+GGG | + | chr2_4:48105621-48105640 | Msa0331940:intron | 30.0% | |
| AGAAAACTGGAAATATGATC+AGG | - | chr2_4:48105664-48105683 | None:intergenic | 30.0% | |
| AACTAAAACCGAAACATCTT+CGG | - | chr2_4:48105771-48105790 | None:intergenic | 30.0% | |
| CAATCAAAATAGACAGCATA+AGG | + | chr2_4:48105875-48105894 | Msa0331940:intron | 30.0% | |
| TCCATACAACAGAATTAAGT+GGG | - | chr2_4:48106157-48106176 | None:intergenic | 30.0% | |
| ATCCATACAACAGAATTAAG+TGG | - | chr2_4:48106158-48106177 | None:intergenic | 30.0% | |
| ATGGATGAGATAAACTTGAA+CGG | + | chr2_4:48106348-48106367 | Msa0331940:CDS | 30.0% | |
| !! | CTTTTGGAGAACTAGAATTA+GGG | - | chr2_4:48106746-48106765 | None:intergenic | 30.0% |
| ! | GATAAAACAGATTCTGCTTT+TGG | - | chr2_4:48106762-48106781 | None:intergenic | 30.0% |
| ! | GCAGAATCTGTTTTATCTAA+TGG | + | chr2_4:48106765-48106784 | Msa0331940:CDS | 30.0% |
| CTAGTAAAGATTTGATTGAC+GGG | + | chr2_4:48106796-48106815 | Msa0331940:CDS | 30.0% | |
| TAGTAAAGATTTGATTGACG+GGG | + | chr2_4:48106797-48106816 | Msa0331940:CDS | 30.0% | |
| GAAAAGGAAAATACTGAAGA+CGG | + | chr2_4:48106990-48107009 | Msa0331940:CDS | 30.0% | |
| ! | AATCATGCTTTATTGCTGTA+TGG | + | chr2_4:48107103-48107122 | Msa0331940:three_prime_UTR | 30.0% |
| TTTATTGCTGTATGGAAAGT+TGG | + | chr2_4:48107111-48107130 | Msa0331940:three_prime_UTR | 30.0% | |
| TAGTAAGCGTGAAAAGAAAT+AGG | - | chr2_4:48107227-48107246 | None:intergenic | 30.0% | |
| GTATCTTTACCAATGTTATG+CGG | - | chr2_4:48107485-48107504 | None:intergenic | 30.0% | |
| TATCAACAATCATCTCAAGC+AGG | - | chr2_4:48101234-48101253 | None:intergenic | 35.0% | |
| ATAGATGGTTCACTTACAGA+TGG | - | chr2_4:48101265-48101284 | None:intergenic | 35.0% | |
| AGAGCAAAAACTTGGATAGA+TGG | - | chr2_4:48101280-48101299 | None:intergenic | 35.0% | |
| ATATGGCTAACATGTAAAGC+TGG | - | chr2_4:48101308-48101327 | None:intergenic | 35.0% | |
| ! | TTTTGATGGGGTACATCTAA+GGG | - | chr2_4:48101395-48101414 | None:intergenic | 35.0% |
| ATGTTTAATGAGCTCATTGG+AGG | + | chr2_4:48101416-48101435 | Msa0331940:intron | 35.0% | |
| !! | AGGTCACACTCTTTGATTTT+GGG | + | chr2_4:48101436-48101455 | Msa0331940:intron | 35.0% |
| AACAGAAAAATGAACTTCCG+GGG | - | chr2_4:48101530-48101549 | None:intergenic | 35.0% | |
| GAACAGAAAAATGAACTTCC+GGG | - | chr2_4:48101531-48101550 | None:intergenic | 35.0% | |
| GGAACAGAAAAATGAACTTC+CGG | - | chr2_4:48101532-48101551 | None:intergenic | 35.0% | |
| ACATAAAGTTTCAGCTGCAT+TGG | - | chr2_4:48101707-48101726 | None:intergenic | 35.0% | |
| ! | AAGCTTTTAGATGCAAACCT+CGG | - | chr2_4:48101778-48101797 | None:intergenic | 35.0% |
| GTTTGCATCTAAAAGCTTCA+TGG | + | chr2_4:48101780-48101799 | Msa0331940:intron | 35.0% | |
| CTTCGGAATGAATGAAAAAG+GGG | - | chr2_4:48101980-48101999 | None:intergenic | 35.0% | |
| GCTTCGGAATGAATGAAAAA+GGG | - | chr2_4:48101981-48102000 | None:intergenic | 35.0% | |
| TCTGGATTTACAGGAATATG+TGG | - | chr2_4:48102019-48102038 | None:intergenic | 35.0% | |
| AATCCCACTTACTGAGTTTA+GGG | - | chr2_4:48102060-48102079 | None:intergenic | 35.0% | |
| AAATCCCACTTACTGAGTTT+AGG | - | chr2_4:48102061-48102080 | None:intergenic | 35.0% | |
| ATTACCCAAGCTTTCGATTT+AGG | + | chr2_4:48102131-48102150 | Msa0331940:intron | 35.0% | |
| TTTCGATTTAGGTGCAAAAC+CGG | + | chr2_4:48102142-48102161 | Msa0331940:intron | 35.0% | |
| TGTAGGCAATACTTTCTCAT+CGG | - | chr2_4:48102273-48102292 | None:intergenic | 35.0% | |
| CTCAATTCTCCATATGTTGT+AGG | - | chr2_4:48102290-48102309 | None:intergenic | 35.0% | |
| TTTAATCTATGCTTCCCAAG+CGG | - | chr2_4:48102317-48102336 | None:intergenic | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | - | chr2_4:48102473-48102492 | None:intergenic | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | - | chr2_4:48102474-48102493 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+TGG | - | chr2_4:48102475-48102494 | None:intergenic | 35.0% | |
| ! | TTTTCAGATTGTCGAGTTCA+TGG | + | chr2_4:48102718-48102737 | Msa0331940:intron | 35.0% |
| !! | CTTCATTTCCGGTTTTTAAG+AGG | - | chr2_4:48102748-48102767 | None:intergenic | 35.0% |
| TGTGTGTGATCTATTAATGC+AGG | + | chr2_4:48102952-48102971 | Msa0331940:intron | 35.0% | |
| TTGCAGAAGATGATCAACAA+CGG | - | chr2_4:48103051-48103070 | None:intergenic | 35.0% | |
| GAACAGATTGTTTATCTGCT+TGG | - | chr2_4:48103100-48103119 | None:intergenic | 35.0% | |
| GAAAACGCTCCTAAAATGTA+AGG | + | chr2_4:48103249-48103268 | Msa0331940:intron | 35.0% | |
| ATATCTAAGCAGAATGGTCA+AGG | - | chr2_4:48103581-48103600 | None:intergenic | 35.0% | |
| AAGGTTAATTCAACAACCAG+AGG | - | chr2_4:48103916-48103935 | None:intergenic | 35.0% | |
| CTATCCCGACAAATTAAACA+TGG | - | chr2_4:48103978-48103997 | None:intergenic | 35.0% | |
| AAAATAGTGAGTGGAGTGAA+TGG | + | chr2_4:48104041-48104060 | Msa0331940:CDS | 35.0% | |
| ! | ATCCTTAGCAACGTTTTACA+AGG | + | chr2_4:48104154-48104173 | Msa0331940:intron | 35.0% |
| CTCATGCATAAAGTCTTTGT+TGG | + | chr2_4:48104205-48104224 | Msa0331940:intron | 35.0% | |
| !! | CTTTGTTGGAAGTGTTGAAT+TGG | + | chr2_4:48104219-48104238 | Msa0331940:intron | 35.0% |
| TGTAGTACTGTAATTGTCAG+CGG | + | chr2_4:48104243-48104262 | Msa0331940:intron | 35.0% | |
| CTTTATTGGTCAAGATAACC+GGG | - | chr2_4:48104302-48104321 | None:intergenic | 35.0% | |
| CCTTTATTGGTCAAGATAAC+CGG | - | chr2_4:48104303-48104322 | None:intergenic | 35.0% | |
| AAACGTAAAAGGATCAACCA+AGG | - | chr2_4:48104534-48104553 | None:intergenic | 35.0% | |
| ATCCTATCTTGTAAAGCAGT+CGG | - | chr2_4:48104635-48104654 | None:intergenic | 35.0% | |
| TGCTTTACAAGATAGGATGA+GGG | + | chr2_4:48104637-48104656 | Msa0331940:CDS | 35.0% | |
| AAAGGCCTGACTCAAATTAT+TGG | - | chr2_4:48104714-48104733 | None:intergenic | 35.0% | |
| GTAATATGCATGAATTGCAG+AGG | - | chr2_4:48104798-48104817 | None:intergenic | 35.0% | |
| !!! | GTTTTGATTGTCTTTGTTGC+AGG | + | chr2_4:48104915-48104934 | Msa0331940:intron | 35.0% |
| AGACAATTTGGCTATGACTT+GGG | - | chr2_4:48105047-48105066 | None:intergenic | 35.0% | |
| AAGACAATTTGGCTATGACT+TGG | - | chr2_4:48105048-48105067 | None:intergenic | 35.0% | |
| AAGTCATAGCCAAATTGTCT+TGG | + | chr2_4:48105047-48105066 | Msa0331940:intron | 35.0% | |
| AGTCATAGCCAAATTGTCTT+GGG | + | chr2_4:48105048-48105067 | Msa0331940:intron | 35.0% | |
| ! | GTTTTTGTCCCAAGACAATT+TGG | - | chr2_4:48105059-48105078 | None:intergenic | 35.0% |
| TCCACATGAAATCCATTGTA+TGG | + | chr2_4:48105445-48105464 | Msa0331940:intron | 35.0% | |
| ! | TCCATACAATGGATTTCATG+TGG | - | chr2_4:48105449-48105468 | None:intergenic | 35.0% |
| ATCAAGAAATCACCCATTAC+AGG | - | chr2_4:48105636-48105655 | None:intergenic | 35.0% | |
| TGACAGCTATACTAGAAAAC+TGG | - | chr2_4:48105677-48105696 | None:intergenic | 35.0% | |
| ! | AGTTTTCTACTTCATCACGT+TGG | + | chr2_4:48105787-48105806 | Msa0331940:intron | 35.0% |
| GATTCAAAACATGAAACCTG+TGG | - | chr2_4:48105904-48105923 | None:intergenic | 35.0% | |
| TCTGAAGAAACCCATATCAT+TGG | - | chr2_4:48106559-48106578 | None:intergenic | 35.0% | |
| TATGGGTTTCTTCAGATTTG+AGG | + | chr2_4:48106563-48106582 | Msa0331940:CDS | 35.0% | |
| ! | CTATTTGAGGCTTAGTTGAA+AGG | - | chr2_4:48106719-48106738 | None:intergenic | 35.0% |
| CTTTCAACTAAGCCTCAAAT+AGG | + | chr2_4:48106717-48106736 | Msa0331940:CDS | 35.0% | |
| !! | GCTTTTGGAGAACTAGAATT+AGG | - | chr2_4:48106747-48106766 | None:intergenic | 35.0% |
| ACATCTTCCTCAAATAGTGA+TGG | - | chr2_4:48106855-48106874 | None:intergenic | 35.0% | |
| GAGGAAGATGTTGAATTTGT+AGG | + | chr2_4:48106864-48106883 | Msa0331940:CDS | 35.0% | |
| AATTCAACGATGCGAATTAC+TGG | + | chr2_4:48107030-48107049 | Msa0331940:CDS | 35.0% | |
| AGAGCGAATTCGATAAATGT+GGG | - | chr2_4:48107323-48107342 | None:intergenic | 35.0% | |
| !! | TGTGACTTGTACGTTTTGTA+TGG | + | chr2_4:48107446-48107465 | Msa0331940:three_prime_UTR | 35.0% |
| ACTGAAATTCCGCATAACAT+TGG | + | chr2_4:48107473-48107492 | Msa0331940:three_prime_UTR | 35.0% | |
| CCATAAAATTGGGATACACG+TGG | - | chr2_4:48101183-48101202 | None:intergenic | 40.0% | |
| ! | CCACGTGTATCCCAATTTTA+TGG | + | chr2_4:48101180-48101199 | Msa0331940:CDS | 40.0% |
| TATGGATGTGATGCAATGGT+TGG | + | chr2_4:48101198-48101217 | Msa0331940:CDS | 40.0% | |
| TGGCTCAAAGAGCAAAAACT+TGG | - | chr2_4:48101288-48101307 | None:intergenic | 40.0% | |
| TCATGCAGCTAAAACATGTC+TGG | - | chr2_4:48101364-48101383 | None:intergenic | 40.0% | |
| !! | GTTTTGATGGGGTACATCTA+AGG | - | chr2_4:48101396-48101415 | None:intergenic | 40.0% |
| !! | GAGGTCACACTCTTTGATTT+TGG | + | chr2_4:48101435-48101454 | Msa0331940:intron | 40.0% |
| ACAGAAAAATGAACTTCCGG+GGG | - | chr2_4:48101529-48101548 | None:intergenic | 40.0% | |
| !! | CAGGACACTGGTTTAAATAG+GGG | - | chr2_4:48101672-48101691 | None:intergenic | 40.0% |
| !! | GCAGGACACTGGTTTAAATA+GGG | - | chr2_4:48101673-48101692 | None:intergenic | 40.0% |
| ! | AGCTGCATTGGCATTAACTT+CGG | - | chr2_4:48101695-48101714 | None:intergenic | 40.0% |
| ! | AGCTTTTAGATGCAAACCTC+GGG | - | chr2_4:48101777-48101796 | None:intergenic | 40.0% |
| ACACTGAAAGTGAGTTCACA+AGG | - | chr2_4:48101916-48101935 | None:intergenic | 40.0% | |
| GGCTTCGGAATGAATGAAAA+AGG | - | chr2_4:48101982-48102001 | None:intergenic | 40.0% | |
| TATGTGGCTCATACATGTGT+TGG | - | chr2_4:48102003-48102022 | None:intergenic | 40.0% | |
| CCAATTGTCTCTGGATTTAC+AGG | - | chr2_4:48102028-48102047 | None:intergenic | 40.0% | |
| CCTGTAAATCCAGAGACAAT+TGG | + | chr2_4:48102025-48102044 | Msa0331940:CDS | 40.0% | |
| TGCACCTAAATCGAAAGCTT+GGG | - | chr2_4:48102138-48102157 | None:intergenic | 40.0% | |
| TTGCACCTAAATCGAAAGCT+TGG | - | chr2_4:48102139-48102158 | None:intergenic | 40.0% | |
| ATTGTCCACATCACATCATC+AGG | + | chr2_4:48102201-48102220 | Msa0331940:CDS | 40.0% | |
| TTGTCCACATCACATCATCA+GGG | + | chr2_4:48102202-48102221 | Msa0331940:CDS | 40.0% | |
| ! | GCTTGGGAAGCATAGATTAA+AGG | + | chr2_4:48102316-48102335 | Msa0331940:CDS | 40.0% |
| ! | TTGAAACCACGGATTACGTA+AGG | - | chr2_4:48102394-48102413 | None:intergenic | 40.0% |
| !!! | TGTTTTTTTTTGGTGGTGGC+TGG | + | chr2_4:48102439-48102458 | Msa0331940:intron | 40.0% |
| !!! | GTTTTTTTTTGGTGGTGGCT+GGG | + | chr2_4:48102440-48102459 | Msa0331940:intron | 40.0% |
| !!! | TTTTTTTTTGGTGGTGGCTG+GGG | + | chr2_4:48102441-48102460 | Msa0331940:intron | 40.0% |
| !!! | GTCCCCATCAAGTGTTTTTT+TGG | + | chr2_4:48102497-48102516 | Msa0331940:intron | 40.0% |
| ATGGCAGTCCTCTTAAAAAC+CGG | + | chr2_4:48102737-48102756 | Msa0331940:CDS | 40.0% | |
| ! | CTTTTCTGCAGCTTCATTTC+CGG | - | chr2_4:48102759-48102778 | None:intergenic | 40.0% |
| TGAAGCTGCAGAAAAGGAAA+TGG | + | chr2_4:48102763-48102782 | Msa0331940:CDS | 40.0% | |
| GAAAAGGAAATGGTCAACTC+AGG | + | chr2_4:48102773-48102792 | Msa0331940:CDS | 40.0% | |
| TCCATGTACCAGATTTCTGT+CGG | - | chr2_4:48103129-48103148 | None:intergenic | 40.0% | |
| ! | CAAGTTCAGTGAATTGGTTC+CGG | - | chr2_4:48103332-48103351 | None:intergenic | 40.0% |
| TTCATGAACAGCTAACCTGA+AGG | - | chr2_4:48103484-48103503 | None:intergenic | 40.0% | |
| TGGTCAAGGATAGCAATTCA+AGG | - | chr2_4:48103567-48103586 | None:intergenic | 40.0% | |
| ! | ACTTGTTTGGAGTAAGCTTG+TGG | + | chr2_4:48103619-48103638 | Msa0331940:intron | 40.0% |
| ! | CTTGACAAAACGAGCTTTAG+AGG | - | chr2_4:48103671-48103690 | None:intergenic | 40.0% |
| !!! | CTCTAAAGCTCGTTTTGTCA+AGG | + | chr2_4:48103669-48103688 | Msa0331940:intron | 40.0% |
| ! | AAGCTCGTTTTGTCAAGGAT+TGG | + | chr2_4:48103674-48103693 | Msa0331940:intron | 40.0% |
| ! | AGCTCGTTTTGTCAAGGATT+GGG | + | chr2_4:48103675-48103694 | Msa0331940:intron | 40.0% |
| ACTAAGGTGTACTGCATATC+AGG | - | chr2_4:48103703-48103722 | None:intergenic | 40.0% | |
| GACACACGAAAAGCTTGATA+AGG | - | chr2_4:48103773-48103792 | None:intergenic | 40.0% | |
| GCATCTAAAGATAAAGCCTC+TGG | + | chr2_4:48103897-48103916 | Msa0331940:intron | 40.0% | |
| AGTCTCTATGATGCAATGCA+AGG | - | chr2_4:48103935-48103954 | None:intergenic | 40.0% | |
| TGCATTGCATCATAGAGACT+AGG | + | chr2_4:48103935-48103954 | Msa0331940:intron | 40.0% | |
| ATGTGGTGTTCTTAACATGC+AGG | + | chr2_4:48104018-48104037 | Msa0331940:intron | 40.0% | |
| ACATGCAGGAAAATAGTGAG+TGG | + | chr2_4:48104032-48104051 | Msa0331940:intron | 40.0% | |
| TGGTTGAGAATGTTAACCGT+TGG | + | chr2_4:48104092-48104111 | Msa0331940:CDS | 40.0% | |
| GGTTGAGAATGTTAACCGTT+GGG | + | chr2_4:48104093-48104112 | Msa0331940:CDS | 40.0% | |
| CTCCTTGTAAAACGTTGCTA+AGG | - | chr2_4:48104159-48104178 | None:intergenic | 40.0% | |
| ! | CTTAGCAACGTTTTACAAGG+AGG | + | chr2_4:48104157-48104176 | Msa0331940:intron | 40.0% |
| CCGGTTATCTTGACCAATAA+AGG | + | chr2_4:48104300-48104319 | Msa0331940:intron | 40.0% | |
| TCCTATCTTGTAAAGCAGTC+GGG | - | chr2_4:48104634-48104653 | None:intergenic | 40.0% | |
| CTGCTTTACAAGATAGGATG+AGG | + | chr2_4:48104636-48104655 | Msa0331940:CDS | 40.0% | |
| ! | ATGATGACGACATTCATGAC+AGG | + | chr2_4:48104666-48104685 | Msa0331940:CDS | 40.0% |
| ! | TGATGACGACATTCATGACA+GGG | + | chr2_4:48104667-48104686 | Msa0331940:CDS | 40.0% |
| TGGGAATGAGGATAATGAAG+AGG | + | chr2_4:48104748-48104767 | Msa0331940:CDS | 40.0% | |
| GTTGCAGTGCTCAACTAAAA+AGG | - | chr2_4:48104878-48104897 | None:intergenic | 40.0% | |
| CAAAAACACCTGGGAATACT+TGG | + | chr2_4:48105072-48105091 | Msa0331940:intron | 40.0% | |
| ATGTGGAAGATGCAGCATTT+AGG | - | chr2_4:48105432-48105451 | None:intergenic | 40.0% | |
| CAAGATGACTGCATAGTAGT+AGG | + | chr2_4:48105475-48105494 | Msa0331940:intron | 40.0% | |
| ! | TTTCAGCACCGAAGATGTTT+CGG | + | chr2_4:48105760-48105779 | Msa0331940:intron | 40.0% |
| GCCCACTTAATTCTGTTGTA+TGG | + | chr2_4:48106153-48106172 | Msa0331940:intron | 40.0% | |
| ! | CACAACATCATCTGAGATGA+TGG | + | chr2_4:48106329-48106348 | Msa0331940:CDS | 40.0% |
| TCTAGCACAAACTTCTTCAG+TGG | + | chr2_4:48106468-48106487 | Msa0331940:CDS | 40.0% | |
| !! | AACTTCTTCAGTGGATTACC+AGG | + | chr2_4:48106477-48106496 | Msa0331940:CDS | 40.0% |
| ! | TCAGACAAGGAAGAGAGTTT+TGG | + | chr2_4:48106588-48106607 | Msa0331940:CDS | 40.0% |
| !! | AGGAAGAGAGTTTTGGTGAT+AGG | + | chr2_4:48106595-48106614 | Msa0331940:CDS | 40.0% |
| ! | CCAGTAACTTGCATATCTGA+AGG | - | chr2_4:48106651-48106670 | None:intergenic | 40.0% |
| CCTTCAGATATGCAAGTTAC+TGG | + | chr2_4:48106648-48106667 | Msa0331940:CDS | 40.0% | |
| GACTCATCATGATCCACAAA+GGG | - | chr2_4:48106687-48106706 | None:intergenic | 40.0% | |
| AGACTCATCATGATCCACAA+AGG | - | chr2_4:48106688-48106707 | None:intergenic | 40.0% | |
| TTTGTGGATCATGATGAGTC+TGG | + | chr2_4:48106687-48106706 | Msa0331940:CDS | 40.0% | |
| GAATTAGGGCTACCTATTTG+AGG | - | chr2_4:48106732-48106751 | None:intergenic | 40.0% | |
| AAAGATTTGATTGACGGGGT+TGG | + | chr2_4:48106801-48106820 | Msa0331940:CDS | 40.0% | |
| AGCTGTACCATCACTATTTG+AGG | + | chr2_4:48106845-48106864 | Msa0331940:CDS | 40.0% | |
| TTTGTAGGCGTAGAGTTAGA+AGG | + | chr2_4:48106879-48106898 | Msa0331940:CDS | 40.0% | |
| !! | AGAAGGTACTGAGAAAGCTA+TGG | + | chr2_4:48106896-48106915 | Msa0331940:CDS | 40.0% |
| TACTGAGAAAGCTATGGAAC+AGG | + | chr2_4:48106902-48106921 | Msa0331940:CDS | 40.0% | |
| !!! | TTTCCTTTTCTGCCGCTTTA+GGG | - | chr2_4:48106980-48106999 | None:intergenic | 40.0% |
| !!! | TTTTCCTTTTCTGCCGCTTT+AGG | - | chr2_4:48106981-48107000 | None:intergenic | 40.0% |
| AAACCAAGAATCAGGTCCAT+CGG | - | chr2_4:48107149-48107168 | None:intergenic | 40.0% | |
| CAGAGCGAATTCGATAAATG+TGG | - | chr2_4:48107324-48107343 | None:intergenic | 40.0% | |
| !!! | TTCGCTCTGCTCTTTGTTTT+TGG | + | chr2_4:48107335-48107354 | Msa0331940:three_prime_UTR | 40.0% |
| CTAATAAGCCCTCGTGTATT+TGG | + | chr2_4:48107376-48107395 | Msa0331940:three_prime_UTR | 40.0% | |
| AAACGTACAAGTCACAGAGA+AGG | - | chr2_4:48107442-48107461 | None:intergenic | 40.0% | |
| GCAGCTAAAACATGTCTGGA+TGG | - | chr2_4:48101360-48101379 | None:intergenic | 45.0% | |
| !! | GGCAGGACACTGGTTTAAAT+AGG | - | chr2_4:48101674-48101693 | None:intergenic | 45.0% |
| CAATTAAACTCTCAAGCCCG+AGG | + | chr2_4:48101758-48101777 | Msa0331940:CDS | 45.0% | |
| !! | GCTCATACATGTGTTGGCTT+CGG | - | chr2_4:48101997-48102016 | None:intergenic | 45.0% |
| AGCATTGCACCAATTGTCTC+TGG | - | chr2_4:48102037-48102056 | None:intergenic | 45.0% | |
| TGCTCCCTAAACTCAGTAAG+TGG | + | chr2_4:48102053-48102072 | Msa0331940:intron | 45.0% | |
| GCTCCCTAAACTCAGTAAGT+GGG | + | chr2_4:48102054-48102073 | Msa0331940:intron | 45.0% | |
| ! | AAAGCCCTGATGATGTGATG+TGG | - | chr2_4:48102209-48102228 | None:intergenic | 45.0% |
| TTAGCAACTCACCTGCAGAA+AGG | - | chr2_4:48102232-48102251 | None:intergenic | 45.0% | |
| TGATTTCCCCCATCAAGTGT+TGG | + | chr2_4:48102349-48102368 | Msa0331940:intron | 45.0% | |
| GATTTCCCCCATCAAGTGTT+GGG | + | chr2_4:48102350-48102369 | Msa0331940:intron | 45.0% | |
| ! | ATTTCCCCCATCAAGTGTTG+GGG | + | chr2_4:48102351-48102370 | Msa0331940:intron | 45.0% |
| ! | AACCACGGATTACGTAAGGT+GGG | - | chr2_4:48102390-48102409 | None:intergenic | 45.0% |
| ! | AAACCACGGATTACGTAAGG+TGG | - | chr2_4:48102391-48102410 | None:intergenic | 45.0% |
| CGGAAATGAAGCTGCAGAAA+AGG | + | chr2_4:48102757-48102776 | Msa0331940:CDS | 45.0% | |
| TCTCTCTTCCGACAGAAATC+TGG | + | chr2_4:48103118-48103137 | Msa0331940:CDS | 45.0% | |
| TCCGACAGAAATCTGGTACA+TGG | + | chr2_4:48103125-48103144 | Msa0331940:intron | 45.0% | |
| ! | TGTTTGGAGTAAGCTTGTGG+TGG | + | chr2_4:48103622-48103641 | Msa0331940:intron | 45.0% |
| TCATAGAGACTAGGACCATG+AGG | + | chr2_4:48103944-48103963 | Msa0331940:intron | 45.0% | |
| AACATGGAAGTTCAGCCTCA+TGG | - | chr2_4:48103962-48103981 | None:intergenic | 45.0% | |
| ! | GCAACGTTTTACAAGGAGGT+TGG | + | chr2_4:48104161-48104180 | Msa0331940:intron | 45.0% |
| TACTGTAATTGTCAGCGGCT+AGG | + | chr2_4:48104248-48104267 | Msa0331940:intron | 45.0% | |
| TCGCAAGACCAACCATGTAA+GGG | - | chr2_4:48104279-48104298 | None:intergenic | 45.0% | |
| TCAAGGGAAGTCACAATCCT+TGG | + | chr2_4:48104514-48104533 | Msa0331940:intron | 45.0% | |
| ! | GAGCACTGCAACTTAAATGC+TGG | + | chr2_4:48104886-48104905 | Msa0331940:intron | 45.0% |
| TTGTCTTTGTTGCAGGAACG+TGG | + | chr2_4:48104922-48104941 | Msa0331940:intron | 45.0% | |
| CAACCATGATCGAGATGATG+AGG | + | chr2_4:48104945-48104964 | Msa0331940:CDS | 45.0% | |
| GTACCTCATCATCTCGATCA+TGG | - | chr2_4:48104951-48104970 | None:intergenic | 45.0% | |
| TGTCTTGGGACAAAAACACC+TGG | + | chr2_4:48105062-48105081 | Msa0331940:intron | 45.0% | |
| GTCTTGGGACAAAAACACCT+GGG | + | chr2_4:48105063-48105082 | Msa0331940:intron | 45.0% | |
| CCAAAAAGCCAAGTATTCCC+AGG | - | chr2_4:48105083-48105102 | None:intergenic | 45.0% | |
| !! | CCTGGGAATACTTGGCTTTT+TGG | + | chr2_4:48105080-48105099 | Msa0331940:intron | 45.0% |
| GTCATATCGTCCCTAAGACT+CGG | + | chr2_4:48105178-48105197 | Msa0331940:CDS | 45.0% | |
| GATGCAGCATTTAGGAAACC+AGG | - | chr2_4:48105424-48105443 | None:intergenic | 45.0% | |
| GTCTGTTTACGAACTCCAAC+TGG | + | chr2_4:48106265-48106284 | Msa0331940:CDS | 45.0% | |
| GTCTTGGAATGCAAACCAGT+TGG | - | chr2_4:48106283-48106302 | None:intergenic | 45.0% | |
| TGCATTCCAAGACGACAGAA+TGG | + | chr2_4:48106290-48106309 | Msa0331940:CDS | 45.0% | |
| GCATTCCAAGACGACAGAAT+GGG | + | chr2_4:48106291-48106310 | Msa0331940:CDS | 45.0% | |
| GACAGAATGGGTGATGCAAA+CGG | + | chr2_4:48106303-48106322 | Msa0331940:CDS | 45.0% | |
| !! | AACTTGAACGGTGCTGCTAA+TGG | + | chr2_4:48106360-48106379 | Msa0331940:CDS | 45.0% |
| TGGTAACAACAGTGACGATG+AGG | + | chr2_4:48106383-48106402 | Msa0331940:CDS | 45.0% | |
| GGTTGGAGAGGATGAAGAAT+TGG | + | chr2_4:48106410-48106429 | Msa0331940:CDS | 45.0% | |
| GGATTACCAGGTAGCAATTC+CGG | + | chr2_4:48106489-48106508 | Msa0331940:CDS | 45.0% | |
| GATTACCAGGTAGCAATTCC+GGG | + | chr2_4:48106490-48106509 | Msa0331940:CDS | 45.0% | |
| ! | TGCAAGTGCTGCCAATGATA+TGG | + | chr2_4:48106545-48106564 | Msa0331940:CDS | 45.0% |
| ! | GCAAGTGCTGCCAATGATAT+GGG | + | chr2_4:48106546-48106565 | Msa0331940:CDS | 45.0% |
| ! | CAGATTTGAGGCATCAGACA+AGG | + | chr2_4:48106575-48106594 | Msa0331940:CDS | 45.0% |
| TGATAGGCCTTTGCCTGATT+GGG | + | chr2_4:48106611-48106630 | Msa0331940:CDS | 45.0% | |
| TGCAAGCATGAATCCCTTTG+TGG | + | chr2_4:48106671-48106690 | Msa0331940:CDS | 45.0% | |
| !! | TATGGAACAGGCTCTGAAAG+AGG | + | chr2_4:48106914-48106933 | Msa0331940:CDS | 45.0% |
| !! | ATGGAACAGGCTCTGAAAGA+GGG | + | chr2_4:48106915-48106934 | Msa0331940:CDS | 45.0% |
| !! | GCTCTGAAAGAGGGAATAGT+CGG | + | chr2_4:48106924-48106943 | Msa0331940:CDS | 45.0% |
| ! | CTCTGAAAGAGGGAATAGTC+GGG | + | chr2_4:48106925-48106944 | Msa0331940:CDS | 45.0% |
| TCTGAAAGAGGGAATAGTCG+GGG | + | chr2_4:48106926-48106945 | Msa0331940:CDS | 45.0% | |
| ! | GGGGACACGTTTCTTTTCAA+TGG | - | chr2_4:48106960-48106979 | None:intergenic | 45.0% |
| AAGAAACGTGTCCCCTAAAG+CGG | + | chr2_4:48106965-48106984 | Msa0331940:CDS | 45.0% | |
| !!! | TTCCTTTTCTGCCGCTTTAG+GGG | - | chr2_4:48106979-48106998 | None:intergenic | 45.0% |
| CGTTGAATTCCTTCATCCCT+GGG | - | chr2_4:48107019-48107038 | None:intergenic | 45.0% | |
| TCGTTGAATTCCTTCATCCC+TGG | - | chr2_4:48107020-48107039 | None:intergenic | 45.0% | |
| TCAACGATGCGAATTACTGG+AGG | + | chr2_4:48107033-48107052 | Msa0331940:CDS | 45.0% | |
| CAACGATGCGAATTACTGGA+GGG | + | chr2_4:48107034-48107053 | Msa0331940:CDS | 45.0% | |
| !! | CTCTGGAGTGATGAGCATAA+TGG | + | chr2_4:48107075-48107094 | Msa0331940:exon | 45.0% |
| TGGAGTGATGAGCATAATGG+TGG | + | chr2_4:48107078-48107097 | Msa0331940:exon | 45.0% | |
| TTGGACATCAACAACACCGA+TGG | + | chr2_4:48107130-48107149 | Msa0331940:three_prime_UTR | 45.0% | |
| !! | GACCTGATTCTTGGTTTGCA+GGG | + | chr2_4:48107152-48107171 | Msa0331940:three_prime_UTR | 45.0% |
| !! | ACCTGATTCTTGGTTTGCAG+GGG | + | chr2_4:48107153-48107172 | Msa0331940:three_prime_UTR | 45.0% |
| AGGGCTTATTAGCATCAACG+TGG | - | chr2_4:48107368-48107387 | None:intergenic | 45.0% | |
| !! | ATATTAAAAAATTATATCAT+GGG | + | chr2_4:48105843-48105862 | Msa0331940:intron | 5.0% |
| TGTCATCATGAGTTTGCCCC+CGG | + | chr2_4:48101510-48101529 | Msa0331940:intron | 50.0% | |
| CATTAACTTCGGCAGGACAC+TGG | - | chr2_4:48101684-48101703 | None:intergenic | 50.0% | |
| ! | GCATTGGCATTAACTTCGGC+AGG | - | chr2_4:48101691-48101710 | None:intergenic | 50.0% |
| ATCAGGGCTTTCCTTTCTGC+AGG | + | chr2_4:48102218-48102237 | Msa0331940:CDS | 50.0% | |
| GAGAATTGAGACCTCCGCTT+GGG | + | chr2_4:48102300-48102319 | Msa0331940:CDS | 50.0% | |
| AATCTATGCTTCCCAAGCGG+AGG | - | chr2_4:48102314-48102333 | None:intergenic | 50.0% | |
| AACTCCCCAACACTTGATGG+GGG | - | chr2_4:48102358-48102377 | None:intergenic | 50.0% | |
| CAACTCCCCAACACTTGATG+GGG | - | chr2_4:48102359-48102378 | None:intergenic | 50.0% | |
| GCAACTCCCCAACACTTGAT+GGG | - | chr2_4:48102360-48102379 | None:intergenic | 50.0% | |
| AGCAACTCCCCAACACTTGA+TGG | - | chr2_4:48102361-48102380 | None:intergenic | 50.0% | |
| !! | CAAGTGTTGGGGAGTTGCTA+TGG | + | chr2_4:48102362-48102381 | Msa0331940:intron | 50.0% |
| TTTCCAGCAGCAGGTACAGT+TGG | - | chr2_4:48103368-48103387 | None:intergenic | 50.0% | |
| TGTACCTGCTGCTGGAAAAC+AGG | + | chr2_4:48103370-48103389 | Msa0331940:CDS | 50.0% | |
| CACATTACGGTCCTGAAGCA+CGG | - | chr2_4:48104074-48104093 | None:intergenic | 50.0% | |
| AATGTTAACCGTTGGGCGTG+TGG | + | chr2_4:48104100-48104119 | Msa0331940:CDS | 50.0% | |
| ATGTTAACCGTTGGGCGTGT+GGG | + | chr2_4:48104101-48104120 | Msa0331940:CDS | 50.0% | |
| AGACCAACCATGTAAGGGTG+TGG | - | chr2_4:48104274-48104293 | None:intergenic | 50.0% | |
| GTCGCAAGACCAACCATGTA+AGG | - | chr2_4:48104280-48104299 | None:intergenic | 50.0% | |
| GCCCGACTGCTTTACAAGAT+AGG | + | chr2_4:48104630-48104649 | Msa0331940:CDS | 50.0% | |
| TGAATTGCAGAGGGAAGAGG+AGG | - | chr2_4:48104788-48104807 | None:intergenic | 50.0% | |
| GCATGAATTGCAGAGGGAAG+AGG | - | chr2_4:48104791-48104810 | None:intergenic | 50.0% | |
| CTGGTCATCACCGAGTCTTA+GGG | - | chr2_4:48105191-48105210 | None:intergenic | 50.0% | |
| !! | CTAAGACTCGGTGATGACCA+GGG | + | chr2_4:48105190-48105209 | Msa0331940:CDS | 50.0% |
| !! | TAAGACTCGGTGATGACCAG+GGG | + | chr2_4:48105191-48105210 | Msa0331940:CDS | 50.0% |
| AGACAGCATAAGGACACCAC+AGG | + | chr2_4:48105885-48105904 | Msa0331940:intron | 50.0% | |
| CATCACCCATTCTGTCGTCT+TGG | - | chr2_4:48106299-48106318 | None:intergenic | 50.0% | |
| AGAATGGGTGATGCAAACGG+AGG | + | chr2_4:48106306-48106325 | Msa0331940:CDS | 50.0% | |
| !! | TTGAACGGTGCTGCTAATGG+TGG | + | chr2_4:48106363-48106382 | Msa0331940:CDS | 50.0% |
| CAACAGTGACGATGAGGTAG+TGG | + | chr2_4:48106389-48106408 | Msa0331940:CDS | 50.0% | |
| ! | AGTGACGATGAGGTAGTGGT+TGG | + | chr2_4:48106393-48106412 | Msa0331940:CDS | 50.0% |
| GTGATAGGCCTTTGCCTGAT+TGG | + | chr2_4:48106610-48106629 | Msa0331940:CDS | 50.0% | |
| TTTGCCTGATTGGGTGGGAT+GGG | + | chr2_4:48106620-48106639 | Msa0331940:CDS | 50.0% | |
| AATACTGAAGACGGCAACCC+AGG | + | chr2_4:48106999-48107018 | Msa0331940:CDS | 50.0% | |
| ATACTGAAGACGGCAACCCA+GGG | + | chr2_4:48107000-48107019 | Msa0331940:CDS | 50.0% | |
| TTACTGGAGGGTTGACCAAG+AGG | + | chr2_4:48107046-48107065 | Msa0331940:CDS | 50.0% | |
| ACACCGATGGACCTGATTCT+TGG | + | chr2_4:48107143-48107162 | Msa0331940:three_prime_UTR | 50.0% | |
| !! | GGACCTGATTCTTGGTTTGC+AGG | + | chr2_4:48107151-48107170 | Msa0331940:three_prime_UTR | 50.0% |
| TAAGCCCTCGTGTATTTGGC+TGG | + | chr2_4:48107380-48107399 | Msa0331940:three_prime_UTR | 50.0% | |
| AGGACCAGCCAAATACACGA+GGG | - | chr2_4:48107387-48107406 | None:intergenic | 50.0% | |
| TAGGACCAGCCAAATACACG+AGG | - | chr2_4:48107388-48107407 | None:intergenic | 50.0% | |
| GTCCTAAATGTTCGCTGGAG+CGG | + | chr2_4:48107402-48107421 | Msa0331940:three_prime_UTR | 50.0% | |
| TAAATGTTCGCTGGAGCGGA+GGG | + | chr2_4:48107406-48107425 | Msa0331940:three_prime_UTR | 50.0% | |
| GGAGAATTGAGACCTCCGCT+TGG | + | chr2_4:48102299-48102318 | Msa0331940:CDS | 55.0% | |
| TGCCCACCTTACGTAATCCG+TGG | + | chr2_4:48102385-48102404 | Msa0331940:intron | 55.0% | |
| CTGCTGGAAAACAGGCACCA+CGG | + | chr2_4:48103378-48103397 | Msa0331940:CDS | 55.0% | |
| TGCTGGAAAACAGGCACCAC+GGG | + | chr2_4:48103379-48103398 | Msa0331940:CDS | 55.0% | |
| GGCATGTCAGTACGTGGCTT+CGG | - | chr2_4:48103463-48103482 | None:intergenic | 55.0% | |
| ! | CCTGAAGGCATGTCAGTACG+TGG | - | chr2_4:48103469-48103488 | None:intergenic | 55.0% |
| ! | CCACGTACTGACATGCCTTC+AGG | + | chr2_4:48103466-48103485 | Msa0331940:CDS | 55.0% |
| ATGGCAAGCTACCGTGCTTC+AGG | + | chr2_4:48104060-48104079 | Msa0331940:CDS | 55.0% | |
| CGTGCTTCAGGACCGTAATG+TGG | + | chr2_4:48104072-48104091 | Msa0331940:CDS | 55.0% | |
| AGGCCACACCCTTACATGGT+TGG | + | chr2_4:48104268-48104287 | Msa0331940:intron | 55.0% | |
| !! | ACATGGTTGGTCTTGCGACC+CGG | + | chr2_4:48104281-48104300 | Msa0331940:intron | 55.0% |
| CCTGGTCATCACCGAGTCTT+AGG | - | chr2_4:48105192-48105211 | None:intergenic | 55.0% | |
| !! | CCTAAGACTCGGTGATGACC+AGG | + | chr2_4:48105189-48105208 | Msa0331940:CDS | 55.0% |
| AGAAACAGACTCACCTCCCC+TGG | - | chr2_4:48105210-48105229 | None:intergenic | 55.0% | |
| ! | CGATGAGGTAGTGGTTGGAG+AGG | + | chr2_4:48106398-48106417 | Msa0331940:CDS | 55.0% |
| CCATTCCCGGAATTGCTACC+TGG | - | chr2_4:48106498-48106517 | None:intergenic | 55.0% | |
| CCAGGTAGCAATTCCGGGAA+TGG | + | chr2_4:48106495-48106514 | Msa0331940:CDS | 55.0% | |
| GGTAGCAATTCCGGGAATGG+AGG | + | chr2_4:48106498-48106517 | Msa0331940:CDS | 55.0% | |
| ! | GTTCAAAGCGCCTCCATTCC+CGG | - | chr2_4:48106511-48106530 | None:intergenic | 55.0% |
| TAGGCCTTTGCCTGATTGGG+TGG | + | chr2_4:48106614-48106633 | Msa0331940:CDS | 55.0% | |
| AGGCCTTTGCCTGATTGGGT+GGG | + | chr2_4:48106615-48106634 | Msa0331940:CDS | 55.0% | |
| CATCCCACCCAATCAGGCAA+AGG | - | chr2_4:48106621-48106640 | None:intergenic | 55.0% | |
| CTTTGCCTGATTGGGTGGGA+TGG | + | chr2_4:48106619-48106638 | Msa0331940:CDS | 55.0% | |
| TTGCCTGATTGGGTGGGATG+GGG | + | chr2_4:48106621-48106640 | Msa0331940:CDS | 55.0% | |
| GTCCCCTAAAGCGGCAGAAA+AGG | + | chr2_4:48106974-48106993 | Msa0331940:CDS | 55.0% | |
| TGACCAAGAGGTTGCTGCTC+TGG | + | chr2_4:48107058-48107077 | Msa0331940:CDS | 55.0% | |
| ACTCCAGAGCAGCAACCTCT+TGG | - | chr2_4:48107064-48107083 | None:intergenic | 55.0% | |
| GCCCCTGCAAACCAAGAATC+AGG | - | chr2_4:48107157-48107176 | None:intergenic | 55.0% | |
| ! | GGCTGGTCCTAAATGTTCGC+TGG | + | chr2_4:48107397-48107416 | Msa0331940:three_prime_UTR | 55.0% |
| CTCCGCTCCAGCGAACATTT+AGG | - | chr2_4:48107407-48107426 | None:intergenic | 55.0% | |
| CTAAATGTTCGCTGGAGCGG+AGG | + | chr2_4:48107405-48107424 | Msa0331940:three_prime_UTR | 55.0% | |
| CAGCCAACTGTACCTGCTGC+TGG | + | chr2_4:48103362-48103381 | Msa0331940:intron | 60.0% | |
| ! | GGTGCCTGTTTTCCAGCAGC+AGG | - | chr2_4:48103377-48103396 | None:intergenic | 60.0% |
| TGGAAAACAGGCACCACGGG+CGG | + | chr2_4:48103382-48103401 | Msa0331940:CDS | 60.0% | |
| GAGCTTACCCACACGCCCAA+CGG | - | chr2_4:48104111-48104130 | None:intergenic | 60.0% | |
| GGCTAGGCCACACCCTTACA+TGG | + | chr2_4:48104264-48104283 | Msa0331940:intron | 60.0% | |
| TCGGGCGTCTGCACAGGAAA+AGG | - | chr2_4:48104616-48104635 | None:intergenic | 60.0% | |
| TCACCCCATCCCACCCAATC+AGG | - | chr2_4:48106627-48106646 | None:intergenic | 60.0% | |
| GAGGGAATAGTCGGGGAAGC+AGG | + | chr2_4:48106933-48106952 | Msa0331940:CDS | 60.0% | |
| AGACGGCAACCCAGGGATGA+AGG | + | chr2_4:48107007-48107026 | Msa0331940:CDS | 60.0% | |
| GGAAAACAGGCACCACGGGC+GGG | + | chr2_4:48103383-48103402 | Msa0331940:CDS | 65.0% | |
| GCACCACGGGCGGGAAACAT+TGG | + | chr2_4:48103392-48103411 | Msa0331940:CDS | 65.0% | |
| TGGCCAATGTTTCCCGCCCG+TGG | - | chr2_4:48103398-48103417 | None:intergenic | 65.0% | |
| AAGCAGTCGGGCGTCTGCAC+AGG | - | chr2_4:48104622-48104641 | None:intergenic | 65.0% | |
| !! | GACTCGGTGATGACCAGGGG+AGG | + | chr2_4:48105194-48105213 | Msa0331940:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 48101160 | 48107525 | 48101160 | ID=Msa0331940;Name=Msa0331940 |
| chr2_4 | mRNA | 48101160 | 48107525 | 48101160 | ID=Msa0331940-mRNA-1;Parent=Msa0331940;Name=Msa0331940-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.90|0.91|1|1|1|12|440|712 |
| chr2_4 | exon | 48101160 | 48101267 | 48101160 | ID=Msa0331940-mRNA-1:exon:14499;Parent=Msa0331940-mRNA-1 |
| chr2_4 | exon | 48101685 | 48101779 | 48101685 | ID=Msa0331940-mRNA-1:exon:14500;Parent=Msa0331940-mRNA-1 |
| chr2_4 | exon | 48101859 | 48102067 | 48101859 | ID=Msa0331940-mRNA-1:exon:14501;Parent=Msa0331940-mRNA-1 |
| chr2_4 | exon | 48102153 | 48102337 | 48102153 | ID=Msa0331940-mRNA-1:exon:14502;Parent=Msa0331940-mRNA-1 |
| chr2_4 | exon | 48102725 | 48102828 | 48102725 | ID=Msa0331940-mRNA-1:exon:14503;Parent=Msa0331940-mRNA-1 |
| chr2_4 | exon | 48102974 | 48103139 | 48102974 | ID=Msa0331940-mRNA-1:exon:14504;Parent=Msa0331940-mRNA-1 |
| chr2_4 | exon | 48103365 | 48103487 | 48103365 | ID=Msa0331940-mRNA-1:exon:14505;Parent=Msa0331940-mRNA-1 |
| chr2_4 | exon | 48104040 | 48104122 | 48104040 | ID=Msa0331940-mRNA-1:exon:14506;Parent=Msa0331940-mRNA-1 |
| chr2_4 | exon | 48104628 | 48104769 | 48104628 | ID=Msa0331940-mRNA-1:exon:14507;Parent=Msa0331940-mRNA-1 |
| chr2_4 | exon | 48104937 | 48104966 | 48104937 | ID=Msa0331940-mRNA-1:exon:14508;Parent=Msa0331940-mRNA-1 |
| chr2_4 | exon | 48105145 | 48105215 | 48105145 | ID=Msa0331940-mRNA-1:exon:14509;Parent=Msa0331940-mRNA-1 |
| chr2_4 | exon | 48106263 | 48107525 | 48106263 | ID=Msa0331940-mRNA-1:exon:14510;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48101160 | 48101267 | 48101160 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48101685 | 48101779 | 48101685 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48101859 | 48102067 | 48101859 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48102153 | 48102337 | 48102153 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48102725 | 48102828 | 48102725 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48102974 | 48103139 | 48102974 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48103365 | 48103487 | 48103365 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48104040 | 48104122 | 48104040 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48104628 | 48104769 | 48104628 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48104937 | 48104966 | 48104937 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48105145 | 48105215 | 48105145 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | CDS | 48106263 | 48107085 | 48106263 | ID=Msa0331940-mRNA-1:cds;Parent=Msa0331940-mRNA-1 |
| chr2_4 | three_prime_UTR | 48107086 | 48107525 | 48107086 | ID=Msa0331940-mRNA-1:three_prime_utr;Parent=Msa0331940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
