Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333510 | XP_013464684.1 | 93.846 | 325 | 20 | 0 | 1 | 325 | 1 | 325 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037780 | Msa0333510 | 0.814241 | 1.702697e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333510 | MtrunA17_Chr2g0317251 | 93.846 | 325 | 20 | 0 | 1 | 325 | 1 | 325 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333510 | AT5G53860.2 | 65.951 | 326 | 109 | 2 | 1 | 325 | 1 | 325 | 2.90e-161 | 457 |
| Msa0333510 | AT5G53860.4 | 58.678 | 363 | 111 | 2 | 1 | 325 | 1 | 362 | 7.23e-153 | 437 |
| Msa0333510 | AT5G53860.3 | 65.079 | 315 | 108 | 2 | 1 | 314 | 1 | 314 | 4.11e-152 | 430 |
| Msa0333510 | AT5G53860.1 | 61.963 | 326 | 102 | 3 | 1 | 325 | 1 | 305 | 5.00e-146 | 417 |
| Msa0333510 | AT5G53860.5 | 57.225 | 346 | 126 | 4 | 1 | 325 | 1 | 345 | 5.23e-139 | 401 |
Find 102 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCCGATATTGCTGAATTT+TGG | 0.193778 | 2_4:+51310977 | Msa0333510:CDS |
| CTCCACCAAGACCATCAAAT+TGG | 0.246915 | 2_4:+51312491 | Msa0333510:CDS |
| CAACCAAAATTCAGCAATAT+CGG | 0.250137 | 2_4:-51310980 | None:intergenic |
| CCATCTGCTGAAATCTTAAA+TGG | 0.256318 | 2_4:-51310115 | None:intergenic |
| TTGTAGGCGGTTGCTACTTT+GGG | 0.269453 | 2_4:+51309073 | Msa0333510:intron |
| ACTCTTGCATTTGATATTGC+TGG | 0.301227 | 2_4:+51308136 | Msa0333510:CDS |
| CATACCGTTCCATCGCAAAT+TGG | 0.353463 | 2_4:-51309960 | None:intergenic |
| AAGGAATTCAACAATGCTTA+TGG | 0.353559 | 2_4:+51308058 | Msa0333510:CDS |
| GCATATACCATCATCCTCTT+TGG | 0.355988 | 2_4:+51309905 | Msa0333510:CDS |
| CCTAAACGACCTCGCGGTTT+CGG | 0.373026 | 2_4:+51308001 | Msa0333510:CDS |
| ATTGTAGGCGGTTGCTACTT+TGG | 0.373157 | 2_4:+51309072 | Msa0333510:intron |
| GATATTGCACAGGGTGTAAT+GGG | 0.374956 | 2_4:+51310067 | Msa0333510:intron |
| GCCTTCTTAGCCTTGTAGTA+AGG | 0.375119 | 2_4:-51312439 | None:intergenic |
| GACAATATTGTCAGATTATG+AGG | 0.383127 | 2_4:+51311056 | Msa0333510:CDS |
| GGTTCTGCTCCTCGTGGCTT+TGG | 0.391130 | 2_4:+51308157 | Msa0333510:CDS |
| TCCACCAAGACCATCAAATT+GGG | 0.392965 | 2_4:+51312492 | Msa0333510:CDS |
| CGATATTGCACAGGGTGTAA+TGG | 0.398676 | 2_4:+51310066 | Msa0333510:intron |
| TGGCTTTGGTGTTCCTGAGC+TGG | 0.400797 | 2_4:+51308171 | Msa0333510:CDS |
| CAGATGCCATTGTCAACAAC+CGG | 0.403168 | 2_4:+51309871 | Msa0333510:CDS |
| AAATGACGACTGACCTCATA+TGG | 0.403883 | 2_4:-51310332 | None:intergenic |
| ACCTATCCACAGATTATGTA+TGG | 0.408343 | 2_4:+51311006 | Msa0333510:CDS |
| GGCAATTCTTCACTTGATAG+TGG | 0.410251 | 2_4:-51309352 | None:intergenic |
| ATACATACACCCCAATTTGA+TGG | 0.414935 | 2_4:-51312502 | None:intergenic |
| TCGTTTAGGCATGGCGTGGC+GGG | 0.438295 | 2_4:-51307987 | None:intergenic |
| GACCTGGCCACGAGAAAACC+TGG | 0.439044 | 2_4:+51312027 | Msa0333510:CDS |
| TATGACATTGCATTAAACTT+AGG | 0.449811 | 2_4:+51309100 | Msa0333510:CDS |
| GGATCATCCTTTGCACGGTC+AGG | 0.455204 | 2_4:-51312397 | None:intergenic |
| CCCCAATTTGATGGTCTTGG+TGG | 0.463299 | 2_4:-51312493 | None:intergenic |
| CCCTTACTACAAGGCTAAGA+AGG | 0.463570 | 2_4:+51312438 | Msa0333510:CDS |
| GCGTGTGGGTTTAGGAATCC+AGG | 0.463611 | 2_4:+51311986 | Msa0333510:intron |
| CCGAAACCGCGAGGTCGTTT+AGG | 0.466274 | 2_4:-51308001 | None:intergenic |
| CAATTTGATGGTCTTGGTGG+AGG | 0.466962 | 2_4:-51312490 | None:intergenic |
| ATCTCGAAGTTGGTCCCACC+TGG | 0.469525 | 2_4:-51312004 | None:intergenic |
| GACATTACGAGCTTGCCAAT+GGG | 0.474351 | 2_4:-51310291 | None:intergenic |
| AACCAAAATTCAGCAATATC+GGG | 0.480296 | 2_4:-51310979 | None:intergenic |
| AGAGAAGATAGAGTTGAAAG+AGG | 0.483806 | 2_4:-51307932 | None:intergenic |
| CCTTCTTAGCCTTGTAGTAA+GGG | 0.484303 | 2_4:-51312438 | None:intergenic |
| ACACCCCAATTTGATGGTCT+TGG | 0.486633 | 2_4:-51312496 | None:intergenic |
| AAAGATGGATTATCCATATG+AGG | 0.500991 | 2_4:+51310319 | Msa0333510:CDS |
| TGTAGGCGGTTGCTACTTTG+GGG | 0.503583 | 2_4:+51309074 | Msa0333510:intron |
| GATAGAGTTGAAAGAGGGAA+AGG | 0.504172 | 2_4:-51307926 | None:intergenic |
| GAGAAGATAGAGTTGAAAGA+GGG | 0.505182 | 2_4:-51307931 | None:intergenic |
| GAGTGAAGAGAACTTTGAAA+GGG | 0.506465 | 2_4:-51308108 | None:intergenic |
| TGTACCATGTGTCGAGGAAG+TGG | 0.506981 | 2_4:+51309323 | Msa0333510:CDS |
| TTTATGAAATGACGAGGTAG+TGG | 0.507518 | 2_4:+51307890 | None:intergenic |
| TTGGCAAGCTCGTAATGTCT+TGG | 0.508846 | 2_4:+51310295 | Msa0333510:CDS |
| TGCATTAAACTTAGGAAGGA+AGG | 0.514974 | 2_4:+51309108 | Msa0333510:CDS |
| TAAGAAGGCACTGGAGAAAG+AGG | 0.516270 | 2_4:+51312453 | Msa0333510:CDS |
| TCGTAATGTCTTGGAAAAGA+TGG | 0.522844 | 2_4:+51310304 | Msa0333510:CDS |
| GGAGTGAAGAGAACTTTGAA+AGG | 0.527425 | 2_4:-51308109 | None:intergenic |
| CTTCTTTGCATTGTCGCCGT+AGG | 0.529584 | 2_4:-51311034 | None:intergenic |
| TTAAGATTATGGAGCCCCAT+TGG | 0.533982 | 2_4:+51310276 | Msa0333510:intron |
| TGAAGAATTGCCACTTGAAG+AGG | 0.534970 | 2_4:+51309363 | Msa0333510:CDS |
| CCATTTAAGATTTCAGCAGA+TGG | 0.536536 | 2_4:+51310115 | Msa0333510:CDS |
| CTACAAGGCTAAGAAGGCAC+TGG | 0.545598 | 2_4:+51312444 | Msa0333510:CDS |
| GTCGTTTAGGCATGGCGTGG+CGG | 0.550911 | 2_4:-51307988 | None:intergenic |
| AGACATTACGAGCTTGCCAA+TGG | 0.557112 | 2_4:-51310292 | None:intergenic |
| TGGCCAGGTCATCTCGAAGT+TGG | 0.558388 | 2_4:-51312014 | None:intergenic |
| ATATCAAATGCAAGAGTCAA+AGG | 0.560677 | 2_4:-51308130 | None:intergenic |
| TGAGAGTGAATGAAAGTGAG+TGG | 0.563830 | 2_4:-51307957 | None:intergenic |
| TTTAGGCATGGCGTGGCGGG+AGG | 0.573014 | 2_4:-51307984 | None:intergenic |
| GAGAGCTTAGAAACCAGCTC+AGG | 0.573108 | 2_4:-51308184 | None:intergenic |
| TTTGATGGTAATGGTATCTG+AGG | 0.573297 | 2_4:-51309930 | None:intergenic |
| CTCAGCCCGGTTGTTGACAA+TGG | 0.574412 | 2_4:-51309877 | None:intergenic |
| CTGTCCAATTTGCGATGGAA+CGG | 0.577259 | 2_4:+51309956 | Msa0333510:CDS |
| ATTATGTATGGATTTACCTA+CGG | 0.578278 | 2_4:+51311018 | Msa0333510:CDS |
| TGCGACATGTAGTGGATGGC+AGG | 0.586237 | 2_4:+51309292 | Msa0333510:CDS |
| ACCGCGAGGTCGTTTAGGCA+TGG | 0.588322 | 2_4:-51307996 | None:intergenic |
| ACATTGCATTAAACTTAGGA+AGG | 0.589476 | 2_4:+51309104 | Msa0333510:CDS |
| TCCATACATAATCTGTGGAT+AGG | 0.590215 | 2_4:-51311007 | None:intergenic |
| TGAGGATCCAAAGAGGATGA+TGG | 0.592909 | 2_4:-51309912 | None:intergenic |
| AGGGACTGTGCGACATGTAG+TGG | 0.596167 | 2_4:+51309284 | Msa0333510:intron |
| AAAGACTGTCCAATTTGCGA+TGG | 0.596544 | 2_4:+51309951 | Msa0333510:CDS |
| GGCCACGAGAAAACCTGGGT+GGG | 0.601076 | 2_4:+51312032 | Msa0333510:CDS |
| TGTTCCACTTCCTCGACACA+TGG | 0.602643 | 2_4:-51309327 | None:intergenic |
| GAAGGAAGGTGATATGTCAA+AGG | 0.603671 | 2_4:+51309122 | Msa0333510:CDS |
| TCGACACATGGTACACCGCA+TGG | 0.606087 | 2_4:-51309315 | None:intergenic |
| GTAAATCCATACATAATCTG+TGG | 0.613426 | 2_4:-51311012 | None:intergenic |
| ATACTTCAGAGATCGCTACA+AGG | 0.615855 | 2_4:+51308039 | Msa0333510:CDS |
| GGACCAACTTCGAGATGACC+TGG | 0.616878 | 2_4:+51312011 | Msa0333510:CDS |
| TATAGATCCTGACCGTGCAA+AGG | 0.632744 | 2_4:+51312390 | Msa0333510:CDS |
| GTATATGCACTAACTCAGCC+CGG | 0.638670 | 2_4:-51309890 | None:intergenic |
| ACCTGGCCACGAGAAAACCT+GGG | 0.643388 | 2_4:+51312028 | Msa0333510:CDS |
| AGATGCCATTGTCAACAACC+GGG | 0.647944 | 2_4:+51309872 | Msa0333510:CDS |
| CCACCAAGACCATCAAATTG+GGG | 0.650516 | 2_4:+51312493 | Msa0333510:CDS |
| ATGCGGTGTACCATGTGTCG+AGG | 0.655183 | 2_4:+51309317 | Msa0333510:CDS |
| TGACAGGATCATCCTTTGCA+CGG | 0.658143 | 2_4:-51312402 | None:intergenic |
| AGAGTACTCACCTCTTCAAG+TGG | 0.663437 | 2_4:-51309373 | None:intergenic |
| ACATTACGAGCTTGCCAATG+GGG | 0.667348 | 2_4:-51310290 | None:intergenic |
| AATTGATTTATGAAATGACG+AGG | 0.667525 | 2_4:+51307884 | None:intergenic |
| ACGAAATTGCCGAAACCGCG+AGG | 0.672302 | 2_4:-51308010 | None:intergenic |
| ATTGCTGGTTCTGCTCCTCG+TGG | 0.674679 | 2_4:+51308151 | Msa0333510:CDS |
| GAGGTCGTTTAGGCATGGCG+TGG | 0.680269 | 2_4:-51307991 | None:intergenic |
| TGTGGGTTTAGGAATCCAGG+TGG | 0.693474 | 2_4:+51311989 | Msa0333510:intron |
| GTGGGTTTAGGAATCCAGGT+GGG | 0.697770 | 2_4:+51311990 | Msa0333510:intron |
| TCATGCAGAAACTCCCACCC+AGG | 0.699249 | 2_4:-51312045 | None:intergenic |
| TGGTATCTGAGGATCCAAAG+AGG | 0.699470 | 2_4:-51309919 | None:intergenic |
| TGGCCACGAGAAAACCTGGG+TGG | 0.701513 | 2_4:+51312031 | Msa0333510:CDS |
| GCCATGCCTAAACGACCTCG+CGG | 0.734651 | 2_4:+51307995 | Msa0333510:exon |
| ACTGTGCGACATGTAGTGGA+TGG | 0.736416 | 2_4:+51309288 | Msa0333510:CDS |
| GTAGTGGATGGCAGGCCATG+CGG | 0.739709 | 2_4:+51309300 | Msa0333510:CDS |
| TCAGGAACACCAAAGCCACG+AGG | 0.752787 | 2_4:-51308166 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTATCATAATTTCAT+AGG | + | chr2_4:51309756-51309775 | Msa0333510:intron | 10.0% |
| !! | TTTAGAAAGAAAAAAAAAAT+CGG | - | chr2_4:51310169-51310188 | None:intergenic | 10.0% |
| !!! | TTAAGTTTTAAGAATAAATA+GGG | + | chr2_4:51310594-51310613 | Msa0333510:intron | 10.0% |
| !!! | TTAATTTTTTTTTGAAGAAA+AGG | + | chr2_4:51311759-51311778 | Msa0333510:intron | 10.0% |
| !! | AAAAAAAAAAAAATGCTACA+AGG | - | chr2_4:51309741-51309760 | None:intergenic | 15.0% |
| !!! | GTTAAGTTTTAAGAATAAAT+AGG | + | chr2_4:51310593-51310612 | Msa0333510:intron | 15.0% |
| !!! | TAAGTTTTAAGAATAAATAG+GGG | + | chr2_4:51310595-51310614 | Msa0333510:intron | 15.0% |
| !! | AATATTATTCTGTAATCAAA+AGG | + | chr2_4:51310706-51310725 | Msa0333510:intron | 15.0% |
| !! | ATATTATTCTGTAATCAAAA+GGG | + | chr2_4:51310707-51310726 | Msa0333510:intron | 15.0% |
| !! | TGATATAGAAGAATAAAATA+GGG | - | chr2_4:51310738-51310757 | None:intergenic | 15.0% |
| !!! | TTTAAAGCTAAAATCCAAAA+GGG | - | chr2_4:51308240-51308259 | None:intergenic | 20.0% |
| !!! | TTTTAAAGCTAAAATCCAAA+AGG | - | chr2_4:51308241-51308260 | None:intergenic | 20.0% |
| !!! | TGTCAATTTTGTGTTTTTTT+AGG | + | chr2_4:51308313-51308332 | Msa0333510:intron | 20.0% |
| !!! | ATTGATTATTTCTTAGTTTC+TGG | + | chr2_4:51308412-51308431 | Msa0333510:intron | 20.0% |
| !!! | TTGATTATTTCTTAGTTTCT+GGG | + | chr2_4:51308413-51308432 | Msa0333510:intron | 20.0% |
| !! | CATTTCTTTCAAACTATTAT+CGG | - | chr2_4:51308550-51308569 | None:intergenic | 20.0% |
| !!! | AATTTACTCAATACATTTTG+TGG | - | chr2_4:51308894-51308913 | None:intergenic | 20.0% |
| !! | TTAGATTTCAATAATTCCAA+AGG | - | chr2_4:51309244-51309263 | None:intergenic | 20.0% |
| !! | AAATAAACCATAAACTACAT+TGG | - | chr2_4:51309408-51309427 | None:intergenic | 20.0% |
| !! | ACATCTGATTTATAACAATT+TGG | + | chr2_4:51309659-51309678 | Msa0333510:intron | 20.0% |
| !! | CATCTGATTTATAACAATTT+GGG | + | chr2_4:51309660-51309679 | Msa0333510:intron | 20.0% |
| !!! | TAAGGTATTTATACATTAGT+TGG | - | chr2_4:51309792-51309811 | None:intergenic | 20.0% |
| !! | AAATTGAAGAAGCAAATATA+AGG | - | chr2_4:51309810-51309829 | None:intergenic | 20.0% |
| !! | CATAATCTTAAACAAAGAAA+GGG | - | chr2_4:51310267-51310286 | None:intergenic | 20.0% |
| !! | CAAATGAAACTATAAATGTA+TGG | - | chr2_4:51310454-51310473 | None:intergenic | 20.0% |
| !! | ATAATTAATTAAGTCAGTAG+TGG | + | chr2_4:51310567-51310586 | Msa0333510:intron | 20.0% |
| !! | TAATTAATTAAGTCAGTAGT+GGG | + | chr2_4:51310568-51310587 | Msa0333510:intron | 20.0% |
| !! | CTGATATAGAAGAATAAAAT+AGG | - | chr2_4:51310739-51310758 | None:intergenic | 20.0% |
| !!! | TTTAATATTTTCAGCACATA+AGG | + | chr2_4:51310941-51310960 | Msa0333510:intron | 20.0% |
| !!! | TTAATATTTTCAGCACATAA+GGG | + | chr2_4:51310942-51310961 | Msa0333510:intron | 20.0% |
| !! | TGAAAACATCTTAAAAAATG+AGG | + | chr2_4:51311389-51311408 | Msa0333510:intron | 20.0% |
| !! | TTTGCAATAAAGAATAGTTA+TGG | - | chr2_4:51311586-51311605 | None:intergenic | 20.0% |
| !! | TGTAAGAAGAAATGTTTATA+CGG | + | chr2_4:51311669-51311688 | Msa0333510:intron | 20.0% |
| !! | TTTATAAGTTACATAATCAG+AGG | - | chr2_4:51311801-51311820 | None:intergenic | 20.0% |
| !! | AGAAATACGAAGATTATTTA+TGG | - | chr2_4:51311963-51311982 | None:intergenic | 20.0% |
| !!! | ATATTTAGCTAGTTGATAAA+TGG | + | chr2_4:51312172-51312191 | Msa0333510:intron | 20.0% |
| !!! | TACAATTTTGTTGAAAATCA+AGG | + | chr2_4:51312211-51312230 | Msa0333510:intron | 20.0% |
| !!! | AAGGTGATTTTTTAAATAGT+TGG | + | chr2_4:51312230-51312249 | Msa0333510:intron | 20.0% |
| !! | ATATATAAATTTGTGCAAGA+GGG | - | chr2_4:51312321-51312340 | None:intergenic | 20.0% |
| !! | AATATATAAATTTGTGCAAG+AGG | - | chr2_4:51312322-51312341 | None:intergenic | 20.0% |
| !! | TTTTTGTGTTTTGCTTATCT+GGG | + | chr2_4:51308269-51308288 | Msa0333510:intron | 25.0% |
| ! | AATTGACAAATAGAACTAGT+TGG | - | chr2_4:51308301-51308320 | None:intergenic | 25.0% |
| !! | TTTTGTTGAGGTTATGTTTT+TGG | + | chr2_4:51308348-51308367 | Msa0333510:intron | 25.0% |
| !! | TTTGTTGAGGTTATGTTTTT+GGG | + | chr2_4:51308349-51308368 | Msa0333510:intron | 25.0% |
| !! | TGCTTTGTTGAAAATTGAAA+TGG | + | chr2_4:51308465-51308484 | Msa0333510:intron | 25.0% |
| ! | TTGTTGAAAATTGAAATGGA+TGG | + | chr2_4:51308469-51308488 | Msa0333510:intron | 25.0% |
| !!! | CAATTTGAATTTTGAAGTGT+CGG | + | chr2_4:51308623-51308642 | Msa0333510:intron | 25.0% |
| ! | TACATAGGTAATTTCATCAA+GGG | + | chr2_4:51308649-51308668 | Msa0333510:intron | 25.0% |
| ! | AGAAATTGATTACACAACTT+TGG | + | chr2_4:51308764-51308783 | Msa0333510:intron | 25.0% |
| ! | TGAGTTCATCAATTTATCAA+TGG | + | chr2_4:51308865-51308884 | Msa0333510:intron | 25.0% |
| ! | TATGACATTGCATTAAACTT+AGG | + | chr2_4:51309100-51309119 | Msa0333510:CDS | 25.0% |
| ! | TAAATGTGTTATCAAGAACA+GGG | + | chr2_4:51309265-51309284 | Msa0333510:intron | 25.0% |
| ! | ATAAACTACATTGGAATACA+TGG | - | chr2_4:51309399-51309418 | None:intergenic | 25.0% |
| ! | ATGTATTCCAATGTAGTTTA+TGG | + | chr2_4:51309398-51309417 | Msa0333510:intron | 25.0% |
| !!! | TTATCTTTTGGGTTCATTTT+TGG | + | chr2_4:51309533-51309552 | Msa0333510:intron | 25.0% |
| ! | AAAATGGAGGTAGTTATTTA+CGG | - | chr2_4:51309714-51309733 | None:intergenic | 25.0% |
| !!! | TTCAATTTATCCACTTTTAG+TGG | + | chr2_4:51309822-51309841 | Msa0333510:intron | 25.0% |
| !! | AGAAAAAAAAAATCGGTTCA+AGG | - | chr2_4:51310162-51310181 | None:intergenic | 25.0% |
| ! | CCATAATCTTAAACAAAGAA+AGG | - | chr2_4:51310268-51310287 | None:intergenic | 25.0% |
| !! | CCTTTCTTTGTTTAAGATTA+TGG | + | chr2_4:51310265-51310284 | Msa0333510:intron | 25.0% |
| !!! | ATTTTGACGATAATAGCAAT+TGG | - | chr2_4:51310384-51310403 | None:intergenic | 25.0% |
| ! | AGTAGTTAATTATGCAGTTA+TGG | + | chr2_4:51310523-51310542 | Msa0333510:intron | 25.0% |
| ! | ATTATGTATGGATTTACCTA+CGG | + | chr2_4:51311018-51311037 | Msa0333510:CDS | 25.0% |
| ! | ACTGAAACTGAAAAATAAGA+AGG | - | chr2_4:51311097-51311116 | None:intergenic | 25.0% |
| ! | AATAATTTGAATGAGCAAAG+AGG | - | chr2_4:51311188-51311207 | None:intergenic | 25.0% |
| !! | CTCATTCAAATTATTCCTTT+TGG | + | chr2_4:51311193-51311212 | Msa0333510:intron | 25.0% |
| ! | ACATCAAAGAACAAAACTAA+TGG | + | chr2_4:51311287-51311306 | Msa0333510:intron | 25.0% |
| ! | TTGTCAGTTAGATAAATTAC+TGG | - | chr2_4:51311496-51311515 | None:intergenic | 25.0% |
| !! | TTATGGAGTTATTTCCTTAT+TGG | - | chr2_4:51311569-51311588 | None:intergenic | 25.0% |
| ! | GTAAGAAGAAATGTTTATAC+GGG | + | chr2_4:51311670-51311689 | Msa0333510:intron | 25.0% |
| ! | CCAATATAAAATCCATTCAA+GGG | - | chr2_4:51311705-51311724 | None:intergenic | 25.0% |
| ! | ACCAATATAAAATCCATTCA+AGG | - | chr2_4:51311706-51311725 | None:intergenic | 25.0% |
| !!! | TTGAATGGATTTTATATTGG+TGG | + | chr2_4:51311705-51311724 | Msa0333510:intron | 25.0% |
| !!! | TGAATGGATTTTATATTGGT+GGG | + | chr2_4:51311706-51311725 | Msa0333510:intron | 25.0% |
| !!! | CTTTAGAGCATAAATGTTAT+AGG | - | chr2_4:51311897-51311916 | None:intergenic | 25.0% |
| ! | AATACGAAGATTATTTATGG+AGG | - | chr2_4:51311960-51311979 | None:intergenic | 25.0% |
| !! | AATATTGTTGCTTGTATTCA+TGG | + | chr2_4:51312093-51312112 | Msa0333510:intron | 25.0% |
| ! | TATAATTGTACTGTTATCAC+AGG | + | chr2_4:51312357-51312376 | Msa0333510:intron | 25.0% |
| AAGGAATTCAACAATGCTTA+TGG | + | chr2_4:51308058-51308077 | Msa0333510:CDS | 30.0% | |
| ATATCAAATGCAAGAGTCAA+AGG | - | chr2_4:51308133-51308152 | None:intergenic | 30.0% | |
| ! | CTTTTTGTGTTTTGCTTATC+TGG | + | chr2_4:51308268-51308287 | Msa0333510:intron | 30.0% |
| !!! | TGAATTGTCTTGTTTTGTTG+AGG | + | chr2_4:51308336-51308355 | Msa0333510:intron | 30.0% |
| TGTTTGTATCTGATACATGT+CGG | - | chr2_4:51308597-51308616 | None:intergenic | 30.0% | |
| CTACATAGGTAATTTCATCA+AGG | + | chr2_4:51308648-51308667 | Msa0333510:intron | 30.0% | |
| ATTGATGAACTCAAAGTGAT+GGG | - | chr2_4:51308818-51308837 | None:intergenic | 30.0% | |
| AATTGATGAACTCAAAGTGA+TGG | - | chr2_4:51308819-51308838 | None:intergenic | 30.0% | |
| ! | GTTCTTCTTTTGATATTTGC+AGG | + | chr2_4:51308963-51308982 | Msa0333510:intron | 30.0% |
| ACAAAACAAAGAACTAACCA+TGG | - | chr2_4:51309012-51309031 | None:intergenic | 30.0% | |
| ! | TGATAATGAATATTGCTGCA+TGG | + | chr2_4:51309045-51309064 | Msa0333510:intron | 30.0% |
| ACATTGCATTAAACTTAGGA+AGG | + | chr2_4:51309104-51309123 | Msa0333510:CDS | 30.0% | |
| GACACAATATGTATAATCTC+TGG | + | chr2_4:51309197-51309216 | Msa0333510:intron | 30.0% | |
| CTAAATGTGTTATCAAGAAC+AGG | + | chr2_4:51309264-51309283 | Msa0333510:intron | 30.0% | |
| ! | ACTCTGCAATCTTTATCTTT+TGG | + | chr2_4:51309521-51309540 | Msa0333510:intron | 30.0% |
| ! | CTCTGCAATCTTTATCTTTT+GGG | + | chr2_4:51309522-51309541 | Msa0333510:intron | 30.0% |
| !! | ATACATGTCTAGTTTGTTCA+AGG | + | chr2_4:51309556-51309575 | Msa0333510:intron | 30.0% |
| AATGCTACAAGGAATCAAAA+TGG | - | chr2_4:51309730-51309749 | None:intergenic | 30.0% | |
| !! | AGAATTTTTCGATATTGCAC+AGG | + | chr2_4:51310057-51310076 | Msa0333510:intron | 30.0% |
| !! | GAATTTTTCGATATTGCACA+GGG | + | chr2_4:51310058-51310077 | Msa0333510:intron | 30.0% |
| !!! | GGTAATTTGTTTTTGCATTC+AGG | - | chr2_4:51310097-51310116 | None:intergenic | 30.0% |
| !! | AAAGATGGATTATCCATATG+AGG | + | chr2_4:51310319-51310338 | Msa0333510:CDS | 30.0% |
| ACTATAAATGTATGGCATCA+AGG | - | chr2_4:51310446-51310465 | None:intergenic | 30.0% | |
| ATAATATTGCAGAACTTCGA+GGG | - | chr2_4:51310694-51310713 | None:intergenic | 30.0% | |
| AATAATATTGCAGAACTTCG+AGG | - | chr2_4:51310695-51310714 | None:intergenic | 30.0% | |
| CAAACTACTATTAGTTAAGC+AGG | + | chr2_4:51310831-51310850 | Msa0333510:intron | 30.0% | |
| AACCAAAATTCAGCAATATC+GGG | - | chr2_4:51310982-51311001 | None:intergenic | 30.0% | |
| CAACCAAAATTCAGCAATAT+CGG | - | chr2_4:51310983-51311002 | None:intergenic | 30.0% | |
| GTAAATCCATACATAATCTG+TGG | - | chr2_4:51311015-51311034 | None:intergenic | 30.0% | |
| GACAATATTGTCAGATTATG+AGG | + | chr2_4:51311056-51311075 | Msa0333510:CDS | 30.0% | |
| !! | TATTGATTTGTCCCCTTATT+GGG | + | chr2_4:51311130-51311149 | Msa0333510:intron | 30.0% |
| AAGCATATCAAACCCAATAA+GGG | - | chr2_4:51311145-51311164 | None:intergenic | 30.0% | |
| AAAGCATATCAAACCCAATA+AGG | - | chr2_4:51311146-51311165 | None:intergenic | 30.0% | |
| !! | ATAAATCCTTTGAAGTCAGT+AGG | - | chr2_4:51311319-51311338 | None:intergenic | 30.0% |
| TGCTTAACACAACAATAACA+CGG | + | chr2_4:51311338-51311357 | Msa0333510:intron | 30.0% | |
| ! | ATTGCAAAGGAAGATTGTTT+TGG | - | chr2_4:51311437-51311456 | None:intergenic | 30.0% |
| GTTAGATAAATTACTGGAAG+TGG | - | chr2_4:51311490-51311509 | None:intergenic | 30.0% | |
| AAGACGTTCTTTGAACAAAA+TGG | + | chr2_4:51311530-51311549 | Msa0333510:intron | 30.0% | |
| !!! | TCCATTCATTTTTTGCACAA+TGG | + | chr2_4:51311616-51311635 | Msa0333510:intron | 30.0% |
| ACCATTGTGCAAAAAATGAA+TGG | - | chr2_4:51311620-51311639 | None:intergenic | 30.0% | |
| !! | CCCTTGAATGGATTTTATAT+TGG | + | chr2_4:51311702-51311721 | Msa0333510:intron | 30.0% |
| !! | GAATGGATTTTATATTGGTG+GGG | + | chr2_4:51311707-51311726 | Msa0333510:intron | 30.0% |
| !!! | TTTTTTGAAGAAAAGGCAGA+AGG | + | chr2_4:51311766-51311785 | Msa0333510:intron | 30.0% |
| ACTTGAAAAAGCTACTGTAT+GGG | - | chr2_4:51311841-51311860 | None:intergenic | 30.0% | |
| AACTTGAAAAAGCTACTGTA+TGG | - | chr2_4:51311842-51311861 | None:intergenic | 30.0% | |
| GTTATAGGTAATGTGTAGTT+AGG | - | chr2_4:51311882-51311901 | None:intergenic | 30.0% | |
| TAAAAACATCCCTTACTACA+AGG | + | chr2_4:51312429-51312448 | Msa0333510:CDS | 30.0% | |
| GAGAAGATAGAGTTGAAAGA+GGG | - | chr2_4:51307934-51307953 | None:intergenic | 35.0% | |
| AGAGAAGATAGAGTTGAAAG+AGG | - | chr2_4:51307935-51307954 | None:intergenic | 35.0% | |
| ! | GAGTGAAGAGAACTTTGAAA+GGG | - | chr2_4:51308111-51308130 | None:intergenic | 35.0% |
| ACTCTTGCATTTGATATTGC+TGG | + | chr2_4:51308136-51308155 | Msa0333510:CDS | 35.0% | |
| !! | GTTAGTTTCTCTTACCCTTT+TGG | + | chr2_4:51308223-51308242 | Msa0333510:intron | 35.0% |
| !!! | AGGTTATGTTTTTGGGTTTG+TGG | + | chr2_4:51308356-51308375 | Msa0333510:intron | 35.0% |
| !!! | GGTTATGTTTTTGGGTTTGT+GGG | + | chr2_4:51308357-51308376 | Msa0333510:intron | 35.0% |
| !! | TCTTAGTTTCTGGGTTTTGA+AGG | + | chr2_4:51308422-51308441 | Msa0333510:intron | 35.0% |
| TAACATTTGCCCTTGTCATT+AGG | + | chr2_4:51308678-51308697 | Msa0333510:intron | 35.0% | |
| AACATTTGCCCTTGTCATTA+GGG | + | chr2_4:51308679-51308698 | Msa0333510:intron | 35.0% | |
| ! | GCATTGAAAAGAGCAACTTT+TGG | + | chr2_4:51308734-51308753 | Msa0333510:intron | 35.0% |
| TTGATGAACTCAAAGTGATG+GGG | - | chr2_4:51308817-51308836 | None:intergenic | 35.0% | |
| TGCATTAAACTTAGGAAGGA+AGG | + | chr2_4:51309108-51309127 | Msa0333510:CDS | 35.0% | |
| !! | GCGACTCTTAGATTTTTAGA+AGG | + | chr2_4:51309620-51309639 | Msa0333510:intron | 35.0% |
| ! | CAGATGTACGTTTTCTTAAG+AGG | - | chr2_4:51309646-51309665 | None:intergenic | 35.0% |
| !! | TTTGATGGTAATGGTATCTG+AGG | - | chr2_4:51309933-51309952 | None:intergenic | 35.0% |
| ! | CAAATTGGACAGTCTTTTGA+TGG | - | chr2_4:51309948-51309967 | None:intergenic | 35.0% |
| ACGGTATGAACTCAATACAA+TGG | + | chr2_4:51309975-51309994 | Msa0333510:intron | 35.0% | |
| ACAATGGCTGTTAACATGAT+TGG | + | chr2_4:51309991-51310010 | Msa0333510:intron | 35.0% | |
| CCATCTGCTGAAATCTTAAA+TGG | - | chr2_4:51310118-51310137 | None:intergenic | 35.0% | |
| ! | CCATTTAAGATTTCAGCAGA+TGG | + | chr2_4:51310115-51310134 | Msa0333510:CDS | 35.0% |
| TCGTAATGTCTTGGAAAAGA+TGG | + | chr2_4:51310304-51310323 | Msa0333510:CDS | 35.0% | |
| TGACGATAATAGCAATTGGT+CGG | - | chr2_4:51310380-51310399 | None:intergenic | 35.0% | |
| !! | TATGGCATCAAGGTTTGTTT+TGG | - | chr2_4:51310436-51310455 | None:intergenic | 35.0% |
| ! | TTAATTAAGTCAGTAGTGGG+AGG | + | chr2_4:51310571-51310590 | Msa0333510:intron | 35.0% |
| AAGAATAAATAGGGGAGAGA+AGG | + | chr2_4:51310603-51310622 | Msa0333510:intron | 35.0% | |
| AGAATAAATAGGGGAGAGAA+GGG | + | chr2_4:51310604-51310623 | Msa0333510:intron | 35.0% | |
| ! | ATCCCGATATTGCTGAATTT+TGG | + | chr2_4:51310977-51310996 | Msa0333510:CDS | 35.0% |
| ACCTATCCACAGATTATGTA+TGG | + | chr2_4:51311006-51311025 | Msa0333510:CDS | 35.0% | |
| TCCATACATAATCTGTGGAT+AGG | - | chr2_4:51311010-51311029 | None:intergenic | 35.0% | |
| !! | GTATTGATTTGTCCCCTTAT+TGG | + | chr2_4:51311129-51311148 | Msa0333510:intron | 35.0% |
| AGCATATCAAACCCAATAAG+GGG | - | chr2_4:51311144-51311163 | None:intergenic | 35.0% | |
| AAGAACAAAACTAATGGAGC+CGG | + | chr2_4:51311293-51311312 | Msa0333510:intron | 35.0% | |
| ATTTCCTCAGCAAATTGCAA+AGG | - | chr2_4:51311450-51311469 | None:intergenic | 35.0% | |
| GTGTAGCTTATATGCCAATA+AGG | + | chr2_4:51311552-51311571 | Msa0333510:intron | 35.0% | |
| ! | TTTTTGCACAATGGTGTGTT+AGG | + | chr2_4:51311625-51311644 | Msa0333510:intron | 35.0% |
| !!! | GTAGCTTTTTCAAGTTAACC+AGG | + | chr2_4:51311846-51311865 | Msa0333510:intron | 35.0% |
| ! | TTCGTATTTCTTTTGCGTGT+GGG | + | chr2_4:51311972-51311991 | Msa0333510:intron | 35.0% |
| !! | GGGATGTTTTTAACTATGAC+AGG | - | chr2_4:51312421-51312440 | None:intergenic | 35.0% |
| GATAGAGTTGAAAGAGGGAA+AGG | - | chr2_4:51307929-51307948 | None:intergenic | 40.0% | |
| TGAGAGTGAATGAAAGTGAG+TGG | - | chr2_4:51307960-51307979 | None:intergenic | 40.0% | |
| ATACTTCAGAGATCGCTACA+AGG | + | chr2_4:51308039-51308058 | Msa0333510:CDS | 40.0% | |
| GGAGTGAAGAGAACTTTGAA+AGG | - | chr2_4:51308112-51308131 | None:intergenic | 40.0% | |
| !! | TTTGGGTTTGTGGGTTTTTG+TGG | + | chr2_4:51308366-51308385 | Msa0333510:intron | 40.0% |
| AACATGTGCCCTAATGACAA+GGG | - | chr2_4:51308690-51308709 | None:intergenic | 40.0% | |
| TAACATGTGCCCTAATGACA+AGG | - | chr2_4:51308691-51308710 | None:intergenic | 40.0% | |
| TGTCATTAGGGCACATGTTA+AGG | + | chr2_4:51308691-51308710 | Msa0333510:intron | 40.0% | |
| ATTGTATGCAAGCATCACCA+TGG | + | chr2_4:51308992-51309011 | Msa0333510:intron | 40.0% | |
| GAAGGAAGGTGATATGTCAA+AGG | + | chr2_4:51309122-51309141 | Msa0333510:CDS | 40.0% | |
| !! | GATTGTTGTTTCCTCACTTG+AGG | + | chr2_4:51309175-51309194 | Msa0333510:intron | 40.0% |
| ACATATTGTGTCCTCAAGTG+AGG | - | chr2_4:51309189-51309208 | None:intergenic | 40.0% | |
| ! | GCAGTATTGTTTGTTGCCTT+TGG | + | chr2_4:51309225-51309244 | Msa0333510:intron | 40.0% |
| GGCAATTCTTCACTTGATAG+TGG | - | chr2_4:51309355-51309374 | None:intergenic | 40.0% | |
| ! | TGAAGAATTGCCACTTGAAG+AGG | + | chr2_4:51309363-51309382 | Msa0333510:CDS | 40.0% |
| GCTACAAGGAATCAAAATGG+AGG | - | chr2_4:51309727-51309746 | None:intergenic | 40.0% | |
| ! | TTTTAGTGGAGAGAAAGCGA+CGG | + | chr2_4:51309836-51309855 | Msa0333510:intron | 40.0% |
| GCATATACCATCATCCTCTT+TGG | + | chr2_4:51309905-51309924 | Msa0333510:CDS | 40.0% | |
| !! | GGACAGTCTTTTGATGGTAA+TGG | - | chr2_4:51309942-51309961 | None:intergenic | 40.0% |
| AAAGACTGTCCAATTTGCGA+TGG | + | chr2_4:51309951-51309970 | Msa0333510:CDS | 40.0% | |
| ACCACAAATCACAACAGCAT+TGG | - | chr2_4:51310034-51310053 | None:intergenic | 40.0% | |
| GATATTGCACAGGGTGTAAT+GGG | + | chr2_4:51310067-51310086 | Msa0333510:intron | 40.0% | |
| ! | AAAGAAAGGGCACGTAAAAG+TGG | - | chr2_4:51310254-51310273 | None:intergenic | 40.0% |
| TTAAGATTATGGAGCCCCAT+TGG | + | chr2_4:51310276-51310295 | Msa0333510:intron | 40.0% | |
| AAATGACGACTGACCTCATA+TGG | - | chr2_4:51310335-51310354 | None:intergenic | 40.0% | |
| GCAATTGGTCGGATAGAATT+AGG | - | chr2_4:51310369-51310388 | None:intergenic | 40.0% | |
| CTGATGGTAATAGTACAGAG+AGG | - | chr2_4:51310779-51310798 | None:intergenic | 40.0% | |
| !! | AAGAGAAGCATTCACTCTGA+TGG | - | chr2_4:51310795-51310814 | None:intergenic | 40.0% |
| ! | AGTTAAGCAGGAGTATGACA+AGG | + | chr2_4:51310843-51310862 | Msa0333510:intron | 40.0% |
| ! | GTTAAGCAGGAGTATGACAA+GGG | + | chr2_4:51310844-51310863 | Msa0333510:intron | 40.0% |
| ! | TTAAGCAGGAGTATGACAAG+GGG | + | chr2_4:51310845-51310864 | Msa0333510:intron | 40.0% |
| GAGCAAAGAGGACATTCAAA+CGG | - | chr2_4:51311176-51311195 | None:intergenic | 40.0% | |
| !! | CTAGCATTGACAAGTCCAAA+AGG | - | chr2_4:51311211-51311230 | None:intergenic | 40.0% |
| ! | GCTAGTACTGAACTACTTAG+AGG | + | chr2_4:51311226-51311245 | Msa0333510:intron | 40.0% |
| AACAATAACACGGTTGTGCT+CGG | + | chr2_4:51311348-51311367 | Msa0333510:intron | 40.0% | |
| !! | TCTTCCTTTGCAATTTGCTG+AGG | + | chr2_4:51311443-51311462 | Msa0333510:intron | 40.0% |
| ! | GGATTTTATATTGGTGGGGA+AGG | + | chr2_4:51311711-51311730 | Msa0333510:intron | 40.0% |
| TGAAAAAGCTACTGTATGGG+AGG | - | chr2_4:51311838-51311857 | None:intergenic | 40.0% | |
| ! | CTTCGTATTTCTTTTGCGTG+TGG | + | chr2_4:51311971-51311990 | Msa0333510:intron | 40.0% |
| ! | TTTCTTTTGCGTGTGGGTTT+AGG | + | chr2_4:51311978-51311997 | Msa0333510:intron | 40.0% |
| ! | TTGTTGCTTGTATTCATGGC+TGG | + | chr2_4:51312097-51312116 | Msa0333510:intron | 40.0% |
| !! | CCTTCTTAGCCTTGTAGTAA+GGG | - | chr2_4:51312441-51312460 | None:intergenic | 40.0% |
| TCCACCAAGACCATCAAATT+GGG | + | chr2_4:51312492-51312511 | Msa0333510:CDS | 40.0% | |
| GTTAGTGTCATGTCTCGTGT+AGG | - | chr2_4:51308518-51308537 | None:intergenic | 45.0% | |
| !! | TTGAAGTGTCGGTGCTACAT+AGG | + | chr2_4:51308634-51308653 | Msa0333510:intron | 45.0% |
| TTGCTGCATGGCTTGATTGT+AGG | + | chr2_4:51309057-51309076 | Msa0333510:intron | 45.0% | |
| ! | ATTGTAGGCGGTTGCTACTT+TGG | + | chr2_4:51309072-51309091 | Msa0333510:intron | 45.0% |
| !! | TTGTAGGCGGTTGCTACTTT+GGG | + | chr2_4:51309073-51309092 | Msa0333510:intron | 45.0% |
| ! | AGAGTACTCACCTCTTCAAG+TGG | - | chr2_4:51309376-51309395 | None:intergenic | 45.0% |
| CGCTTTCTCTCCACTAAAAG+TGG | - | chr2_4:51309835-51309854 | None:intergenic | 45.0% | |
| CAGATGCCATTGTCAACAAC+CGG | + | chr2_4:51309871-51309890 | Msa0333510:CDS | 45.0% | |
| AGATGCCATTGTCAACAACC+GGG | + | chr2_4:51309872-51309891 | Msa0333510:CDS | 45.0% | |
| GTATATGCACTAACTCAGCC+CGG | - | chr2_4:51309893-51309912 | None:intergenic | 45.0% | |
| TGAGGATCCAAAGAGGATGA+TGG | - | chr2_4:51309915-51309934 | None:intergenic | 45.0% | |
| TGGTATCTGAGGATCCAAAG+AGG | - | chr2_4:51309922-51309941 | None:intergenic | 45.0% | |
| CTGTCCAATTTGCGATGGAA+CGG | + | chr2_4:51309956-51309975 | Msa0333510:CDS | 45.0% | |
| CATACCGTTCCATCGCAAAT+TGG | - | chr2_4:51309963-51309982 | None:intergenic | 45.0% | |
| GCCAATGCTGTTGTGATTTG+TGG | + | chr2_4:51310030-51310049 | Msa0333510:intron | 45.0% | |
| CGATATTGCACAGGGTGTAA+TGG | + | chr2_4:51310066-51310085 | Msa0333510:intron | 45.0% | |
| ACATTACGAGCTTGCCAATG+GGG | - | chr2_4:51310293-51310312 | None:intergenic | 45.0% | |
| GACATTACGAGCTTGCCAAT+GGG | - | chr2_4:51310294-51310313 | None:intergenic | 45.0% | |
| AGACATTACGAGCTTGCCAA+TGG | - | chr2_4:51310295-51310314 | None:intergenic | 45.0% | |
| TTGGCAAGCTCGTAATGTCT+TGG | + | chr2_4:51310295-51310314 | Msa0333510:CDS | 45.0% | |
| ATCTGAGGATTTGACTGGGA+AGG | + | chr2_4:51310640-51310659 | Msa0333510:intron | 45.0% | |
| TCTGAGGATTTGACTGGGAA+GGG | + | chr2_4:51310641-51310660 | Msa0333510:intron | 45.0% | |
| !! | AAGGGGCCATTTTGGCATTA+GGG | + | chr2_4:51310659-51310678 | Msa0333510:intron | 45.0% |
| !! | ATCCTTTGAAGTCAGTAGGC+CGG | - | chr2_4:51311315-51311334 | None:intergenic | 45.0% |
| TGCTCGGTAGTGATGAAGAT+GGG | + | chr2_4:51311364-51311383 | Msa0333510:intron | 45.0% | |
| ACAATGGTGTGTTAGGCGTA+TGG | + | chr2_4:51311632-51311651 | Msa0333510:intron | 45.0% | |
| TATAGATCCTGACCGTGCAA+AGG | + | chr2_4:51312390-51312409 | Msa0333510:CDS | 45.0% | |
| TGACAGGATCATCCTTTGCA+CGG | - | chr2_4:51312405-51312424 | None:intergenic | 45.0% | |
| CCCTTACTACAAGGCTAAGA+AGG | + | chr2_4:51312438-51312457 | Msa0333510:CDS | 45.0% | |
| !! | GCCTTCTTAGCCTTGTAGTA+AGG | - | chr2_4:51312442-51312461 | None:intergenic | 45.0% |
| !! | TAAGAAGGCACTGGAGAAAG+AGG | + | chr2_4:51312453-51312472 | Msa0333510:CDS | 45.0% |
| ! | CAATTTGATGGTCTTGGTGG+AGG | - | chr2_4:51312493-51312512 | None:intergenic | 45.0% |
| CTCCACCAAGACCATCAAAT+TGG | + | chr2_4:51312491-51312510 | Msa0333510:CDS | 45.0% | |
| CCACCAAGACCATCAAATTG+GGG | + | chr2_4:51312493-51312512 | Msa0333510:CDS | 45.0% | |
| GAGAGCTTAGAAACCAGCTC+AGG | - | chr2_4:51308187-51308206 | None:intergenic | 50.0% | |
| CTGCATGGCTTGATTGTAGG+CGG | + | chr2_4:51309060-51309079 | Msa0333510:intron | 50.0% | |
| !! | TGTAGGCGGTTGCTACTTTG+GGG | + | chr2_4:51309074-51309093 | Msa0333510:intron | 50.0% |
| ! | ACTGTGCGACATGTAGTGGA+TGG | + | chr2_4:51309288-51309307 | Msa0333510:CDS | 50.0% |
| TGTACCATGTGTCGAGGAAG+TGG | + | chr2_4:51309323-51309342 | Msa0333510:CDS | 50.0% | |
| TGTTCCACTTCCTCGACACA+TGG | - | chr2_4:51309330-51309349 | None:intergenic | 50.0% | |
| GGGAGAGAAGGGAAGATTGA+GGG | + | chr2_4:51310615-51310634 | Msa0333510:intron | 50.0% | |
| GGAGAGAAGGGAAGATTGAG+GGG | + | chr2_4:51310616-51310635 | Msa0333510:intron | 50.0% | |
| GGGCATCTGAGGATTTGACT+GGG | + | chr2_4:51310636-51310655 | Msa0333510:intron | 50.0% | |
| CTGAGGATTTGACTGGGAAG+GGG | + | chr2_4:51310642-51310661 | Msa0333510:intron | 50.0% | |
| !! | GAAGGGGCCATTTTGGCATT+AGG | + | chr2_4:51310658-51310677 | Msa0333510:intron | 50.0% |
| GCACCTCCCTAATGCCAAAA+TGG | - | chr2_4:51310668-51310687 | None:intergenic | 50.0% | |
| CTTCTTTGCATTGTCGCCGT+AGG | - | chr2_4:51311037-51311056 | None:intergenic | 50.0% | |
| GTGCTCGGTAGTGATGAAGA+TGG | + | chr2_4:51311363-51311382 | Msa0333510:intron | 50.0% | |
| GGGCTTGAGTAACCCTTGAA+TGG | + | chr2_4:51311690-51311709 | Msa0333510:intron | 50.0% | |
| TAGTTAGGCTGCATGATGCC+TGG | - | chr2_4:51311867-51311886 | None:intergenic | 50.0% | |
| TGTGGGTTTAGGAATCCAGG+TGG | + | chr2_4:51311989-51312008 | Msa0333510:intron | 50.0% | |
| GTGGGTTTAGGAATCCAGGT+GGG | + | chr2_4:51311990-51312009 | Msa0333510:intron | 50.0% | |
| ! | TTCATGGCTGGCTATGCTCT+TGG | + | chr2_4:51312109-51312128 | Msa0333510:intron | 50.0% |
| ! | CTACAAGGCTAAGAAGGCAC+TGG | + | chr2_4:51312444-51312463 | Msa0333510:CDS | 50.0% |
| ! | CCCCAATTTGATGGTCTTGG+TGG | - | chr2_4:51312496-51312515 | None:intergenic | 50.0% |
| CCTAAACGACCTCGCGGTTT+CGG | + | chr2_4:51308001-51308020 | Msa0333510:CDS | 55.0% | |
| ACGAAATTGCCGAAACCGCG+AGG | - | chr2_4:51308013-51308032 | None:intergenic | 55.0% | |
| !! | ATTGCTGGTTCTGCTCCTCG+TGG | + | chr2_4:51308151-51308170 | Msa0333510:CDS | 55.0% |
| TCAGGAACACCAAAGCCACG+AGG | - | chr2_4:51308169-51308188 | None:intergenic | 55.0% | |
| !! | TGGCTTTGGTGTTCCTGAGC+TGG | + | chr2_4:51308171-51308190 | Msa0333510:CDS | 55.0% |
| AGGGACTGTGCGACATGTAG+TGG | + | chr2_4:51309284-51309303 | Msa0333510:intron | 55.0% | |
| !! | TGCGACATGTAGTGGATGGC+AGG | + | chr2_4:51309292-51309311 | Msa0333510:CDS | 55.0% |
| TCGACACATGGTACACCGCA+TGG | - | chr2_4:51309318-51309337 | None:intergenic | 55.0% | |
| ATGCGGTGTACCATGTGTCG+AGG | + | chr2_4:51309317-51309336 | Msa0333510:CDS | 55.0% | |
| CTCAGCCCGGTTGTTGACAA+TGG | - | chr2_4:51309880-51309899 | None:intergenic | 55.0% | |
| GGGGAGAGAAGGGAAGATTG+AGG | + | chr2_4:51310614-51310633 | Msa0333510:intron | 55.0% | |
| !! | GGAAGATTGAGGGGCATCTG+AGG | + | chr2_4:51310625-51310644 | Msa0333510:intron | 55.0% |
| ! | GGGGCATCTGAGGATTTGAC+TGG | + | chr2_4:51310635-51310654 | Msa0333510:intron | 55.0% |
| ! | TGACTGGGAAGGGGCCATTT+TGG | + | chr2_4:51310651-51310670 | Msa0333510:intron | 55.0% |
| !! | GGGCCATTTTGGCATTAGGG+AGG | + | chr2_4:51310662-51310681 | Msa0333510:intron | 55.0% |
| !! | AGCCGGCCTACTGACTTCAA+AGG | + | chr2_4:51311310-51311329 | Msa0333510:intron | 55.0% |
| GCGTGTGGGTTTAGGAATCC+AGG | + | chr2_4:51311986-51312005 | Msa0333510:intron | 55.0% | |
| ! | ATCTCGAAGTTGGTCCCACC+TGG | - | chr2_4:51312007-51312026 | None:intergenic | 55.0% |
| GGACCAACTTCGAGATGACC+TGG | + | chr2_4:51312011-51312030 | Msa0333510:CDS | 55.0% | |
| TGGCCAGGTCATCTCGAAGT+TGG | - | chr2_4:51312017-51312036 | None:intergenic | 55.0% | |
| ACCTGGCCACGAGAAAACCT+GGG | + | chr2_4:51312028-51312047 | Msa0333510:CDS | 55.0% | |
| TCATGCAGAAACTCCCACCC+AGG | - | chr2_4:51312048-51312067 | None:intergenic | 55.0% | |
| GGATCATCCTTTGCACGGTC+AGG | - | chr2_4:51312400-51312419 | None:intergenic | 55.0% | |
| TCGTTTAGGCATGGCGTGGC+GGG | - | chr2_4:51307990-51308009 | None:intergenic | 60.0% | |
| GTCGTTTAGGCATGGCGTGG+CGG | - | chr2_4:51307991-51308010 | None:intergenic | 60.0% | |
| GAGGTCGTTTAGGCATGGCG+TGG | - | chr2_4:51307994-51308013 | None:intergenic | 60.0% | |
| GCCATGCCTAAACGACCTCG+CGG | + | chr2_4:51307995-51308014 | Msa0333510:exon | 60.0% | |
| ACCGCGAGGTCGTTTAGGCA+TGG | - | chr2_4:51307999-51308018 | None:intergenic | 60.0% | |
| CCGAAACCGCGAGGTCGTTT+AGG | - | chr2_4:51308004-51308023 | None:intergenic | 60.0% | |
| GGTTCTGCTCCTCGTGGCTT+TGG | + | chr2_4:51308157-51308176 | Msa0333510:CDS | 60.0% | |
| !! | GTAGTGGATGGCAGGCCATG+CGG | + | chr2_4:51309300-51309319 | Msa0333510:CDS | 60.0% |
| GACCTGGCCACGAGAAAACC+TGG | + | chr2_4:51312027-51312046 | Msa0333510:CDS | 60.0% | |
| ! | ACCCAGGTTTTCTCGTGGCC+AGG | - | chr2_4:51312032-51312051 | None:intergenic | 60.0% |
| TGGCCACGAGAAAACCTGGG+TGG | + | chr2_4:51312031-51312050 | Msa0333510:CDS | 60.0% | |
| GGCCACGAGAAAACCTGGGT+GGG | + | chr2_4:51312032-51312051 | Msa0333510:CDS | 60.0% | |
| ! | CTCCCACCCAGGTTTTCTCG+TGG | - | chr2_4:51312037-51312056 | None:intergenic | 60.0% |
| GCTGGCTATGCTCTTGGCTG+TGG | + | chr2_4:51312115-51312134 | Msa0333510:intron | 60.0% | |
| ! | TTTAGGCATGGCGTGGCGGG+AGG | - | chr2_4:51307987-51308006 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 51307899 | 51312516 | 51307899 | ID=Msa0333510;Name=Msa0333510 |
| chr2_4 | mRNA | 51307899 | 51312516 | 51307899 | ID=Msa0333510-mRNA-1;Parent=Msa0333510;Name=Msa0333510-mRNA-1;_AED=0.11;_eAED=0.11;_QI=99|1|0.88|1|1|1|9|0|325 |
| chr2_4 | exon | 51307899 | 51308222 | 51307899 | ID=Msa0333510-mRNA-1:exon:15329;Parent=Msa0333510-mRNA-1 |
| chr2_4 | exon | 51309079 | 51309143 | 51309079 | ID=Msa0333510-mRNA-1:exon:15330;Parent=Msa0333510-mRNA-1 |
| chr2_4 | exon | 51309286 | 51309384 | 51309286 | ID=Msa0333510-mRNA-1:exon:15331;Parent=Msa0333510-mRNA-1 |
| chr2_4 | exon | 51309842 | 51309977 | 51309842 | ID=Msa0333510-mRNA-1:exon:15332;Parent=Msa0333510-mRNA-1 |
| chr2_4 | exon | 51310079 | 51310138 | 51310079 | ID=Msa0333510-mRNA-1:exon:15333;Parent=Msa0333510-mRNA-1 |
| chr2_4 | exon | 51310281 | 51310340 | 51310281 | ID=Msa0333510-mRNA-1:exon:15334;Parent=Msa0333510-mRNA-1 |
| chr2_4 | exon | 51310955 | 51311077 | 51310955 | ID=Msa0333510-mRNA-1:exon:15335;Parent=Msa0333510-mRNA-1 |
| chr2_4 | exon | 51312000 | 51312068 | 51312000 | ID=Msa0333510-mRNA-1:exon:15336;Parent=Msa0333510-mRNA-1 |
| chr2_4 | exon | 51312379 | 51312516 | 51312379 | ID=Msa0333510-mRNA-1:exon:15337;Parent=Msa0333510-mRNA-1 |
| chr2_4 | five_prime_UTR | 51307899 | 51307997 | 51307899 | ID=Msa0333510-mRNA-1:five_prime_utr;Parent=Msa0333510-mRNA-1 |
| chr2_4 | CDS | 51307998 | 51308222 | 51307998 | ID=Msa0333510-mRNA-1:cds;Parent=Msa0333510-mRNA-1 |
| chr2_4 | CDS | 51309079 | 51309143 | 51309079 | ID=Msa0333510-mRNA-1:cds;Parent=Msa0333510-mRNA-1 |
| chr2_4 | CDS | 51309286 | 51309384 | 51309286 | ID=Msa0333510-mRNA-1:cds;Parent=Msa0333510-mRNA-1 |
| chr2_4 | CDS | 51309842 | 51309977 | 51309842 | ID=Msa0333510-mRNA-1:cds;Parent=Msa0333510-mRNA-1 |
| chr2_4 | CDS | 51310079 | 51310138 | 51310079 | ID=Msa0333510-mRNA-1:cds;Parent=Msa0333510-mRNA-1 |
| chr2_4 | CDS | 51310281 | 51310340 | 51310281 | ID=Msa0333510-mRNA-1:cds;Parent=Msa0333510-mRNA-1 |
| chr2_4 | CDS | 51310955 | 51311077 | 51310955 | ID=Msa0333510-mRNA-1:cds;Parent=Msa0333510-mRNA-1 |
| chr2_4 | CDS | 51312000 | 51312068 | 51312000 | ID=Msa0333510-mRNA-1:cds;Parent=Msa0333510-mRNA-1 |
| chr2_4 | CDS | 51312379 | 51312516 | 51312379 | ID=Msa0333510-mRNA-1:cds;Parent=Msa0333510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
