Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0334760 | XP_003596568.1 | 98.446 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1186 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0334760 | sp|Q69VG1|CIGR1_ORYSJ | 58.092 | 587 | 222 | 10 | 1 | 579 | 1 | 571 | 0.0 | 648 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0334760 | TF | GRAS |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0296470 | Msa0334760 | 0.855534 | 5.915085e-62 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0334760 | MtrunA17_Chr2g0319091 | 98.446 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1186 |
Msa0334760 | MtrunA17_Chr5g0447691 | 64.083 | 387 | 136 | 1 | 195 | 578 | 157 | 543 | 0.0 | 527 |
Msa0334760 | MtrunA17_Chr3g0101141 | 58.871 | 372 | 153 | 0 | 207 | 578 | 170 | 541 | 2.48e-169 | 492 |
Msa0334760 | MtrunA17_Chr5g0445331 | 49.703 | 505 | 208 | 6 | 79 | 578 | 68 | 531 | 3.27e-167 | 486 |
Msa0334760 | MtrunA17_Chr4g0076091 | 48.723 | 470 | 188 | 3 | 117 | 578 | 118 | 542 | 5.90e-158 | 462 |
Msa0334760 | MtrunA17_Chr1g0159461 | 43.785 | 539 | 282 | 7 | 44 | 578 | 70 | 591 | 3.19e-147 | 437 |
Msa0334760 | MtrunA17_Chr2g0290241 | 53.439 | 378 | 169 | 2 | 205 | 578 | 50 | 424 | 5.43e-144 | 423 |
Msa0334760 | MtrunA17_Chr3g0125811 | 53.243 | 370 | 173 | 0 | 210 | 579 | 201 | 570 | 9.99e-144 | 427 |
Msa0334760 | MtrunA17_Chr7g0224271 | 34.592 | 503 | 274 | 9 | 113 | 578 | 188 | 672 | 3.42e-79 | 263 |
Msa0334760 | MtrunA17_Chr4g0031711 | 33.511 | 376 | 245 | 3 | 208 | 578 | 357 | 732 | 7.88e-70 | 239 |
Msa0334760 | MtrunA17_Chr4g0031721 | 32.632 | 380 | 253 | 2 | 202 | 578 | 304 | 683 | 3.11e-68 | 234 |
Msa0334760 | MtrunA17_Chr2g0328391 | 33.511 | 376 | 243 | 4 | 208 | 578 | 295 | 668 | 2.91e-67 | 231 |
Msa0334760 | MtrunA17_Chr7g0236851 | 36.533 | 375 | 222 | 6 | 210 | 578 | 292 | 656 | 2.11e-66 | 228 |
Msa0334760 | MtrunA17_Chr2g0306641 | 36.410 | 390 | 225 | 9 | 195 | 578 | 114 | 486 | 7.12e-66 | 223 |
Msa0334760 | MtrunA17_Chr4g0031701 | 29.583 | 551 | 351 | 11 | 40 | 577 | 98 | 624 | 1.08e-65 | 226 |
Msa0334760 | MtrunA17_Chr4g0031731 | 28.962 | 549 | 357 | 9 | 40 | 577 | 98 | 624 | 1.17e-65 | 225 |
Msa0334760 | MtrunA17_Chr8g0357601 | 35.401 | 387 | 223 | 7 | 208 | 579 | 178 | 552 | 2.16e-63 | 218 |
Msa0334760 | MtrunA17_Chr6g0468561 | 36.623 | 385 | 214 | 10 | 210 | 579 | 293 | 662 | 1.33e-62 | 218 |
Msa0334760 | MtrunA17_Chr3g0110971 | 32.373 | 451 | 251 | 11 | 148 | 578 | 170 | 586 | 1.66e-62 | 216 |
Msa0334760 | MtrunA17_Chr4g0057891 | 31.854 | 383 | 239 | 5 | 209 | 578 | 146 | 519 | 3.10e-62 | 214 |
Msa0334760 | MtrunA17_Chr8g0376381 | 36.170 | 376 | 206 | 12 | 213 | 578 | 170 | 521 | 4.19e-62 | 214 |
Msa0334760 | MtrunA17_Chr7g0238891 | 31.720 | 372 | 253 | 1 | 208 | 578 | 368 | 739 | 6.25e-61 | 215 |
Msa0334760 | MtrunA17_Chr4g0031741 | 32.440 | 373 | 247 | 4 | 208 | 578 | 280 | 649 | 4.97e-60 | 211 |
Msa0334760 | MtrunA17_Chr7g0245601 | 35.422 | 367 | 216 | 7 | 216 | 578 | 442 | 791 | 5.19e-60 | 213 |
Msa0334760 | MtrunA17_Chr2g0328381 | 32.095 | 377 | 243 | 4 | 208 | 578 | 271 | 640 | 1.90e-59 | 209 |
Msa0334760 | MtrunA17_Chr2g0328341 | 31.016 | 374 | 251 | 3 | 208 | 578 | 268 | 637 | 6.54e-58 | 204 |
Msa0334760 | MtrunA17_Chr2g0328431 | 32.048 | 415 | 269 | 7 | 166 | 578 | 250 | 653 | 9.77e-57 | 202 |
Msa0334760 | MtrunA17_Chr2g0328411 | 31.948 | 385 | 258 | 3 | 195 | 578 | 272 | 653 | 3.13e-56 | 201 |
Msa0334760 | MtrunA17_Chr3g0085681 | 30.769 | 416 | 232 | 6 | 213 | 578 | 26 | 435 | 3.49e-56 | 195 |
Msa0334760 | MtrunA17_Chr4g0038851 | 31.395 | 430 | 229 | 8 | 209 | 578 | 45 | 468 | 5.09e-56 | 196 |
Msa0334760 | MtrunA17_Chr4g0039661 | 37.057 | 367 | 203 | 12 | 225 | 578 | 203 | 554 | 2.21e-53 | 191 |
Msa0334760 | MtrunA17_Chr5g0401131 | 31.937 | 382 | 239 | 8 | 212 | 578 | 114 | 489 | 1.43e-51 | 184 |
Msa0334760 | MtrunA17_Chr4g0038761 | 34.771 | 371 | 219 | 10 | 216 | 579 | 88 | 442 | 7.78e-51 | 181 |
Msa0334760 | MtrunA17_Chr4g0057291 | 31.959 | 388 | 233 | 11 | 208 | 578 | 288 | 661 | 1.59e-50 | 185 |
Msa0334760 | MtrunA17_Chr2g0328401 | 30.250 | 400 | 270 | 5 | 163 | 561 | 245 | 636 | 3.07e-48 | 178 |
Msa0334760 | MtrunA17_Chr1g0183641 | 32.546 | 381 | 224 | 12 | 208 | 578 | 119 | 476 | 6.38e-48 | 174 |
Msa0334760 | MtrunA17_Chr2g0328361 | 30.053 | 376 | 227 | 8 | 208 | 578 | 270 | 614 | 7.16e-47 | 174 |
Msa0334760 | MtrunA17_Chr3g0085361 | 32.448 | 339 | 173 | 6 | 289 | 578 | 18 | 349 | 7.69e-47 | 167 |
Msa0334760 | MtrunA17_Chr1g0200401 | 29.247 | 465 | 255 | 17 | 162 | 579 | 22 | 459 | 1.31e-42 | 159 |
Msa0334760 | MtrunA17_Chr3g0114841 | 31.818 | 396 | 231 | 13 | 209 | 578 | 117 | 499 | 2.76e-41 | 156 |
Msa0334760 | MtrunA17_Chr2g0329591 | 29.124 | 388 | 245 | 8 | 211 | 578 | 73 | 450 | 5.40e-41 | 154 |
Msa0334760 | MtrunA17_Chr5g0424131 | 30.928 | 388 | 243 | 10 | 209 | 578 | 118 | 498 | 5.57e-40 | 152 |
Msa0334760 | MtrunA17_Chr2g0328371 | 33.333 | 240 | 155 | 2 | 293 | 531 | 12 | 247 | 1.45e-38 | 142 |
Msa0334760 | MtrunA17_Chr5g0401421 | 25.527 | 427 | 248 | 11 | 209 | 578 | 32 | 445 | 2.17e-33 | 132 |
Msa0334760 | MtrunA17_Chr2g0294461 | 25.831 | 391 | 256 | 10 | 209 | 578 | 207 | 584 | 5.66e-32 | 130 |
Msa0334760 | MtrunA17_Chr5g0396491 | 34.762 | 210 | 130 | 2 | 209 | 417 | 53 | 256 | 1.78e-31 | 127 |
Msa0334760 | MtrunA17_Chr5g0396491 | 42.282 | 149 | 85 | 1 | 431 | 578 | 329 | 477 | 1.01e-29 | 122 |
Msa0334760 | MtrunA17_Chr4g0053901 | 24.197 | 467 | 299 | 9 | 166 | 578 | 2 | 467 | 1.48e-30 | 125 |
Msa0334760 | MtrunA17_Chr2g0294471 | 25.131 | 382 | 267 | 9 | 209 | 578 | 201 | 575 | 1.40e-27 | 117 |
Msa0334760 | MtrunA17_Chr7g0270031 | 24.545 | 440 | 289 | 13 | 151 | 578 | 145 | 553 | 5.70e-27 | 115 |
Msa0334760 | MtrunA17_Chr8g0383981 | 27.543 | 403 | 246 | 17 | 190 | 578 | 125 | 495 | 6.61e-27 | 114 |
Msa0334760 | MtrunA17_Chr7g0230771 | 26.042 | 384 | 268 | 8 | 197 | 578 | 361 | 730 | 9.14e-27 | 115 |
Msa0334760 | MtrunA17_Chr7g0230731 | 25.260 | 384 | 271 | 7 | 197 | 578 | 358 | 727 | 1.27e-25 | 111 |
Msa0334760 | MtrunA17_Chr4g0012071 | 24.786 | 351 | 222 | 9 | 243 | 578 | 227 | 550 | 2.36e-25 | 110 |
Msa0334760 | MtrunA17_Chr1g0194621 | 25.424 | 354 | 231 | 12 | 243 | 578 | 179 | 517 | 5.14e-24 | 105 |
Msa0334760 | MtrunA17_Chr2g0323111 | 25.862 | 174 | 127 | 2 | 406 | 578 | 133 | 305 | 6.86e-16 | 79.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0334760 | AT1G50600.3 | 63.061 | 379 | 140 | 0 | 200 | 578 | 147 | 525 | 4.31e-176 | 509 |
Msa0334760 | AT1G50600.1 | 63.061 | 379 | 140 | 0 | 200 | 578 | 218 | 596 | 1.39e-175 | 510 |
Msa0334760 | AT1G50600.2 | 63.061 | 379 | 140 | 0 | 200 | 578 | 222 | 600 | 1.41e-175 | 510 |
Msa0334760 | AT5G48150.1 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 4.55e-171 | 494 |
Msa0334760 | AT5G48150.4 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 4.55e-171 | 494 |
Msa0334760 | AT5G48150.2 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 4.55e-171 | 494 |
Msa0334760 | AT5G48150.3 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 4.55e-171 | 494 |
Msa0334760 | AT2G04890.1 | 60.317 | 378 | 143 | 1 | 201 | 578 | 42 | 412 | 1.77e-164 | 475 |
Msa0334760 | AT4G17230.1 | 53.806 | 381 | 176 | 0 | 198 | 578 | 144 | 524 | 6.49e-145 | 429 |
Msa0334760 | AT4G17230.2 | 53.806 | 381 | 176 | 0 | 198 | 578 | 144 | 524 | 6.49e-145 | 429 |
Msa0334760 | AT1G21450.1 | 46.039 | 467 | 227 | 7 | 114 | 579 | 151 | 593 | 1.04e-137 | 413 |
Msa0334760 | AT1G07530.1 | 33.600 | 375 | 247 | 2 | 206 | 578 | 390 | 764 | 9.01e-70 | 240 |
Msa0334760 | AT5G52510.1 | 35.844 | 385 | 222 | 6 | 210 | 579 | 266 | 640 | 1.70e-66 | 228 |
Msa0334760 | AT2G29060.2 | 33.867 | 375 | 244 | 3 | 208 | 578 | 280 | 654 | 1.25e-65 | 226 |
Msa0334760 | AT2G29060.1 | 33.867 | 375 | 244 | 3 | 208 | 578 | 317 | 691 | 1.98e-65 | 226 |
Msa0334760 | AT3G03450.1 | 35.027 | 374 | 230 | 7 | 209 | 578 | 180 | 544 | 7.26e-65 | 222 |
Msa0334760 | AT1G66350.1 | 34.667 | 375 | 219 | 9 | 209 | 578 | 152 | 505 | 8.24e-64 | 218 |
Msa0334760 | AT5G17490.1 | 33.957 | 374 | 228 | 8 | 209 | 578 | 157 | 515 | 1.64e-62 | 215 |
Msa0334760 | AT3G46600.2 | 34.140 | 372 | 241 | 4 | 209 | 578 | 1 | 370 | 1.22e-61 | 208 |
Msa0334760 | AT3G46600.1 | 34.316 | 373 | 241 | 4 | 208 | 578 | 208 | 578 | 2.29e-61 | 213 |
Msa0334760 | AT3G46600.3 | 34.316 | 373 | 241 | 4 | 208 | 578 | 176 | 546 | 2.67e-61 | 212 |
Msa0334760 | AT5G59450.1 | 32.626 | 377 | 246 | 4 | 208 | 578 | 223 | 597 | 1.21e-60 | 212 |
Msa0334760 | AT1G14920.1 | 35.544 | 377 | 219 | 10 | 209 | 578 | 169 | 528 | 2.93e-60 | 209 |
Msa0334760 | AT1G50420.1 | 31.323 | 431 | 229 | 5 | 209 | 578 | 54 | 478 | 4.79e-60 | 207 |
Msa0334760 | AT3G54220.1 | 34.383 | 413 | 250 | 9 | 172 | 578 | 252 | 649 | 6.63e-60 | 211 |
Msa0334760 | AT2G01570.1 | 33.862 | 378 | 224 | 9 | 209 | 578 | 221 | 580 | 1.14e-57 | 203 |
Msa0334760 | AT2G37650.2 | 31.720 | 372 | 251 | 2 | 208 | 578 | 331 | 700 | 1.27e-57 | 205 |
Msa0334760 | AT2G37650.1 | 31.720 | 372 | 251 | 2 | 208 | 578 | 343 | 712 | 1.48e-57 | 205 |
Msa0334760 | AT1G07520.2 | 31.316 | 380 | 251 | 6 | 208 | 578 | 150 | 528 | 1.42e-56 | 199 |
Msa0334760 | AT1G07520.4 | 31.316 | 380 | 251 | 6 | 208 | 578 | 150 | 528 | 1.42e-56 | 199 |
Msa0334760 | AT1G07520.1 | 31.579 | 380 | 250 | 6 | 208 | 578 | 314 | 692 | 4.49e-56 | 201 |
Msa0334760 | AT1G07520.3 | 31.316 | 380 | 251 | 6 | 208 | 578 | 315 | 693 | 5.79e-56 | 201 |
Msa0334760 | AT5G66770.1 | 34.383 | 381 | 227 | 10 | 209 | 579 | 217 | 584 | 1.20e-53 | 192 |
Msa0334760 | AT2G29065.1 | 31.234 | 381 | 251 | 6 | 208 | 578 | 248 | 627 | 1.04e-52 | 191 |
Msa0334760 | AT3G50650.1 | 34.635 | 384 | 226 | 10 | 208 | 579 | 172 | 542 | 1.15e-51 | 186 |
Msa0334760 | AT1G55580.1 | 34.304 | 309 | 179 | 6 | 285 | 578 | 145 | 444 | 1.93e-49 | 177 |
Msa0334760 | AT5G41920.1 | 31.738 | 397 | 245 | 8 | 191 | 578 | 20 | 399 | 3.87e-48 | 173 |
Msa0334760 | AT4G37650.1 | 30.102 | 392 | 240 | 10 | 212 | 578 | 146 | 528 | 2.38e-47 | 174 |
Msa0334760 | AT1G63100.1 | 31.877 | 389 | 239 | 8 | 208 | 578 | 248 | 628 | 1.00e-46 | 174 |
Msa0334760 | AT1G63100.2 | 31.877 | 389 | 239 | 8 | 208 | 578 | 273 | 653 | 1.23e-46 | 174 |
Msa0334760 | AT4G08250.1 | 28.198 | 383 | 252 | 10 | 209 | 578 | 104 | 476 | 7.57e-34 | 135 |
Msa0334760 | AT3G49950.1 | 24.031 | 387 | 271 | 9 | 209 | 578 | 27 | 407 | 8.71e-30 | 122 |
Msa0334760 | AT2G45160.1 | 26.171 | 363 | 218 | 12 | 237 | 578 | 305 | 638 | 8.17e-24 | 106 |
Msa0334760 | AT3G60630.1 | 27.723 | 303 | 188 | 8 | 291 | 578 | 335 | 621 | 6.61e-23 | 103 |
Msa0334760 | AT3G13840.1 | 25.109 | 458 | 301 | 14 | 135 | 578 | 80 | 509 | 1.24e-20 | 95.9 |
Msa0334760 | AT5G67411.1 | 34.821 | 112 | 71 | 2 | 405 | 516 | 89 | 198 | 1.83e-11 | 64.3 |
Find 151 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTGTCCCTACTTAAAATT+TGG | 0.130718 | 2_4:-53569825 | Msa0334760:CDS |
AAAGATGGGGCAATGCTCTT+AGG | 0.253125 | 2_4:-53569024 | Msa0334760:CDS |
CTTCAGGCTCTCTGCACTTA+AGG | 0.286477 | 2_4:+53569886 | None:intergenic |
CCAGAGGCTAGGTGCTTATA+TGG | 0.309502 | 2_4:-53569961 | Msa0334760:CDS |
TCACTGCCAAATGGTTTGTT+TGG | 0.328575 | 2_4:-53570629 | Msa0334760:CDS |
TTCAAGTGATGAGTTATAAG+AGG | 0.330718 | 2_4:+53570475 | None:intergenic |
TACCACATCTAATTCTTCAT+TGG | 0.339637 | 2_4:-53570291 | Msa0334760:CDS |
TCCACAAGGGTAACCACTTT+AGG | 0.342806 | 2_4:+53569375 | None:intergenic |
GGCATCCCGGTTGAGTTTCA+TGG | 0.352118 | 2_4:-53569561 | Msa0334760:CDS |
GTGAGTAATTCTTCACCTTC+AGG | 0.364548 | 2_4:+53569870 | None:intergenic |
AGAATGATGTTTGCGTATAA+TGG | 0.372625 | 2_4:+53570447 | None:intergenic |
GCTTTGATGTCTAAGAAATT+CGG | 0.375367 | 2_4:-53569582 | Msa0334760:CDS |
TAATGTGGAGCAGCATTGTT+TGG | 0.392234 | 2_4:-53569232 | Msa0334760:CDS |
GTTTCCAAAGCCAACTTTCA+AGG | 0.393842 | 2_4:+53570604 | None:intergenic |
TTCTAGCCGTTTCTATCAAT+CGG | 0.394967 | 2_4:+53570012 | None:intergenic |
TGCTTCGGCAATGGCTCCAT+TGG | 0.397586 | 2_4:+53569791 | None:intergenic |
CTACTTAAAATTTGGTTACA+TGG | 0.400326 | 2_4:-53569817 | Msa0334760:CDS |
AGCATGTCTCTTGTCACATC+TGG | 0.401716 | 2_4:+53569522 | None:intergenic |
ACACAACACCTTTCTTCAAC+AGG | 0.402167 | 2_4:-53569335 | Msa0334760:CDS |
ACCACATCTAATTCTTCATT+GGG | 0.403891 | 2_4:-53570290 | Msa0334760:CDS |
TTCAGGCTCTCTGCACTTAA+GGG | 0.407636 | 2_4:+53569887 | None:intergenic |
GGATCCTTGAAAGTTGGCTT+TGG | 0.411943 | 2_4:-53570608 | Msa0334760:CDS |
ATCCTCATTCCTGCATGCTT+CGG | 0.417086 | 2_4:+53569776 | None:intergenic |
GTTGCAAGGACGGAAGCATC+AGG | 0.425786 | 2_4:-53569927 | Msa0334760:CDS |
TATCAGACACGGAGAAGCTT+TGG | 0.432770 | 2_4:-53569496 | Msa0334760:CDS |
TCCTAAAGTGGTTACCCTTG+TGG | 0.433600 | 2_4:-53569376 | Msa0334760:CDS |
GAAAATCCGACACGCCTTGT+TGG | 0.433986 | 2_4:-53570354 | Msa0334760:CDS |
AAGGATCCAAACAAACCATT+TGG | 0.437989 | 2_4:+53570623 | None:intergenic |
ATTTGATTGCCTGCTACTGC+TGG | 0.442739 | 2_4:+53570169 | None:intergenic |
CTCCTTGCTATTTCTTGAGA+GGG | 0.443191 | 2_4:+53569260 | None:intergenic |
GTCACATCTGGACCGAAAAC+AGG | 0.445280 | 2_4:+53569534 | None:intergenic |
GGTATCCCATGAAACTCAAC+CGG | 0.448710 | 2_4:+53569555 | None:intergenic |
ATGAGAGGAAAACGGTGAAT+CGG | 0.450658 | 2_4:+53570577 | None:intergenic |
TTGCTCCATGATCTATATCT+CGG | 0.451721 | 2_4:+53570239 | None:intergenic |
GAAATGCTGTGTCTATCAAT+GGG | 0.460974 | 2_4:-53569992 | Msa0334760:CDS |
GTGGTAACTTCGTTATCATC+GGG | 0.461161 | 2_4:+53570308 | None:intergenic |
AGAAATGCTGTGTCTATCAA+TGG | 0.466776 | 2_4:-53569993 | Msa0334760:CDS |
AAGATGGGGCAATGCTCTTA+GGG | 0.467770 | 2_4:-53569023 | Msa0334760:CDS |
CGCACGTGGGGTGCCCCACC+AGG | 0.468298 | 2_4:+53569678 | None:intergenic |
TGAGAGGAAAACGGTGAATC+GGG | 0.469261 | 2_4:+53570578 | None:intergenic |
AACAAACCATTTGGCAGTGA+TGG | 0.470630 | 2_4:+53570632 | None:intergenic |
CCATATAAGCACCTAGCCTC+TGG | 0.472152 | 2_4:+53569961 | None:intergenic |
TGTAGAGAAACGGCGGAAGT+TGG | 0.473337 | 2_4:-53570135 | Msa0334760:CDS |
AAGTCTAGGTTGACAATGGC+TGG | 0.474170 | 2_4:-53569135 | Msa0334760:CDS |
TCTATGAACCTGTTGAAGAA+AGG | 0.480955 | 2_4:+53569327 | None:intergenic |
CAAGCTCTTGCCGCAAGACC+TGG | 0.482569 | 2_4:-53569696 | Msa0334760:CDS |
AGTTACGGTATGAGTAATGC+AGG | 0.483173 | 2_4:-53570677 | Msa0334760:CDS |
CTAGGTGCTTATATGGTAGA+AGG | 0.487203 | 2_4:-53569954 | Msa0334760:CDS |
GCACCCCACGTGCGGATCAC+AGG | 0.488784 | 2_4:-53569669 | Msa0334760:CDS |
GTCGAGCGACACGAACTACT+TGG | 0.488828 | 2_4:-53569165 | Msa0334760:CDS |
TATACACTAGTTGAGAAAGA+TGG | 0.493554 | 2_4:-53569039 | Msa0334760:CDS |
CTCAAAATATGCCCGTGGCA+AGG | 0.495295 | 2_4:-53569631 | Msa0334760:CDS |
TCAAAATATGCCCGTGGCAA+GGG | 0.497303 | 2_4:-53569630 | Msa0334760:CDS |
TTTGAATATATTGTGACCCT+TGG | 0.497550 | 2_4:+53570210 | None:intergenic |
TCGCAGCAACTTTACAGTTA+CGG | 0.498690 | 2_4:-53570692 | Msa0334760:CDS |
GAAGTCTCTTTCTCCTAAAG+TGG | 0.503964 | 2_4:-53569388 | Msa0334760:CDS |
GCATCCCGGTTGAGTTTCAT+GGG | 0.506071 | 2_4:-53569560 | Msa0334760:CDS |
TGCTCCATGATCTATATCTC+GGG | 0.508139 | 2_4:+53570240 | None:intergenic |
TGTCATTGCATGCGAAGGTA+AGG | 0.508199 | 2_4:-53569193 | Msa0334760:CDS |
GGAGCAGCATTGTTTGGCTC+GGG | 0.508648 | 2_4:-53569226 | Msa0334760:CDS |
TGGAGCAGCATTGTTTGGCT+CGG | 0.508972 | 2_4:-53569227 | Msa0334760:CDS |
CGCATGTTACCAGCAGTAGC+AGG | 0.509183 | 2_4:-53570178 | Msa0334760:CDS |
ATACACTAGTTGAGAAAGAT+GGG | 0.509202 | 2_4:-53569038 | Msa0334760:CDS |
GTCTAAGAAATTCGGCATCC+CGG | 0.511547 | 2_4:-53569574 | Msa0334760:CDS |
ATTCCTGCATGCTTCGGCAA+TGG | 0.514666 | 2_4:+53569782 | None:intergenic |
TCTCCTTGCTATTTCTTGAG+AGG | 0.515388 | 2_4:+53569259 | None:intergenic |
GAAGAGGATTCATCGCTACA+AGG | 0.520852 | 2_4:-53570113 | Msa0334760:CDS |
TGTGGTAACTTCGTTATCAT+CGG | 0.521741 | 2_4:+53570307 | None:intergenic |
TGTTTGATTCTTGCTCCACA+AGG | 0.522993 | 2_4:+53569361 | None:intergenic |
TCGCTACAAGGGTTTCCATC+GGG | 0.523010 | 2_4:-53570101 | Msa0334760:CDS |
GATGGAAAAGTTGACATGTA+AGG | 0.524661 | 2_4:+53570650 | None:intergenic |
AACTCAGGAGAAATTCTCTC+TGG | 0.530415 | 2_4:-53570506 | Msa0334760:CDS |
GCTCTTGCCGCAAGACCTGG+TGG | 0.533032 | 2_4:-53569693 | Msa0334760:CDS |
GGCAAGGGACTCGAAGTAGT+TGG | 0.533885 | 2_4:-53569615 | Msa0334760:CDS |
CCGGCCCGAGATATAGATCA+TGG | 0.534861 | 2_4:-53570244 | Msa0334760:CDS |
TCTTGCCGCAAGACCTGGTG+GGG | 0.535298 | 2_4:-53569691 | Msa0334760:CDS |
TTGTTTGGATCCTTGAAAGT+TGG | 0.536165 | 2_4:-53570614 | Msa0334760:CDS |
AGCATCAAGGAAACAGCATC+CGG | 0.536179 | 2_4:-53570263 | Msa0334760:CDS |
ATTTGATATCTGCTTCAGCT+TGG | 0.537926 | 2_4:-53568987 | Msa0334760:CDS |
CGATTCCTGTGATCCGCACG+TGG | 0.541378 | 2_4:+53569664 | None:intergenic |
GAATCAAAATGAGAGGAAAA+CGG | 0.543811 | 2_4:+53570569 | None:intergenic |
TTTGGTTACATGGCTGCCAA+TGG | 0.544829 | 2_4:-53569807 | Msa0334760:CDS |
AGAAGGTCTTGTTGCAAGGA+CGG | 0.548822 | 2_4:-53569937 | Msa0334760:CDS |
AGATTGCTCAAGGAACTCAA+TGG | 0.549437 | 2_4:-53569731 | Msa0334760:CDS |
ATAGACTTTCAGATTGCTCA+AGG | 0.550384 | 2_4:-53569741 | Msa0334760:CDS |
AATCTCAAAAGTCCATCCCT+TGG | 0.551200 | 2_4:+53569414 | None:intergenic |
ATCGCTACAAGGGTTTCCAT+CGG | 0.551375 | 2_4:-53570102 | Msa0334760:CDS |
TCAAGTGATGAGTTATAAGA+GGG | 0.555749 | 2_4:+53570476 | None:intergenic |
GAGCCATTGCCGAAGCATGC+AGG | 0.556222 | 2_4:-53569785 | Msa0334760:CDS |
TAAGCACCTAGCCTCTGGAT+TGG | 0.558693 | 2_4:+53569966 | None:intergenic |
AGAAACTTTAGATTACTACT+TGG | 0.559206 | 2_4:-53569307 | Msa0334760:CDS |
CAGACACGGAGAAGCTTTGG+CGG | 0.563257 | 2_4:-53569493 | Msa0334760:CDS |
GGGTGCCCCACCAGGTCTTG+CGG | 0.563707 | 2_4:+53569686 | None:intergenic |
CTCTTGCCGCAAGACCTGGT+GGG | 0.564705 | 2_4:-53569692 | Msa0334760:CDS |
AAGCTGTGCATGTAGAGAAA+CGG | 0.566125 | 2_4:-53570145 | Msa0334760:CDS |
TTCATTGGGTGAGAGCATCA+AGG | 0.568298 | 2_4:-53570276 | Msa0334760:CDS |
TACTTGGTAAGTGGAAGTCT+AGG | 0.570428 | 2_4:-53569149 | Msa0334760:CDS |
TGCCGAAGCATGCAGGAATG+AGG | 0.572488 | 2_4:-53569778 | Msa0334760:CDS |
GGAACTAGAAACTGCTCTGA+TGG | 0.573852 | 2_4:-53570333 | Msa0334760:CDS |
GTCAATGTCATTGCATGCGA+AGG | 0.575792 | 2_4:-53569198 | Msa0334760:CDS |
CTCCTGAGTTGTGTTGCTCG+TGG | 0.576212 | 2_4:+53570519 | None:intergenic |
GAAACGGCGGAAGTTGGAAG+AGG | 0.580531 | 2_4:-53570129 | Msa0334760:CDS |
TACTTCGAGTCCCTTGCCAC+GGG | 0.580965 | 2_4:+53569620 | None:intergenic |
GACACGAACTACTTGGTAAG+TGG | 0.581297 | 2_4:-53569158 | Msa0334760:CDS |
CCATGATCTATATCTCGGGC+CGG | 0.582570 | 2_4:+53570244 | None:intergenic |
TCTTGAGAGGGTGACATCGA+TGG | 0.582838 | 2_4:+53569272 | None:intergenic |
TGATGTTTGCGTATAATGGT+TGG | 0.588941 | 2_4:+53570451 | None:intergenic |
TGGTAGAAGGTCTTGTTGCA+AGG | 0.589192 | 2_4:-53569941 | Msa0334760:CDS |
TGCATGCGAAGGTAAGGAAA+GGG | 0.591346 | 2_4:-53569187 | Msa0334760:CDS |
CTACTTCGAGTCCCTTGCCA+CGG | 0.591823 | 2_4:+53569619 | None:intergenic |
GGGGAACCAATCCAGAGGCT+AGG | 0.596146 | 2_4:-53569972 | Msa0334760:CDS |
CACCCTCTCAAGAAATAGCA+AGG | 0.600143 | 2_4:-53569262 | Msa0334760:CDS |
TTGCATGCGAAGGTAAGGAA+AGG | 0.601660 | 2_4:-53569188 | Msa0334760:CDS |
CATGGAGCAATGAGCACCAA+GGG | 0.603617 | 2_4:-53570226 | Msa0334760:CDS |
CTAGTTCCAACAAGGCGTGT+CGG | 0.604341 | 2_4:+53570348 | None:intergenic |
GTGTTGATGTGAATAATCCA+AGG | 0.605633 | 2_4:-53569431 | Msa0334760:CDS |
AGCCACGAGCAACACAACTC+AGG | 0.608623 | 2_4:-53570521 | Msa0334760:CDS |
AGTATCAGAATCAAAATGAG+AGG | 0.612504 | 2_4:+53570562 | None:intergenic |
CTGGTGGGGCACCCCACGTG+CGG | 0.613236 | 2_4:-53569677 | Msa0334760:CDS |
GATTCCTGTGATCCGCACGT+GGG | 0.614125 | 2_4:+53569665 | None:intergenic |
ATTCCTGTGATCCGCACGTG+GGG | 0.622362 | 2_4:+53569666 | None:intergenic |
GCTCTGAATAGCATCGCAGA+AGG | 0.622655 | 2_4:+53569064 | None:intergenic |
TAGCAAGGAGAGGATTAATG+TGG | 0.632293 | 2_4:-53569247 | Msa0334760:CDS |
GTTTGATTCTTGCTCCACAA+GGG | 0.635439 | 2_4:+53569362 | None:intergenic |
TTGCAAGGACGGAAGCATCA+GGG | 0.638897 | 2_4:-53569926 | Msa0334760:CDS |
AATTGCTTCAAATCGCCCGA+TGG | 0.642596 | 2_4:+53570086 | None:intergenic |
ATGGGGCAATGCTCTTAGGG+TGG | 0.644351 | 2_4:-53569020 | Msa0334760:CDS |
ACCCAATGAAGAATTAGATG+TGG | 0.646339 | 2_4:+53570289 | None:intergenic |
GATTGCATGTGCCAAAGCCA+TGG | 0.652232 | 2_4:-53570060 | Msa0334760:CDS |
AGCAGTTTCTAGTTCCAACA+AGG | 0.652329 | 2_4:+53570340 | None:intergenic |
CTTAAGTGCAGAGAGCCTGA+AGG | 0.653965 | 2_4:-53569885 | Msa0334760:CDS |
CTACTGCTGGTAACATGCGA+CGG | 0.655149 | 2_4:+53570182 | None:intergenic |
TGGTAACTTCGTTATCATCG+GGG | 0.655578 | 2_4:+53570309 | None:intergenic |
GATGTGAATAATCCAAGGGA+TGG | 0.658106 | 2_4:-53569426 | Msa0334760:CDS |
GTGGAAGTCTAGGTTGACAA+TGG | 0.658484 | 2_4:-53569139 | Msa0334760:CDS |
AAGAGGATTCATCGCTACAA+GGG | 0.662613 | 2_4:-53570112 | Msa0334760:CDS |
GCTGTGTGATGAAGTTGCAG+TGG | 0.663973 | 2_4:+53569462 | None:intergenic |
GAATTCACATAAGAACTCAA+AGG | 0.664196 | 2_4:+53569099 | None:intergenic |
TCATGGAGCAATGAGCACCA+AGG | 0.677430 | 2_4:-53570227 | Msa0334760:CDS |
TCTCAAGAAATAGCAAGGAG+AGG | 0.677996 | 2_4:-53569257 | Msa0334760:CDS |
CTGTGCATGTAGAGAAACGG+CGG | 0.685656 | 2_4:-53570142 | Msa0334760:CDS |
GACATGCTTGATATCAGACA+CGG | 0.687158 | 2_4:-53569507 | Msa0334760:CDS |
CCAGTCTCAAAATATGCCCG+TGG | 0.687941 | 2_4:-53569636 | Msa0334760:CDS |
GTTACGGTATGAGTAATGCA+GGG | 0.691425 | 2_4:-53570676 | Msa0334760:CDS |
GGTAACTTCGTTATCATCGG+GGG | 0.691927 | 2_4:+53570310 | None:intergenic |
CAAGTGATGAGTTATAAGAG+GGG | 0.693938 | 2_4:+53570477 | None:intergenic |
TGTTGATGTGAATAATCCAA+GGG | 0.710085 | 2_4:-53569430 | Msa0334760:CDS |
AAATGCTGTGTCTATCAATG+GGG | 0.714938 | 2_4:-53569991 | Msa0334760:CDS |
TACACTAGTTGAGAAAGATG+GGG | 0.719725 | 2_4:-53569037 | Msa0334760:CDS |
GTATCCCATGAAACTCAACC+GGG | 0.730080 | 2_4:+53569556 | None:intergenic |
TCAATGGGGAACCAATCCAG+AGG | 0.733104 | 2_4:-53569977 | Msa0334760:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATGTAACCAAATTTTAAGTA+GGG | + | chr2_4:53569863-53569882 | None:intergenic | 20.0% |
!!! | ATGTAACCAAATTTTAAGTA+GGG | + | chr2_4:53569863-53569882 | None:intergenic | 20.0% |
!!! | CATGTAACCAAATTTTAAGT+AGG | + | chr2_4:53569864-53569883 | None:intergenic | 25.0% |
! | CTACTTAAAATTTGGTTACA+TGG | - | chr2_4:53569862-53569881 | Msa0334760:CDS | 25.0% |
! | AGAAACTTTAGATTACTACT+TGG | - | chr2_4:53570372-53570391 | Msa0334760:CDS | 25.0% |
!!! | CATGTAACCAAATTTTAAGT+AGG | + | chr2_4:53569864-53569883 | None:intergenic | 25.0% |
! | CTACTTAAAATTTGGTTACA+TGG | - | chr2_4:53569862-53569881 | Msa0334760:CDS | 25.0% |
! | AGAAACTTTAGATTACTACT+TGG | - | chr2_4:53570372-53570391 | Msa0334760:CDS | 25.0% |
GAATCAAAATGAGAGGAAAA+CGG | + | chr2_4:53569113-53569132 | None:intergenic | 30.0% | |
AGTATCAGAATCAAAATGAG+AGG | + | chr2_4:53569120-53569139 | None:intergenic | 30.0% | |
TCAAGTGATGAGTTATAAGA+GGG | + | chr2_4:53569206-53569225 | None:intergenic | 30.0% | |
TTCAAGTGATGAGTTATAAG+AGG | + | chr2_4:53569207-53569226 | None:intergenic | 30.0% | |
AGAATGATGTTTGCGTATAA+TGG | + | chr2_4:53569235-53569254 | None:intergenic | 30.0% | |
TACCACATCTAATTCTTCAT+TGG | - | chr2_4:53569388-53569407 | Msa0334760:CDS | 30.0% | |
ACCACATCTAATTCTTCATT+GGG | - | chr2_4:53569389-53569408 | Msa0334760:CDS | 30.0% | |
TTTGAATATATTGTGACCCT+TGG | + | chr2_4:53569472-53569491 | None:intergenic | 30.0% | |
! | TTTTGACCGATTGATAGAAA+CGG | - | chr2_4:53569661-53569680 | Msa0334760:CDS | 30.0% |
ATCTGTCCCTACTTAAAATT+TGG | - | chr2_4:53569854-53569873 | Msa0334760:CDS | 30.0% | |
GCTTTGATGTCTAAGAAATT+CGG | - | chr2_4:53570097-53570116 | Msa0334760:CDS | 30.0% | |
TGTTGATGTGAATAATCCAA+GGG | - | chr2_4:53570249-53570268 | Msa0334760:CDS | 30.0% | |
GAATTCACATAAGAACTCAA+AGG | + | chr2_4:53570583-53570602 | None:intergenic | 30.0% | |
TATACACTAGTTGAGAAAGA+TGG | - | chr2_4:53570640-53570659 | Msa0334760:CDS | 30.0% | |
ATACACTAGTTGAGAAAGAT+GGG | - | chr2_4:53570641-53570660 | Msa0334760:CDS | 30.0% | |
GAATCAAAATGAGAGGAAAA+CGG | + | chr2_4:53569113-53569132 | None:intergenic | 30.0% | |
AGTATCAGAATCAAAATGAG+AGG | + | chr2_4:53569120-53569139 | None:intergenic | 30.0% | |
TCAAGTGATGAGTTATAAGA+GGG | + | chr2_4:53569206-53569225 | None:intergenic | 30.0% | |
TTCAAGTGATGAGTTATAAG+AGG | + | chr2_4:53569207-53569226 | None:intergenic | 30.0% | |
AGAATGATGTTTGCGTATAA+TGG | + | chr2_4:53569235-53569254 | None:intergenic | 30.0% | |
TACCACATCTAATTCTTCAT+TGG | - | chr2_4:53569388-53569407 | Msa0334760:CDS | 30.0% | |
ACCACATCTAATTCTTCATT+GGG | - | chr2_4:53569389-53569408 | Msa0334760:CDS | 30.0% | |
TTTGAATATATTGTGACCCT+TGG | + | chr2_4:53569472-53569491 | None:intergenic | 30.0% | |
! | TTTTGACCGATTGATAGAAA+CGG | - | chr2_4:53569661-53569680 | Msa0334760:CDS | 30.0% |
ATCTGTCCCTACTTAAAATT+TGG | - | chr2_4:53569854-53569873 | Msa0334760:CDS | 30.0% | |
GCTTTGATGTCTAAGAAATT+CGG | - | chr2_4:53570097-53570116 | Msa0334760:CDS | 30.0% | |
TGTTGATGTGAATAATCCAA+GGG | - | chr2_4:53570249-53570268 | Msa0334760:CDS | 30.0% | |
GAATTCACATAAGAACTCAA+AGG | + | chr2_4:53570583-53570602 | None:intergenic | 30.0% | |
TATACACTAGTTGAGAAAGA+TGG | - | chr2_4:53570640-53570659 | Msa0334760:CDS | 30.0% | |
ATACACTAGTTGAGAAAGAT+GGG | - | chr2_4:53570641-53570660 | Msa0334760:CDS | 30.0% | |
GATGGAAAAGTTGACATGTA+AGG | + | chr2_4:53569032-53569051 | None:intergenic | 35.0% | |
AAGGATCCAAACAAACCATT+TGG | + | chr2_4:53569059-53569078 | None:intergenic | 35.0% | |
TTGTTTGGATCCTTGAAAGT+TGG | - | chr2_4:53569065-53569084 | Msa0334760:CDS | 35.0% | |
CAAGTGATGAGTTATAAGAG+GGG | + | chr2_4:53569205-53569224 | None:intergenic | 35.0% | |
TGATGTTTGCGTATAATGGT+TGG | + | chr2_4:53569231-53569250 | None:intergenic | 35.0% | |
TGTGGTAACTTCGTTATCAT+CGG | + | chr2_4:53569375-53569394 | None:intergenic | 35.0% | |
ACCCAATGAAGAATTAGATG+TGG | + | chr2_4:53569393-53569412 | None:intergenic | 35.0% | |
TTGCTCCATGATCTATATCT+CGG | + | chr2_4:53569443-53569462 | None:intergenic | 35.0% | |
TTCTAGCCGTTTCTATCAAT+CGG | + | chr2_4:53569670-53569689 | None:intergenic | 35.0% | |
AGAAATGCTGTGTCTATCAA+TGG | - | chr2_4:53569686-53569705 | Msa0334760:CDS | 35.0% | |
GAAATGCTGTGTCTATCAAT+GGG | - | chr2_4:53569687-53569706 | Msa0334760:CDS | 35.0% | |
AAATGCTGTGTCTATCAATG+GGG | - | chr2_4:53569688-53569707 | Msa0334760:CDS | 35.0% | |
ATAGACTTTCAGATTGCTCA+AGG | - | chr2_4:53569938-53569957 | Msa0334760:CDS | 35.0% | |
! | TTTCATGGGATACCTGTTTT+CGG | - | chr2_4:53570133-53570152 | Msa0334760:CDS | 35.0% |
! | GTGTTGATGTGAATAATCCA+AGG | - | chr2_4:53570248-53570267 | Msa0334760:CDS | 35.0% |
TCTATGAACCTGTTGAAGAA+AGG | + | chr2_4:53570355-53570374 | None:intergenic | 35.0% | |
TACACTAGTTGAGAAAGATG+GGG | - | chr2_4:53570642-53570661 | Msa0334760:CDS | 35.0% | |
ATTTGATATCTGCTTCAGCT+TGG | - | chr2_4:53570692-53570711 | Msa0334760:CDS | 35.0% | |
GATGGAAAAGTTGACATGTA+AGG | + | chr2_4:53569032-53569051 | None:intergenic | 35.0% | |
AAGGATCCAAACAAACCATT+TGG | + | chr2_4:53569059-53569078 | None:intergenic | 35.0% | |
TTGTTTGGATCCTTGAAAGT+TGG | - | chr2_4:53569065-53569084 | Msa0334760:CDS | 35.0% | |
CAAGTGATGAGTTATAAGAG+GGG | + | chr2_4:53569205-53569224 | None:intergenic | 35.0% | |
TGATGTTTGCGTATAATGGT+TGG | + | chr2_4:53569231-53569250 | None:intergenic | 35.0% | |
TGTGGTAACTTCGTTATCAT+CGG | + | chr2_4:53569375-53569394 | None:intergenic | 35.0% | |
ACCCAATGAAGAATTAGATG+TGG | + | chr2_4:53569393-53569412 | None:intergenic | 35.0% | |
TTGCTCCATGATCTATATCT+CGG | + | chr2_4:53569443-53569462 | None:intergenic | 35.0% | |
TTCTAGCCGTTTCTATCAAT+CGG | + | chr2_4:53569670-53569689 | None:intergenic | 35.0% | |
AGAAATGCTGTGTCTATCAA+TGG | - | chr2_4:53569686-53569705 | Msa0334760:CDS | 35.0% | |
GAAATGCTGTGTCTATCAAT+GGG | - | chr2_4:53569687-53569706 | Msa0334760:CDS | 35.0% | |
AAATGCTGTGTCTATCAATG+GGG | - | chr2_4:53569688-53569707 | Msa0334760:CDS | 35.0% | |
ATAGACTTTCAGATTGCTCA+AGG | - | chr2_4:53569938-53569957 | Msa0334760:CDS | 35.0% | |
! | TTTCATGGGATACCTGTTTT+CGG | - | chr2_4:53570133-53570152 | Msa0334760:CDS | 35.0% |
! | GTGTTGATGTGAATAATCCA+AGG | - | chr2_4:53570248-53570267 | Msa0334760:CDS | 35.0% |
TCTATGAACCTGTTGAAGAA+AGG | + | chr2_4:53570355-53570374 | None:intergenic | 35.0% | |
TACACTAGTTGAGAAAGATG+GGG | - | chr2_4:53570642-53570661 | Msa0334760:CDS | 35.0% | |
ATTTGATATCTGCTTCAGCT+TGG | - | chr2_4:53570692-53570711 | Msa0334760:CDS | 35.0% | |
TCGCAGCAACTTTACAGTTA+CGG | - | chr2_4:53568987-53569006 | Msa0334760:CDS | 40.0% | |
AGTTACGGTATGAGTAATGC+AGG | - | chr2_4:53569002-53569021 | Msa0334760:CDS | 40.0% | |
GTTACGGTATGAGTAATGCA+GGG | - | chr2_4:53569003-53569022 | Msa0334760:CDS | 40.0% | |
! | ACTTTTCCATCACTGCCAAA+TGG | - | chr2_4:53569041-53569060 | Msa0334760:CDS | 40.0% |
AACAAACCATTTGGCAGTGA+TGG | + | chr2_4:53569050-53569069 | None:intergenic | 40.0% | |
!! | TCACTGCCAAATGGTTTGTT+TGG | - | chr2_4:53569050-53569069 | Msa0334760:CDS | 40.0% |
GTTTCCAAAGCCAACTTTCA+AGG | + | chr2_4:53569078-53569097 | None:intergenic | 40.0% | |
ATGAGAGGAAAACGGTGAAT+CGG | + | chr2_4:53569105-53569124 | None:intergenic | 40.0% | |
AACTCAGGAGAAATTCTCTC+TGG | - | chr2_4:53569173-53569192 | Msa0334760:CDS | 40.0% | |
!!! | TGTCGGATTTTCTGGTTACT+TGG | + | chr2_4:53569317-53569336 | None:intergenic | 40.0% |
!! | AGCAGTTTCTAGTTCCAACA+AGG | + | chr2_4:53569342-53569361 | None:intergenic | 40.0% |
TGGTAACTTCGTTATCATCG+GGG | + | chr2_4:53569373-53569392 | None:intergenic | 40.0% | |
GTGGTAACTTCGTTATCATC+GGG | + | chr2_4:53569374-53569393 | None:intergenic | 40.0% | |
TGCTCCATGATCTATATCTC+GGG | + | chr2_4:53569442-53569461 | None:intergenic | 40.0% | |
AAGCTGTGCATGTAGAGAAA+CGG | - | chr2_4:53569534-53569553 | Msa0334760:CDS | 40.0% | |
AAGAGGATTCATCGCTACAA+GGG | - | chr2_4:53569567-53569586 | Msa0334760:CDS | 40.0% | |
!!! | TTCTGTGTTGTTTTCAGCCA+TGG | + | chr2_4:53569639-53569658 | None:intergenic | 40.0% |
CTAGGTGCTTATATGGTAGA+AGG | - | chr2_4:53569725-53569744 | Msa0334760:CDS | 40.0% | |
GTGAGTAATTCTTCACCTTC+AGG | + | chr2_4:53569812-53569831 | None:intergenic | 40.0% | |
AGATTGCTCAAGGAACTCAA+TGG | - | chr2_4:53569948-53569967 | Msa0334760:CDS | 40.0% | |
GACATGCTTGATATCAGACA+CGG | - | chr2_4:53570172-53570191 | Msa0334760:CDS | 40.0% | |
GATGTGAATAATCCAAGGGA+TGG | - | chr2_4:53570253-53570272 | Msa0334760:CDS | 40.0% | |
AATCTCAAAAGTCCATCCCT+TGG | + | chr2_4:53570268-53570287 | None:intergenic | 40.0% | |
!!! | AAGGGATGGACTTTTGAGAT+TGG | - | chr2_4:53570267-53570286 | Msa0334760:CDS | 40.0% |
GAAGTCTCTTTCTCCTAAAG+TGG | - | chr2_4:53570291-53570310 | Msa0334760:CDS | 40.0% | |
GTTTGATTCTTGCTCCACAA+GGG | + | chr2_4:53570320-53570339 | None:intergenic | 40.0% | |
TGTTTGATTCTTGCTCCACA+AGG | + | chr2_4:53570321-53570340 | None:intergenic | 40.0% | |
ACACAACACCTTTCTTCAAC+AGG | - | chr2_4:53570344-53570363 | Msa0334760:CDS | 40.0% | |
!! | CTCCTTGCTATTTCTTGAGA+GGG | + | chr2_4:53570422-53570441 | None:intergenic | 40.0% |
!! | TCTCCTTGCTATTTCTTGAG+AGG | + | chr2_4:53570423-53570442 | None:intergenic | 40.0% |
TCTCAAGAAATAGCAAGGAG+AGG | - | chr2_4:53570422-53570441 | Msa0334760:CDS | 40.0% | |
TAGCAAGGAGAGGATTAATG+TGG | - | chr2_4:53570432-53570451 | Msa0334760:CDS | 40.0% | |
TAATGTGGAGCAGCATTGTT+TGG | - | chr2_4:53570447-53570466 | Msa0334760:CDS | 40.0% | |
TACTTGGTAAGTGGAAGTCT+AGG | - | chr2_4:53570530-53570549 | Msa0334760:CDS | 40.0% | |
TCGCAGCAACTTTACAGTTA+CGG | - | chr2_4:53568987-53569006 | Msa0334760:CDS | 40.0% | |
AGTTACGGTATGAGTAATGC+AGG | - | chr2_4:53569002-53569021 | Msa0334760:CDS | 40.0% | |
GTTACGGTATGAGTAATGCA+GGG | - | chr2_4:53569003-53569022 | Msa0334760:CDS | 40.0% | |
! | ACTTTTCCATCACTGCCAAA+TGG | - | chr2_4:53569041-53569060 | Msa0334760:CDS | 40.0% |
AACAAACCATTTGGCAGTGA+TGG | + | chr2_4:53569050-53569069 | None:intergenic | 40.0% | |
!! | TCACTGCCAAATGGTTTGTT+TGG | - | chr2_4:53569050-53569069 | Msa0334760:CDS | 40.0% |
GTTTCCAAAGCCAACTTTCA+AGG | + | chr2_4:53569078-53569097 | None:intergenic | 40.0% | |
ATGAGAGGAAAACGGTGAAT+CGG | + | chr2_4:53569105-53569124 | None:intergenic | 40.0% | |
AACTCAGGAGAAATTCTCTC+TGG | - | chr2_4:53569173-53569192 | Msa0334760:CDS | 40.0% | |
!!! | TGTCGGATTTTCTGGTTACT+TGG | + | chr2_4:53569317-53569336 | None:intergenic | 40.0% |
!! | AGCAGTTTCTAGTTCCAACA+AGG | + | chr2_4:53569342-53569361 | None:intergenic | 40.0% |
TGGTAACTTCGTTATCATCG+GGG | + | chr2_4:53569373-53569392 | None:intergenic | 40.0% | |
GTGGTAACTTCGTTATCATC+GGG | + | chr2_4:53569374-53569393 | None:intergenic | 40.0% | |
TGCTCCATGATCTATATCTC+GGG | + | chr2_4:53569442-53569461 | None:intergenic | 40.0% | |
AAGCTGTGCATGTAGAGAAA+CGG | - | chr2_4:53569534-53569553 | Msa0334760:CDS | 40.0% | |
AAGAGGATTCATCGCTACAA+GGG | - | chr2_4:53569567-53569586 | Msa0334760:CDS | 40.0% | |
!!! | TTCTGTGTTGTTTTCAGCCA+TGG | + | chr2_4:53569639-53569658 | None:intergenic | 40.0% |
CTAGGTGCTTATATGGTAGA+AGG | - | chr2_4:53569725-53569744 | Msa0334760:CDS | 40.0% | |
GTGAGTAATTCTTCACCTTC+AGG | + | chr2_4:53569812-53569831 | None:intergenic | 40.0% | |
AGATTGCTCAAGGAACTCAA+TGG | - | chr2_4:53569948-53569967 | Msa0334760:CDS | 40.0% | |
GACATGCTTGATATCAGACA+CGG | - | chr2_4:53570172-53570191 | Msa0334760:CDS | 40.0% | |
GATGTGAATAATCCAAGGGA+TGG | - | chr2_4:53570253-53570272 | Msa0334760:CDS | 40.0% | |
AATCTCAAAAGTCCATCCCT+TGG | + | chr2_4:53570268-53570287 | None:intergenic | 40.0% | |
!!! | AAGGGATGGACTTTTGAGAT+TGG | - | chr2_4:53570267-53570286 | Msa0334760:CDS | 40.0% |
GAAGTCTCTTTCTCCTAAAG+TGG | - | chr2_4:53570291-53570310 | Msa0334760:CDS | 40.0% | |
GTTTGATTCTTGCTCCACAA+GGG | + | chr2_4:53570320-53570339 | None:intergenic | 40.0% | |
TGTTTGATTCTTGCTCCACA+AGG | + | chr2_4:53570321-53570340 | None:intergenic | 40.0% | |
ACACAACACCTTTCTTCAAC+AGG | - | chr2_4:53570344-53570363 | Msa0334760:CDS | 40.0% | |
!! | CTCCTTGCTATTTCTTGAGA+GGG | + | chr2_4:53570422-53570441 | None:intergenic | 40.0% |
!! | TCTCCTTGCTATTTCTTGAG+AGG | + | chr2_4:53570423-53570442 | None:intergenic | 40.0% |
TCTCAAGAAATAGCAAGGAG+AGG | - | chr2_4:53570422-53570441 | Msa0334760:CDS | 40.0% | |
TAGCAAGGAGAGGATTAATG+TGG | - | chr2_4:53570432-53570451 | Msa0334760:CDS | 40.0% | |
TAATGTGGAGCAGCATTGTT+TGG | - | chr2_4:53570447-53570466 | Msa0334760:CDS | 40.0% | |
TACTTGGTAAGTGGAAGTCT+AGG | - | chr2_4:53570530-53570549 | Msa0334760:CDS | 40.0% | |
! | GGATCCTTGAAAGTTGGCTT+TGG | - | chr2_4:53569071-53569090 | Msa0334760:CDS | 45.0% |
TGAGAGGAAAACGGTGAATC+GGG | + | chr2_4:53569104-53569123 | None:intergenic | 45.0% | |
GGAACTAGAAACTGCTCTGA+TGG | - | chr2_4:53569346-53569365 | Msa0334760:CDS | 45.0% | |
GGTAACTTCGTTATCATCGG+GGG | + | chr2_4:53569372-53569391 | None:intergenic | 45.0% | |
!! | TTCATTGGGTGAGAGCATCA+AGG | - | chr2_4:53569403-53569422 | Msa0334760:CDS | 45.0% |
AGCATCAAGGAAACAGCATC+CGG | - | chr2_4:53569416-53569435 | Msa0334760:CDS | 45.0% | |
ATTTGATTGCCTGCTACTGC+TGG | + | chr2_4:53569513-53569532 | None:intergenic | 45.0% | |
GAAGAGGATTCATCGCTACA+AGG | - | chr2_4:53569566-53569585 | Msa0334760:CDS | 45.0% | |
ATCGCTACAAGGGTTTCCAT+CGG | - | chr2_4:53569577-53569596 | Msa0334760:CDS | 45.0% | |
AATTGCTTCAAATCGCCCGA+TGG | + | chr2_4:53569596-53569615 | None:intergenic | 45.0% | |
!! | GTTGTTTTCAGCCATGGCTT+TGG | + | chr2_4:53569633-53569652 | None:intergenic | 45.0% |
!! | TGGTAGAAGGTCTTGTTGCA+AGG | - | chr2_4:53569738-53569757 | Msa0334760:CDS | 45.0% |
!! | AGAAGGTCTTGTTGCAAGGA+CGG | - | chr2_4:53569742-53569761 | Msa0334760:CDS | 45.0% |
TTCAGGCTCTCTGCACTTAA+GGG | + | chr2_4:53569795-53569814 | None:intergenic | 45.0% | |
TTTGGTTACATGGCTGCCAA+TGG | - | chr2_4:53569872-53569891 | Msa0334760:CDS | 45.0% | |
ATCCTCATTCCTGCATGCTT+CGG | + | chr2_4:53569906-53569925 | None:intergenic | 45.0% | |
TCAAAATATGCCCGTGGCAA+GGG | - | chr2_4:53570049-53570068 | Msa0334760:CDS | 45.0% | |
GTCTAAGAAATTCGGCATCC+CGG | - | chr2_4:53570105-53570124 | Msa0334760:CDS | 45.0% | |
GTATCCCATGAAACTCAACC+GGG | + | chr2_4:53570126-53570145 | None:intergenic | 45.0% | |
GGTATCCCATGAAACTCAAC+CGG | + | chr2_4:53570127-53570146 | None:intergenic | 45.0% | |
AGCATGTCTCTTGTCACATC+TGG | + | chr2_4:53570160-53570179 | None:intergenic | 45.0% | |
TATCAGACACGGAGAAGCTT+TGG | - | chr2_4:53570183-53570202 | Msa0334760:CDS | 45.0% | |
TCCTAAAGTGGTTACCCTTG+TGG | - | chr2_4:53570303-53570322 | Msa0334760:CDS | 45.0% | |
TCCACAAGGGTAACCACTTT+AGG | + | chr2_4:53570307-53570326 | None:intergenic | 45.0% | |
CACCCTCTCAAGAAATAGCA+AGG | - | chr2_4:53570417-53570436 | Msa0334760:CDS | 45.0% | |
GTCAATGTCATTGCATGCGA+AGG | - | chr2_4:53570481-53570500 | Msa0334760:CDS | 45.0% | |
TGTCATTGCATGCGAAGGTA+AGG | - | chr2_4:53570486-53570505 | Msa0334760:CDS | 45.0% | |
TTGCATGCGAAGGTAAGGAA+AGG | - | chr2_4:53570491-53570510 | Msa0334760:CDS | 45.0% | |
TGCATGCGAAGGTAAGGAAA+GGG | - | chr2_4:53570492-53570511 | Msa0334760:CDS | 45.0% | |
GACACGAACTACTTGGTAAG+TGG | - | chr2_4:53570521-53570540 | Msa0334760:CDS | 45.0% | |
! | GTGGAAGTCTAGGTTGACAA+TGG | - | chr2_4:53570540-53570559 | Msa0334760:CDS | 45.0% |
! | AAGTCTAGGTTGACAATGGC+TGG | - | chr2_4:53570544-53570563 | Msa0334760:CDS | 45.0% |
AAAGATGGGGCAATGCTCTT+AGG | - | chr2_4:53570655-53570674 | Msa0334760:CDS | 45.0% | |
AAGATGGGGCAATGCTCTTA+GGG | - | chr2_4:53570656-53570675 | Msa0334760:CDS | 45.0% | |
! | GGATCCTTGAAAGTTGGCTT+TGG | - | chr2_4:53569071-53569090 | Msa0334760:CDS | 45.0% |
TGAGAGGAAAACGGTGAATC+GGG | + | chr2_4:53569104-53569123 | None:intergenic | 45.0% | |
GGAACTAGAAACTGCTCTGA+TGG | - | chr2_4:53569346-53569365 | Msa0334760:CDS | 45.0% | |
GGTAACTTCGTTATCATCGG+GGG | + | chr2_4:53569372-53569391 | None:intergenic | 45.0% | |
!! | TTCATTGGGTGAGAGCATCA+AGG | - | chr2_4:53569403-53569422 | Msa0334760:CDS | 45.0% |
AGCATCAAGGAAACAGCATC+CGG | - | chr2_4:53569416-53569435 | Msa0334760:CDS | 45.0% | |
ATTTGATTGCCTGCTACTGC+TGG | + | chr2_4:53569513-53569532 | None:intergenic | 45.0% | |
GAAGAGGATTCATCGCTACA+AGG | - | chr2_4:53569566-53569585 | Msa0334760:CDS | 45.0% | |
ATCGCTACAAGGGTTTCCAT+CGG | - | chr2_4:53569577-53569596 | Msa0334760:CDS | 45.0% | |
AATTGCTTCAAATCGCCCGA+TGG | + | chr2_4:53569596-53569615 | None:intergenic | 45.0% | |
!! | GTTGTTTTCAGCCATGGCTT+TGG | + | chr2_4:53569633-53569652 | None:intergenic | 45.0% |
!! | TGGTAGAAGGTCTTGTTGCA+AGG | - | chr2_4:53569738-53569757 | Msa0334760:CDS | 45.0% |
!! | AGAAGGTCTTGTTGCAAGGA+CGG | - | chr2_4:53569742-53569761 | Msa0334760:CDS | 45.0% |
TTCAGGCTCTCTGCACTTAA+GGG | + | chr2_4:53569795-53569814 | None:intergenic | 45.0% | |
TTTGGTTACATGGCTGCCAA+TGG | - | chr2_4:53569872-53569891 | Msa0334760:CDS | 45.0% | |
ATCCTCATTCCTGCATGCTT+CGG | + | chr2_4:53569906-53569925 | None:intergenic | 45.0% | |
TCAAAATATGCCCGTGGCAA+GGG | - | chr2_4:53570049-53570068 | Msa0334760:CDS | 45.0% | |
GTCTAAGAAATTCGGCATCC+CGG | - | chr2_4:53570105-53570124 | Msa0334760:CDS | 45.0% | |
GTATCCCATGAAACTCAACC+GGG | + | chr2_4:53570126-53570145 | None:intergenic | 45.0% | |
GGTATCCCATGAAACTCAAC+CGG | + | chr2_4:53570127-53570146 | None:intergenic | 45.0% | |
AGCATGTCTCTTGTCACATC+TGG | + | chr2_4:53570160-53570179 | None:intergenic | 45.0% | |
TATCAGACACGGAGAAGCTT+TGG | - | chr2_4:53570183-53570202 | Msa0334760:CDS | 45.0% | |
TCCTAAAGTGGTTACCCTTG+TGG | - | chr2_4:53570303-53570322 | Msa0334760:CDS | 45.0% | |
TCCACAAGGGTAACCACTTT+AGG | + | chr2_4:53570307-53570326 | None:intergenic | 45.0% | |
CACCCTCTCAAGAAATAGCA+AGG | - | chr2_4:53570417-53570436 | Msa0334760:CDS | 45.0% | |
GTCAATGTCATTGCATGCGA+AGG | - | chr2_4:53570481-53570500 | Msa0334760:CDS | 45.0% | |
TGTCATTGCATGCGAAGGTA+AGG | - | chr2_4:53570486-53570505 | Msa0334760:CDS | 45.0% | |
TTGCATGCGAAGGTAAGGAA+AGG | - | chr2_4:53570491-53570510 | Msa0334760:CDS | 45.0% | |
TGCATGCGAAGGTAAGGAAA+GGG | - | chr2_4:53570492-53570511 | Msa0334760:CDS | 45.0% | |
GACACGAACTACTTGGTAAG+TGG | - | chr2_4:53570521-53570540 | Msa0334760:CDS | 45.0% | |
! | GTGGAAGTCTAGGTTGACAA+TGG | - | chr2_4:53570540-53570559 | Msa0334760:CDS | 45.0% |
! | AAGTCTAGGTTGACAATGGC+TGG | - | chr2_4:53570544-53570563 | Msa0334760:CDS | 45.0% |
AAAGATGGGGCAATGCTCTT+AGG | - | chr2_4:53570655-53570674 | Msa0334760:CDS | 45.0% | |
AAGATGGGGCAATGCTCTTA+GGG | - | chr2_4:53570656-53570675 | Msa0334760:CDS | 45.0% | |
! | ACAAGGCGTGTCGGATTTTC+TGG | + | chr2_4:53569325-53569344 | None:intergenic | 50.0% |
GAAAATCCGACACGCCTTGT+TGG | - | chr2_4:53569325-53569344 | Msa0334760:CDS | 50.0% | |
CTAGTTCCAACAAGGCGTGT+CGG | + | chr2_4:53569334-53569353 | None:intergenic | 50.0% | |
CCATGATCTATATCTCGGGC+CGG | + | chr2_4:53569438-53569457 | None:intergenic | 50.0% | |
TCATGGAGCAATGAGCACCA+AGG | - | chr2_4:53569452-53569471 | Msa0334760:CDS | 50.0% | |
CATGGAGCAATGAGCACCAA+GGG | - | chr2_4:53569453-53569472 | Msa0334760:CDS | 50.0% | |
CTACTGCTGGTAACATGCGA+CGG | + | chr2_4:53569500-53569519 | None:intergenic | 50.0% | |
CTGTGCATGTAGAGAAACGG+CGG | - | chr2_4:53569537-53569556 | Msa0334760:CDS | 50.0% | |
TGTAGAGAAACGGCGGAAGT+TGG | - | chr2_4:53569544-53569563 | Msa0334760:CDS | 50.0% | |
TCGCTACAAGGGTTTCCATC+GGG | - | chr2_4:53569578-53569597 | Msa0334760:CDS | 50.0% | |
GATTGCATGTGCCAAAGCCA+TGG | - | chr2_4:53569619-53569638 | Msa0334760:CDS | 50.0% | |
TCAATGGGGAACCAATCCAG+AGG | - | chr2_4:53569702-53569721 | Msa0334760:CDS | 50.0% | |
TAAGCACCTAGCCTCTGGAT+TGG | + | chr2_4:53569716-53569735 | None:intergenic | 50.0% | |
CCATATAAGCACCTAGCCTC+TGG | + | chr2_4:53569721-53569740 | None:intergenic | 50.0% | |
CCAGAGGCTAGGTGCTTATA+TGG | - | chr2_4:53569718-53569737 | Msa0334760:CDS | 50.0% | |
!! | TTGCAAGGACGGAAGCATCA+GGG | - | chr2_4:53569753-53569772 | Msa0334760:CDS | 50.0% |
CTTCAGGCTCTCTGCACTTA+AGG | + | chr2_4:53569796-53569815 | None:intergenic | 50.0% | |
CTTAAGTGCAGAGAGCCTGA+AGG | - | chr2_4:53569794-53569813 | Msa0334760:CDS | 50.0% | |
ATTCCTGCATGCTTCGGCAA+TGG | + | chr2_4:53569900-53569919 | None:intergenic | 50.0% | |
!!! | CCACGGGCATATTTTGAGAC+TGG | + | chr2_4:53570046-53570065 | None:intergenic | 50.0% |
CCAGTCTCAAAATATGCCCG+TGG | - | chr2_4:53570043-53570062 | Msa0334760:CDS | 50.0% | |
CTCAAAATATGCCCGTGGCA+AGG | - | chr2_4:53570048-53570067 | Msa0334760:CDS | 50.0% | |
GCATCCCGGTTGAGTTTCAT+GGG | - | chr2_4:53570119-53570138 | Msa0334760:CDS | 50.0% | |
GTCACATCTGGACCGAAAAC+AGG | + | chr2_4:53570148-53570167 | None:intergenic | 50.0% | |
GCTGTGTGATGAAGTTGCAG+TGG | + | chr2_4:53570220-53570239 | None:intergenic | 50.0% | |
TCTTGAGAGGGTGACATCGA+TGG | + | chr2_4:53570410-53570429 | None:intergenic | 50.0% | |
TGGAGCAGCATTGTTTGGCT+CGG | - | chr2_4:53570452-53570471 | Msa0334760:CDS | 50.0% | |
! | GCTCTGAATAGCATCGCAGA+AGG | + | chr2_4:53570618-53570637 | None:intergenic | 50.0% |
! | ACAAGGCGTGTCGGATTTTC+TGG | + | chr2_4:53569325-53569344 | None:intergenic | 50.0% |
GAAAATCCGACACGCCTTGT+TGG | - | chr2_4:53569325-53569344 | Msa0334760:CDS | 50.0% | |
CTAGTTCCAACAAGGCGTGT+CGG | + | chr2_4:53569334-53569353 | None:intergenic | 50.0% | |
CCATGATCTATATCTCGGGC+CGG | + | chr2_4:53569438-53569457 | None:intergenic | 50.0% | |
TCATGGAGCAATGAGCACCA+AGG | - | chr2_4:53569452-53569471 | Msa0334760:CDS | 50.0% | |
CATGGAGCAATGAGCACCAA+GGG | - | chr2_4:53569453-53569472 | Msa0334760:CDS | 50.0% | |
CTACTGCTGGTAACATGCGA+CGG | + | chr2_4:53569500-53569519 | None:intergenic | 50.0% | |
CTGTGCATGTAGAGAAACGG+CGG | - | chr2_4:53569537-53569556 | Msa0334760:CDS | 50.0% | |
TGTAGAGAAACGGCGGAAGT+TGG | - | chr2_4:53569544-53569563 | Msa0334760:CDS | 50.0% | |
TCGCTACAAGGGTTTCCATC+GGG | - | chr2_4:53569578-53569597 | Msa0334760:CDS | 50.0% | |
GATTGCATGTGCCAAAGCCA+TGG | - | chr2_4:53569619-53569638 | Msa0334760:CDS | 50.0% | |
TCAATGGGGAACCAATCCAG+AGG | - | chr2_4:53569702-53569721 | Msa0334760:CDS | 50.0% | |
TAAGCACCTAGCCTCTGGAT+TGG | + | chr2_4:53569716-53569735 | None:intergenic | 50.0% | |
CCATATAAGCACCTAGCCTC+TGG | + | chr2_4:53569721-53569740 | None:intergenic | 50.0% | |
CCAGAGGCTAGGTGCTTATA+TGG | - | chr2_4:53569718-53569737 | Msa0334760:CDS | 50.0% | |
!! | TTGCAAGGACGGAAGCATCA+GGG | - | chr2_4:53569753-53569772 | Msa0334760:CDS | 50.0% |
CTTCAGGCTCTCTGCACTTA+AGG | + | chr2_4:53569796-53569815 | None:intergenic | 50.0% | |
CTTAAGTGCAGAGAGCCTGA+AGG | - | chr2_4:53569794-53569813 | Msa0334760:CDS | 50.0% | |
ATTCCTGCATGCTTCGGCAA+TGG | + | chr2_4:53569900-53569919 | None:intergenic | 50.0% | |
!!! | CCACGGGCATATTTTGAGAC+TGG | + | chr2_4:53570046-53570065 | None:intergenic | 50.0% |
CCAGTCTCAAAATATGCCCG+TGG | - | chr2_4:53570043-53570062 | Msa0334760:CDS | 50.0% | |
CTCAAAATATGCCCGTGGCA+AGG | - | chr2_4:53570048-53570067 | Msa0334760:CDS | 50.0% | |
GCATCCCGGTTGAGTTTCAT+GGG | - | chr2_4:53570119-53570138 | Msa0334760:CDS | 50.0% | |
GTCACATCTGGACCGAAAAC+AGG | + | chr2_4:53570148-53570167 | None:intergenic | 50.0% | |
GCTGTGTGATGAAGTTGCAG+TGG | + | chr2_4:53570220-53570239 | None:intergenic | 50.0% | |
TCTTGAGAGGGTGACATCGA+TGG | + | chr2_4:53570410-53570429 | None:intergenic | 50.0% | |
TGGAGCAGCATTGTTTGGCT+CGG | - | chr2_4:53570452-53570471 | Msa0334760:CDS | 50.0% | |
! | GCTCTGAATAGCATCGCAGA+AGG | + | chr2_4:53570618-53570637 | None:intergenic | 50.0% |
AGCCACGAGCAACACAACTC+AGG | - | chr2_4:53569158-53569177 | Msa0334760:CDS | 55.0% | |
! | CTCCTGAGTTGTGTTGCTCG+TGG | + | chr2_4:53569163-53569182 | None:intergenic | 55.0% |
CCGGCCCGAGATATAGATCA+TGG | - | chr2_4:53569435-53569454 | Msa0334760:CDS | 55.0% | |
CGCATGTTACCAGCAGTAGC+AGG | - | chr2_4:53569501-53569520 | Msa0334760:CDS | 55.0% | |
GAAACGGCGGAAGTTGGAAG+AGG | - | chr2_4:53569550-53569569 | Msa0334760:CDS | 55.0% | |
!! | GTTGCAAGGACGGAAGCATC+AGG | - | chr2_4:53569752-53569771 | Msa0334760:CDS | 55.0% |
TGCTTCGGCAATGGCTCCAT+TGG | + | chr2_4:53569891-53569910 | None:intergenic | 55.0% | |
TGCCGAAGCATGCAGGAATG+AGG | - | chr2_4:53569901-53569920 | Msa0334760:CDS | 55.0% | |
ATTCCTGTGATCCGCACGTG+GGG | + | chr2_4:53570016-53570035 | None:intergenic | 55.0% | |
GATTCCTGTGATCCGCACGT+GGG | + | chr2_4:53570017-53570036 | None:intergenic | 55.0% | |
TACTTCGAGTCCCTTGCCAC+GGG | + | chr2_4:53570062-53570081 | None:intergenic | 55.0% | |
CTACTTCGAGTCCCTTGCCA+CGG | + | chr2_4:53570063-53570082 | None:intergenic | 55.0% | |
GGCAAGGGACTCGAAGTAGT+TGG | - | chr2_4:53570064-53570083 | Msa0334760:CDS | 55.0% | |
GGCATCCCGGTTGAGTTTCA+TGG | - | chr2_4:53570118-53570137 | Msa0334760:CDS | 55.0% | |
! | CAGACACGGAGAAGCTTTGG+CGG | - | chr2_4:53570186-53570205 | Msa0334760:CDS | 55.0% |
! | GGAGCAGCATTGTTTGGCTC+GGG | - | chr2_4:53570453-53570472 | Msa0334760:CDS | 55.0% |
GTCGAGCGACACGAACTACT+TGG | - | chr2_4:53570514-53570533 | Msa0334760:CDS | 55.0% | |
ATGGGGCAATGCTCTTAGGG+TGG | - | chr2_4:53570659-53570678 | Msa0334760:CDS | 55.0% | |
AGCCACGAGCAACACAACTC+AGG | - | chr2_4:53569158-53569177 | Msa0334760:CDS | 55.0% | |
! | CTCCTGAGTTGTGTTGCTCG+TGG | + | chr2_4:53569163-53569182 | None:intergenic | 55.0% |
CCGGCCCGAGATATAGATCA+TGG | - | chr2_4:53569435-53569454 | Msa0334760:CDS | 55.0% | |
CGCATGTTACCAGCAGTAGC+AGG | - | chr2_4:53569501-53569520 | Msa0334760:CDS | 55.0% | |
GAAACGGCGGAAGTTGGAAG+AGG | - | chr2_4:53569550-53569569 | Msa0334760:CDS | 55.0% | |
!! | GTTGCAAGGACGGAAGCATC+AGG | - | chr2_4:53569752-53569771 | Msa0334760:CDS | 55.0% |
TGCTTCGGCAATGGCTCCAT+TGG | + | chr2_4:53569891-53569910 | None:intergenic | 55.0% | |
TGCCGAAGCATGCAGGAATG+AGG | - | chr2_4:53569901-53569920 | Msa0334760:CDS | 55.0% | |
ATTCCTGTGATCCGCACGTG+GGG | + | chr2_4:53570016-53570035 | None:intergenic | 55.0% | |
GATTCCTGTGATCCGCACGT+GGG | + | chr2_4:53570017-53570036 | None:intergenic | 55.0% | |
TACTTCGAGTCCCTTGCCAC+GGG | + | chr2_4:53570062-53570081 | None:intergenic | 55.0% | |
CTACTTCGAGTCCCTTGCCA+CGG | + | chr2_4:53570063-53570082 | None:intergenic | 55.0% | |
GGCAAGGGACTCGAAGTAGT+TGG | - | chr2_4:53570064-53570083 | Msa0334760:CDS | 55.0% | |
GGCATCCCGGTTGAGTTTCA+TGG | - | chr2_4:53570118-53570137 | Msa0334760:CDS | 55.0% | |
! | CAGACACGGAGAAGCTTTGG+CGG | - | chr2_4:53570186-53570205 | Msa0334760:CDS | 55.0% |
! | GGAGCAGCATTGTTTGGCTC+GGG | - | chr2_4:53570453-53570472 | Msa0334760:CDS | 55.0% |
GTCGAGCGACACGAACTACT+TGG | - | chr2_4:53570514-53570533 | Msa0334760:CDS | 55.0% | |
ATGGGGCAATGCTCTTAGGG+TGG | - | chr2_4:53570659-53570678 | Msa0334760:CDS | 55.0% | |
GGGGAACCAATCCAGAGGCT+AGG | - | chr2_4:53569707-53569726 | Msa0334760:CDS | 60.0% | |
GAGCCATTGCCGAAGCATGC+AGG | - | chr2_4:53569894-53569913 | Msa0334760:CDS | 60.0% | |
CAAGCTCTTGCCGCAAGACC+TGG | - | chr2_4:53569983-53570002 | Msa0334760:CDS | 60.0% | |
CTCTTGCCGCAAGACCTGGT+GGG | - | chr2_4:53569987-53570006 | Msa0334760:CDS | 60.0% | |
TCTTGCCGCAAGACCTGGTG+GGG | - | chr2_4:53569988-53570007 | Msa0334760:CDS | 60.0% | |
CGATTCCTGTGATCCGCACG+TGG | + | chr2_4:53570018-53570037 | None:intergenic | 60.0% | |
GGGGAACCAATCCAGAGGCT+AGG | - | chr2_4:53569707-53569726 | Msa0334760:CDS | 60.0% | |
GAGCCATTGCCGAAGCATGC+AGG | - | chr2_4:53569894-53569913 | Msa0334760:CDS | 60.0% | |
CAAGCTCTTGCCGCAAGACC+TGG | - | chr2_4:53569983-53570002 | Msa0334760:CDS | 60.0% | |
CTCTTGCCGCAAGACCTGGT+GGG | - | chr2_4:53569987-53570006 | Msa0334760:CDS | 60.0% | |
TCTTGCCGCAAGACCTGGTG+GGG | - | chr2_4:53569988-53570007 | Msa0334760:CDS | 60.0% | |
CGATTCCTGTGATCCGCACG+TGG | + | chr2_4:53570018-53570037 | None:intergenic | 60.0% | |
GCTCTTGCCGCAAGACCTGG+TGG | - | chr2_4:53569986-53570005 | Msa0334760:CDS | 65.0% | |
GCTCTTGCCGCAAGACCTGG+TGG | - | chr2_4:53569986-53570005 | Msa0334760:CDS | 65.0% | |
GGGTGCCCCACCAGGTCTTG+CGG | + | chr2_4:53569996-53570015 | None:intergenic | 70.0% | |
GCACCCCACGTGCGGATCAC+AGG | - | chr2_4:53570010-53570029 | Msa0334760:CDS | 70.0% | |
GGGTGCCCCACCAGGTCTTG+CGG | + | chr2_4:53569996-53570015 | None:intergenic | 70.0% | |
GCACCCCACGTGCGGATCAC+AGG | - | chr2_4:53570010-53570029 | Msa0334760:CDS | 70.0% | |
! | CTGGTGGGGCACCCCACGTG+CGG | - | chr2_4:53570002-53570021 | Msa0334760:CDS | 75.0% |
! | CTGGTGGGGCACCCCACGTG+CGG | - | chr2_4:53570002-53570021 | Msa0334760:CDS | 75.0% |
!! | CGCACGTGGGGTGCCCCACC+AGG | + | chr2_4:53570004-53570023 | None:intergenic | 80.0% |
!! | CGCACGTGGGGTGCCCCACC+AGG | + | chr2_4:53570004-53570023 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 53568981 | 53570720 | 53568981 | ID=Msa0334760;Name=Msa0334760 |
chr2_4 | mRNA | 53568981 | 53570720 | 53568981 | ID=Msa0334760-mRNA-1;Parent=Msa0334760;Name=Msa0334760-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|-1|0|1|-1|1|1|0|579 |
chr2_4 | exon | 53568981 | 53570720 | 53568981 | ID=Msa0334760-mRNA-1:exon:16150;Parent=Msa0334760-mRNA-1 |
chr2_4 | CDS | 53568981 | 53570720 | 53568981 | ID=Msa0334760-mRNA-1:cds;Parent=Msa0334760-mRNA-1 |
Gene Sequence |
Protein sequence |