Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336850 | XP_003597071.1 | 98.997 | 598 | 6 | 0 | 1 | 598 | 1 | 598 | 0.0 | 1217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336850 | sp|Q9LIR4|ILVD_ARATH | 81.281 | 609 | 102 | 3 | 1 | 598 | 1 | 608 | 0.0 | 1016 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0219930 | Msa0336850 | 0.956588 | 2.070571e-114 | -8.615850e-47 |
| Msa0299210 | Msa0336850 | 0.943991 | 4.418837e-103 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336850 | MtrunA17_Chr2g0323281 | 98.997 | 598 | 6 | 0 | 1 | 598 | 1 | 598 | 0.0 | 1217 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336850 | AT3G23940.1 | 81.281 | 609 | 102 | 3 | 1 | 598 | 1 | 608 | 0.0 | 1016 |
| Msa0336850 | AT3G23940.2 | 80.952 | 609 | 102 | 4 | 1 | 598 | 1 | 606 | 0.0 | 1006 |
Find 202 sgRNAs with CRISPR-Local
Find 570 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACATAGTGTCTGCCTTTC+AGG | 0.107732 | 2_4:+56401013 | Msa0336850:CDS |
| TTTCCAGCCTGGTCACTTTC+AGG | 0.117730 | 2_4:+56400980 | Msa0336850:intron |
| AGGGAAAAGTGGTTATAATT+AGG | 0.154908 | 2_4:+56404814 | Msa0336850:intron |
| CGGCCGAGTATTATGGTTTA+TGG | 0.175518 | 2_4:+56399893 | Msa0336850:CDS |
| TGTGATGCGCCTTGGGATTT+TGG | 0.194793 | 2_4:-56399439 | None:intergenic |
| CCAATTGGTTTGGTTCAAAA+TGG | 0.215142 | 2_4:+56406212 | Msa0336850:CDS |
| GCTTAATCGGCCGAGTATTA+TGG | 0.236530 | 2_4:+56399886 | Msa0336850:CDS |
| GCTCACATTCAAATATTATA+TGG | 0.247778 | 2_4:+56402814 | Msa0336850:CDS |
| CGCAACTCTTGCCCTGGTGC+TGG | 0.248574 | 2_4:+56401728 | Msa0336850:CDS |
| GTGTGGAGTGGTGAGGGTTT+TGG | 0.252172 | 2_4:-56399235 | None:intergenic |
| GGTTCTGTTGCTAAAATTAC+TGG | 0.255922 | 2_4:+56402853 | Msa0336850:CDS |
| GGTTTATGGTGGGACTATTA+AGG | 0.261788 | 2_4:+56399907 | Msa0336850:CDS |
| GGGAAAAGTGGTTATAATTA+GGG | 0.262386 | 2_4:+56404815 | Msa0336850:intron |
| GGTCAATTCACCTGTGCTTC+GGG | 0.267851 | 2_4:-56405282 | None:intergenic |
| CCGTTTAGGTTTAACACTAT+TGG | 0.267962 | 2_4:+56399616 | Msa0336850:CDS |
| AACACCAACAAGTGCAATAA+TGG | 0.278323 | 2_4:+56404878 | Msa0336850:CDS |
| AAAATTCAACTATGTCTAAA+AGG | 0.288719 | 2_4:+56406976 | Msa0336850:three_prime_UTR |
| TTTGGAGTGAGCGCGGAAAA+TGG | 0.294002 | 2_4:-56399217 | None:intergenic |
| TGTTAGTGATGCTATTTCTA+TGG | 0.297967 | 2_4:+56399639 | Msa0336850:CDS |
| TTGTCTGTGCTCATCACTAA+TGG | 0.319858 | 2_4:-56401696 | None:intergenic |
| TTGCAATGGGACGGCTTAAT+CGG | 0.323041 | 2_4:+56399873 | Msa0336850:CDS |
| GCAACTCTTGCCCTGGTGCT+GGG | 0.328886 | 2_4:+56401729 | Msa0336850:CDS |
| GCTCCCATTATTGCACTTGT+TGG | 0.332394 | 2_4:-56404882 | None:intergenic |
| GGGTGTGAGTAGGGAAGAGG+GGG | 0.336897 | 2_4:-56399315 | None:intergenic |
| AATAGGTTGGATTGATTCCT+TGG | 0.350931 | 2_4:+56406951 | Msa0336850:three_prime_UTR |
| GGGGTGTGAGTAGGGAAGAG+GGG | 0.357487 | 2_4:-56399316 | None:intergenic |
| TGGTCAATTCACCTGTGCTT+CGG | 0.357886 | 2_4:-56405283 | None:intergenic |
| GTTAGCTGGTAAATATCTTC+TGG | 0.370078 | 2_4:+56401941 | Msa0336850:CDS |
| ATGTGATTCAGGAAATAATA+AGG | 0.379704 | 2_4:+56402764 | Msa0336850:intron |
| CGACACTCATCCAACTTTAG+TGG | 0.382850 | 2_4:-56401918 | None:intergenic |
| AATGTGAGCTGTCTTCTTGA+TGG | 0.385994 | 2_4:-56402800 | None:intergenic |
| GGGTTCAGTGGAAGGGAGAT+TGG | 0.386715 | 2_4:-56399380 | None:intergenic |
| TGTATCAGTTAGTAATGAAT+AGG | 0.387152 | 2_4:+56406934 | Msa0336850:three_prime_UTR |
| TAACTGATACAACATTCTAT+TGG | 0.388089 | 2_4:-56406922 | None:intergenic |
| CGGAAAATGGGTTTAGGAAT+AGG | 0.389098 | 2_4:-56399204 | None:intergenic |
| ACTCCTTGATTAGCTTTGTA+TGG | 0.389577 | 2_4:-56406329 | None:intergenic |
| TTCCAGCCTGGTCACTTTCA+GGG | 0.392330 | 2_4:+56400981 | Msa0336850:intron |
| AAGCCGGTATGATTCCGTTT+AGG | 0.395452 | 2_4:+56399602 | Msa0336850:CDS |
| TGCCCTGGTGCTGGGGCTTG+TGG | 0.398033 | 2_4:+56401737 | Msa0336850:CDS |
| CCCTCCTTTGTCCGAAGGGC+AGG | 0.404283 | 2_4:+56402633 | Msa0336850:CDS |
| GCAATAATGGGAGCAGGGCT+TGG | 0.409364 | 2_4:+56404891 | Msa0336850:CDS |
| TGAGCGCGGAAAATGGGTTT+AGG | 0.414657 | 2_4:-56399210 | None:intergenic |
| AGGAGGCTCACATGGGTTTG+TGG | 0.419181 | 2_4:+56405245 | Msa0336850:CDS |
| TGATAGTATTGAAACTGTTA+TGG | 0.420877 | 2_4:+56399708 | Msa0336850:CDS |
| ACCAAGTGGGAAATATGTTA+TGG | 0.424001 | 2_4:+56402243 | Msa0336850:CDS |
| TATTGCAGAAGCCATGGTAT+TGG | 0.427861 | 2_4:-56401774 | None:intergenic |
| GTTAGTGATGCTATTTCTAT+GGG | 0.429162 | 2_4:+56399640 | Msa0336850:CDS |
| GATTGCTTGTGATGCGCCTT+GGG | 0.429666 | 2_4:-56399446 | None:intergenic |
| GGAAGGCGGTCCAATTGGTT+TGG | 0.434299 | 2_4:+56406202 | Msa0336850:intron |
| TCTTCTGGAGTTATTGAAGA+TGG | 0.434771 | 2_4:+56401956 | Msa0336850:CDS |
| TAATGCAATGGTTATAGTTA+TGG | 0.436101 | 2_4:+56402019 | Msa0336850:CDS |
| CCAATAGTGTTAAACCTAAA+CGG | 0.436787 | 2_4:-56399616 | None:intergenic |
| GACGCCTTCTTTAACAGCTT+CGG | 0.436848 | 2_4:-56399575 | None:intergenic |
| CTTGTTGGTGTTAACATCTC+AGG | 0.438306 | 2_4:-56404867 | None:intergenic |
| AGAGGGGCCTAAAGGTGGTC+CGG | 0.441258 | 2_4:+56404839 | Msa0336850:CDS |
| TATCCGCTACCTTCTTGAGC+AGG | 0.442235 | 2_4:+56402459 | Msa0336850:CDS |
| GGCTTCTGCAATAGAAGCTA+TGG | 0.444733 | 2_4:+56401784 | Msa0336850:CDS |
| AACTTTAGTGGATCCTCAGC+AGG | 0.450092 | 2_4:-56401906 | None:intergenic |
| ATGTGAGCTGTCTTCTTGAT+GGG | 0.450781 | 2_4:-56402799 | None:intergenic |
| AAAGAGGGCTTGTACTTCTC+TGG | 0.452152 | 2_4:+56402877 | Msa0336850:CDS |
| ATGGAGGAGATGCATATTGC+AGG | 0.456417 | 2_4:-56399548 | None:intergenic |
| ACACCAACAAGTGCAATAAT+GGG | 0.457055 | 2_4:+56404879 | Msa0336850:CDS |
| GTGGAGACGGCGGAGGAGTG+TGG | 0.458595 | 2_4:-56399252 | None:intergenic |
| AAACGGAATCATACCGGCTT+CGG | 0.459460 | 2_4:-56399599 | None:intergenic |
| AGGGAGATTGGTTGAGATGG+AGG | 0.460672 | 2_4:-56399368 | None:intergenic |
| TTGGAGTGAGCGCGGAAAAT+GGG | 0.460786 | 2_4:-56399216 | None:intergenic |
| GGAAGGGAGATTGGTTGAGA+TGG | 0.461148 | 2_4:-56399371 | None:intergenic |
| ACTCAAAGGATCCTCTGAAA+TGG | 0.461447 | 2_4:-56403044 | None:intergenic |
| TTGGATGAGTGTCGGTTAGC+TGG | 0.462370 | 2_4:+56401927 | Msa0336850:CDS |
| GGCTCACATGGGTTTGTGGT+TGG | 0.462556 | 2_4:+56405249 | Msa0336850:CDS |
| CCACCACAAGCCCCAGCACC+AGG | 0.462621 | 2_4:-56401740 | None:intergenic |
| ATGGTTATAGTTATGGCACT+TGG | 0.466130 | 2_4:+56402026 | Msa0336850:CDS |
| GTATAGGAAGGCGGTCCAAT+TGG | 0.467916 | 2_4:+56406197 | Msa0336850:intron |
| GGATATGCGCCGAGAGGGAG+TGG | 0.468944 | 2_4:-56399338 | None:intergenic |
| TGCTGAGGATCCACTAAAGT+TGG | 0.471309 | 2_4:+56401908 | Msa0336850:CDS |
| AGTAGGTAGTGAGTGTAAGA+AGG | 0.472051 | 2_4:-56399175 | None:intergenic |
| TGGTTATAGTTATGGCACTT+GGG | 0.472814 | 2_4:+56402027 | Msa0336850:CDS |
| AAGTCGGTGTTTCCTCCGTC+TGG | 0.474497 | 2_4:+56399512 | Msa0336850:CDS |
| TGGAGGCACGTAGGAAGAAA+TGG | 0.480214 | 2_4:+56406297 | Msa0336850:CDS |
| TCAGTTAGTAATGAATAGGT+TGG | 0.482921 | 2_4:+56406938 | Msa0336850:three_prime_UTR |
| CTTTAACAGCTTCGGAGAGA+TGG | 0.483156 | 2_4:-56399567 | None:intergenic |
| TTAGGAATAGGAGTAGTAGT+AGG | 0.483707 | 2_4:-56399192 | None:intergenic |
| GGATTGCTTGTGATGCGCCT+TGG | 0.486243 | 2_4:-56399447 | None:intergenic |
| GTTACACATCCGCTTGAAGC+AGG | 0.486487 | 2_4:-56406688 | None:intergenic |
| GTTAACATCTCAGGCATTCC+CGG | 0.486785 | 2_4:-56404858 | None:intergenic |
| TACACATATACTTACCTGTA+TGG | 0.488036 | 2_4:-56401818 | None:intergenic |
| ACAAGTGCAATAATGGGAGC+AGG | 0.488293 | 2_4:+56404885 | Msa0336850:CDS |
| TTAGATGGTGACTGTATGAC+TGG | 0.490018 | 2_4:+56402487 | Msa0336850:CDS |
| GGAGGAGTGTGGAGTGGTGA+GGG | 0.492568 | 2_4:-56399241 | None:intergenic |
| ATATGGGAACCTTGCACCAC+AGG | 0.492675 | 2_4:+56402831 | Msa0336850:CDS |
| CGGAGGAGTGTGGAGTGGTG+AGG | 0.493226 | 2_4:-56399242 | None:intergenic |
| CTCACATTCAAATATTATAT+GGG | 0.494054 | 2_4:+56402815 | Msa0336850:CDS |
| CCTGGTGCTGGGGCTTGTGG+TGG | 0.495654 | 2_4:+56401740 | Msa0336850:CDS |
| ATGGCTGCTCAGTGGTATGA+TGG | 0.498652 | 2_4:+56399727 | Msa0336850:CDS |
| AAGAGAGTTGACTGCATTGT+TGG | 0.499912 | 2_4:-56399277 | None:intergenic |
| GGCATTCCCGGACCACCTTT+AGG | 0.500486 | 2_4:-56404846 | None:intergenic |
| TGTTATGGAAGATGTTCATA+AGG | 0.500613 | 2_4:+56402258 | Msa0336850:CDS |
| TTTAGTTTCAGATGAGGAGA+TGG | 0.500756 | 2_4:+56406277 | Msa0336850:CDS |
| TCCATAACATATTTCCCACT+TGG | 0.500968 | 2_4:-56402244 | None:intergenic |
| TCATATTTGCCCCGAAGCAC+AGG | 0.506450 | 2_4:+56405272 | Msa0336850:CDS |
| GTTTCCTCCGTCTGGTACGA+AGG | 0.509135 | 2_4:+56399520 | Msa0336850:CDS |
| CCGAGTATTATGGTTTATGG+TGG | 0.510613 | 2_4:+56399896 | Msa0336850:CDS |
| TGCTAAAATTACTGGGAAAG+AGG | 0.511168 | 2_4:+56402861 | Msa0336850:CDS |
| GATATGCGCCGAGAGGGAGT+GGG | 0.512406 | 2_4:-56399337 | None:intergenic |
| CAACTCTTGCCCTGGTGCTG+GGG | 0.513202 | 2_4:+56401730 | Msa0336850:CDS |
| TGCATTGTTGGTGGTGGAGA+CGG | 0.514476 | 2_4:-56399265 | None:intergenic |
| ATCCGCTACCTTCTTGAGCA+GGG | 0.515882 | 2_4:+56402460 | Msa0336850:CDS |
| ACAAGAACAAAGAGAGGAGG+TGG | 0.518642 | 2_4:-56406885 | None:intergenic |
| GAGGGGCCTAAAGGTGGTCC+GGG | 0.520674 | 2_4:+56404840 | Msa0336850:CDS |
| TGGGAATGTCTCTTCCATAC+AGG | 0.521706 | 2_4:+56401804 | Msa0336850:CDS |
| ATATGCGCCGAGAGGGAGTG+GGG | 0.524717 | 2_4:-56399336 | None:intergenic |
| CCAGGTACGATTATTGCAAT+GGG | 0.526211 | 2_4:+56399860 | Msa0336850:CDS |
| AAAGAAGGCGTCGCCGAAGC+CGG | 0.526533 | 2_4:+56399586 | Msa0336850:CDS |
| CCTTGATTAGCTTTGTATGG+TGG | 0.527040 | 2_4:-56406326 | None:intergenic |
| CTCTCCGAAGCTGTTAAAGA+AGG | 0.527790 | 2_4:+56399571 | Msa0336850:CDS |
| ATTTGCGAGTGATGATATCT+CGG | 0.528099 | 2_4:-56401989 | None:intergenic |
| TTTGCGAGTGATGATATCTC+GGG | 0.529623 | 2_4:-56401988 | None:intergenic |
| GGTGTGAGTAGGGAAGAGGG+GGG | 0.533041 | 2_4:-56399314 | None:intergenic |
| GTTGACTGCATTGTTGGTGG+TGG | 0.535839 | 2_4:-56399271 | None:intergenic |
| ATTAGGGGAGAGGGGCCTAA+AGG | 0.536401 | 2_4:+56404831 | Msa0336850:CDS |
| AGAAGGTAGCGGATAACTGC+AGG | 0.536631 | 2_4:-56402451 | None:intergenic |
| GCCAGGTACGATTATTGCAA+TGG | 0.537519 | 2_4:+56399859 | Msa0336850:CDS |
| ACAAATAATCGAATTTCGCT+CGG | 0.538053 | 2_4:-56406745 | None:intergenic |
| GTGGTTATAATTAGGGGAGA+GGG | 0.540279 | 2_4:+56404822 | Msa0336850:CDS |
| GGTTATAGTTATGGCACTTG+GGG | 0.541562 | 2_4:+56402028 | Msa0336850:CDS |
| CCCATTGCAATAATCGTACC+TGG | 0.543081 | 2_4:-56399860 | None:intergenic |
| CGAGTATTATGGTTTATGGT+GGG | 0.545527 | 2_4:+56399897 | Msa0336850:CDS |
| CATACCTGCCCTTCGGACAA+AGG | 0.545958 | 2_4:-56402637 | None:intergenic |
| ACAACATTCTATTGGTACAA+TGG | 0.552051 | 2_4:-56406914 | None:intergenic |
| GTTATCCGCAACTCTTGCCC+TGG | 0.552508 | 2_4:+56401722 | Msa0336850:CDS |
| GTTGGTGGTGGAGACGGCGG+AGG | 0.552994 | 2_4:-56399259 | None:intergenic |
| CCACCATACAAAGCTAATCA+AGG | 0.554290 | 2_4:+56406326 | Msa0336850:CDS |
| AAACCTAAACGGAATCATAC+CGG | 0.556763 | 2_4:-56399605 | None:intergenic |
| CAGCACCAGGGCAAGAGTTG+CGG | 0.558320 | 2_4:-56401727 | None:intergenic |
| GCTAAAATTACTGGGAAAGA+GGG | 0.559213 | 2_4:+56402862 | Msa0336850:CDS |
| ACAAGCTCATACCTGCCCTT+CGG | 0.561919 | 2_4:-56402644 | None:intergenic |
| ATCTATGGAGAATATGTAAG+TGG | 0.565387 | 2_4:+56401671 | Msa0336850:CDS |
| AATGATTGCTGCCATTTCAG+AGG | 0.565835 | 2_4:+56403033 | Msa0336850:CDS |
| AGCTTCTATTGCAGAAGCCA+TGG | 0.567148 | 2_4:-56401780 | None:intergenic |
| AGAAATACCTTAAAACTCAA+AGG | 0.570148 | 2_4:-56403058 | None:intergenic |
| CAACAGAACCCTGTGGTGCA+AGG | 0.570810 | 2_4:-56402840 | None:intergenic |
| AATTAAGTGCAACACAGCAT+TGG | 0.571085 | 2_4:-56402057 | None:intergenic |
| CCACCATAAACCATAATACT+CGG | 0.574808 | 2_4:-56399896 | None:intergenic |
| GATGGGAATATCTCTATCCC+TGG | 0.579378 | 2_4:+56399745 | Msa0336850:CDS |
| CAAATCACTACGTAATGCAA+TGG | 0.580078 | 2_4:+56402007 | Msa0336850:CDS |
| TTTACGGATATGCGCCGAGA+GGG | 0.580426 | 2_4:-56399343 | None:intergenic |
| AGGGGAGAGGGGCCTAAAGG+TGG | 0.580612 | 2_4:+56404834 | Msa0336850:CDS |
| AGTTTCAGATGAGGAGATGG+AGG | 0.581157 | 2_4:+56406280 | Msa0336850:CDS |
| CACTAAAGTTGGATGAGTGT+CGG | 0.583464 | 2_4:+56401919 | Msa0336850:CDS |
| GTTCTGTTGCTAAAATTACT+GGG | 0.584915 | 2_4:+56402854 | Msa0336850:CDS |
| TTGCTGATCTTAAACCAAGT+GGG | 0.585342 | 2_4:+56402230 | Msa0336850:CDS |
| CAAGATGCATATAAATGCAC+CGG | 0.585580 | 2_4:-56406808 | None:intergenic |
| TAATCAAGGAGTTCTGTACA+AGG | 0.587317 | 2_4:+56406340 | Msa0336850:CDS |
| GCTTCTGCAATAGAAGCTAT+GGG | 0.587369 | 2_4:+56401785 | Msa0336850:CDS |
| TAGCTCATCTACCCCTGCTG+AGG | 0.587403 | 2_4:+56401893 | Msa0336850:intron |
| AGTGGTTATAATTAGGGGAG+AGG | 0.589058 | 2_4:+56404821 | Msa0336850:CDS |
| TAACAGCTTCGGAGAGATGG+AGG | 0.590889 | 2_4:-56399564 | None:intergenic |
| GGTTTAAGATCAGCAATGAA+AGG | 0.596756 | 2_4:-56402223 | None:intergenic |
| GCATCACAAGCAATCCTCTA+CGG | 0.596788 | 2_4:+56399454 | Msa0336850:CDS |
| GCCTCCTGAAAATCTTCCGT+CGG | 0.597517 | 2_4:-56405229 | None:intergenic |
| CCTGCCCTTCGGACAAAGGA+GGG | 0.597677 | 2_4:-56402633 | None:intergenic |
| TGGCTGCTCAGTGGTATGAT+GGG | 0.598046 | 2_4:+56399728 | Msa0336850:CDS |
| CACCACAAGCCCCAGCACCA+GGG | 0.598273 | 2_4:-56401739 | None:intergenic |
| AAGGGTTTCTCGTACCTGAA+AGG | 0.600406 | 2_4:-56401027 | None:intergenic |
| AGAGTTGACTGCATTGTTGG+TGG | 0.600708 | 2_4:-56399274 | None:intergenic |
| AATGTGAAGCCTGCTTCAAG+CGG | 0.600752 | 2_4:+56406679 | Msa0336850:CDS |
| GGAAAAGTGGTTATAATTAG+GGG | 0.602105 | 2_4:+56404816 | Msa0336850:CDS |
| ATTGCTGATCTTAAACCAAG+TGG | 0.603106 | 2_4:+56402229 | Msa0336850:CDS |
| GGTGTTTCCTTCGTACCAGA+CGG | 0.603762 | 2_4:-56399527 | None:intergenic |
| TCTTTGATTGTATAGGAAGG+CGG | 0.609260 | 2_4:+56406188 | Msa0336850:intron |
| TATGGGAACCTTGCACCACA+GGG | 0.609311 | 2_4:+56402832 | Msa0336850:CDS |
| GACGGCGGAGGAGTGTGGAG+TGG | 0.613705 | 2_4:-56399247 | None:intergenic |
| CAAACTATAACACATCCCTC+TGG | 0.616653 | 2_4:-56399665 | None:intergenic |
| ACTTTAGTGGATCCTCAGCA+GGG | 0.617910 | 2_4:-56401905 | None:intergenic |
| AGCCCTGCTCAAGAAGGTAG+CGG | 0.618317 | 2_4:-56402462 | None:intergenic |
| GTACGATTATTGCAATGGGA+CGG | 0.618329 | 2_4:+56399864 | Msa0336850:CDS |
| ACCTGCCCTTCGGACAAAGG+AGG | 0.618941 | 2_4:-56402634 | None:intergenic |
| CAAGTGCAATAATGGGAGCA+GGG | 0.619179 | 2_4:+56404886 | Msa0336850:CDS |
| CTATTTCTATGGGGACCAGA+GGG | 0.619479 | 2_4:+56399650 | Msa0336850:CDS |
| ATGAGGAGATGGAGGCACGT+AGG | 0.619919 | 2_4:+56406288 | Msa0336850:CDS |
| GTATCACCCTGAAAGTGACC+AGG | 0.624750 | 2_4:-56400987 | None:intergenic |
| TATGCGCCGAGAGGGAGTGG+GGG | 0.627445 | 2_4:-56399335 | None:intergenic |
| GCTATTTCTATGGGGACCAG+AGG | 0.631937 | 2_4:+56399649 | Msa0336850:CDS |
| AATGGGAGCAGGGCTTGGAA+AGG | 0.632169 | 2_4:+56404896 | Msa0336850:CDS |
| CAAGCAATCCTCTACGGTGT+CGG | 0.632336 | 2_4:+56399460 | Msa0336850:CDS |
| GTCAATTCACCTGTGCTTCG+GGG | 0.638435 | 2_4:-56405281 | None:intergenic |
| TGGTTATAATTAGGGGAGAG+GGG | 0.645447 | 2_4:+56404823 | Msa0336850:CDS |
| ATTGTTGGTGGTGGAGACGG+CGG | 0.647416 | 2_4:-56399262 | None:intergenic |
| GTTATAGTTATGGCACTTGG+GGG | 0.651003 | 2_4:+56402029 | Msa0336850:CDS |
| GATGTTGCTTTATTGACCGA+CGG | 0.651827 | 2_4:+56405213 | Msa0336850:CDS |
| ATCACCGAACCAAAATCCCA+AGG | 0.655043 | 2_4:+56399430 | Msa0336850:CDS |
| AAATAAACAAGAACAAAGAG+AGG | 0.658648 | 2_4:-56406891 | None:intergenic |
| CGGAGAGGCCGACACCGTAG+AGG | 0.660463 | 2_4:-56399468 | None:intergenic |
| TTAGTGATGCTATTTCTATG+GGG | 0.661423 | 2_4:+56399641 | Msa0336850:CDS |
| TTGCGAGTGATGATATCTCG+GGG | 0.664575 | 2_4:-56401987 | None:intergenic |
| TAAACAAGAACAAAGAGAGG+AGG | 0.669056 | 2_4:-56406888 | None:intergenic |
| TGTGTAACAGACGAGTAGAG+AGG | 0.671695 | 2_4:+56406703 | Msa0336850:exon |
| GTTTCCTTCGTACCAGACGG+AGG | 0.686800 | 2_4:-56399524 | None:intergenic |
| AATGTATACAGCCAATACCA+TGG | 0.690672 | 2_4:+56401763 | Msa0336850:CDS |
| ACGGAGGAAACACCGACTTG+TGG | 0.692885 | 2_4:-56399508 | None:intergenic |
| CTTTAGTGGATCCTCAGCAG+GGG | 0.705531 | 2_4:-56401904 | None:intergenic |
| AAACTGTTATGGCTGCTCAG+TGG | 0.737340 | 2_4:+56399719 | Msa0336850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATAGTAATAATAGA+GGG | - | chr2_4:56402316-56402335 | None:intergenic | 10.0% |
| !! | TAAAATAATAGTAATAATAG+AGG | - | chr2_4:56402317-56402336 | None:intergenic | 10.0% |
| !!! | TAATCAATTTTATGAATTAT+GGG | - | chr2_4:56404489-56404508 | None:intergenic | 10.0% |
| !!! | ATAATCAATTTTATGAATTA+TGG | - | chr2_4:56404490-56404509 | None:intergenic | 10.0% |
| !! | GATAAAAAATATAAAAAGAA+AGG | - | chr2_4:56405069-56405088 | None:intergenic | 10.0% |
| !!! | TTTTAATTAGAAATAGAAAA+AGG | + | chr2_4:56405958-56405977 | Msa0336850:intron | 10.0% |
| !!! | TATATGATTTTCATTATTTA+TGG | + | chr2_4:56406840-56406859 | Msa0336850:three_prime_UTR | 10.0% |
| !!! | AGAATTAATTTTGACATTTT+TGG | - | chr2_4:56400270-56400289 | None:intergenic | 15.0% |
| !!! | CTAAAATTTTAAATTTTGCA+TGG | - | chr2_4:56401130-56401149 | None:intergenic | 15.0% |
| !!! | TGCAAAATTTAAAATTTTAG+AGG | + | chr2_4:56401130-56401149 | Msa0336850:intron | 15.0% |
| !! | AAAAATAAAATGAATTTGTC+AGG | + | chr2_4:56401597-56401616 | Msa0336850:intron | 15.0% |
| !! | AAAATAAAATGAATTTGTCA+GGG | + | chr2_4:56401598-56401617 | Msa0336850:intron | 15.0% |
| !!! | ATTAATGTTTCATTCATTTT+TGG | + | chr2_4:56401637-56401656 | Msa0336850:intron | 15.0% |
| !!! | TGAAGATTTTATATATCAAT+AGG | - | chr2_4:56402120-56402139 | None:intergenic | 15.0% |
| !! | TATCAAAATATGAAAAGAAA+AGG | - | chr2_4:56402418-56402437 | None:intergenic | 15.0% |
| !!! | AAATCATTGTGTTTTTTTTT+TGG | + | chr2_4:56403956-56403975 | Msa0336850:intron | 15.0% |
| !!! | TTTATTGAGATTTTCATATA+TGG | - | chr2_4:56405040-56405059 | None:intergenic | 15.0% |
| !! | TGCATTTAATAATTTATGTA+AGG | + | chr2_4:56405407-56405426 | Msa0336850:intron | 15.0% |
| !! | GCATTTAATAATTTATGTAA+GGG | + | chr2_4:56405408-56405427 | Msa0336850:intron | 15.0% |
| !! | TTCTAATTAAAAACATCAAA+AGG | - | chr2_4:56405950-56405969 | None:intergenic | 15.0% |
| !!! | TTTTACATTTTTATTGAGAA+TGG | + | chr2_4:56406399-56406418 | Msa0336850:intron | 15.0% |
| !!! | TTTTCTTTCTTTTAATTCAA+AGG | + | chr2_4:56406494-56406513 | Msa0336850:intron | 15.0% |
| !! | TGTCAATTGATTATAATTGT+TGG | + | chr2_4:56400016-56400035 | Msa0336850:intron | 20.0% |
| !!! | TAAATTTTTTAGCTTCAAGT+AGG | + | chr2_4:56400201-56400220 | Msa0336850:intron | 20.0% |
| !!! | ATGTATTTGTTAAAACTTAC+TGG | + | chr2_4:56400726-56400745 | Msa0336850:intron | 20.0% |
| !!! | TGTATTTGTTAAAACTTACT+GGG | + | chr2_4:56400727-56400746 | Msa0336850:intron | 20.0% |
| !!! | AGTACATCAATTTTATTCAA+GGG | - | chr2_4:56400784-56400803 | None:intergenic | 20.0% |
| !!! | AAGTACATCAATTTTATTCA+AGG | - | chr2_4:56400785-56400804 | None:intergenic | 20.0% |
| !! | AATAAAATTGATGTACTTCA+GGG | + | chr2_4:56400787-56400806 | Msa0336850:intron | 20.0% |
| !!! | TTTTGTACAAAACTATGAAA+CGG | + | chr2_4:56401327-56401346 | Msa0336850:intron | 20.0% |
| !! | TTTGTGATTAAAAGTGAAAA+TGG | + | chr2_4:56401376-56401395 | Msa0336850:intron | 20.0% |
| !! | AAGTATATGTGTAGAATTTA+AGG | + | chr2_4:56401828-56401847 | Msa0336850:intron | 20.0% |
| !! | AGTATATGTGTAGAATTTAA+GGG | + | chr2_4:56401829-56401848 | Msa0336850:intron | 20.0% |
| !!! | ATCATTATCATTATTTTTGC+TGG | + | chr2_4:56402336-56402355 | Msa0336850:intron | 20.0% |
| !!! | CTTTTCATATTTTGATAGAT+TGG | + | chr2_4:56402421-56402440 | Msa0336850:intron | 20.0% |
| !! | CTCACATTCAAATATTATAT+GGG | + | chr2_4:56402815-56402834 | Msa0336850:CDS | 20.0% |
| !! | CAAAAAATGATATATTTGAC+AGG | + | chr2_4:56403147-56403166 | Msa0336850:intron | 20.0% |
| !! | AATGCTAAATTCAAATTGTT+AGG | + | chr2_4:56403206-56403225 | Msa0336850:intron | 20.0% |
| !! | ATGCTAAATTCAAATTGTTA+GGG | + | chr2_4:56403207-56403226 | Msa0336850:intron | 20.0% |
| !!! | AGTAATATATGGAAGTATTA+TGG | + | chr2_4:56403253-56403272 | Msa0336850:intron | 20.0% |
| !!! | ACACTTTTCTTTAAATTTGA+CGG | - | chr2_4:56403448-56403467 | None:intergenic | 20.0% |
| !! | ATAAATAACAAGGTAAGTAT+GGG | - | chr2_4:56404575-56404594 | None:intergenic | 20.0% |
| !! | TAAAAATTGTAAAAGTCCTA+AGG | - | chr2_4:56405003-56405022 | None:intergenic | 20.0% |
| !! | ACTAAAATGATTACAAAGTA+TGG | - | chr2_4:56405306-56405325 | None:intergenic | 20.0% |
| !! | AATCTTTAAATTTGGTCAAA+TGG | + | chr2_4:56405374-56405393 | Msa0336850:intron | 20.0% |
| !!! | TTTTTCTAAATAGACAAAGA+TGG | - | chr2_4:56405776-56405795 | None:intergenic | 20.0% |
| !! | AAATAGAAAAAGGAATATAC+CGG | + | chr2_4:56405968-56405987 | Msa0336850:intron | 20.0% |
| !!! | TGTAAAAACATAATCTTTTC+TGG | - | chr2_4:56406386-56406405 | None:intergenic | 20.0% |
| !!! | AACCAAATTTGTTTTCTTTT+TGG | + | chr2_4:56406641-56406660 | Msa0336850:intron | 20.0% |
| !! | ATCCAAAAAGAAAACAAATT+TGG | - | chr2_4:56406646-56406665 | None:intergenic | 20.0% |
| !! | AAAATTCAACTATGTCTAAA+AGG | + | chr2_4:56406976-56406995 | Msa0336850:three_prime_UTR | 20.0% |
| !! | TGATAGTATTGAAACTGTTA+TGG | + | chr2_4:56399708-56399727 | Msa0336850:CDS | 25.0% |
| !! | TTACATTTTTATCACAACCA+GGG | - | chr2_4:56399765-56399784 | None:intergenic | 25.0% |
| !! | TGAATGTATCTCTATGTTTT+TGG | + | chr2_4:56399792-56399811 | Msa0336850:intron | 25.0% |
| ! | TCTTGTGTATGTTCTTATTA+TGG | + | chr2_4:56399826-56399845 | Msa0336850:intron | 25.0% |
| !!! | GATATGATTTTGTTTGAAGT+TGG | + | chr2_4:56400670-56400689 | Msa0336850:intron | 25.0% |
| ! | GAATAAAATTGATGTACTTC+AGG | + | chr2_4:56400786-56400805 | Msa0336850:intron | 25.0% |
| ! | ATAAAATTGATGTACTTCAG+GGG | + | chr2_4:56400788-56400807 | Msa0336850:intron | 25.0% |
| !!! | TATGCACTTTTATTTACTCA+TGG | + | chr2_4:56400885-56400904 | Msa0336850:intron | 25.0% |
| ! | TTTGTACAAAACTATGAAAC+GGG | + | chr2_4:56401328-56401347 | Msa0336850:intron | 25.0% |
| ! | ACTTCAAAATTCAAAGAAGA+CGG | - | chr2_4:56401457-56401476 | None:intergenic | 25.0% |
| !! | CATTTTCATCATTCTGTTTA+GGG | - | chr2_4:56401491-56401510 | None:intergenic | 25.0% |
| ! | AATTCAATTATTGCTACACA+TGG | - | chr2_4:56401561-56401580 | None:intergenic | 25.0% |
| ! | TAATGCAATGGTTATAGTTA+TGG | + | chr2_4:56402019-56402038 | Msa0336850:CDS | 25.0% |
| !!! | TTCATATTTTGATAGATTGG+AGG | + | chr2_4:56402424-56402443 | Msa0336850:intron | 25.0% |
| !!! | TCATATTTTGATAGATTGGA+GGG | + | chr2_4:56402425-56402444 | Msa0336850:intron | 25.0% |
| !! | TTTTCTATGATATGTGATTC+AGG | + | chr2_4:56402753-56402772 | Msa0336850:intron | 25.0% |
| ! | ATGTGATTCAGGAAATAATA+AGG | + | chr2_4:56402764-56402783 | Msa0336850:intron | 25.0% |
| ! | GCTCACATTCAAATATTATA+TGG | + | chr2_4:56402814-56402833 | Msa0336850:CDS | 25.0% |
| ! | TGTTAACATGATTATTCTAC+AGG | + | chr2_4:56402980-56402999 | Msa0336850:intron | 25.0% |
| ! | AGAAATACCTTAAAACTCAA+AGG | - | chr2_4:56403061-56403080 | None:intergenic | 25.0% |
| !!! | GAGTTTTAGTGAGTAATATA+TGG | + | chr2_4:56403242-56403261 | Msa0336850:intron | 25.0% |
| !! | CACTTTTCTTTAAATTTGAC+GGG | - | chr2_4:56403447-56403466 | None:intergenic | 25.0% |
| ! | TAAAAAACCAACAACAATGT+TGG | + | chr2_4:56403521-56403540 | Msa0336850:intron | 25.0% |
| ! | TTAAGCAAATAGGACATATA+TGG | + | chr2_4:56403668-56403687 | Msa0336850:intron | 25.0% |
| ! | CATATATGGATAATAACGAT+AGG | + | chr2_4:56403682-56403701 | Msa0336850:intron | 25.0% |
| !!! | AATTGAGTTCAGTTTTGTTT+TGG | - | chr2_4:56403931-56403950 | None:intergenic | 25.0% |
| ! | TATTTGTCATATTCGATTCA+TGG | + | chr2_4:56404335-56404354 | Msa0336850:intron | 25.0% |
| ! | ATTTGTCATATTCGATTCAT+GGG | + | chr2_4:56404336-56404355 | Msa0336850:intron | 25.0% |
| ! | TTTATGAATTATGGGTATAC+AGG | - | chr2_4:56404481-56404500 | None:intergenic | 25.0% |
| ! | CATAAATAACAAGGTAAGTA+TGG | - | chr2_4:56404576-56404595 | None:intergenic | 25.0% |
| !!! | CATACTTACCTTGTTATTTA+TGG | + | chr2_4:56404574-56404593 | Msa0336850:intron | 25.0% |
| !! | GTCTAAAACCATAAATAACA+AGG | - | chr2_4:56404585-56404604 | None:intergenic | 25.0% |
| ! | AGGTCAATTCATAGTAAAAA+TGG | - | chr2_4:56404983-56405002 | None:intergenic | 25.0% |
| !! | TTTTACTATGAATTGACCTT+AGG | + | chr2_4:56404984-56405003 | Msa0336850:intron | 25.0% |
| ! | TCTACTAAAAAACTAATGAC+TGG | - | chr2_4:56405114-56405133 | None:intergenic | 25.0% |
| ! | TGAACTGCAATCTTTAAATT+TGG | + | chr2_4:56405366-56405385 | Msa0336850:intron | 25.0% |
| ! | AAACAATTACTTCACAGAAT+AGG | - | chr2_4:56405745-56405764 | None:intergenic | 25.0% |
| ! | ATCTTAAGTGTAGTTTAATG+TGG | + | chr2_4:56406140-56406159 | Msa0336850:intron | 25.0% |
| !! | AAAACATAATCTTTTCTGGA+AGG | - | chr2_4:56406382-56406401 | None:intergenic | 25.0% |
| ! | AACAAATTTGGTTAGATCAA+TGG | - | chr2_4:56406634-56406653 | None:intergenic | 25.0% |
| !! | GCTTCACATTTTTAATATAC+TGG | - | chr2_4:56406669-56406688 | None:intergenic | 25.0% |
| ! | AAATAAACAAGAACAAAGAG+AGG | - | chr2_4:56406894-56406913 | None:intergenic | 25.0% |
| ! | TAACTGATACAACATTCTAT+TGG | - | chr2_4:56406925-56406944 | None:intergenic | 25.0% |
| ! | TGTATCAGTTAGTAATGAAT+AGG | + | chr2_4:56406934-56406953 | Msa0336850:three_prime_UTR | 25.0% |
| !!! | CTAGCACATAAATTGATTTT+CGG | - | chr2_4:56407022-56407041 | None:intergenic | 25.0% |
| !! | CTGTATTTGTTGAGTTTTGT+GGG | - | chr2_4:56399403-56399422 | None:intergenic | 30.0% |
| !! | ACTGTATTTGTTGAGTTTTG+TGG | - | chr2_4:56399404-56399423 | None:intergenic | 30.0% |
| CCAATAGTGTTAAACCTAAA+CGG | - | chr2_4:56399619-56399638 | None:intergenic | 30.0% | |
| !! | TGTTAGTGATGCTATTTCTA+TGG | + | chr2_4:56399639-56399658 | Msa0336850:CDS | 30.0% |
| !! | GTTAGTGATGCTATTTCTAT+GGG | + | chr2_4:56399640-56399659 | Msa0336850:CDS | 30.0% |
| !! | TTAGTGATGCTATTTCTATG+GGG | + | chr2_4:56399641-56399660 | Msa0336850:CDS | 30.0% |
| ! | CTTACATTTTTATCACAACC+AGG | - | chr2_4:56399766-56399785 | None:intergenic | 30.0% |
| !!! | ATTATGGTTTTATAGATGCC+AGG | + | chr2_4:56399842-56399861 | Msa0336850:intron | 30.0% |
| AAATTACTGAACTAATGAGC+TGG | + | chr2_4:56399953-56399972 | Msa0336850:intron | 30.0% | |
| TGGAGAATTACATGTATGTT+TGG | + | chr2_4:56400036-56400055 | Msa0336850:intron | 30.0% | |
| !!! | TACATGTATGTTTGGTTTTG+CGG | + | chr2_4:56400044-56400063 | Msa0336850:intron | 30.0% |
| ! | GTTTGACTTTAGTTATAACC+AGG | + | chr2_4:56400348-56400367 | Msa0336850:intron | 30.0% |
| !! | GCATATATTGATTTGTGTGT+AGG | + | chr2_4:56400533-56400552 | Msa0336850:intron | 30.0% |
| TGATTGATTGCTATGAAGTA+AGG | + | chr2_4:56400608-56400627 | Msa0336850:intron | 30.0% | |
| GATTGATTGCTATGAAGTAA+GGG | + | chr2_4:56400609-56400628 | Msa0336850:intron | 30.0% | |
| TTGTACAAAACTATGAAACG+GGG | + | chr2_4:56401329-56401348 | Msa0336850:intron | 30.0% | |
| TGACAATAAATACGCTTGTT+TGG | - | chr2_4:56401411-56401430 | None:intergenic | 30.0% | |
| AACAAGCGTATTTATTGTCA+AGG | + | chr2_4:56401411-56401430 | Msa0336850:intron | 30.0% | |
| ! | CCATTTTCATCATTCTGTTT+AGG | - | chr2_4:56401492-56401511 | None:intergenic | 30.0% |
| CCTAAACAGAATGATGAAAA+TGG | + | chr2_4:56401489-56401508 | Msa0336850:intron | 30.0% | |
| ATCTATGGAGAATATGTAAG+TGG | + | chr2_4:56401671-56401690 | Msa0336850:CDS | 30.0% | |
| TACACATATACTTACCTGTA+TGG | - | chr2_4:56401821-56401840 | None:intergenic | 30.0% | |
| TAAGGATAAGCACACTAAAA+TGG | - | chr2_4:56401859-56401878 | None:intergenic | 30.0% | |
| CCTGCAAAAATTATTACATG+AGG | - | chr2_4:56402149-56402168 | None:intergenic | 30.0% | |
| ! | CCTCATGTAATAATTTTTGC+AGG | + | chr2_4:56402146-56402165 | Msa0336850:intron | 30.0% |
| ! | AATAATTTTTGCAGGTCTGT+TGG | + | chr2_4:56402154-56402173 | Msa0336850:intron | 30.0% |
| TGTTATGGAAGATGTTCATA+AGG | + | chr2_4:56402258-56402277 | Msa0336850:CDS | 30.0% | |
| ATGAAAAGAAAAGGATCTTC+AGG | - | chr2_4:56402409-56402428 | None:intergenic | 30.0% | |
| ATACTGTTATCAACACACAA+AGG | - | chr2_4:56402524-56402543 | None:intergenic | 30.0% | |
| !!! | TTAGTGATGTGCATGTTTTT+TGG | - | chr2_4:56402554-56402573 | None:intergenic | 30.0% |
| ACAATCAAGCAGTTGTAATT+GGG | - | chr2_4:56402701-56402720 | None:intergenic | 30.0% | |
| AACAATCAAGCAGTTGTAAT+TGG | - | chr2_4:56402702-56402721 | None:intergenic | 30.0% | |
| ! | TTCTTGATGGGATTTTCAAT+TGG | - | chr2_4:56402790-56402809 | None:intergenic | 30.0% |
| GTTCTGTTGCTAAAATTACT+GGG | + | chr2_4:56402854-56402873 | Msa0336850:CDS | 30.0% | |
| AGTATTATGGAATGAGAAAG+TGG | + | chr2_4:56403266-56403285 | Msa0336850:intron | 30.0% | |
| GTATTATGGAATGAGAAAGT+GGG | + | chr2_4:56403267-56403286 | Msa0336850:intron | 30.0% | |
| AAAATGACATAGAGATCACT+TGG | + | chr2_4:56403307-56403326 | Msa0336850:intron | 30.0% | |
| TAAGGTGAATGTTAAACGAA+GGG | + | chr2_4:56403335-56403354 | Msa0336850:intron | 30.0% | |
| ATAAGATGGATGTTAACCAT+TGG | + | chr2_4:56403361-56403380 | Msa0336850:intron | 30.0% | |
| GTTATATACGATTAAATGCC+AGG | + | chr2_4:56403495-56403514 | Msa0336850:intron | 30.0% | |
| TATTCCAATGCTAGAAGTAA+TGG | + | chr2_4:56403812-56403831 | Msa0336850:intron | 30.0% | |
| ATTCCAATGCTAGAAGTAAT+GGG | + | chr2_4:56403813-56403832 | Msa0336850:intron | 30.0% | |
| CCAAATCATTACAAGAGATA+CGG | + | chr2_4:56403855-56403874 | Msa0336850:intron | 30.0% | |
| !!! | TTTTTTTTTGGCATAGATCG+CGG | + | chr2_4:56403968-56403987 | Msa0336850:intron | 30.0% |
| AATGTGAATCATGAGATTCA+GGG | - | chr2_4:56404030-56404049 | None:intergenic | 30.0% | |
| TTCGAAAATAAACACTCTAG+AGG | + | chr2_4:56404150-56404169 | Msa0336850:intron | 30.0% | |
| !!! | TTCAATGGTGATTTTGACTT+GGG | - | chr2_4:56404178-56404197 | None:intergenic | 30.0% |
| !!! | TTTCAATGGTGATTTTGACT+TGG | - | chr2_4:56404179-56404198 | None:intergenic | 30.0% |
| !! | AGCAGAATGTTTGTTTTCAA+TGG | - | chr2_4:56404193-56404212 | None:intergenic | 30.0% |
| TAAGTAAAGAAGAACAGAAG+AGG | - | chr2_4:56404300-56404319 | None:intergenic | 30.0% | |
| TCGAGATTCAAATCATGAAT+CGG | - | chr2_4:56404378-56404397 | None:intergenic | 30.0% | |
| TGAATCTCGATAACATGATT+TGG | + | chr2_4:56404388-56404407 | Msa0336850:intron | 30.0% | |
| TGGATTTCTACGATAAGATA+TGG | + | chr2_4:56404408-56404427 | Msa0336850:intron | 30.0% | |
| ! | TTTTGCTAAGCATGACAAAT+GGG | - | chr2_4:56404552-56404571 | None:intergenic | 30.0% |
| AATGTTTCCTTATCAAACTG+TGG | + | chr2_4:56404630-56404649 | Msa0336850:intron | 30.0% | |
| AAGAAATCAATACAGTGACA+AGG | - | chr2_4:56404717-56404736 | None:intergenic | 30.0% | |
| AAAAGGAAAATTTGATGGAG+AGG | - | chr2_4:56404793-56404812 | None:intergenic | 30.0% | |
| ! | TCCATCAAATTTTCCTTTTC+AGG | + | chr2_4:56404794-56404813 | Msa0336850:intron | 30.0% |
| ! | CCATCAAATTTTCCTTTTCA+GGG | + | chr2_4:56404795-56404814 | Msa0336850:intron | 30.0% |
| AGGGAAAAGTGGTTATAATT+AGG | + | chr2_4:56404814-56404833 | Msa0336850:intron | 30.0% | |
| GGGAAAAGTGGTTATAATTA+GGG | + | chr2_4:56404815-56404834 | Msa0336850:intron | 30.0% | |
| GGAAAAGTGGTTATAATTAG+GGG | + | chr2_4:56404816-56404835 | Msa0336850:CDS | 30.0% | |
| AGAACATCTTTCTACAAACA+TGG | - | chr2_4:56405091-56405110 | None:intergenic | 30.0% | |
| ! | GGTTTTCAAAGCTTGAAAAA+AGG | - | chr2_4:56405147-56405166 | None:intergenic | 30.0% |
| ! | TAAGAAATGTCACTTCATCA+TGG | - | chr2_4:56405168-56405187 | None:intergenic | 30.0% |
| TGATGAAGTGACATTTCTTA+AGG | + | chr2_4:56405168-56405187 | Msa0336850:intron | 30.0% | |
| TAAATTTGGTCAAATGGTGT+TGG | + | chr2_4:56405380-56405399 | Msa0336850:intron | 30.0% | |
| ! | ATGAGCAGAAGAAATTTTCT+AGG | - | chr2_4:56405504-56405523 | None:intergenic | 30.0% |
| TAGAAAATTTCTTCTGCTCA+TGG | + | chr2_4:56405503-56405522 | Msa0336850:intron | 30.0% | |
| TCTTGAAAAACAATCTATCG+TGG | + | chr2_4:56405568-56405587 | Msa0336850:intron | 30.0% | |
| GAGTGTGAACATAATCATTA+AGG | + | chr2_4:56405634-56405653 | Msa0336850:intron | 30.0% | |
| ! | TTCAAGCTATTCTTTTGTAG+TGG | + | chr2_4:56405836-56405855 | Msa0336850:intron | 30.0% |
| ! | TCAAGCTATTCTTTTGTAGT+GGG | + | chr2_4:56405837-56405856 | Msa0336850:intron | 30.0% |
| ACCAGGTGAGTTTATTATAT+TGG | + | chr2_4:56405872-56405891 | Msa0336850:intron | 30.0% | |
| ACCAATATAATAAACTCACC+TGG | - | chr2_4:56405876-56405895 | None:intergenic | 30.0% | |
| !! | TGAAGATAATGTTGCTTTAC+TGG | + | chr2_4:56405905-56405924 | Msa0336850:intron | 30.0% |
| ! | AAGTGTAAATCCAATTTTCC+TGG | - | chr2_4:56406022-56406041 | None:intergenic | 30.0% |
| ATGTATTTACTCTATCGAGA+TGG | + | chr2_4:56406106-56406125 | Msa0336850:intron | 30.0% | |
| GAAGCACGTAGAAATATTAA+TGG | - | chr2_4:56406170-56406189 | None:intergenic | 30.0% | |
| CTCATTTATCATTATCCACA+AGG | - | chr2_4:56406586-56406605 | None:intergenic | 30.0% | |
| TCAATGGAAGAATTAACTAG+AGG | - | chr2_4:56406618-56406637 | None:intergenic | 30.0% | |
| ACAAATAATCGAATTTCGCT+CGG | - | chr2_4:56406748-56406767 | None:intergenic | 30.0% | |
| !! | GTATAAGTAGCATTTTGATG+AGG | + | chr2_4:56406766-56406785 | Msa0336850:three_prime_UTR | 30.0% |
| ACAACATTCTATTGGTACAA+TGG | - | chr2_4:56406917-56406936 | None:intergenic | 30.0% | |
| TCAGTTAGTAATGAATAGGT+TGG | + | chr2_4:56406938-56406957 | Msa0336850:three_prime_UTR | 30.0% | |
| ! | ACATAGTTGAATTTTTGCCA+AGG | - | chr2_4:56406971-56406990 | None:intergenic | 30.0% |
| TTAGGAATAGGAGTAGTAGT+AGG | - | chr2_4:56399195-56399214 | None:intergenic | 35.0% | |
| !!! | GACTTGTGGCTTTTTTAAGT+CGG | - | chr2_4:56399497-56399516 | None:intergenic | 35.0% |
| GACTTAAAAAAGCCACAAGT+CGG | + | chr2_4:56399496-56399515 | Msa0336850:CDS | 35.0% | |
| AAACCTAAACGGAATCATAC+CGG | - | chr2_4:56399608-56399627 | None:intergenic | 35.0% | |
| ! | CCGTTTAGGTTTAACACTAT+TGG | + | chr2_4:56399616-56399635 | Msa0336850:CDS | 35.0% |
| CCACCATAAACCATAATACT+CGG | - | chr2_4:56399899-56399918 | None:intergenic | 35.0% | |
| CGAGTATTATGGTTTATGGT+GGG | + | chr2_4:56399897-56399916 | Msa0336850:CDS | 35.0% | |
| ! | GTCTAAACGTGATTTGTGTT+TGG | + | chr2_4:56400111-56400130 | Msa0336850:intron | 35.0% |
| TGTATGTTTGATTCCGCATT+TGG | - | chr2_4:56400320-56400339 | None:intergenic | 35.0% | |
| !! | TGACGGTGTCAATTTTTACA+CGG | + | chr2_4:56400407-56400426 | Msa0336850:intron | 35.0% |
| ! | ACCTCATATGCACTTTTCTT+TGG | + | chr2_4:56400475-56400494 | Msa0336850:intron | 35.0% |
| ! | CCTCATATGCACTTTTCTTT+GGG | + | chr2_4:56400476-56400495 | Msa0336850:intron | 35.0% |
| !! | ATATTGATTTGTGTGTAGGC+AGG | + | chr2_4:56400537-56400556 | Msa0336850:intron | 35.0% |
| !! | TATTGATTTGTGTGTAGGCA+GGG | + | chr2_4:56400538-56400557 | Msa0336850:intron | 35.0% |
| GCTATGAAGTAAGGGTTATA+TGG | + | chr2_4:56400617-56400636 | Msa0336850:intron | 35.0% | |
| ATACATATCATCCACACAAG+TGG | - | chr2_4:56400712-56400731 | None:intergenic | 35.0% | |
| TACATCATGAGTAAAGGTGA+TGG | - | chr2_4:56400845-56400864 | None:intergenic | 35.0% | |
| GTGCATAAATGTCACATGAA+AGG | - | chr2_4:56400872-56400891 | None:intergenic | 35.0% | |
| TAACAACCAGGATTGGAAAT+TGG | - | chr2_4:56400942-56400961 | None:intergenic | 35.0% | |
| TGAAGATTAACAACCAGGAT+TGG | - | chr2_4:56400949-56400968 | None:intergenic | 35.0% | |
| CAGAATGAAGATTAACAACC+AGG | - | chr2_4:56400954-56400973 | None:intergenic | 35.0% | |
| !!! | TTCTGTTATTTTTTCCAGCC+TGG | + | chr2_4:56400969-56400988 | Msa0336850:intron | 35.0% |
| TTCATTAACTGTGAAGAGCT+AGG | - | chr2_4:56401190-56401209 | None:intergenic | 35.0% | |
| ! | GAGAACTTTTAACGCTTGTT+TGG | + | chr2_4:56401247-56401266 | Msa0336850:intron | 35.0% |
| AATGTATACAGCCAATACCA+TGG | + | chr2_4:56401763-56401782 | Msa0336850:CDS | 35.0% | |
| GCTACAGAAAACAACACATA+AGG | - | chr2_4:56401877-56401896 | None:intergenic | 35.0% | |
| GTTAGCTGGTAAATATCTTC+TGG | + | chr2_4:56401941-56401960 | Msa0336850:CDS | 35.0% | |
| !! | TCTTCTGGAGTTATTGAAGA+TGG | + | chr2_4:56401956-56401975 | Msa0336850:CDS | 35.0% |
| ATTTGCGAGTGATGATATCT+CGG | - | chr2_4:56401992-56402011 | None:intergenic | 35.0% | |
| CAAATCACTACGTAATGCAA+TGG | + | chr2_4:56402007-56402026 | Msa0336850:CDS | 35.0% | |
| ATGGTTATAGTTATGGCACT+TGG | + | chr2_4:56402026-56402045 | Msa0336850:CDS | 35.0% | |
| TGGTTATAGTTATGGCACTT+GGG | + | chr2_4:56402027-56402046 | Msa0336850:CDS | 35.0% | |
| AATTAAGTGCAACACAGCAT+TGG | - | chr2_4:56402060-56402079 | None:intergenic | 35.0% | |
| ! | GACTCTAGATGATTTTCAGA+AGG | + | chr2_4:56402186-56402205 | Msa0336850:CDS | 35.0% |
| ! | GGTTTAAGATCAGCAATGAA+AGG | - | chr2_4:56402226-56402245 | None:intergenic | 35.0% |
| ATTGCTGATCTTAAACCAAG+TGG | + | chr2_4:56402229-56402248 | Msa0336850:CDS | 35.0% | |
| TTGCTGATCTTAAACCAAGT+GGG | + | chr2_4:56402230-56402249 | Msa0336850:CDS | 35.0% | |
| ACCAAGTGGGAAATATGTTA+TGG | + | chr2_4:56402243-56402262 | Msa0336850:CDS | 35.0% | |
| TCCATAACATATTTCCCACT+TGG | - | chr2_4:56402247-56402266 | None:intergenic | 35.0% | |
| ! | ATTTTTGCTGGTCATGCTTT+CGG | + | chr2_4:56402348-56402367 | Msa0336850:intron | 35.0% |
| ! | AAGTTCTGCATTTTCAGCTA+GGG | - | chr2_4:56402611-56402630 | None:intergenic | 35.0% |
| ! | AAAGTTCTGCATTTTCAGCT+AGG | - | chr2_4:56402612-56402631 | None:intergenic | 35.0% |
| !! | CTTGTTGTTTCTGTTCCATA+TGG | + | chr2_4:56402662-56402681 | Msa0336850:intron | 35.0% |
| CAATCAAGCAGTTGTAATTG+GGG | - | chr2_4:56402700-56402719 | None:intergenic | 35.0% | |
| GGTTCTGTTGCTAAAATTAC+TGG | + | chr2_4:56402853-56402872 | Msa0336850:CDS | 35.0% | |
| TGCTAAAATTACTGGGAAAG+AGG | + | chr2_4:56402861-56402880 | Msa0336850:CDS | 35.0% | |
| GCTAAAATTACTGGGAAAGA+GGG | + | chr2_4:56402862-56402881 | Msa0336850:CDS | 35.0% | |
| !!! | ACCTTCTTATGCTGTTTTCT+TGG | + | chr2_4:56402903-56402922 | Msa0336850:intron | 35.0% |
| TCCAAGAAAACAGCATAAGA+AGG | - | chr2_4:56402907-56402926 | None:intergenic | 35.0% | |
| !! | AGAGGATCCTTTGAGTTTTA+AGG | + | chr2_4:56403051-56403070 | Msa0336850:CDS | 35.0% |
| TACTGTCAAGAGATTCAAGA+CGG | + | chr2_4:56403107-56403126 | Msa0336850:intron | 35.0% | |
| AGAGATCACTTGGTATAGTA+AGG | + | chr2_4:56403317-56403336 | Msa0336850:intron | 35.0% | |
| GTAAGGTGAATGTTAAACGA+AGG | + | chr2_4:56403334-56403353 | Msa0336850:intron | 35.0% | |
| AAGGTGAATGTTAAACGAAG+GGG | + | chr2_4:56403336-56403355 | Msa0336850:intron | 35.0% | |
| GGCTATAAATTGTGCTTGAA+AGG | + | chr2_4:56403419-56403438 | Msa0336850:intron | 35.0% | |
| ATATACGATTAAATGCCAGG+TGG | + | chr2_4:56403498-56403517 | Msa0336850:intron | 35.0% | |
| TGCAAATCCAACATTGTTGT+TGG | - | chr2_4:56403531-56403550 | None:intergenic | 35.0% | |
| AGACACTGCTATCTTACAAT+TGG | - | chr2_4:56403644-56403663 | None:intergenic | 35.0% | |
| GTGTCTTGTCTTAAGCAAAT+AGG | + | chr2_4:56403658-56403677 | Msa0336850:intron | 35.0% | |
| GATAATAACGATAGGTCACA+AGG | + | chr2_4:56403690-56403709 | Msa0336850:intron | 35.0% | |
| !! | TAGAAGTATTGGGACATGTA+TGG | + | chr2_4:56403743-56403762 | Msa0336850:intron | 35.0% |
| CATGTATGGAGAATAACCAT+AGG | + | chr2_4:56403757-56403776 | Msa0336850:intron | 35.0% | |
| ATAACCATAGGAACATCACA+AGG | + | chr2_4:56403769-56403788 | Msa0336850:intron | 35.0% | |
| CCGTATCTCTTGTAATGATT+TGG | - | chr2_4:56403858-56403877 | None:intergenic | 35.0% | |
| ATGTGAATCATGAGATTCAG+GGG | - | chr2_4:56404029-56404048 | None:intergenic | 35.0% | |
| GAATGTGAATCATGAGATTC+AGG | - | chr2_4:56404031-56404050 | None:intergenic | 35.0% | |
| !! | CTGGTTTCTAAAATGCCAAA+GGG | + | chr2_4:56404091-56404110 | Msa0336850:intron | 35.0% |
| AGAATGCAAAAACAACCCTT+TGG | - | chr2_4:56404109-56404128 | None:intergenic | 35.0% | |
| TGAAAACAAACATTCTGCTG+CGG | + | chr2_4:56404194-56404213 | Msa0336850:intron | 35.0% | |
| ATAAGATATGGTTCATTGCC+TGG | + | chr2_4:56404420-56404439 | Msa0336850:intron | 35.0% | |
| TAAGATATGGTTCATTGCCT+GGG | + | chr2_4:56404421-56404440 | Msa0336850:intron | 35.0% | |
| !! | GCAAAAGTACTTGTACACAT+GGG | + | chr2_4:56404447-56404466 | Msa0336850:intron | 35.0% |
| AGCATGACAAATGGGATAAA+GGG | - | chr2_4:56404544-56404563 | None:intergenic | 35.0% | |
| AAGCATGACAAATGGGATAA+AGG | - | chr2_4:56404545-56404564 | None:intergenic | 35.0% | |
| ! | GTTTTGCTAAGCATGACAAA+TGG | - | chr2_4:56404553-56404572 | None:intergenic | 35.0% |
| AGAAACTCCACAGTTTGATA+AGG | - | chr2_4:56404640-56404659 | None:intergenic | 35.0% | |
| ACAGATATAACCGCAGTAAA+TGG | + | chr2_4:56404741-56404760 | Msa0336850:intron | 35.0% | |
| ! | CATTTAGTTGCCATTTACTG+CGG | - | chr2_4:56404754-56404773 | None:intergenic | 35.0% |
| CCCTGAAAAGGAAAATTTGA+TGG | - | chr2_4:56404798-56404817 | None:intergenic | 35.0% | |
| !! | TTTTCCTTTTCAGGGAAAAG+TGG | + | chr2_4:56404803-56404822 | Msa0336850:intron | 35.0% |
| !! | ATAACCACTTTTCCCTGAAA+AGG | - | chr2_4:56404810-56404829 | None:intergenic | 35.0% |
| AACACCAACAAGTGCAATAA+TGG | + | chr2_4:56404878-56404897 | Msa0336850:CDS | 35.0% | |
| ACACCAACAAGTGCAATAAT+GGG | + | chr2_4:56404879-56404898 | Msa0336850:CDS | 35.0% | |
| TCAAGAACAAGCAGCTATTT+AGG | - | chr2_4:56405594-56405613 | None:intergenic | 35.0% | |
| GAATTCCTTAGCAATGATGT+TGG | + | chr2_4:56405612-56405631 | Msa0336850:intron | 35.0% | |
| ATGCACAACACATTGTTCTA+AGG | - | chr2_4:56405708-56405727 | None:intergenic | 35.0% | |
| TTAATGCATTCAAGTGCACT+TGG | - | chr2_4:56405814-56405833 | None:intergenic | 35.0% | |
| TAGAAAAAGGAATATACCGG+AGG | + | chr2_4:56405971-56405990 | Msa0336850:intron | 35.0% | |
| GAAAAGTTCTCCAGGAAAAT+TGG | + | chr2_4:56406009-56406028 | Msa0336850:intron | 35.0% | |
| TACACTTCACTATGTTGAAG+AGG | + | chr2_4:56406035-56406054 | Msa0336850:intron | 35.0% | |
| ACGTGCTTCTTTGATTGTAT+AGG | + | chr2_4:56406181-56406200 | Msa0336850:intron | 35.0% | |
| GCTTCTTTGATTGTATAGGA+AGG | + | chr2_4:56406185-56406204 | Msa0336850:intron | 35.0% | |
| TCTTTGATTGTATAGGAAGG+CGG | + | chr2_4:56406188-56406207 | Msa0336850:intron | 35.0% | |
| ! | CCATTTTGAACCAAACCAAT+TGG | - | chr2_4:56406215-56406234 | None:intergenic | 35.0% |
| !! | CCAATTGGTTTGGTTCAAAA+TGG | + | chr2_4:56406212-56406231 | Msa0336850:CDS | 35.0% |
| !!! | CGATGTTTTAGTTTCAGATG+AGG | + | chr2_4:56406271-56406290 | Msa0336850:CDS | 35.0% |
| ! | TTTAGTTTCAGATGAGGAGA+TGG | + | chr2_4:56406277-56406296 | Msa0336850:CDS | 35.0% |
| !! | ACTCCTTGATTAGCTTTGTA+TGG | - | chr2_4:56406332-56406351 | None:intergenic | 35.0% |
| TAATCAAGGAGTTCTGTACA+AGG | + | chr2_4:56406340-56406359 | Msa0336850:CDS | 35.0% | |
| !! | ACATAATCTTTTCTGGAAGG+AGG | - | chr2_4:56406379-56406398 | None:intergenic | 35.0% |
| TGAGAATGGATCTTCTTTAG+CGG | + | chr2_4:56406413-56406432 | Msa0336850:intron | 35.0% | |
| TAATTCAAAGGCTCTGCAAT+AGG | + | chr2_4:56406506-56406525 | Msa0336850:intron | 35.0% | |
| ! | GAGTAGAGAGGACATATTTT+TGG | + | chr2_4:56406715-56406734 | Msa0336850:exon | 35.0% |
| !!! | TAGAGAGGACATATTTTTGG+TGG | + | chr2_4:56406718-56406737 | Msa0336850:exon | 35.0% |
| CAAGATGCATATAAATGCAC+CGG | - | chr2_4:56406811-56406830 | None:intergenic | 35.0% | |
| TAAACAAGAACAAAGAGAGG+AGG | - | chr2_4:56406891-56406910 | None:intergenic | 35.0% | |
| ! | AATAGGTTGGATTGATTCCT+TGG | + | chr2_4:56406951-56406970 | Msa0336850:three_prime_UTR | 35.0% |
| AGTAGGTAGTGAGTGTAAGA+AGG | - | chr2_4:56399178-56399197 | None:intergenic | 40.0% | |
| ! | CGGAAAATGGGTTTAGGAAT+AGG | - | chr2_4:56399207-56399226 | None:intergenic | 40.0% |
| AAGAGAGTTGACTGCATTGT+TGG | - | chr2_4:56399280-56399299 | None:intergenic | 40.0% | |
| ! | GGTTGAGATGGAGGATTTTA+CGG | - | chr2_4:56399362-56399381 | None:intergenic | 40.0% |
| !!! | TGGCTTTTTTAAGTCGGCAT+CGG | - | chr2_4:56399491-56399510 | None:intergenic | 40.0% |
| CAAACTATAACACATCCCTC+TGG | - | chr2_4:56399668-56399687 | None:intergenic | 40.0% | |
| CCAGGTACGATTATTGCAAT+GGG | + | chr2_4:56399860-56399879 | Msa0336850:CDS | 40.0% | |
| GTACGATTATTGCAATGGGA+CGG | + | chr2_4:56399864-56399883 | Msa0336850:CDS | 40.0% | |
| CCGAGTATTATGGTTTATGG+TGG | + | chr2_4:56399896-56399915 | Msa0336850:CDS | 40.0% | |
| ! | GGTTTATGGTGGGACTATTA+AGG | + | chr2_4:56399907-56399926 | Msa0336850:CDS | 40.0% |
| ! | ATGGTGGGACTATTAAGGTA+TGG | + | chr2_4:56399912-56399931 | Msa0336850:intron | 40.0% |
| ! | TACACCGCTACAATCAGTTT+TGG | + | chr2_4:56400289-56400308 | Msa0336850:intron | 40.0% |
| GAAGCCAAAACTGATTGTAG+CGG | - | chr2_4:56400296-56400315 | None:intergenic | 40.0% | |
| !!! | AGTTTTGGCTTCTCCAAATG+CGG | + | chr2_4:56400304-56400323 | Msa0336850:intron | 40.0% |
| TACATGTGTGACTTTAGACC+TGG | - | chr2_4:56400369-56400388 | None:intergenic | 40.0% | |
| ! | GATTGACTTTGATCTGCTGA+CGG | + | chr2_4:56400390-56400409 | Msa0336850:intron | 40.0% |
| ! | CCCAAAGAAAAGTGCATATG+AGG | - | chr2_4:56400479-56400498 | None:intergenic | 40.0% |
| !! | TATGCACTTTTCTTTGGGAG+TGG | + | chr2_4:56400481-56400500 | Msa0336850:intron | 40.0% |
| CGATAATTGTACCACTTGTG+TGG | + | chr2_4:56400698-56400717 | Msa0336850:intron | 40.0% | |
| GATGTACTTCAGGGGATATT+TGG | + | chr2_4:56400796-56400815 | Msa0336850:intron | 40.0% | |
| GGCACATACATCATGAGTAA+AGG | - | chr2_4:56400851-56400870 | None:intergenic | 40.0% | |
| GTGTTTCCAATTTCCAATCC+TGG | + | chr2_4:56400933-56400952 | Msa0336850:intron | 40.0% | |
| !! | TTGGTTTTCCTGCAGATCTA+TGG | + | chr2_4:56401656-56401675 | Msa0336850:intron | 40.0% |
| CATATTCTCCATAGATCTGC+AGG | - | chr2_4:56401667-56401686 | None:intergenic | 40.0% | |
| TTGTCTGTGCTCATCACTAA+TGG | - | chr2_4:56401699-56401718 | None:intergenic | 40.0% | |
| TATTGCAGAAGCCATGGTAT+TGG | - | chr2_4:56401777-56401796 | None:intergenic | 40.0% | |
| GCTTCTGCAATAGAAGCTAT+GGG | + | chr2_4:56401785-56401804 | Msa0336850:CDS | 40.0% | |
| CACTAAAGTTGGATGAGTGT+CGG | + | chr2_4:56401919-56401938 | Msa0336850:CDS | 40.0% | |
| TTTGCGAGTGATGATATCTC+GGG | - | chr2_4:56401991-56402010 | None:intergenic | 40.0% | |
| GGTTATAGTTATGGCACTTG+GGG | + | chr2_4:56402028-56402047 | Msa0336850:CDS | 40.0% | |
| GTTATAGTTATGGCACTTGG+GGG | + | chr2_4:56402029-56402048 | Msa0336850:CDS | 40.0% | |
| TTAGATGGTGACTGTATGAC+TGG | + | chr2_4:56402487-56402506 | Msa0336850:CDS | 40.0% | |
| TATTTCTCCTCTCTAGTCAC+TGG | + | chr2_4:56402580-56402599 | Msa0336850:intron | 40.0% | |
| GGGAGTCTTACATAACCATA+TGG | - | chr2_4:56402680-56402699 | None:intergenic | 40.0% | |
| ATGTGAGCTGTCTTCTTGAT+GGG | - | chr2_4:56402802-56402821 | None:intergenic | 40.0% | |
| AATGTGAGCTGTCTTCTTGA+TGG | - | chr2_4:56402803-56402822 | None:intergenic | 40.0% | |
| !! | ATTTTAGCAACAGAACCCTG+TGG | - | chr2_4:56402850-56402869 | None:intergenic | 40.0% |
| TCTCCTTCAAAAACAAGTGC+GGG | - | chr2_4:56403007-56403026 | None:intergenic | 40.0% | |
| CTCTCCTTCAAAAACAAGTG+CGG | - | chr2_4:56403008-56403027 | None:intergenic | 40.0% | |
| !!! | ACTTGTTTTTGAAGGAGAGG+AGG | + | chr2_4:56403009-56403028 | Msa0336850:CDS | 40.0% |
| ! | AATGATTGCTGCCATTTCAG+AGG | + | chr2_4:56403033-56403052 | Msa0336850:CDS | 40.0% |
| ! | ACTCAAAGGATCCTCTGAAA+TGG | - | chr2_4:56403047-56403066 | None:intergenic | 40.0% |
| TATGGAATGAGAAAGTGGGT+TGG | + | chr2_4:56403271-56403290 | Msa0336850:intron | 40.0% | |
| ! | ATGGAATGAGAAAGTGGGTT+GGG | + | chr2_4:56403272-56403291 | Msa0336850:intron | 40.0% |
| TAAACGAAGGGGAGATAAGA+TGG | + | chr2_4:56403347-56403366 | Msa0336850:intron | 40.0% | |
| GTTAACCATTGGATCCAAGT+AGG | + | chr2_4:56403372-56403391 | Msa0336850:intron | 40.0% | |
| TCCAAGTAGGATGGATGAAA+TGG | + | chr2_4:56403385-56403404 | Msa0336850:intron | 40.0% | |
| CCAAGTAGGATGGATGAAAT+GGG | + | chr2_4:56403386-56403405 | Msa0336850:intron | 40.0% | |
| CAAGTAGGATGGATGAAATG+GGG | + | chr2_4:56403387-56403406 | Msa0336850:intron | 40.0% | |
| AAGTAGGATGGATGAAATGG+GGG | + | chr2_4:56403388-56403407 | Msa0336850:intron | 40.0% | |
| !!! | GTTGTTGGTTTTTTACCACC+TGG | - | chr2_4:56403516-56403535 | None:intergenic | 40.0% |
| AGAATGCTGTGATAGATGAG+TGG | + | chr2_4:56403562-56403581 | Msa0336850:intron | 40.0% | |
| GAATGCTGTGATAGATGAGT+GGG | + | chr2_4:56403563-56403582 | Msa0336850:intron | 40.0% | |
| CACCAAAAGTAGATGGGATT+GGG | + | chr2_4:56403586-56403605 | Msa0336850:intron | 40.0% | |
| ! | TTCCCAATCCCATCTACTTT+TGG | - | chr2_4:56403591-56403610 | None:intergenic | 40.0% |
| GGGATTGGGAATGAAATCAT+TGG | + | chr2_4:56403600-56403619 | Msa0336850:intron | 40.0% | |
| AATAACGATAGGTCACAAGG+TGG | + | chr2_4:56403693-56403712 | Msa0336850:intron | 40.0% | |
| ATAACGATAGGTCACAAGGT+GGG | + | chr2_4:56403694-56403713 | Msa0336850:intron | 40.0% | |
| !! | AGTCCAGAGCTAGAAGTATT+GGG | + | chr2_4:56403733-56403752 | Msa0336850:intron | 40.0% |
| TCTCCCATTACTTCTAGCAT+TGG | - | chr2_4:56403819-56403838 | None:intergenic | 40.0% | |
| ! | CTAGAAGTAATGGGAGACTA+AGG | + | chr2_4:56403822-56403841 | Msa0336850:intron | 40.0% |
| ATTACAAGAGATACGGAGCA+TGG | + | chr2_4:56403862-56403881 | Msa0336850:intron | 40.0% | |
| GACTCATTCACATGTATCGT+GGG | - | chr2_4:56403898-56403917 | None:intergenic | 40.0% | |
| TCATGATTCACATTCTGCTG+CGG | + | chr2_4:56404036-56404055 | Msa0336850:intron | 40.0% | |
| !! | CCTTTGGCATTTTAGAAACC+AGG | - | chr2_4:56404093-56404112 | None:intergenic | 40.0% |
| !! | CCTGGTTTCTAAAATGCCAA+AGG | + | chr2_4:56404090-56404109 | Msa0336850:intron | 40.0% |
| GAAAACAAACATTCTGCTGC+GGG | + | chr2_4:56404195-56404214 | Msa0336850:intron | 40.0% | |
| AAAAAAGACGCACAGTAGGA+AGG | - | chr2_4:56404243-56404262 | None:intergenic | 40.0% | |
| ATGGAAAAAAGACGCACAGT+AGG | - | chr2_4:56404247-56404266 | None:intergenic | 40.0% | |
| AAAACACTATGTAGGCAGGA+TGG | - | chr2_4:56404266-56404285 | None:intergenic | 40.0% | |
| !! | GGCAAAAGTACTTGTACACA+TGG | + | chr2_4:56404446-56404465 | Msa0336850:intron | 40.0% |
| ACAGTGACAAGGATGTGAAA+TGG | - | chr2_4:56404706-56404725 | None:intergenic | 40.0% | |
| AGTGGTTATAATTAGGGGAG+AGG | + | chr2_4:56404821-56404840 | Msa0336850:CDS | 40.0% | |
| GTGGTTATAATTAGGGGAGA+GGG | + | chr2_4:56404822-56404841 | Msa0336850:CDS | 40.0% | |
| TGGTTATAATTAGGGGAGAG+GGG | + | chr2_4:56404823-56404842 | Msa0336850:CDS | 40.0% | |
| !! | CTTGTTGGTGTTAACATCTC+AGG | - | chr2_4:56404870-56404889 | None:intergenic | 40.0% |
| GTCAATAAAGCAACATCCTG+CGG | - | chr2_4:56405210-56405229 | None:intergenic | 40.0% | |
| !! | GATGTTGCTTTATTGACCGA+CGG | + | chr2_4:56405213-56405232 | Msa0336850:CDS | 40.0% |
| TTTCATAGAACCAGCTGCTT+TGG | + | chr2_4:56405544-56405563 | Msa0336850:intron | 40.0% | |
| !! | TTTTCAAGAACCAAAGCAGC+TGG | - | chr2_4:56405557-56405576 | None:intergenic | 40.0% |
| ACACTCCAACATCATTGCTA+AGG | - | chr2_4:56405620-56405639 | None:intergenic | 40.0% | |
| ! | CTGGAGAACTTTTCAGTTCT+TGG | - | chr2_4:56406003-56406022 | None:intergenic | 40.0% |
| CAAGAACTGAAAAGTTCTCC+AGG | + | chr2_4:56406001-56406020 | Msa0336850:intron | 40.0% | |
| ACTCTATCGAGATGGAGATT+AGG | + | chr2_4:56406114-56406133 | Msa0336850:intron | 40.0% | |
| !! | CCTTGATTAGCTTTGTATGG+TGG | - | chr2_4:56406329-56406348 | None:intergenic | 40.0% |
| CCACCATACAAAGCTAATCA+AGG | + | chr2_4:56406326-56406345 | Msa0336850:CDS | 40.0% | |
| !! | TCTTTTCTGGAAGGAGGTTT+TGG | - | chr2_4:56406373-56406392 | None:intergenic | 40.0% |
| GATCTTCTTTAGCGGTTACA+TGG | + | chr2_4:56406421-56406440 | Msa0336850:intron | 40.0% | |
| TTAATTCAACAGCACTGCAG+CGG | - | chr2_4:56406453-56406472 | None:intergenic | 40.0% | |
| AATCTTCTGTTGCTGTCACA+TGG | - | chr2_4:56406537-56406556 | None:intergenic | 40.0% | |
| !!! | TATTGCTGTTTTCGCTCAAC+CGG | + | chr2_4:56406789-56406808 | Msa0336850:three_prime_UTR | 40.0% |
| AGAGTTGACTGCATTGTTGG+TGG | - | chr2_4:56399277-56399296 | None:intergenic | 45.0% | |
| ! | GTTTTGTGGGTTCAGTGGAA+GGG | - | chr2_4:56399390-56399409 | None:intergenic | 45.0% |
| !! | AGTTTTGTGGGTTCAGTGGA+AGG | - | chr2_4:56399391-56399410 | None:intergenic | 45.0% |
| !! | GTTGAGTTTTGTGGGTTCAG+TGG | - | chr2_4:56399395-56399414 | None:intergenic | 45.0% |
| !!! | GGATTTTGGTTCGGTGATTC+GGG | - | chr2_4:56399428-56399447 | None:intergenic | 45.0% |
| !!! | GGGATTTTGGTTCGGTGATT+CGG | - | chr2_4:56399429-56399448 | None:intergenic | 45.0% |
| ATCACCGAACCAAAATCCCA+AGG | + | chr2_4:56399430-56399449 | Msa0336850:CDS | 45.0% | |
| GCATCACAAGCAATCCTCTA+CGG | + | chr2_4:56399454-56399473 | Msa0336850:CDS | 45.0% | |
| !!! | TTTTTAAGTCGGCATCGGAG+AGG | - | chr2_4:56399486-56399505 | None:intergenic | 45.0% |
| ATGGAGGAGATGCATATTGC+AGG | - | chr2_4:56399551-56399570 | None:intergenic | 45.0% | |
| CTTTAACAGCTTCGGAGAGA+TGG | - | chr2_4:56399570-56399589 | None:intergenic | 45.0% | |
| CTCTCCGAAGCTGTTAAAGA+AGG | + | chr2_4:56399571-56399590 | Msa0336850:CDS | 45.0% | |
| GACGCCTTCTTTAACAGCTT+CGG | - | chr2_4:56399578-56399597 | None:intergenic | 45.0% | |
| !! | AAACGGAATCATACCGGCTT+CGG | - | chr2_4:56399602-56399621 | None:intergenic | 45.0% |
| AAGCCGGTATGATTCCGTTT+AGG | + | chr2_4:56399602-56399621 | Msa0336850:CDS | 45.0% | |
| !! | CTATTTCTATGGGGACCAGA+GGG | + | chr2_4:56399650-56399669 | Msa0336850:CDS | 45.0% |
| AAACTGTTATGGCTGCTCAG+TGG | + | chr2_4:56399719-56399738 | Msa0336850:CDS | 45.0% | |
| GATGGGAATATCTCTATCCC+TGG | + | chr2_4:56399745-56399764 | Msa0336850:CDS | 45.0% | |
| GCCAGGTACGATTATTGCAA+TGG | + | chr2_4:56399859-56399878 | Msa0336850:CDS | 45.0% | |
| CCCATTGCAATAATCGTACC+TGG | - | chr2_4:56399863-56399882 | None:intergenic | 45.0% | |
| TTGCAATGGGACGGCTTAAT+CGG | + | chr2_4:56399873-56399892 | Msa0336850:CDS | 45.0% | |
| GCTTAATCGGCCGAGTATTA+TGG | + | chr2_4:56399886-56399905 | Msa0336850:CDS | 45.0% | |
| CGGCCGAGTATTATGGTTTA+TGG | + | chr2_4:56399893-56399912 | Msa0336850:CDS | 45.0% | |
| GCTTCAAGTAGGATCAGTTG+TGG | + | chr2_4:56400212-56400231 | Msa0336850:intron | 45.0% | |
| TCAAGTAGGATCAGTTGTGG+AGG | + | chr2_4:56400215-56400234 | Msa0336850:intron | 45.0% | |
| AAGGGTTTCTCGTACCTGAA+AGG | - | chr2_4:56401030-56401049 | None:intergenic | 45.0% | |
| CACAGTAACAGATGCGACAA+GGG | - | chr2_4:56401048-56401067 | None:intergenic | 45.0% | |
| ACTATGAAACGGGGTCACAA+AGG | + | chr2_4:56401338-56401357 | Msa0336850:intron | 45.0% | |
| CTATGAAACGGGGTCACAAA+GGG | + | chr2_4:56401339-56401358 | Msa0336850:intron | 45.0% | |
| GAAGACGGTGCAAGAACAAA+AGG | - | chr2_4:56401442-56401461 | None:intergenic | 45.0% | |
| AGCTTCTATTGCAGAAGCCA+TGG | - | chr2_4:56401783-56401802 | None:intergenic | 45.0% | |
| GGCTTCTGCAATAGAAGCTA+TGG | + | chr2_4:56401784-56401803 | Msa0336850:CDS | 45.0% | |
| TGGGAATGTCTCTTCCATAC+AGG | + | chr2_4:56401804-56401823 | Msa0336850:CDS | 45.0% | |
| ! | ACTTTAGTGGATCCTCAGCA+GGG | - | chr2_4:56401908-56401927 | None:intergenic | 45.0% |
| ! | AACTTTAGTGGATCCTCAGC+AGG | - | chr2_4:56401909-56401928 | None:intergenic | 45.0% |
| TGCTGAGGATCCACTAAAGT+TGG | + | chr2_4:56401908-56401927 | Msa0336850:CDS | 45.0% | |
| CGACACTCATCCAACTTTAG+TGG | - | chr2_4:56401921-56401940 | None:intergenic | 45.0% | |
| TTGCGAGTGATGATATCTCG+GGG | - | chr2_4:56401990-56402009 | None:intergenic | 45.0% | |
| CTAAAAAGCCCTGCTCAAGA+AGG | - | chr2_4:56402471-56402490 | None:intergenic | 45.0% | |
| ! | CTTGAGCAGGGCTTTTTAGA+TGG | + | chr2_4:56402472-56402491 | Msa0336850:CDS | 45.0% |
| ! | TTTTCCCTCCTTTGTCCGAA+GGG | + | chr2_4:56402629-56402648 | Msa0336850:CDS | 45.0% |
| AAAGAGGGCTTGTACTTCTC+TGG | + | chr2_4:56402877-56402896 | Msa0336850:CDS | 45.0% | |
| !!! | CGCACTTGTTTTTGAAGGAG+AGG | + | chr2_4:56403006-56403025 | Msa0336850:CDS | 45.0% |
| ACCATTGGATCCAAGTAGGA+TGG | + | chr2_4:56403376-56403395 | Msa0336850:intron | 45.0% | |
| TCCATCCTACTTGGATCCAA+TGG | - | chr2_4:56403380-56403399 | None:intergenic | 45.0% | |
| CCCATTTCATCCATCCTACT+TGG | - | chr2_4:56403389-56403408 | None:intergenic | 45.0% | |
| GATGAAATGGGGGATTGCTT+CGG | + | chr2_4:56403398-56403417 | Msa0336850:intron | 45.0% | |
| AGTGGGCACCAAAAGTAGAT+GGG | + | chr2_4:56403580-56403599 | Msa0336850:intron | 45.0% | |
| GCACCAAAAGTAGATGGGAT+TGG | + | chr2_4:56403585-56403604 | Msa0336850:intron | 45.0% | |
| ! | CAGTCCAGAGCTAGAAGTAT+TGG | + | chr2_4:56403732-56403751 | Msa0336850:intron | 45.0% |
| !! | TGTCCCAATACTTCTAGCTC+TGG | - | chr2_4:56403739-56403758 | None:intergenic | 45.0% |
| ACCATAGGAACATCACAAGG+AGG | + | chr2_4:56403772-56403791 | Msa0336850:intron | 45.0% | |
| TCCTCCTTGTGATGTTCCTA+TGG | - | chr2_4:56403776-56403795 | None:intergenic | 45.0% | |
| CGACTCATTCACATGTATCG+TGG | - | chr2_4:56403899-56403918 | None:intergenic | 45.0% | |
| ATGAGATTCAGGGGAAGTTG+TGG | - | chr2_4:56404020-56404039 | None:intergenic | 45.0% | |
| CATGATTCACATTCTGCTGC+GGG | + | chr2_4:56404037-56404056 | Msa0336850:intron | 45.0% | |
| GAAACCAGGTCAACTTACCA+TGG | - | chr2_4:56404079-56404098 | None:intergenic | 45.0% | |
| GAGCAAAACACTATGTAGGC+AGG | - | chr2_4:56404270-56404289 | None:intergenic | 45.0% | |
| GAGGGAGCAAAACACTATGT+AGG | - | chr2_4:56404274-56404293 | None:intergenic | 45.0% | |
| GAAGAACAGAAGAGGAGAGA+GGG | - | chr2_4:56404292-56404311 | None:intergenic | 45.0% | |
| AGAAGAACAGAAGAGGAGAG+AGG | - | chr2_4:56404293-56404312 | None:intergenic | 45.0% | |
| ATATGGTTCATTGCCTGGGA+TGG | + | chr2_4:56404425-56404444 | Msa0336850:intron | 45.0% | |
| ! | ACAAGTACTTTTGCCATCCC+AGG | - | chr2_4:56404441-56404460 | None:intergenic | 45.0% |
| GTTAACATCTCAGGCATTCC+CGG | - | chr2_4:56404861-56404880 | None:intergenic | 45.0% | |
| GCTCCCATTATTGCACTTGT+TGG | - | chr2_4:56404885-56404904 | None:intergenic | 45.0% | |
| ! | ACAAGTGCAATAATGGGAGC+AGG | + | chr2_4:56404885-56404904 | Msa0336850:CDS | 45.0% |
| ! | CAAGTGCAATAATGGGAGCA+GGG | + | chr2_4:56404886-56404905 | Msa0336850:CDS | 45.0% |
| ATATTGTCTTTCGATGCCGC+AGG | + | chr2_4:56405191-56405210 | Msa0336850:intron | 45.0% | |
| ! | TTGACCGACGGAAGATTTTC+AGG | + | chr2_4:56405225-56405244 | Msa0336850:CDS | 45.0% |
| !! | AGATTTTCAGGAGGCTCACA+TGG | + | chr2_4:56405237-56405256 | Msa0336850:CDS | 45.0% |
| !! | GATTTTCAGGAGGCTCACAT+GGG | + | chr2_4:56405238-56405257 | Msa0336850:CDS | 45.0% |
| TGGTCAATTCACCTGTGCTT+CGG | - | chr2_4:56405286-56405305 | None:intergenic | 45.0% | |
| ! | CAGTTCTTGGTTAGTTCCTC+CGG | - | chr2_4:56405990-56406009 | None:intergenic | 45.0% |
| AGTTTCAGATGAGGAGATGG+AGG | + | chr2_4:56406280-56406299 | Msa0336850:CDS | 45.0% | |
| AATGTGAAGCCTGCTTCAAG+CGG | + | chr2_4:56406679-56406698 | Msa0336850:CDS | 45.0% | |
| TGTGTAACAGACGAGTAGAG+AGG | + | chr2_4:56406703-56406722 | Msa0336850:exon | 45.0% | |
| ACAAGAACAAAGAGAGGAGG+TGG | - | chr2_4:56406888-56406907 | None:intergenic | 45.0% | |
| !!! | TTTTAAAAAAAATTTACATA+AGG | + | chr2_4:56405431-56405450 | Msa0336850:intron | 5.0% |
| ! | TGAGCGCGGAAAATGGGTTT+AGG | - | chr2_4:56399213-56399232 | None:intergenic | 50.0% |
| TTGGAGTGAGCGCGGAAAAT+GGG | - | chr2_4:56399219-56399238 | None:intergenic | 50.0% | |
| ! | TTTGGAGTGAGCGCGGAAAA+TGG | - | chr2_4:56399220-56399239 | None:intergenic | 50.0% |
| !! | TGCATTGTTGGTGGTGGAGA+CGG | - | chr2_4:56399268-56399287 | None:intergenic | 50.0% |
| ! | GTTGACTGCATTGTTGGTGG+TGG | - | chr2_4:56399274-56399293 | None:intergenic | 50.0% |
| TTTACGGATATGCGCCGAGA+GGG | - | chr2_4:56399346-56399365 | None:intergenic | 50.0% | |
| ! | TTTTACGGATATGCGCCGAG+AGG | - | chr2_4:56399347-56399366 | None:intergenic | 50.0% |
| ! | AGGGAGATTGGTTGAGATGG+AGG | - | chr2_4:56399371-56399390 | None:intergenic | 50.0% |
| ! | GGAAGGGAGATTGGTTGAGA+TGG | - | chr2_4:56399374-56399393 | None:intergenic | 50.0% |
| !!! | TGCGCCTTGGGATTTTGGTT+CGG | - | chr2_4:56399437-56399456 | None:intergenic | 50.0% |
| ! | TGTGATGCGCCTTGGGATTT+TGG | - | chr2_4:56399442-56399461 | None:intergenic | 50.0% |
| GATTGCTTGTGATGCGCCTT+GGG | - | chr2_4:56399449-56399468 | None:intergenic | 50.0% | |
| CAAGCAATCCTCTACGGTGT+CGG | + | chr2_4:56399460-56399479 | Msa0336850:CDS | 50.0% | |
| GGTGTTTCCTTCGTACCAGA+CGG | - | chr2_4:56399530-56399549 | None:intergenic | 50.0% | |
| TAACAGCTTCGGAGAGATGG+AGG | - | chr2_4:56399567-56399586 | None:intergenic | 50.0% | |
| !! | GCTATTTCTATGGGGACCAG+AGG | + | chr2_4:56399649-56399668 | Msa0336850:CDS | 50.0% |
| ATGGCTGCTCAGTGGTATGA+TGG | + | chr2_4:56399727-56399746 | Msa0336850:CDS | 50.0% | |
| TGGCTGCTCAGTGGTATGAT+GGG | + | chr2_4:56399728-56399747 | Msa0336850:CDS | 50.0% | |
| ! | TGATTTGTGTGTAGGCAGGG+TGG | + | chr2_4:56400541-56400560 | Msa0336850:intron | 50.0% |
| ! | TTTCCAGCCTGGTCACTTTC+AGG | + | chr2_4:56400980-56400999 | Msa0336850:intron | 50.0% |
| ! | TTCCAGCCTGGTCACTTTCA+GGG | + | chr2_4:56400981-56401000 | Msa0336850:intron | 50.0% |
| GTATCACCCTGAAAGTGACC+AGG | - | chr2_4:56400990-56401009 | None:intergenic | 50.0% | |
| CGACATAGTGTCTGCCTTTC+AGG | + | chr2_4:56401013-56401032 | Msa0336850:CDS | 50.0% | |
| CCACAGTAACAGATGCGACA+AGG | - | chr2_4:56401049-56401068 | None:intergenic | 50.0% | |
| CCTTGTCGCATCTGTTACTG+TGG | + | chr2_4:56401046-56401065 | Msa0336850:intron | 50.0% | |
| ACGGGGTCACAAAGGGAAAA+AGG | + | chr2_4:56401346-56401365 | Msa0336850:intron | 50.0% | |
| GGGTCACAAAGGGAAAAAGG+TGG | + | chr2_4:56401349-56401368 | Msa0336850:intron | 50.0% | |
| ! | CTTTAGTGGATCCTCAGCAG+GGG | - | chr2_4:56401907-56401926 | None:intergenic | 50.0% |
| !! | TTGGATGAGTGTCGGTTAGC+TGG | + | chr2_4:56401927-56401946 | Msa0336850:CDS | 50.0% |
| !! | AGAAGGTAGCGGATAACTGC+AGG | - | chr2_4:56402454-56402473 | None:intergenic | 50.0% |
| TATCCGCTACCTTCTTGAGC+AGG | + | chr2_4:56402459-56402478 | Msa0336850:CDS | 50.0% | |
| ATCCGCTACCTTCTTGAGCA+GGG | + | chr2_4:56402460-56402479 | Msa0336850:CDS | 50.0% | |
| GGTCTTTCCAGTGACTAGAG+AGG | - | chr2_4:56402590-56402609 | None:intergenic | 50.0% | |
| ! | CTTTTCCCTCCTTTGTCCGA+AGG | + | chr2_4:56402628-56402647 | Msa0336850:CDS | 50.0% |
| ACAAGCTCATACCTGCCCTT+CGG | - | chr2_4:56402647-56402666 | None:intergenic | 50.0% | |
| ATATGGGAACCTTGCACCAC+AGG | + | chr2_4:56402831-56402850 | Msa0336850:CDS | 50.0% | |
| TATGGGAACCTTGCACCACA+GGG | + | chr2_4:56402832-56402851 | Msa0336850:CDS | 50.0% | |
| !!! | GGTCCCGCACTTGTTTTTGA+AGG | + | chr2_4:56403001-56403020 | Msa0336850:intron | 50.0% |
| GAGTGGGCACCAAAAGTAGA+TGG | + | chr2_4:56403579-56403598 | Msa0336850:intron | 50.0% | |
| TGCTGCGGGTTCTGCATTTA+TGG | + | chr2_4:56404209-56404228 | Msa0336850:intron | 50.0% | |
| AGACGCACAGTAGGAAGGAA+TGG | - | chr2_4:56404238-56404257 | None:intergenic | 50.0% | |
| !! | ACCGACGGAAGATTTTCAGG+AGG | + | chr2_4:56405228-56405247 | Msa0336850:CDS | 50.0% |
| GCCTCCTGAAAATCTTCCGT+CGG | - | chr2_4:56405232-56405251 | None:intergenic | 50.0% | |
| TCATATTTGCCCCGAAGCAC+AGG | + | chr2_4:56405272-56405291 | Msa0336850:CDS | 50.0% | |
| GTCAATTCACCTGTGCTTCG+GGG | - | chr2_4:56405284-56405303 | None:intergenic | 50.0% | |
| GGTCAATTCACCTGTGCTTC+GGG | - | chr2_4:56405285-56405304 | None:intergenic | 50.0% | |
| GTATAGGAAGGCGGTCCAAT+TGG | + | chr2_4:56406197-56406216 | Msa0336850:intron | 50.0% | |
| ! | TGGAGGCACGTAGGAAGAAA+TGG | + | chr2_4:56406297-56406316 | Msa0336850:CDS | 50.0% |
| CTACGCATACAAGCACCTTG+TGG | + | chr2_4:56406568-56406587 | Msa0336850:intron | 50.0% | |
| GTTACACATCCGCTTGAAGC+AGG | - | chr2_4:56406691-56406710 | None:intergenic | 50.0% | |
| !!! | TGAGGGTTTTGGAGTGAGCG+CGG | - | chr2_4:56399227-56399246 | None:intergenic | 55.0% |
| ! | GTGTGGAGTGGTGAGGGTTT+TGG | - | chr2_4:56399238-56399257 | None:intergenic | 55.0% |
| !! | ATTGTTGGTGGTGGAGACGG+CGG | - | chr2_4:56399265-56399284 | None:intergenic | 55.0% |
| GGGTTCAGTGGAAGGGAGAT+TGG | - | chr2_4:56399383-56399402 | None:intergenic | 55.0% | |
| GGATTGCTTGTGATGCGCCT+TGG | - | chr2_4:56399450-56399469 | None:intergenic | 55.0% | |
| !! | ACGGAGGAAACACCGACTTG+TGG | - | chr2_4:56399511-56399530 | None:intergenic | 55.0% |
| ! | AAGTCGGTGTTTCCTCCGTC+TGG | + | chr2_4:56399512-56399531 | Msa0336850:CDS | 55.0% |
| GTTTCCTCCGTCTGGTACGA+AGG | + | chr2_4:56399520-56399539 | Msa0336850:CDS | 55.0% | |
| GTTTCCTTCGTACCAGACGG+AGG | - | chr2_4:56399527-56399546 | None:intergenic | 55.0% | |
| GTTATCCGCAACTCTTGCCC+TGG | + | chr2_4:56401722-56401741 | Msa0336850:CDS | 55.0% | |
| TAGCTCATCTACCCCTGCTG+AGG | + | chr2_4:56401893-56401912 | Msa0336850:intron | 55.0% | |
| AGCCCTGCTCAAGAAGGTAG+CGG | - | chr2_4:56402465-56402484 | None:intergenic | 55.0% | |
| CATACCTGCCCTTCGGACAA+AGG | - | chr2_4:56402640-56402659 | None:intergenic | 55.0% | |
| CAACAGAACCCTGTGGTGCA+AGG | - | chr2_4:56402843-56402862 | None:intergenic | 55.0% | |
| ! | ACGGCCATGGTAAGTTGACC+TGG | + | chr2_4:56404072-56404091 | Msa0336850:intron | 55.0% |
| ATTAGGGGAGAGGGGCCTAA+AGG | + | chr2_4:56404831-56404850 | Msa0336850:CDS | 55.0% | |
| ! | GCAATAATGGGAGCAGGGCT+TGG | + | chr2_4:56404891-56404910 | Msa0336850:CDS | 55.0% |
| AATGGGAGCAGGGCTTGGAA+AGG | + | chr2_4:56404896-56404915 | Msa0336850:CDS | 55.0% | |
| AGGAGGCTCACATGGGTTTG+TGG | + | chr2_4:56405245-56405264 | Msa0336850:CDS | 55.0% | |
| GGCTCACATGGGTTTGTGGT+TGG | + | chr2_4:56405249-56405268 | Msa0336850:CDS | 55.0% | |
| GTGGGTGTGAGTGTGTAACC+AGG | + | chr2_4:56405855-56405874 | Msa0336850:intron | 55.0% | |
| GGAAGGCGGTCCAATTGGTT+TGG | + | chr2_4:56406202-56406221 | Msa0336850:intron | 55.0% | |
| ! | ATGAGGAGATGGAGGCACGT+AGG | + | chr2_4:56406288-56406307 | Msa0336850:CDS | 55.0% |
| ! | GGAGGAGTGTGGAGTGGTGA+GGG | - | chr2_4:56399244-56399263 | None:intergenic | 60.0% |
| ! | AGTAGGGAAGAGGGGGGTGT+AGG | - | chr2_4:56399311-56399330 | None:intergenic | 60.0% |
| GGTGTGAGTAGGGAAGAGGG+GGG | - | chr2_4:56399317-56399336 | None:intergenic | 60.0% | |
| GGGTGTGAGTAGGGAAGAGG+GGG | - | chr2_4:56399318-56399337 | None:intergenic | 60.0% | |
| GGGGTGTGAGTAGGGAAGAG+GGG | - | chr2_4:56399319-56399338 | None:intergenic | 60.0% | |
| ! | GGGGGTGTGAGTAGGGAAGA+GGG | - | chr2_4:56399320-56399339 | None:intergenic | 60.0% |
| ! | TGGGGGTGTGAGTAGGGAAG+AGG | - | chr2_4:56399321-56399340 | None:intergenic | 60.0% |
| ! | AGGGAGTGGGGGTGTGAGTA+GGG | - | chr2_4:56399327-56399346 | None:intergenic | 60.0% |
| ATATGCGCCGAGAGGGAGTG+GGG | - | chr2_4:56399339-56399358 | None:intergenic | 60.0% | |
| GATATGCGCCGAGAGGGAGT+GGG | - | chr2_4:56399340-56399359 | None:intergenic | 60.0% | |
| !! | AAAGAAGGCGTCGCCGAAGC+CGG | + | chr2_4:56399586-56399605 | Msa0336850:CDS | 60.0% |
| CACCCTGAAAGTGACCAGGC+TGG | - | chr2_4:56400986-56401005 | None:intergenic | 60.0% | |
| CAGCACCAGGGCAAGAGTTG+CGG | - | chr2_4:56401730-56401749 | None:intergenic | 60.0% | |
| GCAACTCTTGCCCTGGTGCT+GGG | + | chr2_4:56401729-56401748 | Msa0336850:CDS | 60.0% | |
| ! | CAACTCTTGCCCTGGTGCTG+GGG | + | chr2_4:56401730-56401749 | Msa0336850:CDS | 60.0% |
| CCTGCCCTTCGGACAAAGGA+GGG | - | chr2_4:56402636-56402655 | None:intergenic | 60.0% | |
| ACCTGCCCTTCGGACAAAGG+AGG | - | chr2_4:56402637-56402656 | None:intergenic | 60.0% | |
| ! | CTGCGGGTGCTGTCTTGAGA+CGG | + | chr2_4:56404053-56404072 | Msa0336850:intron | 60.0% |
| GTGCTGTCTTGAGACGGCCA+TGG | + | chr2_4:56404059-56404078 | Msa0336850:intron | 60.0% | |
| AGAGGGGCCTAAAGGTGGTC+CGG | + | chr2_4:56404839-56404858 | Msa0336850:CDS | 60.0% | |
| GGCATTCCCGGACCACCTTT+AGG | - | chr2_4:56404849-56404868 | None:intergenic | 60.0% | |
| ! | CGGAGGAGTGTGGAGTGGTG+AGG | - | chr2_4:56399245-56399264 | None:intergenic | 65.0% |
| ! | GGGAAGAGGGGGGTGTAGGT+TGG | - | chr2_4:56399307-56399326 | None:intergenic | 65.0% |
| ! | GAGGGAGTGGGGGTGTGAGT+AGG | - | chr2_4:56399328-56399347 | None:intergenic | 65.0% |
| CTCACACCCCCACTCCCTCT+CGG | + | chr2_4:56399329-56399348 | Msa0336850:CDS | 65.0% | |
| TATGCGCCGAGAGGGAGTGG+GGG | - | chr2_4:56399338-56399357 | None:intergenic | 65.0% | |
| GGATATGCGCCGAGAGGGAG+TGG | - | chr2_4:56399341-56399360 | None:intergenic | 65.0% | |
| CGCAACTCTTGCCCTGGTGC+TGG | + | chr2_4:56401728-56401747 | Msa0336850:CDS | 65.0% | |
| CACCACAAGCCCCAGCACCA+GGG | - | chr2_4:56401742-56401761 | None:intergenic | 65.0% | |
| CCCTCCTTTGTCCGAAGGGC+AGG | + | chr2_4:56402633-56402652 | Msa0336850:CDS | 65.0% | |
| AGGGGAGAGGGGCCTAAAGG+TGG | + | chr2_4:56404834-56404853 | Msa0336850:CDS | 65.0% | |
| GAGGGGCCTAAAGGTGGTCC+GGG | + | chr2_4:56404840-56404859 | Msa0336850:CDS | 65.0% | |
| ! | GACGGCGGAGGAGTGTGGAG+TGG | - | chr2_4:56399250-56399269 | None:intergenic | 70.0% |
| GTGGAGACGGCGGAGGAGTG+TGG | - | chr2_4:56399255-56399274 | None:intergenic | 70.0% | |
| !! | GTTGGTGGTGGAGACGGCGG+AGG | - | chr2_4:56399262-56399281 | None:intergenic | 70.0% |
| CGGAGAGGCCGACACCGTAG+AGG | - | chr2_4:56399471-56399490 | None:intergenic | 70.0% | |
| ! | TGCCCTGGTGCTGGGGCTTG+TGG | + | chr2_4:56401737-56401756 | Msa0336850:CDS | 70.0% |
| CCACCACAAGCCCCAGCACC+AGG | - | chr2_4:56401743-56401762 | None:intergenic | 70.0% | |
| ! | CCTGGTGCTGGGGCTTGTGG+TGG | + | chr2_4:56401740-56401759 | Msa0336850:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 56399131 | 56407051 | 56399131 | ID=Msa0336850;Name=Msa0336850 |
| chr2_4 | mRNA | 56399131 | 56407051 | 56399131 | ID=Msa0336850-mRNA-1;Parent=Msa0336850;Name=Msa0336850-mRNA-1;_AED=0.14;_eAED=0.14;_QI=152|1|1|1|1|1|14|331|598 |
| chr2_4 | exon | 56399131 | 56399780 | 56399131 | ID=Msa0336850-mRNA-1:exon:17232;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56399857 | 56399928 | 56399857 | ID=Msa0336850-mRNA-1:exon:17233;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56400987 | 56401034 | 56400987 | ID=Msa0336850-mRNA-1:exon:17234;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56401671 | 56401825 | 56401671 | ID=Msa0336850-mRNA-1:exon:17235;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56401896 | 56402090 | 56401896 | ID=Msa0336850-mRNA-1:exon:17236;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56402168 | 56402279 | 56402168 | ID=Msa0336850-mRNA-1:exon:17237;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56402439 | 56402508 | 56402439 | ID=Msa0336850-mRNA-1:exon:17238;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56402596 | 56402654 | 56402596 | ID=Msa0336850-mRNA-1:exon:17239;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56402775 | 56402898 | 56402775 | ID=Msa0336850-mRNA-1:exon:17240;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56403002 | 56403072 | 56403002 | ID=Msa0336850-mRNA-1:exon:17241;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56404816 | 56404917 | 56404816 | ID=Msa0336850-mRNA-1:exon:17242;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56405213 | 56405293 | 56405213 | ID=Msa0336850-mRNA-1:exon:17243;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56406203 | 56406361 | 56406203 | ID=Msa0336850-mRNA-1:exon:17244;Parent=Msa0336850-mRNA-1 |
| chr2_4 | exon | 56406670 | 56407051 | 56406670 | ID=Msa0336850-mRNA-1:exon:17245;Parent=Msa0336850-mRNA-1 |
| chr2_4 | five_prime_UTR | 56399131 | 56399282 | 56399131 | ID=Msa0336850-mRNA-1:five_prime_utr;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56399283 | 56399780 | 56399283 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56399857 | 56399928 | 56399857 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56400987 | 56401034 | 56400987 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56401671 | 56401825 | 56401671 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56401896 | 56402090 | 56401896 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56402168 | 56402279 | 56402168 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56402439 | 56402508 | 56402439 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56402596 | 56402654 | 56402596 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56402775 | 56402898 | 56402775 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56403002 | 56403072 | 56403002 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56404816 | 56404917 | 56404816 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56405213 | 56405293 | 56405213 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56406203 | 56406361 | 56406203 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | CDS | 56406670 | 56406720 | 56406670 | ID=Msa0336850-mRNA-1:cds;Parent=Msa0336850-mRNA-1 |
| chr2_4 | three_prime_UTR | 56406721 | 56407051 | 56406721 | ID=Msa0336850-mRNA-1:three_prime_utr;Parent=Msa0336850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
