Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0219930 | XP_003597071.1 | 98.829 | 598 | 7 | 0 | 1 | 598 | 1 | 598 | 0.0 | 1216 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0219930 | sp|Q9LIR4|ILVD_ARATH | 81.281 | 609 | 102 | 3 | 1 | 598 | 1 | 608 | 0.0 | 1015 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0219930 | G7IRL3 | 98.829 | 598 | 7 | 0 | 1 | 598 | 1 | 598 | 0.0 | 1216 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0219930 | Msa0261240 | 0.825670 | 4.130746e-54 | -8.615850e-47 |
Msa0219930 | Msa0299210 | 0.940400 | 2.489944e-100 | -8.615850e-47 |
Msa0219930 | Msa0336850 | 0.956588 | 2.070571e-114 | -8.615850e-47 |
Msa0219930 | Msa0515110 | 0.812563 | 3.981862e-51 | -8.615850e-47 |
Msa0219930 | Msa1385570 | 0.808454 | 3.072472e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0219930 | MtrunA17_Chr2g0323281 | 98.829 | 598 | 7 | 0 | 1 | 598 | 1 | 598 | 0.0 | 1216 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0219930 | AT3G23940.1 | 81.281 | 609 | 102 | 3 | 1 | 598 | 1 | 608 | 0.0 | 1015 |
Msa0219930 | AT3G23940.2 | 80.952 | 609 | 102 | 4 | 1 | 598 | 1 | 606 | 0.0 | 1006 |
Find 202 sgRNAs with CRISPR-Local
Find 569 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCCAGCCTGGTCACTTTC+AGG | 0.117730 | 2_1:+67913545 | Msa0219930:intron |
CGACATAGTGTCAGCCTTTC+AGG | 0.133820 | 2_1:+67913578 | Msa0219930:CDS |
AGGGAAAAGTGGTTATAATT+AGG | 0.154908 | 2_1:+67917391 | Msa0219930:intron |
CGGCCGAGTATTATGGTTTA+TGG | 0.175518 | 2_1:+67912433 | Msa0219930:CDS |
TGTGATGCGCCTTGGGATTT+TGG | 0.194793 | 2_1:-67911977 | None:intergenic |
TTTGGAGTGGGCGCGGAAAA+TGG | 0.197404 | 2_1:-67911755 | None:intergenic |
CCAATTGGTTTGGTTCAAAA+TGG | 0.215142 | 2_1:+67918791 | Msa0219930:CDS |
GCTTAATCGGCCGAGTATTA+TGG | 0.236530 | 2_1:+67912426 | Msa0219930:CDS |
GCTCACATTCAAATATTATA+TGG | 0.247778 | 2_1:+67915379 | Msa0219930:CDS |
CGCAACTCTTGCCCTGGTGC+TGG | 0.248574 | 2_1:+67914293 | Msa0219930:CDS |
GTGTGGAGTGGTGAGGGTTT+TGG | 0.252172 | 2_1:-67911773 | None:intergenic |
GGTTCTGTTGCTAAAATTAC+TGG | 0.255922 | 2_1:+67915418 | Msa0219930:CDS |
GGTTTATGGTGGGACTATTA+AGG | 0.261788 | 2_1:+67912447 | Msa0219930:CDS |
GGGAAAAGTGGTTATAATTA+GGG | 0.262386 | 2_1:+67917392 | Msa0219930:intron |
GGTCAATTCACCTGTGCTTC+GGG | 0.267851 | 2_1:-67917859 | None:intergenic |
CCGTTTAGGTTTAACACTAT+TGG | 0.267962 | 2_1:+67912154 | Msa0219930:CDS |
AACACCAACAAGTGCAATAA+TGG | 0.278323 | 2_1:+67917455 | Msa0219930:CDS |
AAAATTCAACAATGACTAAA+AGG | 0.289822 | 2_1:+67919553 | Msa0219930:three_prime_UTR |
TGTTAGTGATGCTATTTCTA+TGG | 0.297967 | 2_1:+67912177 | Msa0219930:CDS |
TTGTCTGTGCTCATCACTAA+TGG | 0.319858 | 2_1:-67914261 | None:intergenic |
TTGCAATGGGACGGCTTAAT+CGG | 0.323041 | 2_1:+67912413 | Msa0219930:CDS |
GCAACTCTTGCCCTGGTGCT+GGG | 0.328886 | 2_1:+67914294 | Msa0219930:CDS |
GCTCCCATTATTGCACTTGT+TGG | 0.332394 | 2_1:-67917459 | None:intergenic |
GGGTGTGAGTAGGGAAGAGG+GGG | 0.336897 | 2_1:-67911853 | None:intergenic |
AAAAGGTTGGATTGATTCCT+TGG | 0.351754 | 2_1:+67919528 | Msa0219930:three_prime_UTR |
GGGGTGTGAGTAGGGAAGAG+GGG | 0.357487 | 2_1:-67911854 | None:intergenic |
TGGTCAATTCACCTGTGCTT+CGG | 0.357886 | 2_1:-67917860 | None:intergenic |
GTTAGCTGGTAAATATCTTC+TGG | 0.370078 | 2_1:+67914506 | Msa0219930:CDS |
ATGTGATTCAGGAAATAATA+AGG | 0.379704 | 2_1:+67915329 | Msa0219930:intron |
CGACACTCATCCAACTTTAG+TGG | 0.382850 | 2_1:-67914483 | None:intergenic |
AATGTGAGCTGTCTTCTTGA+TGG | 0.385994 | 2_1:-67915365 | None:intergenic |
GGGTTCAGTGGAAGGGAGAT+TGG | 0.386715 | 2_1:-67911918 | None:intergenic |
TAACTGATACAACATTCTAT+TGG | 0.388089 | 2_1:-67919499 | None:intergenic |
CGGAAAATGGGTTTAGGAAT+AGG | 0.389098 | 2_1:-67911742 | None:intergenic |
ACTCCTTGATTAGCTTTGTA+TGG | 0.389577 | 2_1:-67918908 | None:intergenic |
TTCCAGCCTGGTCACTTTCA+GGG | 0.392330 | 2_1:+67913546 | Msa0219930:intron |
AAGCCGGTATGATTCCGTTT+AGG | 0.395452 | 2_1:+67912140 | Msa0219930:CDS |
TTGGAGTGGGCGCGGAAAAT+GGG | 0.397885 | 2_1:-67911754 | None:intergenic |
TGCCCTGGTGCTGGGGCTTG+TGG | 0.398033 | 2_1:+67914302 | Msa0219930:CDS |
CCCTCCTTTGTCCGAAGGGC+AGG | 0.404283 | 2_1:+67915198 | Msa0219930:CDS |
GCAATAATGGGAGCAGGGCT+TGG | 0.409364 | 2_1:+67917468 | Msa0219930:CDS |
AGGAGGCTCACATGGGTTTG+TGG | 0.419181 | 2_1:+67917822 | Msa0219930:CDS |
TGATAGTATTGAAACTGTTA+TGG | 0.420877 | 2_1:+67912246 | Msa0219930:CDS |
ACCAAGTGGGAAATATGTTA+TGG | 0.424001 | 2_1:+67914808 | Msa0219930:CDS |
TATTGCAGAAGCCATGGTAT+TGG | 0.427861 | 2_1:-67914339 | None:intergenic |
GTTAGTGATGCTATTTCTAT+GGG | 0.429162 | 2_1:+67912178 | Msa0219930:CDS |
GATTGCTTGTGATGCGCCTT+GGG | 0.429666 | 2_1:-67911984 | None:intergenic |
GGAAGGCGGTCCAATTGGTT+TGG | 0.434299 | 2_1:+67918781 | Msa0219930:intron |
TCTTCTGGAGTTATTGAAGA+TGG | 0.434771 | 2_1:+67914521 | Msa0219930:CDS |
TAATGCAATGGTTATAGTTA+TGG | 0.436101 | 2_1:+67914584 | Msa0219930:CDS |
CCAATAGTGTTAAACCTAAA+CGG | 0.436787 | 2_1:-67912154 | None:intergenic |
GACGCCTTCTTTAACAGCTT+CGG | 0.436848 | 2_1:-67912113 | None:intergenic |
CTTGTTGGTGTTAACATCTC+AGG | 0.438306 | 2_1:-67917444 | None:intergenic |
AGAGGGGCCTAAAGGTGGTC+CGG | 0.441258 | 2_1:+67917416 | Msa0219930:CDS |
TATCCGCTACCTTCTTGAGC+AGG | 0.442235 | 2_1:+67915024 | Msa0219930:CDS |
GGCTTCTGCAATAGAAGCTA+TGG | 0.444733 | 2_1:+67914349 | Msa0219930:CDS |
TGGGCGCGGAAAATGGGTTT+AGG | 0.448493 | 2_1:-67911748 | None:intergenic |
AACTTTAGTGGATCCTCAGC+AGG | 0.450092 | 2_1:-67914471 | None:intergenic |
ATGTGAGCTGTCTTCTTGAT+GGG | 0.450781 | 2_1:-67915364 | None:intergenic |
AAAGAGGGCTTGTACTTCTC+TGG | 0.452152 | 2_1:+67915442 | Msa0219930:CDS |
ATGGAGGAGATGCATATTGC+AGG | 0.456417 | 2_1:-67912086 | None:intergenic |
ACACCAACAAGTGCAATAAT+GGG | 0.457055 | 2_1:+67917456 | Msa0219930:CDS |
GTGGAGACGGCGGAGGAGTG+TGG | 0.458595 | 2_1:-67911790 | None:intergenic |
AAACGGAATCATACCGGCTT+CGG | 0.459460 | 2_1:-67912137 | None:intergenic |
AGGGAGATTGGTTGAGATGG+AGG | 0.460672 | 2_1:-67911906 | None:intergenic |
GGAAGGGAGATTGGTTGAGA+TGG | 0.461148 | 2_1:-67911909 | None:intergenic |
ACTCAAAGGATCCTCTGAAA+TGG | 0.461447 | 2_1:-67915610 | None:intergenic |
TTGGATGAGTGTCGGTTAGC+TGG | 0.462370 | 2_1:+67914492 | Msa0219930:CDS |
GGCTCACATGGGTTTGTGGT+TGG | 0.462556 | 2_1:+67917826 | Msa0219930:CDS |
CCACCACAAGCCCCAGCACC+AGG | 0.462621 | 2_1:-67914305 | None:intergenic |
ATGGTTATAGTTATGGCACT+TGG | 0.466130 | 2_1:+67914591 | Msa0219930:CDS |
GTATAGGAAGGCGGTCCAAT+TGG | 0.467916 | 2_1:+67918776 | Msa0219930:intron |
GGATATGCGCCGAGAGGGAG+TGG | 0.468944 | 2_1:-67911876 | None:intergenic |
TGCTGAGGATCCACTAAAGT+TGG | 0.471309 | 2_1:+67914473 | Msa0219930:CDS |
TGTATCAGTTAGTAATGAAA+AGG | 0.471889 | 2_1:+67919511 | Msa0219930:three_prime_UTR |
AGTAGGTAGTGAGTGTAAGA+AGG | 0.472051 | 2_1:-67911713 | None:intergenic |
TGGTTATAGTTATGGCACTT+GGG | 0.472814 | 2_1:+67914592 | Msa0219930:CDS |
TCAGTTAGTAATGAAAAGGT+TGG | 0.473863 | 2_1:+67919515 | Msa0219930:three_prime_UTR |
AAGTCGGTGTTTCCTCCGTC+TGG | 0.474497 | 2_1:+67912050 | Msa0219930:CDS |
TGGAGGCACGTAGGAAGAAA+TGG | 0.480214 | 2_1:+67918876 | Msa0219930:CDS |
CTTTAACAGCTTCGGAGAGA+TGG | 0.483156 | 2_1:-67912105 | None:intergenic |
TTAGGAATAGGAGTAGTAGT+AGG | 0.483707 | 2_1:-67911730 | None:intergenic |
GGATTGCTTGTGATGCGCCT+TGG | 0.486243 | 2_1:-67911985 | None:intergenic |
GTTACACATCCGCTTGAAGC+AGG | 0.486487 | 2_1:-67919265 | None:intergenic |
GTTAACATCTCAGGCATTCC+CGG | 0.486785 | 2_1:-67917435 | None:intergenic |
TACACATATACTTACCTGTA+TGG | 0.488036 | 2_1:-67914383 | None:intergenic |
ACAAGTGCAATAATGGGAGC+AGG | 0.488293 | 2_1:+67917462 | Msa0219930:CDS |
TTAGATGGTGACTGTATGAC+TGG | 0.490018 | 2_1:+67915052 | Msa0219930:CDS |
GGAGGAGTGTGGAGTGGTGA+GGG | 0.492568 | 2_1:-67911779 | None:intergenic |
ATATGGGAACCTTGCACCAC+AGG | 0.492675 | 2_1:+67915396 | Msa0219930:CDS |
CGGAGGAGTGTGGAGTGGTG+AGG | 0.493226 | 2_1:-67911780 | None:intergenic |
CTCACATTCAAATATTATAT+GGG | 0.494054 | 2_1:+67915380 | Msa0219930:CDS |
CCTGGTGCTGGGGCTTGTGG+TGG | 0.495654 | 2_1:+67914305 | Msa0219930:CDS |
ATGGCTGCTCAGTGGTATGA+TGG | 0.498652 | 2_1:+67912265 | Msa0219930:CDS |
AAGAGAGTTGACTGCATTGT+TGG | 0.499912 | 2_1:-67911815 | None:intergenic |
GGCATTCCCGGACCACCTTT+AGG | 0.500486 | 2_1:-67917423 | None:intergenic |
TGTTATGGAAGATGTTCATA+AGG | 0.500613 | 2_1:+67914823 | Msa0219930:CDS |
TTTAGTTTCAGATGAGGAGA+TGG | 0.500756 | 2_1:+67918856 | Msa0219930:CDS |
TCCATAACATATTTCCCACT+TGG | 0.500968 | 2_1:-67914809 | None:intergenic |
TCATATTTGCCCCGAAGCAC+AGG | 0.506450 | 2_1:+67917849 | Msa0219930:CDS |
GTTTCCTCCGTCTGGTACGA+AGG | 0.509135 | 2_1:+67912058 | Msa0219930:CDS |
CCGAGTATTATGGTTTATGG+TGG | 0.510613 | 2_1:+67912436 | Msa0219930:CDS |
TGCTAAAATTACTGGGAAAG+AGG | 0.511168 | 2_1:+67915426 | Msa0219930:CDS |
GATATGCGCCGAGAGGGAGT+GGG | 0.512406 | 2_1:-67911875 | None:intergenic |
CAACTCTTGCCCTGGTGCTG+GGG | 0.513202 | 2_1:+67914295 | Msa0219930:CDS |
TGCATTGTTGGTGGTGGAGA+CGG | 0.514476 | 2_1:-67911803 | None:intergenic |
ATCCGCTACCTTCTTGAGCA+GGG | 0.515882 | 2_1:+67915025 | Msa0219930:CDS |
ACAAGAACAAAGAGAGGAGG+TGG | 0.518642 | 2_1:-67919462 | None:intergenic |
GAGGGGCCTAAAGGTGGTCC+GGG | 0.520674 | 2_1:+67917417 | Msa0219930:CDS |
TGGGAATGTCTCTTCCATAC+AGG | 0.521706 | 2_1:+67914369 | Msa0219930:CDS |
ATATGCGCCGAGAGGGAGTG+GGG | 0.524717 | 2_1:-67911874 | None:intergenic |
CCAGGTACGATTATTGCAAT+GGG | 0.526211 | 2_1:+67912400 | Msa0219930:CDS |
AAAGAAGGCGTCGCCGAAGC+CGG | 0.526533 | 2_1:+67912124 | Msa0219930:CDS |
CCTTGATTAGCTTTGTATGG+TGG | 0.527040 | 2_1:-67918905 | None:intergenic |
CTCTCCGAAGCTGTTAAAGA+AGG | 0.527790 | 2_1:+67912109 | Msa0219930:CDS |
ATTTGCGAGTGATGATATCT+CGG | 0.528099 | 2_1:-67914554 | None:intergenic |
TTTGCGAGTGATGATATCTC+GGG | 0.529623 | 2_1:-67914553 | None:intergenic |
GGTGTGAGTAGGGAAGAGGG+GGG | 0.533041 | 2_1:-67911852 | None:intergenic |
GTTGACTGCATTGTTGGTGG+TGG | 0.535839 | 2_1:-67911809 | None:intergenic |
ATTAGGGGAGAGGGGCCTAA+AGG | 0.536401 | 2_1:+67917408 | Msa0219930:CDS |
AGAAGGTAGCGGATAACTGC+AGG | 0.536631 | 2_1:-67915016 | None:intergenic |
GCCAGGTACGATTATTGCAA+TGG | 0.537519 | 2_1:+67912399 | Msa0219930:CDS |
ACAAATAATCGAATTTCGCT+CGG | 0.538053 | 2_1:-67919322 | None:intergenic |
GTGGTTATAATTAGGGGAGA+GGG | 0.540279 | 2_1:+67917399 | Msa0219930:CDS |
GGTTATAGTTATGGCACTTG+GGG | 0.541562 | 2_1:+67914593 | Msa0219930:CDS |
CCCATTGCAATAATCGTACC+TGG | 0.543081 | 2_1:-67912400 | None:intergenic |
CGAGTATTATGGTTTATGGT+GGG | 0.545527 | 2_1:+67912437 | Msa0219930:CDS |
CATACCTGCCCTTCGGACAA+AGG | 0.545958 | 2_1:-67915202 | None:intergenic |
CAAGCAATCCTCTACGGCGT+TGG | 0.551950 | 2_1:+67911998 | Msa0219930:CDS |
ACAACATTCTATTGGTACAA+TGG | 0.552051 | 2_1:-67919491 | None:intergenic |
GTTATCCGCAACTCTTGCCC+TGG | 0.552508 | 2_1:+67914287 | Msa0219930:CDS |
GTTGGTGGTGGAGACGGCGG+AGG | 0.552994 | 2_1:-67911797 | None:intergenic |
CCACCATACAAAGCTAATCA+AGG | 0.554290 | 2_1:+67918905 | Msa0219930:CDS |
AAACCTAAACGGAATCATAC+CGG | 0.556763 | 2_1:-67912143 | None:intergenic |
CAGCACCAGGGCAAGAGTTG+CGG | 0.558320 | 2_1:-67914292 | None:intergenic |
GCTAAAATTACTGGGAAAGA+GGG | 0.559213 | 2_1:+67915427 | Msa0219930:CDS |
ACAAGCTCATACCTGCCCTT+CGG | 0.561919 | 2_1:-67915209 | None:intergenic |
ATCTATGGAGAATATGTAAG+TGG | 0.565387 | 2_1:+67914236 | Msa0219930:CDS |
AATGATTGCTGCCATTTCAG+AGG | 0.565835 | 2_1:+67915599 | Msa0219930:CDS |
AGCTTCTATTGCAGAAGCCA+TGG | 0.567148 | 2_1:-67914345 | None:intergenic |
AGAAATACCTTAAAACTCAA+AGG | 0.570148 | 2_1:-67915624 | None:intergenic |
CAACAGAACCCTGTGGTGCA+AGG | 0.570810 | 2_1:-67915405 | None:intergenic |
AATTAAGTGCAACACAGCAT+TGG | 0.571085 | 2_1:-67914622 | None:intergenic |
CCACCATAAACCATAATACT+CGG | 0.574808 | 2_1:-67912436 | None:intergenic |
GATGGGAATATCTCTATCCC+TGG | 0.579378 | 2_1:+67912283 | Msa0219930:CDS |
CAAATCACTACGTAATGCAA+TGG | 0.580078 | 2_1:+67914572 | Msa0219930:CDS |
TTTACGGATATGCGCCGAGA+GGG | 0.580426 | 2_1:-67911881 | None:intergenic |
AGGGGAGAGGGGCCTAAAGG+TGG | 0.580612 | 2_1:+67917411 | Msa0219930:CDS |
AGTTTCAGATGAGGAGATGG+AGG | 0.581157 | 2_1:+67918859 | Msa0219930:CDS |
CACTAAAGTTGGATGAGTGT+CGG | 0.583464 | 2_1:+67914484 | Msa0219930:CDS |
GTTCTGTTGCTAAAATTACT+GGG | 0.584915 | 2_1:+67915419 | Msa0219930:CDS |
TTGCTGATCTTAAACCAAGT+GGG | 0.585342 | 2_1:+67914795 | Msa0219930:CDS |
CAAGATGCATATAAATGCAC+CGG | 0.585580 | 2_1:-67919385 | None:intergenic |
TAATCAAGGAGTTCTGTACA+AGG | 0.587317 | 2_1:+67918919 | Msa0219930:CDS |
GCTTCTGCAATAGAAGCTAT+GGG | 0.587369 | 2_1:+67914350 | Msa0219930:CDS |
TAGCTCATCTACCCCTGCTG+AGG | 0.587403 | 2_1:+67914458 | Msa0219930:intron |
AGTGGTTATAATTAGGGGAG+AGG | 0.589058 | 2_1:+67917398 | Msa0219930:CDS |
TAACAGCTTCGGAGAGATGG+AGG | 0.590889 | 2_1:-67912102 | None:intergenic |
GGTTTAAGATCAGCAATGAA+AGG | 0.596756 | 2_1:-67914788 | None:intergenic |
GCCTCCTGAAAATCTTCCGT+CGG | 0.597517 | 2_1:-67917806 | None:intergenic |
CCTGCCCTTCGGACAAAGGA+GGG | 0.597677 | 2_1:-67915198 | None:intergenic |
TGGCTGCTCAGTGGTATGAT+GGG | 0.598046 | 2_1:+67912266 | Msa0219930:CDS |
AAGGGTTTCTCGTACCTGAA+AGG | 0.598233 | 2_1:-67913592 | None:intergenic |
CACCACAAGCCCCAGCACCA+GGG | 0.598273 | 2_1:-67914304 | None:intergenic |
GCATCACAAGCAATCCTCTA+CGG | 0.599375 | 2_1:+67911992 | Msa0219930:CDS |
AGAGTTGACTGCATTGTTGG+TGG | 0.600708 | 2_1:-67911812 | None:intergenic |
AATGTGAAGCCTGCTTCAAG+CGG | 0.600752 | 2_1:+67919256 | Msa0219930:CDS |
GGAAAAGTGGTTATAATTAG+GGG | 0.602105 | 2_1:+67917393 | Msa0219930:CDS |
ATTGCTGATCTTAAACCAAG+TGG | 0.603106 | 2_1:+67914794 | Msa0219930:CDS |
GGTGTTTCCTTCGTACCAGA+CGG | 0.603762 | 2_1:-67912065 | None:intergenic |
TCTTTGATTGTATAGGAAGG+CGG | 0.609260 | 2_1:+67918767 | Msa0219930:intron |
TATGGGAACCTTGCACCACA+GGG | 0.609311 | 2_1:+67915397 | Msa0219930:CDS |
GACGGCGGAGGAGTGTGGAG+TGG | 0.613705 | 2_1:-67911785 | None:intergenic |
CGGAGAGACCAACGCCGTAG+AGG | 0.614043 | 2_1:-67912006 | None:intergenic |
CAAACTATAACACATCCCTC+TGG | 0.616653 | 2_1:-67912203 | None:intergenic |
ACTTTAGTGGATCCTCAGCA+GGG | 0.617910 | 2_1:-67914470 | None:intergenic |
AGCCCTGCTCAAGAAGGTAG+CGG | 0.618317 | 2_1:-67915027 | None:intergenic |
GTACGATTATTGCAATGGGA+CGG | 0.618329 | 2_1:+67912404 | Msa0219930:CDS |
ACCTGCCCTTCGGACAAAGG+AGG | 0.618941 | 2_1:-67915199 | None:intergenic |
CAAGTGCAATAATGGGAGCA+GGG | 0.619179 | 2_1:+67917463 | Msa0219930:CDS |
CTATTTCTATGGGGACCAGA+GGG | 0.619479 | 2_1:+67912188 | Msa0219930:CDS |
ATGAGGAGATGGAGGCACGT+AGG | 0.619919 | 2_1:+67918867 | Msa0219930:CDS |
GTATCACCCTGAAAGTGACC+AGG | 0.624750 | 2_1:-67913552 | None:intergenic |
TATGCGCCGAGAGGGAGTGG+GGG | 0.627445 | 2_1:-67911873 | None:intergenic |
GCTATTTCTATGGGGACCAG+AGG | 0.631937 | 2_1:+67912187 | Msa0219930:CDS |
AATGGGAGCAGGGCTTGGAA+AGG | 0.632169 | 2_1:+67917473 | Msa0219930:CDS |
GTCAATTCACCTGTGCTTCG+GGG | 0.638435 | 2_1:-67917858 | None:intergenic |
TGGTTATAATTAGGGGAGAG+GGG | 0.645447 | 2_1:+67917400 | Msa0219930:CDS |
ATTGTTGGTGGTGGAGACGG+CGG | 0.647416 | 2_1:-67911800 | None:intergenic |
GTTATAGTTATGGCACTTGG+GGG | 0.651003 | 2_1:+67914594 | Msa0219930:CDS |
GATGTTGCTTTATTGACCGA+CGG | 0.651827 | 2_1:+67917790 | Msa0219930:CDS |
ATCACCGAACCAAAATCCCA+AGG | 0.655043 | 2_1:+67911968 | Msa0219930:CDS |
AAATAAACAAGAACAAAGAG+AGG | 0.658648 | 2_1:-67919468 | None:intergenic |
TTAGTGATGCTATTTCTATG+GGG | 0.661423 | 2_1:+67912179 | Msa0219930:CDS |
TTGCGAGTGATGATATCTCG+GGG | 0.664575 | 2_1:-67914552 | None:intergenic |
TAAACAAGAACAAAGAGAGG+AGG | 0.669056 | 2_1:-67919465 | None:intergenic |
TGTGTAACAGACGAGTAGAG+AGG | 0.671695 | 2_1:+67919280 | Msa0219930:exon |
GTTTCCTTCGTACCAGACGG+AGG | 0.686800 | 2_1:-67912062 | None:intergenic |
AATGTATACAGCCAATACCA+TGG | 0.690672 | 2_1:+67914328 | Msa0219930:CDS |
ACGGAGGAAACACCGACTTG+TGG | 0.692885 | 2_1:-67912046 | None:intergenic |
CTTTAGTGGATCCTCAGCAG+GGG | 0.705531 | 2_1:-67914469 | None:intergenic |
AAACTGTTATGGCTGCTCAG+TGG | 0.737340 | 2_1:+67912257 | Msa0219930:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAATAGTAATAATAGA+GGG | - | chr2_1:67914881-67914900 | None:intergenic | 10.0% |
!! | TAAAATAATAGTAATAATAG+AGG | - | chr2_1:67914882-67914901 | None:intergenic | 10.0% |
!!! | TAATCAATTTTATGAATTAT+GGG | - | chr2_1:67917066-67917085 | None:intergenic | 10.0% |
!!! | ATAATCAATTTTATGAATTA+TGG | - | chr2_1:67917067-67917086 | None:intergenic | 10.0% |
!! | GATAAAAAATATAAAAAGAA+AGG | - | chr2_1:67917646-67917665 | None:intergenic | 10.0% |
!!! | TTTTAATTAGAAATAGAAAA+AGG | + | chr2_1:67918537-67918556 | Msa0219930:intron | 10.0% |
!!! | TATATGATTTTCATTATTTA+TGG | + | chr2_1:67919417-67919436 | Msa0219930:three_prime_UTR | 10.0% |
!!! | AGAATTAATTTTGACATTTT+TGG | - | chr2_1:67912810-67912829 | None:intergenic | 15.0% |
!! | TTTGTGATTAAAAATGAAAA+TGG | + | chr2_1:67913941-67913960 | Msa0219930:intron | 15.0% |
!! | AAAAATAAAATGAATTTGTC+AGG | + | chr2_1:67914162-67914181 | Msa0219930:intron | 15.0% |
!! | AAAATAAAATGAATTTGTCA+GGG | + | chr2_1:67914163-67914182 | Msa0219930:intron | 15.0% |
!!! | ATTAATGTTTCATTCATTTT+TGG | + | chr2_1:67914202-67914221 | Msa0219930:intron | 15.0% |
!! | TGAAGATTATATATATCATT+AGG | - | chr2_1:67914685-67914704 | None:intergenic | 15.0% |
!!! | AAATCATTGTGTTTTTTTTT+TGG | + | chr2_1:67916520-67916539 | Msa0219930:intron | 15.0% |
!! | TGCATTTAATAATTTATGTA+AGG | + | chr2_1:67917984-67918003 | Msa0219930:intron | 15.0% |
!! | GCATTTAATAATTTATGTAA+GGG | + | chr2_1:67917985-67918004 | Msa0219930:intron | 15.0% |
!! | TTCTAATTAAAAACATCAAA+AGG | - | chr2_1:67918529-67918548 | None:intergenic | 15.0% |
!!! | TTTTACATTTTTATTGAGAA+TGG | + | chr2_1:67918978-67918997 | Msa0219930:intron | 15.0% |
!!! | TTTTCTTTCTTTTAATTCAA+AGG | + | chr2_1:67919071-67919090 | Msa0219930:intron | 15.0% |
!! | TTGTGTATGTTCTTATTATA+TGG | + | chr2_1:67912366-67912385 | Msa0219930:intron | 20.0% |
!! | TGTCAATTGATTATAATTGT+TGG | + | chr2_1:67912556-67912575 | Msa0219930:intron | 20.0% |
!!! | TAAATTTTTTAGCTTCAAGT+AGG | + | chr2_1:67912741-67912760 | Msa0219930:intron | 20.0% |
!!! | ATGTATTTGTTAAAACTTAC+TGG | + | chr2_1:67913267-67913286 | Msa0219930:intron | 20.0% |
!!! | TGTATTTGTTAAAACTTACT+GGG | + | chr2_1:67913268-67913287 | Msa0219930:intron | 20.0% |
!!! | AGTACATCAATTTTATTCAA+GGG | - | chr2_1:67913325-67913344 | None:intergenic | 20.0% |
!!! | AAGTACATCAATTTTATTCA+AGG | - | chr2_1:67913326-67913345 | None:intergenic | 20.0% |
!! | AATAAAATTGATGTACTTCA+GGG | + | chr2_1:67913328-67913347 | Msa0219930:intron | 20.0% |
!!! | CTAAAATTTTAAACTTTGCA+TGG | - | chr2_1:67913695-67913714 | None:intergenic | 20.0% |
!!! | TGCAAAGTTTAAAATTTTAG+AGG | + | chr2_1:67913695-67913714 | Msa0219930:intron | 20.0% |
!!! | TTTTGTACAAAACTATGAAA+CGG | + | chr2_1:67913892-67913911 | Msa0219930:intron | 20.0% |
!! | AAGTATATGTGTAGAATTTA+AGG | + | chr2_1:67914393-67914412 | Msa0219930:intron | 20.0% |
!! | AGTATATGTGTAGAATTTAA+GGG | + | chr2_1:67914394-67914413 | Msa0219930:intron | 20.0% |
!!! | ATCATTATCATTATTTTTGC+TGG | + | chr2_1:67914901-67914920 | Msa0219930:intron | 20.0% |
!! | TATCAAAACATGAAAAGAAA+AGG | - | chr2_1:67914983-67915002 | None:intergenic | 20.0% |
!! | CTCACATTCAAATATTATAT+GGG | + | chr2_1:67915380-67915399 | Msa0219930:CDS | 20.0% |
!! | CAAAAAATGATATATTTGAC+AGG | + | chr2_1:67915707-67915726 | Msa0219930:intron | 20.0% |
!! | AATGCTAAATTCAAATTGTT+AGG | + | chr2_1:67915766-67915785 | Msa0219930:intron | 20.0% |
!! | ATGCTAAATTCAAATTGTTA+GGG | + | chr2_1:67915767-67915786 | Msa0219930:intron | 20.0% |
!!! | AGTAATATATGGAAGTATTA+TGG | + | chr2_1:67915813-67915832 | Msa0219930:intron | 20.0% |
!! | GAATATGACAAATAACAATA+TGG | - | chr2_1:67916906-67916925 | None:intergenic | 20.0% |
!! | ATAAATAACAAGGTAAGTAT+GGG | - | chr2_1:67917152-67917171 | None:intergenic | 20.0% |
!! | TAAAAATTGTAAAAGTCCTA+AGG | - | chr2_1:67917580-67917599 | None:intergenic | 20.0% |
!!! | TTTATTGAGATTTTCATACA+TGG | - | chr2_1:67917617-67917636 | None:intergenic | 20.0% |
!! | ACTAAAATGATTACAAAGTA+TGG | - | chr2_1:67917883-67917902 | None:intergenic | 20.0% |
!! | AATCTTTAAATTTGGTCAAA+TGG | + | chr2_1:67917951-67917970 | Msa0219930:intron | 20.0% |
!!! | TTTTTCTAAATAGACAAAGA+TGG | - | chr2_1:67918355-67918374 | None:intergenic | 20.0% |
!! | AAATAGAAAAAGGAATATAC+TGG | + | chr2_1:67918547-67918566 | Msa0219930:intron | 20.0% |
!!! | TGTAAAAACATAATCTTTTC+TGG | - | chr2_1:67918965-67918984 | None:intergenic | 20.0% |
!! | AAAATTCAACAATGACTAAA+AGG | + | chr2_1:67919553-67919572 | Msa0219930:three_prime_UTR | 20.0% |
!! | TGATAGTATTGAAACTGTTA+TGG | + | chr2_1:67912246-67912265 | Msa0219930:CDS | 25.0% |
!! | TTACATTTTTATCACAACCA+GGG | - | chr2_1:67912303-67912322 | None:intergenic | 25.0% |
!! | TGAATGTATCTCTATGTTTT+TGG | + | chr2_1:67912330-67912349 | Msa0219930:intron | 25.0% |
! | ATTGATTGCTATGAAGTAAA+GGG | + | chr2_1:67913150-67913169 | Msa0219930:intron | 25.0% |
!!! | GATATGATTTTGTTTGAAGT+TGG | + | chr2_1:67913211-67913230 | Msa0219930:intron | 25.0% |
! | GAATAAAATTGATGTACTTC+AGG | + | chr2_1:67913327-67913346 | Msa0219930:intron | 25.0% |
! | ATAAAATTGATGTACTTCAG+GGG | + | chr2_1:67913329-67913348 | Msa0219930:intron | 25.0% |
!!! | TATGCACTTTTATTTACTCA+TGG | + | chr2_1:67913450-67913469 | Msa0219930:intron | 25.0% |
! | TTTGTACAAAACTATGAAAC+GGG | + | chr2_1:67913893-67913912 | Msa0219930:intron | 25.0% |
! | ACTTCAAAATTCAAAGAAGA+CGG | - | chr2_1:67914022-67914041 | None:intergenic | 25.0% |
!! | CATTTTCATCATTCTGTTTA+GGG | - | chr2_1:67914056-67914075 | None:intergenic | 25.0% |
! | AATTCAATTATTGCTACACA+TGG | - | chr2_1:67914126-67914145 | None:intergenic | 25.0% |
! | TAATGCAATGGTTATAGTTA+TGG | + | chr2_1:67914584-67914603 | Msa0219930:CDS | 25.0% |
!!! | CTTTTCATGTTTTGATAGAT+TGG | + | chr2_1:67914986-67915005 | Msa0219930:intron | 25.0% |
!! | TTTTCTATGATATGTGATTC+AGG | + | chr2_1:67915318-67915337 | Msa0219930:intron | 25.0% |
! | ATGTGATTCAGGAAATAATA+AGG | + | chr2_1:67915329-67915348 | Msa0219930:intron | 25.0% |
! | GCTCACATTCAAATATTATA+TGG | + | chr2_1:67915379-67915398 | Msa0219930:CDS | 25.0% |
! | TGTTAACATGATTATTCTAC+AGG | + | chr2_1:67915546-67915565 | Msa0219930:intron | 25.0% |
! | AGAAATACCTTAAAACTCAA+AGG | - | chr2_1:67915627-67915646 | None:intergenic | 25.0% |
!!! | GAGTTTTAGTGAGTAATATA+TGG | + | chr2_1:67915802-67915821 | Msa0219930:intron | 25.0% |
!!! | ACACTTTTCTTTAAGTTTGA+CGG | - | chr2_1:67916008-67916027 | None:intergenic | 25.0% |
! | TAAAAAACCAACAACAATGT+AGG | + | chr2_1:67916081-67916100 | Msa0219930:intron | 25.0% |
! | TTAAGCAAATAGGACATATA+TGG | + | chr2_1:67916228-67916247 | Msa0219930:intron | 25.0% |
! | CATATATGGATAATAACGAT+AGG | + | chr2_1:67916242-67916261 | Msa0219930:intron | 25.0% |
! | TCAAATCATTACAAGAGATA+CGG | + | chr2_1:67916419-67916438 | Msa0219930:intron | 25.0% |
!!! | AATTGAGTTCAGTTTTGTTT+TGG | - | chr2_1:67916495-67916514 | None:intergenic | 25.0% |
! | TATTTGTCATATTCGATTCA+TGG | + | chr2_1:67916912-67916931 | Msa0219930:intron | 25.0% |
! | ATTTGTCATATTCGATTCAT+GGG | + | chr2_1:67916913-67916932 | Msa0219930:intron | 25.0% |
! | TTTATGAATTATGGGTATAC+AGG | - | chr2_1:67917058-67917077 | None:intergenic | 25.0% |
! | CATAAATAACAAGGTAAGTA+TGG | - | chr2_1:67917153-67917172 | None:intergenic | 25.0% |
!!! | CATACTTACCTTGTTATTTA+TGG | + | chr2_1:67917151-67917170 | Msa0219930:intron | 25.0% |
!! | GTCTAAAACCATAAATAACA+AGG | - | chr2_1:67917162-67917181 | None:intergenic | 25.0% |
! | AAAAGGAAAATTTGATAGAG+AGG | - | chr2_1:67917370-67917389 | None:intergenic | 25.0% |
!! | TCTATCAAATTTTCCTTTTC+AGG | + | chr2_1:67917371-67917390 | Msa0219930:intron | 25.0% |
!! | CTATCAAATTTTCCTTTTCA+GGG | + | chr2_1:67917372-67917391 | Msa0219930:intron | 25.0% |
! | AGGTCAATTCATAGTAAAAA+TGG | - | chr2_1:67917560-67917579 | None:intergenic | 25.0% |
!! | TTTTACTATGAATTGACCTT+AGG | + | chr2_1:67917561-67917580 | Msa0219930:intron | 25.0% |
! | TCTACTAAAAAACTAATGAC+TGG | - | chr2_1:67917691-67917710 | None:intergenic | 25.0% |
! | TGAACTGCAATCTTTAAATT+TGG | + | chr2_1:67917943-67917962 | Msa0219930:intron | 25.0% |
! | GAGTGTGAACATAATAATTA+AGG | + | chr2_1:67918213-67918232 | Msa0219930:intron | 25.0% |
! | TAACAATTACTTCACAGAAT+AGG | - | chr2_1:67918324-67918343 | None:intergenic | 25.0% |
!! | AAAACATAATCTTTTCTGGA+AGG | - | chr2_1:67918961-67918980 | None:intergenic | 25.0% |
! | AACAAATTTGGTTAGATCAA+TGG | - | chr2_1:67919211-67919230 | None:intergenic | 25.0% |
!!! | AACCAAATTTGTTGTCTTTT+TGG | + | chr2_1:67919218-67919237 | Msa0219930:intron | 25.0% |
! | ATCCAAAAAGACAACAAATT+TGG | - | chr2_1:67919223-67919242 | None:intergenic | 25.0% |
!! | GCTTCACATTTTTAATATAC+TGG | - | chr2_1:67919246-67919265 | None:intergenic | 25.0% |
! | AAATAAACAAGAACAAAGAG+AGG | - | chr2_1:67919471-67919490 | None:intergenic | 25.0% |
! | TAACTGATACAACATTCTAT+TGG | - | chr2_1:67919502-67919521 | None:intergenic | 25.0% |
! | TGTATCAGTTAGTAATGAAA+AGG | + | chr2_1:67919511-67919530 | Msa0219930:three_prime_UTR | 25.0% |
!!! | CTAGCACATAAATTGATTTT+CGG | - | chr2_1:67919599-67919618 | None:intergenic | 25.0% |
!! | CTGTATTTGTTGAGTTTTGT+GGG | - | chr2_1:67911941-67911960 | None:intergenic | 30.0% |
!! | ACTGTATTTGTTGAGTTTTG+TGG | - | chr2_1:67911942-67911961 | None:intergenic | 30.0% |
CCAATAGTGTTAAACCTAAA+CGG | - | chr2_1:67912157-67912176 | None:intergenic | 30.0% | |
!! | TGTTAGTGATGCTATTTCTA+TGG | + | chr2_1:67912177-67912196 | Msa0219930:CDS | 30.0% |
!! | GTTAGTGATGCTATTTCTAT+GGG | + | chr2_1:67912178-67912197 | Msa0219930:CDS | 30.0% |
!! | TTAGTGATGCTATTTCTATG+GGG | + | chr2_1:67912179-67912198 | Msa0219930:CDS | 30.0% |
! | CTTACATTTTTATCACAACC+AGG | - | chr2_1:67912304-67912323 | None:intergenic | 30.0% |
!!! | TATATGGTTTTATAGATGCC+AGG | + | chr2_1:67912382-67912401 | Msa0219930:intron | 30.0% |
AAATTACTGAACTAATGAGC+TGG | + | chr2_1:67912493-67912512 | Msa0219930:intron | 30.0% | |
TGGAGAATTACATGTATGTT+TGG | + | chr2_1:67912576-67912595 | Msa0219930:intron | 30.0% | |
!!! | TACATGTATGTTTGGTTTTG+CGG | + | chr2_1:67912584-67912603 | Msa0219930:intron | 30.0% |
! | GTTTGACTTTAGTTATAACC+AGG | + | chr2_1:67912888-67912907 | Msa0219930:intron | 30.0% |
!! | GCATATATTGATTTGTGTGT+AGG | + | chr2_1:67913073-67913092 | Msa0219930:intron | 30.0% |
GATTGATTGCTATGAAGTAA+AGG | + | chr2_1:67913149-67913168 | Msa0219930:intron | 30.0% | |
CTATGAAGTAAAGGGTTATA+TGG | + | chr2_1:67913158-67913177 | Msa0219930:intron | 30.0% | |
AACATACAATGCAAGATTGA+AGG | - | chr2_1:67913392-67913411 | None:intergenic | 30.0% | |
TTGTACAAAACTATGAAACG+GGG | + | chr2_1:67913894-67913913 | Msa0219930:intron | 30.0% | |
TGACAATAAATACGCTTGTT+TGG | - | chr2_1:67913976-67913995 | None:intergenic | 30.0% | |
AACAAGCGTATTTATTGTCA+AGG | + | chr2_1:67913976-67913995 | Msa0219930:intron | 30.0% | |
! | CCATTTTCATCATTCTGTTT+AGG | - | chr2_1:67914057-67914076 | None:intergenic | 30.0% |
CCTAAACAGAATGATGAAAA+TGG | + | chr2_1:67914054-67914073 | Msa0219930:intron | 30.0% | |
ATCTATGGAGAATATGTAAG+TGG | + | chr2_1:67914236-67914255 | Msa0219930:CDS | 30.0% | |
TACACATATACTTACCTGTA+TGG | - | chr2_1:67914386-67914405 | None:intergenic | 30.0% | |
TAAGGATAAGCACACTAAAA+TGG | - | chr2_1:67914424-67914443 | None:intergenic | 30.0% | |
CCTGCAAAAATTATTACATG+AGG | - | chr2_1:67914714-67914733 | None:intergenic | 30.0% | |
! | CCTCATGTAATAATTTTTGC+AGG | + | chr2_1:67914711-67914730 | Msa0219930:intron | 30.0% |
! | AATAATTTTTGCAGGTCTGT+TGG | + | chr2_1:67914719-67914738 | Msa0219930:intron | 30.0% |
TGTTATGGAAGATGTTCATA+AGG | + | chr2_1:67914823-67914842 | Msa0219930:CDS | 30.0% | |
ATGAAAAGAAAAGGATCTTC+AGG | - | chr2_1:67914974-67914993 | None:intergenic | 30.0% | |
!!! | TTCATGTTTTGATAGATTGG+AGG | + | chr2_1:67914989-67915008 | Msa0219930:intron | 30.0% |
!!! | TCATGTTTTGATAGATTGGA+GGG | + | chr2_1:67914990-67915009 | Msa0219930:intron | 30.0% |
!!! | TTAGTGATGTGCATGTTTTT+TGG | - | chr2_1:67915119-67915138 | None:intergenic | 30.0% |
ACAATCAAGCAGTTGTAATT+GGG | - | chr2_1:67915266-67915285 | None:intergenic | 30.0% | |
AACAATCAAGCAGTTGTAAT+TGG | - | chr2_1:67915267-67915286 | None:intergenic | 30.0% | |
GTTCTGTTGCTAAAATTACT+GGG | + | chr2_1:67915419-67915438 | Msa0219930:CDS | 30.0% | |
AGTATTATGGAATGAGAAAG+TGG | + | chr2_1:67915826-67915845 | Msa0219930:intron | 30.0% | |
GTATTATGGAATGAGAAAGT+GGG | + | chr2_1:67915827-67915846 | Msa0219930:intron | 30.0% | |
AAAATGACATAGAGATCACT+TGG | + | chr2_1:67915867-67915886 | Msa0219930:intron | 30.0% | |
ATAAGATGGATGTTAACCAT+TGG | + | chr2_1:67915921-67915940 | Msa0219930:intron | 30.0% | |
!! | CACTTTTCTTTAAGTTTGAC+GGG | - | chr2_1:67916007-67916026 | None:intergenic | 30.0% |
GTTATATACGATTAAATGCC+AGG | + | chr2_1:67916055-67916074 | Msa0219930:intron | 30.0% | |
TATTCCAATGCTAGAAGTAA+TGG | + | chr2_1:67916376-67916395 | Msa0219930:intron | 30.0% | |
ATTCCAATGCTAGAAGTAAT+GGG | + | chr2_1:67916377-67916396 | Msa0219930:intron | 30.0% | |
!!! | TTTTTTTTTGGCATAGATCG+CGG | + | chr2_1:67916532-67916551 | Msa0219930:intron | 30.0% |
TTCGAAAATAAACACTCTAG+AGG | + | chr2_1:67916718-67916737 | Msa0219930:intron | 30.0% | |
!!! | TTCAATGGTGATTTTGACTT+GGG | - | chr2_1:67916746-67916765 | None:intergenic | 30.0% |
!!! | TTTCAATGGTGATTTTGACT+TGG | - | chr2_1:67916747-67916766 | None:intergenic | 30.0% |
!! | AGCAGAATGTTTGTTTTCAA+TGG | - | chr2_1:67916761-67916780 | None:intergenic | 30.0% |
TAAGTAAAGAAGAACAGAAG+AGG | - | chr2_1:67916877-67916896 | None:intergenic | 30.0% | |
TCGAGATTCAAATCATGAAT+CGG | - | chr2_1:67916955-67916974 | None:intergenic | 30.0% | |
TGAATCTCGATAACATGATT+TGG | + | chr2_1:67916965-67916984 | Msa0219930:intron | 30.0% | |
TGGATTTCTACGATAAGATA+TGG | + | chr2_1:67916985-67917004 | Msa0219930:intron | 30.0% | |
! | TTTTGCTAAGCATGACAAAT+GGG | - | chr2_1:67917129-67917148 | None:intergenic | 30.0% |
AATGTTTCCTTATCAAACTG+TGG | + | chr2_1:67917207-67917226 | Msa0219930:intron | 30.0% | |
AAGAAATCAATACAGTGACA+AGG | - | chr2_1:67917294-67917313 | None:intergenic | 30.0% | |
AGGGAAAAGTGGTTATAATT+AGG | + | chr2_1:67917391-67917410 | Msa0219930:intron | 30.0% | |
GGGAAAAGTGGTTATAATTA+GGG | + | chr2_1:67917392-67917411 | Msa0219930:intron | 30.0% | |
GGAAAAGTGGTTATAATTAG+GGG | + | chr2_1:67917393-67917412 | Msa0219930:CDS | 30.0% | |
AGAACATCTTTCTACAAACA+TGG | - | chr2_1:67917668-67917687 | None:intergenic | 30.0% | |
! | GGTTTTCAAAGCTTGAAAAA+AGG | - | chr2_1:67917724-67917743 | None:intergenic | 30.0% |
! | TAAGAAATGTCACTTCATCA+TGG | - | chr2_1:67917745-67917764 | None:intergenic | 30.0% |
TGATGAAGTGACATTTCTTA+AGG | + | chr2_1:67917745-67917764 | Msa0219930:intron | 30.0% | |
TAAATTTGGTCAAATGGTGT+TGG | + | chr2_1:67917957-67917976 | Msa0219930:intron | 30.0% | |
! | ATGAGCAGAAGAAATTTTCT+AGG | - | chr2_1:67918083-67918102 | None:intergenic | 30.0% |
TAGAAAATTTCTTCTGCTCA+TGG | + | chr2_1:67918082-67918101 | Msa0219930:intron | 30.0% | |
TCTTGAAAAACAATCTATCG+TGG | + | chr2_1:67918147-67918166 | Msa0219930:intron | 30.0% | |
! | TTCAAGCTATTCTTTTGTAG+TGG | + | chr2_1:67918415-67918434 | Msa0219930:intron | 30.0% |
! | TCAAGCTATTCTTTTGTAGT+GGG | + | chr2_1:67918416-67918435 | Msa0219930:intron | 30.0% |
ACCAGGTGAGTTTATTATAT+TGG | + | chr2_1:67918451-67918470 | Msa0219930:intron | 30.0% | |
ACCAATATAATAAACTCACC+TGG | - | chr2_1:67918455-67918474 | None:intergenic | 30.0% | |
!! | TGAAGATAATGTTGCTTTAC+TGG | + | chr2_1:67918484-67918503 | Msa0219930:intron | 30.0% |
TAGAAAAAGGAATATACTGG+AGG | + | chr2_1:67918550-67918569 | Msa0219930:intron | 30.0% | |
! | AAGTGTAAATCCAATTTTCC+TGG | - | chr2_1:67918601-67918620 | None:intergenic | 30.0% |
ATGTATTTACTCTATCGAGA+TGG | + | chr2_1:67918685-67918704 | Msa0219930:intron | 30.0% | |
ATCTCAAGTGTAGTTTAATG+TGG | + | chr2_1:67918719-67918738 | Msa0219930:intron | 30.0% | |
GAAGCACGTAGAAATATTAA+TGG | - | chr2_1:67918749-67918768 | None:intergenic | 30.0% | |
CTCATTTATCATTATCCACA+AGG | - | chr2_1:67919163-67919182 | None:intergenic | 30.0% | |
TCAATGGAAGAATTAACTAG+AGG | - | chr2_1:67919195-67919214 | None:intergenic | 30.0% | |
ACAAATAATCGAATTTCGCT+CGG | - | chr2_1:67919325-67919344 | None:intergenic | 30.0% | |
!! | GTATAAGTAGCATTTTGATG+AGG | + | chr2_1:67919343-67919362 | Msa0219930:three_prime_UTR | 30.0% |
ACAACATTCTATTGGTACAA+TGG | - | chr2_1:67919494-67919513 | None:intergenic | 30.0% | |
TCAGTTAGTAATGAAAAGGT+TGG | + | chr2_1:67919515-67919534 | Msa0219930:three_prime_UTR | 30.0% | |
! | TCATTGTTGAATTTTTGCCA+AGG | - | chr2_1:67919548-67919567 | None:intergenic | 30.0% |
TTAGGAATAGGAGTAGTAGT+AGG | - | chr2_1:67911733-67911752 | None:intergenic | 35.0% | |
!!! | GACTTGTGGCTTTTTTAAGT+CGG | - | chr2_1:67912035-67912054 | None:intergenic | 35.0% |
GACTTAAAAAAGCCACAAGT+CGG | + | chr2_1:67912034-67912053 | Msa0219930:CDS | 35.0% | |
AAACCTAAACGGAATCATAC+CGG | - | chr2_1:67912146-67912165 | None:intergenic | 35.0% | |
! | CCGTTTAGGTTTAACACTAT+TGG | + | chr2_1:67912154-67912173 | Msa0219930:CDS | 35.0% |
CCACCATAAACCATAATACT+CGG | - | chr2_1:67912439-67912458 | None:intergenic | 35.0% | |
CGAGTATTATGGTTTATGGT+GGG | + | chr2_1:67912437-67912456 | Msa0219930:CDS | 35.0% | |
! | GTCTAAACGTGATTTGTGTT+TGG | + | chr2_1:67912651-67912670 | Msa0219930:intron | 35.0% |
! | TACACTGCTACAATCAGTTT+TGG | + | chr2_1:67912829-67912848 | Msa0219930:intron | 35.0% |
TGTATGTTTGATTCCGCATT+TGG | - | chr2_1:67912860-67912879 | None:intergenic | 35.0% | |
! | ACCTCATATGCACTTTTCTT+TGG | + | chr2_1:67913015-67913034 | Msa0219930:intron | 35.0% |
! | CCTCATATGCACTTTTCTTT+GGG | + | chr2_1:67913016-67913035 | Msa0219930:intron | 35.0% |
!! | ATATTGATTTGTGTGTAGGC+AGG | + | chr2_1:67913077-67913096 | Msa0219930:intron | 35.0% |
!! | TATTGATTTGTGTGTAGGCA+GGG | + | chr2_1:67913078-67913097 | Msa0219930:intron | 35.0% |
ATACATATCATCCACACAAG+TGG | - | chr2_1:67913253-67913272 | None:intergenic | 35.0% | |
GTGCATAAATGTCACATGAA+AGG | - | chr2_1:67913437-67913456 | None:intergenic | 35.0% | |
TAACTACCAGGATTGGAAAT+TGG | - | chr2_1:67913507-67913526 | None:intergenic | 35.0% | |
TGAAGATTAACTACCAGGAT+TGG | - | chr2_1:67913514-67913533 | None:intergenic | 35.0% | |
CAGAATGAAGATTAACTACC+AGG | - | chr2_1:67913519-67913538 | None:intergenic | 35.0% | |
!!! | TTCTGTTATTTTTTCCAGCC+TGG | + | chr2_1:67913534-67913553 | Msa0219930:intron | 35.0% |
TTCATTAACTGTGAAGAGCT+AGG | - | chr2_1:67913755-67913774 | None:intergenic | 35.0% | |
! | GAGAACTTTTAACGCTTGTT+TGG | + | chr2_1:67913812-67913831 | Msa0219930:intron | 35.0% |
AATGTATACAGCCAATACCA+TGG | + | chr2_1:67914328-67914347 | Msa0219930:CDS | 35.0% | |
GCTACAGAAAACAACACATA+AGG | - | chr2_1:67914442-67914461 | None:intergenic | 35.0% | |
GTTAGCTGGTAAATATCTTC+TGG | + | chr2_1:67914506-67914525 | Msa0219930:CDS | 35.0% | |
!! | TCTTCTGGAGTTATTGAAGA+TGG | + | chr2_1:67914521-67914540 | Msa0219930:CDS | 35.0% |
ATTTGCGAGTGATGATATCT+CGG | - | chr2_1:67914557-67914576 | None:intergenic | 35.0% | |
CAAATCACTACGTAATGCAA+TGG | + | chr2_1:67914572-67914591 | Msa0219930:CDS | 35.0% | |
ATGGTTATAGTTATGGCACT+TGG | + | chr2_1:67914591-67914610 | Msa0219930:CDS | 35.0% | |
TGGTTATAGTTATGGCACTT+GGG | + | chr2_1:67914592-67914611 | Msa0219930:CDS | 35.0% | |
AATTAAGTGCAACACAGCAT+TGG | - | chr2_1:67914625-67914644 | None:intergenic | 35.0% | |
! | GACTCTAGATGATTTTCAGA+AGG | + | chr2_1:67914751-67914770 | Msa0219930:CDS | 35.0% |
! | GGTTTAAGATCAGCAATGAA+AGG | - | chr2_1:67914791-67914810 | None:intergenic | 35.0% |
ATTGCTGATCTTAAACCAAG+TGG | + | chr2_1:67914794-67914813 | Msa0219930:CDS | 35.0% | |
TTGCTGATCTTAAACCAAGT+GGG | + | chr2_1:67914795-67914814 | Msa0219930:CDS | 35.0% | |
ACCAAGTGGGAAATATGTTA+TGG | + | chr2_1:67914808-67914827 | Msa0219930:CDS | 35.0% | |
TCCATAACATATTTCCCACT+TGG | - | chr2_1:67914812-67914831 | None:intergenic | 35.0% | |
! | ATTTTTGCTGGTCATGCTTT+CGG | + | chr2_1:67914913-67914932 | Msa0219930:intron | 35.0% |
ATACTGTCATCAACACACAA+AGG | - | chr2_1:67915089-67915108 | None:intergenic | 35.0% | |
! | AAGTTCTGCATTTTCAGCTA+GGG | - | chr2_1:67915176-67915195 | None:intergenic | 35.0% |
! | AAAGTTCTGCATTTTCAGCT+AGG | - | chr2_1:67915177-67915196 | None:intergenic | 35.0% |
!! | CTTGTTGTTTCTGTTCCATA+TGG | + | chr2_1:67915227-67915246 | Msa0219930:intron | 35.0% |
CAATCAAGCAGTTGTAATTG+GGG | - | chr2_1:67915265-67915284 | None:intergenic | 35.0% | |
! | TTCTTGATGGGATTTTCAGT+TGG | - | chr2_1:67915355-67915374 | None:intergenic | 35.0% |
GGTTCTGTTGCTAAAATTAC+TGG | + | chr2_1:67915418-67915437 | Msa0219930:CDS | 35.0% | |
TGCTAAAATTACTGGGAAAG+AGG | + | chr2_1:67915426-67915445 | Msa0219930:CDS | 35.0% | |
GCTAAAATTACTGGGAAAGA+GGG | + | chr2_1:67915427-67915446 | Msa0219930:CDS | 35.0% | |
!!! | ACCTTCTTATGCTGTTTTCT+TGG | + | chr2_1:67915468-67915487 | Msa0219930:intron | 35.0% |
TCCAAGAAAACAGCATAAGA+AGG | - | chr2_1:67915472-67915491 | None:intergenic | 35.0% | |
!! | AGAGGATCCTTTGAGTTTTA+AGG | + | chr2_1:67915617-67915636 | Msa0219930:CDS | 35.0% |
TACTGTCAAGAGATTCAAGA+CGG | + | chr2_1:67915667-67915686 | Msa0219930:intron | 35.0% | |
TAGAGATCACTTGGTATAGT+AGG | + | chr2_1:67915876-67915895 | Msa0219930:intron | 35.0% | |
AGAGATCACTTGGTATAGTA+GGG | + | chr2_1:67915877-67915896 | Msa0219930:intron | 35.0% | |
TAGGGTGAATGTTAAACGAA+GGG | + | chr2_1:67915895-67915914 | Msa0219930:intron | 35.0% | |
GGCTATAAATTGTGCTTGAA+AGG | + | chr2_1:67915979-67915998 | Msa0219930:intron | 35.0% | |
ATATACGATTAAATGCCAGG+TGG | + | chr2_1:67916058-67916077 | Msa0219930:intron | 35.0% | |
TGCAAATCCTACATTGTTGT+TGG | - | chr2_1:67916091-67916110 | None:intergenic | 35.0% | |
AGACACTGCTATCTTACAAT+TGG | - | chr2_1:67916204-67916223 | None:intergenic | 35.0% | |
GTGTCTTGTCTTAAGCAAAT+AGG | + | chr2_1:67916218-67916237 | Msa0219930:intron | 35.0% | |
ATAACGATAGGTACTTCACA+AGG | + | chr2_1:67916254-67916273 | Msa0219930:intron | 35.0% | |
!! | TAGAAGTATTGGGACATGTA+TGG | + | chr2_1:67916307-67916326 | Msa0219930:intron | 35.0% |
CATGTATGGAGAATAACCAT+AGG | + | chr2_1:67916321-67916340 | Msa0219930:intron | 35.0% | |
ATAACCATAGGAACATCACA+AGG | + | chr2_1:67916333-67916352 | Msa0219930:intron | 35.0% | |
TGAGTGAATCATGAGATTCA+GGG | - | chr2_1:67916594-67916613 | None:intergenic | 35.0% | |
AGAATGCAAAAACAACCCTT+TGG | - | chr2_1:67916677-67916696 | None:intergenic | 35.0% | |
TGAAAACAAACATTCTGCTG+CGG | + | chr2_1:67916762-67916781 | Msa0219930:intron | 35.0% | |
ATAAGATATGGTTCATTGCC+TGG | + | chr2_1:67916997-67917016 | Msa0219930:intron | 35.0% | |
TAAGATATGGTTCATTGCCT+GGG | + | chr2_1:67916998-67917017 | Msa0219930:intron | 35.0% | |
!! | GCAAAAGTACTTGTACACAT+GGG | + | chr2_1:67917024-67917043 | Msa0219930:intron | 35.0% |
TTTGCTAAGCATGACAAATG+GGG | - | chr2_1:67917128-67917147 | None:intergenic | 35.0% | |
! | GTTTTGCTAAGCATGACAAA+TGG | - | chr2_1:67917130-67917149 | None:intergenic | 35.0% |
AGAAACTCCACAGTTTGATA+AGG | - | chr2_1:67917217-67917236 | None:intergenic | 35.0% | |
ACAGATATAACCGCAGTAAA+TGG | + | chr2_1:67917318-67917337 | Msa0219930:intron | 35.0% | |
! | CATTTAGTTGCCATTTACTG+CGG | - | chr2_1:67917331-67917350 | None:intergenic | 35.0% |
!! | TTTTCCTTTTCAGGGAAAAG+TGG | + | chr2_1:67917380-67917399 | Msa0219930:intron | 35.0% |
!! | ATAACCACTTTTCCCTGAAA+AGG | - | chr2_1:67917387-67917406 | None:intergenic | 35.0% |
AACACCAACAAGTGCAATAA+TGG | + | chr2_1:67917455-67917474 | Msa0219930:CDS | 35.0% | |
ACACCAACAAGTGCAATAAT+GGG | + | chr2_1:67917456-67917475 | Msa0219930:CDS | 35.0% | |
TCAAGAACAAGCAGCTATTT+AGG | - | chr2_1:67918173-67918192 | None:intergenic | 35.0% | |
GAATTCCTTAGCAATGATGT+TGG | + | chr2_1:67918191-67918210 | Msa0219930:intron | 35.0% | |
ATGCACAACACATTGTTCTA+AGG | - | chr2_1:67918287-67918306 | None:intergenic | 35.0% | |
TTAATGCATTCAAGTGCACT+TGG | - | chr2_1:67918393-67918412 | None:intergenic | 35.0% | |
GAAAAGTTCTCCAGGAAAAT+TGG | + | chr2_1:67918588-67918607 | Msa0219930:intron | 35.0% | |
TACACTTCACTATGTTGAAG+AGG | + | chr2_1:67918614-67918633 | Msa0219930:intron | 35.0% | |
ACGTGCTTCTTTGATTGTAT+AGG | + | chr2_1:67918760-67918779 | Msa0219930:intron | 35.0% | |
GCTTCTTTGATTGTATAGGA+AGG | + | chr2_1:67918764-67918783 | Msa0219930:intron | 35.0% | |
TCTTTGATTGTATAGGAAGG+CGG | + | chr2_1:67918767-67918786 | Msa0219930:intron | 35.0% | |
! | CCATTTTGAACCAAACCAAT+TGG | - | chr2_1:67918794-67918813 | None:intergenic | 35.0% |
!! | CCAATTGGTTTGGTTCAAAA+TGG | + | chr2_1:67918791-67918810 | Msa0219930:CDS | 35.0% |
!!! | CGATGTTTTAGTTTCAGATG+AGG | + | chr2_1:67918850-67918869 | Msa0219930:CDS | 35.0% |
! | TTTAGTTTCAGATGAGGAGA+TGG | + | chr2_1:67918856-67918875 | Msa0219930:CDS | 35.0% |
!! | ACTCCTTGATTAGCTTTGTA+TGG | - | chr2_1:67918911-67918930 | None:intergenic | 35.0% |
TAATCAAGGAGTTCTGTACA+AGG | + | chr2_1:67918919-67918938 | Msa0219930:CDS | 35.0% | |
!! | ACATAATCTTTTCTGGAAGG+AGG | - | chr2_1:67918958-67918977 | None:intergenic | 35.0% |
TGAGAATGGATCTTCTTTAG+CGG | + | chr2_1:67918992-67919011 | Msa0219930:intron | 35.0% | |
TAATTCAAAGGCTCTGCAAT+AGG | + | chr2_1:67919083-67919102 | Msa0219930:intron | 35.0% | |
! | GAGTAGAGAGGACATATTTT+TGG | + | chr2_1:67919292-67919311 | Msa0219930:exon | 35.0% |
!!! | TAGAGAGGACATATTTTTGG+TGG | + | chr2_1:67919295-67919314 | Msa0219930:exon | 35.0% |
CAAGATGCATATAAATGCAC+CGG | - | chr2_1:67919388-67919407 | None:intergenic | 35.0% | |
TAAACAAGAACAAAGAGAGG+AGG | - | chr2_1:67919468-67919487 | None:intergenic | 35.0% | |
! | AAAAGGTTGGATTGATTCCT+TGG | + | chr2_1:67919528-67919547 | Msa0219930:three_prime_UTR | 35.0% |
AGTAGGTAGTGAGTGTAAGA+AGG | - | chr2_1:67911716-67911735 | None:intergenic | 40.0% | |
! | CGGAAAATGGGTTTAGGAAT+AGG | - | chr2_1:67911745-67911764 | None:intergenic | 40.0% |
AAGAGAGTTGACTGCATTGT+TGG | - | chr2_1:67911818-67911837 | None:intergenic | 40.0% | |
! | GGTTGAGATGGAGGATTTTA+CGG | - | chr2_1:67911900-67911919 | None:intergenic | 40.0% |
!!! | TGGCTTTTTTAAGTCGGCAT+CGG | - | chr2_1:67912029-67912048 | None:intergenic | 40.0% |
CAAACTATAACACATCCCTC+TGG | - | chr2_1:67912206-67912225 | None:intergenic | 40.0% | |
CCAGGTACGATTATTGCAAT+GGG | + | chr2_1:67912400-67912419 | Msa0219930:CDS | 40.0% | |
GTACGATTATTGCAATGGGA+CGG | + | chr2_1:67912404-67912423 | Msa0219930:CDS | 40.0% | |
CCGAGTATTATGGTTTATGG+TGG | + | chr2_1:67912436-67912455 | Msa0219930:CDS | 40.0% | |
! | GGTTTATGGTGGGACTATTA+AGG | + | chr2_1:67912447-67912466 | Msa0219930:CDS | 40.0% |
! | ATGGTGGGACTATTAAGGTA+TGG | + | chr2_1:67912452-67912471 | Msa0219930:intron | 40.0% |
!!! | AGTTTTGGCTTCTCCAAATG+CGG | + | chr2_1:67912844-67912863 | Msa0219930:intron | 40.0% |
TACATGTGTGACTTTAGACC+TGG | - | chr2_1:67912909-67912928 | None:intergenic | 40.0% | |
! | GATTGACTTTGATCTGCTGA+CGG | + | chr2_1:67912930-67912949 | Msa0219930:intron | 40.0% |
! | CCCAAAGAAAAGTGCATATG+AGG | - | chr2_1:67913019-67913038 | None:intergenic | 40.0% |
!! | TATGCACTTTTCTTTGGGAG+TGG | + | chr2_1:67913021-67913040 | Msa0219930:intron | 40.0% |
CGATAATTGTACCACTTGTG+TGG | + | chr2_1:67913239-67913258 | Msa0219930:intron | 40.0% | |
GATGTACTTCAGGGGATATT+TGG | + | chr2_1:67913337-67913356 | Msa0219930:intron | 40.0% | |
CAATGCAAGATTGAAGGTGA+TGG | - | chr2_1:67913386-67913405 | None:intergenic | 40.0% | |
GTGTTTCCAATTTCCAATCC+TGG | + | chr2_1:67913498-67913517 | Msa0219930:intron | 40.0% | |
!! | TTGGTTTTCCTGCAGATCTA+TGG | + | chr2_1:67914221-67914240 | Msa0219930:intron | 40.0% |
CATATTCTCCATAGATCTGC+AGG | - | chr2_1:67914232-67914251 | None:intergenic | 40.0% | |
TTGTCTGTGCTCATCACTAA+TGG | - | chr2_1:67914264-67914283 | None:intergenic | 40.0% | |
TATTGCAGAAGCCATGGTAT+TGG | - | chr2_1:67914342-67914361 | None:intergenic | 40.0% | |
GCTTCTGCAATAGAAGCTAT+GGG | + | chr2_1:67914350-67914369 | Msa0219930:CDS | 40.0% | |
CACTAAAGTTGGATGAGTGT+CGG | + | chr2_1:67914484-67914503 | Msa0219930:CDS | 40.0% | |
TTTGCGAGTGATGATATCTC+GGG | - | chr2_1:67914556-67914575 | None:intergenic | 40.0% | |
GGTTATAGTTATGGCACTTG+GGG | + | chr2_1:67914593-67914612 | Msa0219930:CDS | 40.0% | |
GTTATAGTTATGGCACTTGG+GGG | + | chr2_1:67914594-67914613 | Msa0219930:CDS | 40.0% | |
TTAGATGGTGACTGTATGAC+TGG | + | chr2_1:67915052-67915071 | Msa0219930:CDS | 40.0% | |
TATTTCTCCTCTCTAGTCAC+TGG | + | chr2_1:67915145-67915164 | Msa0219930:intron | 40.0% | |
GGGAGTCTTACATAACCATA+TGG | - | chr2_1:67915245-67915264 | None:intergenic | 40.0% | |
ATGTGAGCTGTCTTCTTGAT+GGG | - | chr2_1:67915367-67915386 | None:intergenic | 40.0% | |
AATGTGAGCTGTCTTCTTGA+TGG | - | chr2_1:67915368-67915387 | None:intergenic | 40.0% | |
!! | ATTTTAGCAACAGAACCCTG+TGG | - | chr2_1:67915415-67915434 | None:intergenic | 40.0% |
TCTCCTTCAAAAACAAGTGC+GGG | - | chr2_1:67915573-67915592 | None:intergenic | 40.0% | |
CTCTCCTTCAAAAACAAGTG+CGG | - | chr2_1:67915574-67915593 | None:intergenic | 40.0% | |
!!! | ACTTGTTTTTGAAGGAGAGG+AGG | + | chr2_1:67915575-67915594 | Msa0219930:CDS | 40.0% |
! | AATGATTGCTGCCATTTCAG+AGG | + | chr2_1:67915599-67915618 | Msa0219930:CDS | 40.0% |
! | ACTCAAAGGATCCTCTGAAA+TGG | - | chr2_1:67915613-67915632 | None:intergenic | 40.0% |
TATGGAATGAGAAAGTGGGT+TGG | + | chr2_1:67915831-67915850 | Msa0219930:intron | 40.0% | |
! | ATGGAATGAGAAAGTGGGTT+GGG | + | chr2_1:67915832-67915851 | Msa0219930:intron | 40.0% |
GTAGGGTGAATGTTAAACGA+AGG | + | chr2_1:67915894-67915913 | Msa0219930:intron | 40.0% | |
AGGGTGAATGTTAAACGAAG+GGG | + | chr2_1:67915896-67915915 | Msa0219930:intron | 40.0% | |
TAAACGAAGGGGAGATAAGA+TGG | + | chr2_1:67915907-67915926 | Msa0219930:intron | 40.0% | |
GTTAACCATTGGATCCAAGT+AGG | + | chr2_1:67915932-67915951 | Msa0219930:intron | 40.0% | |
TCCAAGTAGGATGGATGAAA+TGG | + | chr2_1:67915945-67915964 | Msa0219930:intron | 40.0% | |
CCAAGTAGGATGGATGAAAT+GGG | + | chr2_1:67915946-67915965 | Msa0219930:intron | 40.0% | |
CAAGTAGGATGGATGAAATG+GGG | + | chr2_1:67915947-67915966 | Msa0219930:intron | 40.0% | |
AAGTAGGATGGATGAAATGG+GGG | + | chr2_1:67915948-67915967 | Msa0219930:intron | 40.0% | |
!!! | GTTGTTGGTTTTTTACCACC+TGG | - | chr2_1:67916076-67916095 | None:intergenic | 40.0% |
AGAATGCTGTGATAGATGAG+TGG | + | chr2_1:67916122-67916141 | Msa0219930:intron | 40.0% | |
GAATGCTGTGATAGATGAGT+GGG | + | chr2_1:67916123-67916142 | Msa0219930:intron | 40.0% | |
CACCAAAAGTAGATGGGATT+GGG | + | chr2_1:67916146-67916165 | Msa0219930:intron | 40.0% | |
! | TTCCCAATCCCATCTACTTT+TGG | - | chr2_1:67916151-67916170 | None:intergenic | 40.0% |
GGGATTGGGAATGAAATCAT+TGG | + | chr2_1:67916160-67916179 | Msa0219930:intron | 40.0% | |
!! | AGTCCAGAGCTAGAAGTATT+GGG | + | chr2_1:67916297-67916316 | Msa0219930:intron | 40.0% |
TCTCCCATTACTTCTAGCAT+TGG | - | chr2_1:67916383-67916402 | None:intergenic | 40.0% | |
! | CTAGAAGTAATGGGAGACTA+AGG | + | chr2_1:67916386-67916405 | Msa0219930:intron | 40.0% |
ATTACAAGAGATACGGAGCA+TGG | + | chr2_1:67916426-67916445 | Msa0219930:intron | 40.0% | |
GACTCATTCACATGTATCGT+GGG | - | chr2_1:67916462-67916481 | None:intergenic | 40.0% | |
GAGTGAATCATGAGATTCAG+GGG | - | chr2_1:67916593-67916612 | None:intergenic | 40.0% | |
GTGAGTGAATCATGAGATTC+AGG | - | chr2_1:67916595-67916614 | None:intergenic | 40.0% | |
GAAAACAAACATTCTGCTGC+GGG | + | chr2_1:67916763-67916782 | Msa0219930:intron | 40.0% | |
AAAAAAGACGCACAGTAGGA+AGG | - | chr2_1:67916811-67916830 | None:intergenic | 40.0% | |
ATGGAAAAAAGACGCACAGT+AGG | - | chr2_1:67916815-67916834 | None:intergenic | 40.0% | |
AAAACACTATGTAGGCAGGA+TGG | - | chr2_1:67916834-67916853 | None:intergenic | 40.0% | |
!! | GGCAAAAGTACTTGTACACA+TGG | + | chr2_1:67917023-67917042 | Msa0219930:intron | 40.0% |
AGCATGACAAATGGGGTAAA+GGG | - | chr2_1:67917121-67917140 | None:intergenic | 40.0% | |
AAGCATGACAAATGGGGTAA+AGG | - | chr2_1:67917122-67917141 | None:intergenic | 40.0% | |
ACAGTGACAAGGATGTGAAA+TGG | - | chr2_1:67917283-67917302 | None:intergenic | 40.0% | |
AGTGGTTATAATTAGGGGAG+AGG | + | chr2_1:67917398-67917417 | Msa0219930:CDS | 40.0% | |
GTGGTTATAATTAGGGGAGA+GGG | + | chr2_1:67917399-67917418 | Msa0219930:CDS | 40.0% | |
TGGTTATAATTAGGGGAGAG+GGG | + | chr2_1:67917400-67917419 | Msa0219930:CDS | 40.0% | |
!! | CTTGTTGGTGTTAACATCTC+AGG | - | chr2_1:67917447-67917466 | None:intergenic | 40.0% |
ATATTGTCTTTCGATACCGC+AGG | + | chr2_1:67917768-67917787 | Msa0219930:intron | 40.0% | |
GTCAATAAAGCAACATCCTG+CGG | - | chr2_1:67917787-67917806 | None:intergenic | 40.0% | |
!! | GATGTTGCTTTATTGACCGA+CGG | + | chr2_1:67917790-67917809 | Msa0219930:CDS | 40.0% |
TTTCATAGAACCAGCTGCTT+TGG | + | chr2_1:67918123-67918142 | Msa0219930:intron | 40.0% | |
!! | TTTTCAAGAACCAAAGCAGC+TGG | - | chr2_1:67918136-67918155 | None:intergenic | 40.0% |
ACACTCCAACATCATTGCTA+AGG | - | chr2_1:67918199-67918218 | None:intergenic | 40.0% | |
! | CTGGAGAACTTTTCAGTTCT+TGG | - | chr2_1:67918582-67918601 | None:intergenic | 40.0% |
CAAGAACTGAAAAGTTCTCC+AGG | + | chr2_1:67918580-67918599 | Msa0219930:intron | 40.0% | |
ACTCTATCGAGATGGAGATT+AGG | + | chr2_1:67918693-67918712 | Msa0219930:intron | 40.0% | |
!! | CCTTGATTAGCTTTGTATGG+TGG | - | chr2_1:67918908-67918927 | None:intergenic | 40.0% |
CCACCATACAAAGCTAATCA+AGG | + | chr2_1:67918905-67918924 | Msa0219930:CDS | 40.0% | |
!! | TCTTTTCTGGAAGGAGGTTT+TGG | - | chr2_1:67918952-67918971 | None:intergenic | 40.0% |
GATCTTCTTTAGCGGTTACA+TGG | + | chr2_1:67919000-67919019 | Msa0219930:intron | 40.0% | |
TTAATTCAACAGCACTGCAG+CGG | - | chr2_1:67919032-67919051 | None:intergenic | 40.0% | |
!!! | TATTGCTGTTTTCGCTCAAC+CGG | + | chr2_1:67919366-67919385 | Msa0219930:three_prime_UTR | 40.0% |
AGAGTTGACTGCATTGTTGG+TGG | - | chr2_1:67911815-67911834 | None:intergenic | 45.0% | |
! | GTTTTGTGGGTTCAGTGGAA+GGG | - | chr2_1:67911928-67911947 | None:intergenic | 45.0% |
!! | AGTTTTGTGGGTTCAGTGGA+AGG | - | chr2_1:67911929-67911948 | None:intergenic | 45.0% |
!! | GTTGAGTTTTGTGGGTTCAG+TGG | - | chr2_1:67911933-67911952 | None:intergenic | 45.0% |
!!! | GGATTTTGGTTCGGTGATTC+GGG | - | chr2_1:67911966-67911985 | None:intergenic | 45.0% |
!!! | GGGATTTTGGTTCGGTGATT+CGG | - | chr2_1:67911967-67911986 | None:intergenic | 45.0% |
ATCACCGAACCAAAATCCCA+AGG | + | chr2_1:67911968-67911987 | Msa0219930:CDS | 45.0% | |
GCATCACAAGCAATCCTCTA+CGG | + | chr2_1:67911992-67912011 | Msa0219930:CDS | 45.0% | |
ATGGAGGAGATGCATATTGC+AGG | - | chr2_1:67912089-67912108 | None:intergenic | 45.0% | |
CTTTAACAGCTTCGGAGAGA+TGG | - | chr2_1:67912108-67912127 | None:intergenic | 45.0% | |
CTCTCCGAAGCTGTTAAAGA+AGG | + | chr2_1:67912109-67912128 | Msa0219930:CDS | 45.0% | |
GACGCCTTCTTTAACAGCTT+CGG | - | chr2_1:67912116-67912135 | None:intergenic | 45.0% | |
!! | AAACGGAATCATACCGGCTT+CGG | - | chr2_1:67912140-67912159 | None:intergenic | 45.0% |
AAGCCGGTATGATTCCGTTT+AGG | + | chr2_1:67912140-67912159 | Msa0219930:CDS | 45.0% | |
!! | CTATTTCTATGGGGACCAGA+GGG | + | chr2_1:67912188-67912207 | Msa0219930:CDS | 45.0% |
AAACTGTTATGGCTGCTCAG+TGG | + | chr2_1:67912257-67912276 | Msa0219930:CDS | 45.0% | |
GATGGGAATATCTCTATCCC+TGG | + | chr2_1:67912283-67912302 | Msa0219930:CDS | 45.0% | |
GCCAGGTACGATTATTGCAA+TGG | + | chr2_1:67912399-67912418 | Msa0219930:CDS | 45.0% | |
CCCATTGCAATAATCGTACC+TGG | - | chr2_1:67912403-67912422 | None:intergenic | 45.0% | |
TTGCAATGGGACGGCTTAAT+CGG | + | chr2_1:67912413-67912432 | Msa0219930:CDS | 45.0% | |
GCTTAATCGGCCGAGTATTA+TGG | + | chr2_1:67912426-67912445 | Msa0219930:CDS | 45.0% | |
CGGCCGAGTATTATGGTTTA+TGG | + | chr2_1:67912433-67912452 | Msa0219930:CDS | 45.0% | |
GCTTCAAGTAGGATCAGTTG+TGG | + | chr2_1:67912752-67912771 | Msa0219930:intron | 45.0% | |
TCAAGTAGGATCAGTTGTGG+AGG | + | chr2_1:67912755-67912774 | Msa0219930:intron | 45.0% | |
AAGGGTTTCTCGTACCTGAA+AGG | - | chr2_1:67913595-67913614 | None:intergenic | 45.0% | |
CACAGTAACAGATGCGACAA+GGG | - | chr2_1:67913613-67913632 | None:intergenic | 45.0% | |
ACTATGAAACGGGGTCACAA+AGG | + | chr2_1:67913903-67913922 | Msa0219930:intron | 45.0% | |
CTATGAAACGGGGTCACAAA+GGG | + | chr2_1:67913904-67913923 | Msa0219930:intron | 45.0% | |
GAAGACGGTGCAAGAACAAA+AGG | - | chr2_1:67914007-67914026 | None:intergenic | 45.0% | |
AGCTTCTATTGCAGAAGCCA+TGG | - | chr2_1:67914348-67914367 | None:intergenic | 45.0% | |
GGCTTCTGCAATAGAAGCTA+TGG | + | chr2_1:67914349-67914368 | Msa0219930:CDS | 45.0% | |
TGGGAATGTCTCTTCCATAC+AGG | + | chr2_1:67914369-67914388 | Msa0219930:CDS | 45.0% | |
! | ACTTTAGTGGATCCTCAGCA+GGG | - | chr2_1:67914473-67914492 | None:intergenic | 45.0% |
! | AACTTTAGTGGATCCTCAGC+AGG | - | chr2_1:67914474-67914493 | None:intergenic | 45.0% |
TGCTGAGGATCCACTAAAGT+TGG | + | chr2_1:67914473-67914492 | Msa0219930:CDS | 45.0% | |
CGACACTCATCCAACTTTAG+TGG | - | chr2_1:67914486-67914505 | None:intergenic | 45.0% | |
TTGCGAGTGATGATATCTCG+GGG | - | chr2_1:67914555-67914574 | None:intergenic | 45.0% | |
CTAAAAAGCCCTGCTCAAGA+AGG | - | chr2_1:67915036-67915055 | None:intergenic | 45.0% | |
! | CTTGAGCAGGGCTTTTTAGA+TGG | + | chr2_1:67915037-67915056 | Msa0219930:CDS | 45.0% |
! | TTTTCCCTCCTTTGTCCGAA+GGG | + | chr2_1:67915194-67915213 | Msa0219930:CDS | 45.0% |
AAAGAGGGCTTGTACTTCTC+TGG | + | chr2_1:67915442-67915461 | Msa0219930:CDS | 45.0% | |
!!! | CGCACTTGTTTTTGAAGGAG+AGG | + | chr2_1:67915572-67915591 | Msa0219930:CDS | 45.0% |
ACCATTGGATCCAAGTAGGA+TGG | + | chr2_1:67915936-67915955 | Msa0219930:intron | 45.0% | |
TCCATCCTACTTGGATCCAA+TGG | - | chr2_1:67915940-67915959 | None:intergenic | 45.0% | |
CCCATTTCATCCATCCTACT+TGG | - | chr2_1:67915949-67915968 | None:intergenic | 45.0% | |
AGTAGGATGGATGAAATGGG+GGG | + | chr2_1:67915949-67915968 | Msa0219930:intron | 45.0% | |
AGTGGGCACCAAAAGTAGAT+GGG | + | chr2_1:67916140-67916159 | Msa0219930:intron | 45.0% | |
GCACCAAAAGTAGATGGGAT+TGG | + | chr2_1:67916145-67916164 | Msa0219930:intron | 45.0% | |
ACGATAGGTACTTCACAAGG+AGG | + | chr2_1:67916257-67916276 | Msa0219930:intron | 45.0% | |
CGATAGGTACTTCACAAGGA+GGG | + | chr2_1:67916258-67916277 | Msa0219930:intron | 45.0% | |
! | CAGTCCAGAGCTAGAAGTAT+TGG | + | chr2_1:67916296-67916315 | Msa0219930:intron | 45.0% |
!! | TGTCCCAATACTTCTAGCTC+TGG | - | chr2_1:67916303-67916322 | None:intergenic | 45.0% |
ACCATAGGAACATCACAAGG+AGG | + | chr2_1:67916336-67916355 | Msa0219930:intron | 45.0% | |
TCCTCCTTGTGATGTTCCTA+TGG | - | chr2_1:67916340-67916359 | None:intergenic | 45.0% | |
CGACTCATTCACATGTATCG+TGG | - | chr2_1:67916463-67916482 | None:intergenic | 45.0% | |
ATGAGATTCAGGGGAAGTTG+TGG | - | chr2_1:67916584-67916603 | None:intergenic | 45.0% | |
GATTCACTCACATTCTGCTG+CGG | + | chr2_1:67916604-67916623 | Msa0219930:intron | 45.0% | |
ATTCACTCACATTCTGCTGC+GGG | + | chr2_1:67916605-67916624 | Msa0219930:intron | 45.0% | |
GAAACCAGGTCAACTTACCA+TGG | - | chr2_1:67916647-67916666 | None:intergenic | 45.0% | |
GAGCAAAACACTATGTAGGC+AGG | - | chr2_1:67916838-67916857 | None:intergenic | 45.0% | |
GAGGGAGCAAAACACTATGT+AGG | - | chr2_1:67916842-67916861 | None:intergenic | 45.0% | |
AAGAAGAACAGAAGAGGAGC+AGG | - | chr2_1:67916871-67916890 | None:intergenic | 45.0% | |
ATATGGTTCATTGCCTGGGA+TGG | + | chr2_1:67917002-67917021 | Msa0219930:intron | 45.0% | |
! | ACAAGTACTTTTGCCATCCC+AGG | - | chr2_1:67917018-67917037 | None:intergenic | 45.0% |
GTTAACATCTCAGGCATTCC+CGG | - | chr2_1:67917438-67917457 | None:intergenic | 45.0% | |
GCTCCCATTATTGCACTTGT+TGG | - | chr2_1:67917462-67917481 | None:intergenic | 45.0% | |
! | ACAAGTGCAATAATGGGAGC+AGG | + | chr2_1:67917462-67917481 | Msa0219930:CDS | 45.0% |
! | CAAGTGCAATAATGGGAGCA+GGG | + | chr2_1:67917463-67917482 | Msa0219930:CDS | 45.0% |
! | TTGACCGACGGAAGATTTTC+AGG | + | chr2_1:67917802-67917821 | Msa0219930:CDS | 45.0% |
!! | AGATTTTCAGGAGGCTCACA+TGG | + | chr2_1:67917814-67917833 | Msa0219930:CDS | 45.0% |
!! | GATTTTCAGGAGGCTCACAT+GGG | + | chr2_1:67917815-67917834 | Msa0219930:CDS | 45.0% |
TGGTCAATTCACCTGTGCTT+CGG | - | chr2_1:67917863-67917882 | None:intergenic | 45.0% | |
AGTTTCAGATGAGGAGATGG+AGG | + | chr2_1:67918859-67918878 | Msa0219930:CDS | 45.0% | |
AATCTTCTGTTGCTGTCACG+TGG | - | chr2_1:67919114-67919133 | None:intergenic | 45.0% | |
AATGTGAAGCCTGCTTCAAG+CGG | + | chr2_1:67919256-67919275 | Msa0219930:CDS | 45.0% | |
TGTGTAACAGACGAGTAGAG+AGG | + | chr2_1:67919280-67919299 | Msa0219930:exon | 45.0% | |
ACAAGAACAAAGAGAGGAGG+TGG | - | chr2_1:67919465-67919484 | None:intergenic | 45.0% | |
!! | TTTAAAAAAAAATTTACATA+AGG | + | chr2_1:67918009-67918028 | Msa0219930:intron | 5.0% |
!!! | AGTGGTGAGGGTTTTGGAGT+GGG | - | chr2_1:67911770-67911789 | None:intergenic | 50.0% |
!! | TGCATTGTTGGTGGTGGAGA+CGG | - | chr2_1:67911806-67911825 | None:intergenic | 50.0% |
! | GTTGACTGCATTGTTGGTGG+TGG | - | chr2_1:67911812-67911831 | None:intergenic | 50.0% |
TTTACGGATATGCGCCGAGA+GGG | - | chr2_1:67911884-67911903 | None:intergenic | 50.0% | |
! | TTTTACGGATATGCGCCGAG+AGG | - | chr2_1:67911885-67911904 | None:intergenic | 50.0% |
! | AGGGAGATTGGTTGAGATGG+AGG | - | chr2_1:67911909-67911928 | None:intergenic | 50.0% |
! | GGAAGGGAGATTGGTTGAGA+TGG | - | chr2_1:67911912-67911931 | None:intergenic | 50.0% |
!!! | TGCGCCTTGGGATTTTGGTT+CGG | - | chr2_1:67911975-67911994 | None:intergenic | 50.0% |
! | TGTGATGCGCCTTGGGATTT+TGG | - | chr2_1:67911980-67911999 | None:intergenic | 50.0% |
GATTGCTTGTGATGCGCCTT+GGG | - | chr2_1:67911987-67912006 | None:intergenic | 50.0% | |
GGTGTTTCCTTCGTACCAGA+CGG | - | chr2_1:67912068-67912087 | None:intergenic | 50.0% | |
TAACAGCTTCGGAGAGATGG+AGG | - | chr2_1:67912105-67912124 | None:intergenic | 50.0% | |
!! | GCTATTTCTATGGGGACCAG+AGG | + | chr2_1:67912187-67912206 | Msa0219930:CDS | 50.0% |
ATGGCTGCTCAGTGGTATGA+TGG | + | chr2_1:67912265-67912284 | Msa0219930:CDS | 50.0% | |
TGGCTGCTCAGTGGTATGAT+GGG | + | chr2_1:67912266-67912285 | Msa0219930:CDS | 50.0% | |
! | TGATTTGTGTGTAGGCAGGG+TGG | + | chr2_1:67913081-67913100 | Msa0219930:intron | 50.0% |
! | TTTCCAGCCTGGTCACTTTC+AGG | + | chr2_1:67913545-67913564 | Msa0219930:intron | 50.0% |
! | TTCCAGCCTGGTCACTTTCA+GGG | + | chr2_1:67913546-67913565 | Msa0219930:intron | 50.0% |
GTATCACCCTGAAAGTGACC+AGG | - | chr2_1:67913555-67913574 | None:intergenic | 50.0% | |
CGACATAGTGTCAGCCTTTC+AGG | + | chr2_1:67913578-67913597 | Msa0219930:CDS | 50.0% | |
CCACAGTAACAGATGCGACA+AGG | - | chr2_1:67913614-67913633 | None:intergenic | 50.0% | |
CCTTGTCGCATCTGTTACTG+TGG | + | chr2_1:67913611-67913630 | Msa0219930:intron | 50.0% | |
ACGGGGTCACAAAGGGAAAA+AGG | + | chr2_1:67913911-67913930 | Msa0219930:intron | 50.0% | |
GGGTCACAAAGGGAAAAAGG+TGG | + | chr2_1:67913914-67913933 | Msa0219930:intron | 50.0% | |
! | CTTTAGTGGATCCTCAGCAG+GGG | - | chr2_1:67914472-67914491 | None:intergenic | 50.0% |
!! | TTGGATGAGTGTCGGTTAGC+TGG | + | chr2_1:67914492-67914511 | Msa0219930:CDS | 50.0% |
!! | AGAAGGTAGCGGATAACTGC+AGG | - | chr2_1:67915019-67915038 | None:intergenic | 50.0% |
TATCCGCTACCTTCTTGAGC+AGG | + | chr2_1:67915024-67915043 | Msa0219930:CDS | 50.0% | |
ATCCGCTACCTTCTTGAGCA+GGG | + | chr2_1:67915025-67915044 | Msa0219930:CDS | 50.0% | |
GGTCTTTCCAGTGACTAGAG+AGG | - | chr2_1:67915155-67915174 | None:intergenic | 50.0% | |
! | CTTTTCCCTCCTTTGTCCGA+AGG | + | chr2_1:67915193-67915212 | Msa0219930:CDS | 50.0% |
ACAAGCTCATACCTGCCCTT+CGG | - | chr2_1:67915212-67915231 | None:intergenic | 50.0% | |
ATATGGGAACCTTGCACCAC+AGG | + | chr2_1:67915396-67915415 | Msa0219930:CDS | 50.0% | |
TATGGGAACCTTGCACCACA+GGG | + | chr2_1:67915397-67915416 | Msa0219930:CDS | 50.0% | |
!!! | GGTCCCGCACTTGTTTTTGA+AGG | + | chr2_1:67915567-67915586 | Msa0219930:intron | 50.0% |
GATGAAATGGGGGGTTGCTT+CGG | + | chr2_1:67915958-67915977 | Msa0219930:intron | 50.0% | |
GAGTGGGCACCAAAAGTAGA+TGG | + | chr2_1:67916139-67916158 | Msa0219930:intron | 50.0% | |
TGCTGCGGGTTCTGCATTTA+TGG | + | chr2_1:67916777-67916796 | Msa0219930:intron | 50.0% | |
AGACGCACAGTAGGAAGGAA+TGG | - | chr2_1:67916806-67916825 | None:intergenic | 50.0% | |
AAGAACAGAAGAGGAGCAGG+AGG | - | chr2_1:67916868-67916887 | None:intergenic | 50.0% | |
!! | ACCGACGGAAGATTTTCAGG+AGG | + | chr2_1:67917805-67917824 | Msa0219930:CDS | 50.0% |
GCCTCCTGAAAATCTTCCGT+CGG | - | chr2_1:67917809-67917828 | None:intergenic | 50.0% | |
TCATATTTGCCCCGAAGCAC+AGG | + | chr2_1:67917849-67917868 | Msa0219930:CDS | 50.0% | |
GTCAATTCACCTGTGCTTCG+GGG | - | chr2_1:67917861-67917880 | None:intergenic | 50.0% | |
GGTCAATTCACCTGTGCTTC+GGG | - | chr2_1:67917862-67917881 | None:intergenic | 50.0% | |
GTATAGGAAGGCGGTCCAAT+TGG | + | chr2_1:67918776-67918795 | Msa0219930:intron | 50.0% | |
! | TGGAGGCACGTAGGAAGAAA+TGG | + | chr2_1:67918876-67918895 | Msa0219930:CDS | 50.0% |
CTACGCATACAAGCACCTTG+TGG | + | chr2_1:67919145-67919164 | Msa0219930:intron | 50.0% | |
GTTACACATCCGCTTGAAGC+AGG | - | chr2_1:67919268-67919287 | None:intergenic | 50.0% | |
! | TGGGCGCGGAAAATGGGTTT+AGG | - | chr2_1:67911751-67911770 | None:intergenic | 55.0% |
TTGGAGTGGGCGCGGAAAAT+GGG | - | chr2_1:67911757-67911776 | None:intergenic | 55.0% | |
! | TTTGGAGTGGGCGCGGAAAA+TGG | - | chr2_1:67911758-67911777 | None:intergenic | 55.0% |
!!! | GAGTGGTGAGGGTTTTGGAG+TGG | - | chr2_1:67911771-67911790 | None:intergenic | 55.0% |
! | GTGTGGAGTGGTGAGGGTTT+TGG | - | chr2_1:67911776-67911795 | None:intergenic | 55.0% |
!! | ATTGTTGGTGGTGGAGACGG+CGG | - | chr2_1:67911803-67911822 | None:intergenic | 55.0% |
GGGTTCAGTGGAAGGGAGAT+TGG | - | chr2_1:67911921-67911940 | None:intergenic | 55.0% | |
GGATTGCTTGTGATGCGCCT+TGG | - | chr2_1:67911988-67912007 | None:intergenic | 55.0% | |
CAAGCAATCCTCTACGGCGT+TGG | + | chr2_1:67911998-67912017 | Msa0219930:CDS | 55.0% | |
!! | ACGGAGGAAACACCGACTTG+TGG | - | chr2_1:67912049-67912068 | None:intergenic | 55.0% |
! | AAGTCGGTGTTTCCTCCGTC+TGG | + | chr2_1:67912050-67912069 | Msa0219930:CDS | 55.0% |
GTTTCCTCCGTCTGGTACGA+AGG | + | chr2_1:67912058-67912077 | Msa0219930:CDS | 55.0% | |
GTTTCCTTCGTACCAGACGG+AGG | - | chr2_1:67912065-67912084 | None:intergenic | 55.0% | |
GTTATCCGCAACTCTTGCCC+TGG | + | chr2_1:67914287-67914306 | Msa0219930:CDS | 55.0% | |
TAGCTCATCTACCCCTGCTG+AGG | + | chr2_1:67914458-67914477 | Msa0219930:intron | 55.0% | |
AGCCCTGCTCAAGAAGGTAG+CGG | - | chr2_1:67915030-67915049 | None:intergenic | 55.0% | |
CATACCTGCCCTTCGGACAA+AGG | - | chr2_1:67915205-67915224 | None:intergenic | 55.0% | |
CAACAGAACCCTGTGGTGCA+AGG | - | chr2_1:67915408-67915427 | None:intergenic | 55.0% | |
! | ACGGCCATGGTAAGTTGACC+TGG | + | chr2_1:67916640-67916659 | Msa0219930:intron | 55.0% |
AAGAGGAGCAGGAGGAGAGA+GGG | - | chr2_1:67916860-67916879 | None:intergenic | 55.0% | |
ATTAGGGGAGAGGGGCCTAA+AGG | + | chr2_1:67917408-67917427 | Msa0219930:CDS | 55.0% | |
! | GCAATAATGGGAGCAGGGCT+TGG | + | chr2_1:67917468-67917487 | Msa0219930:CDS | 55.0% |
AATGGGAGCAGGGCTTGGAA+AGG | + | chr2_1:67917473-67917492 | Msa0219930:CDS | 55.0% | |
AGGAGGCTCACATGGGTTTG+TGG | + | chr2_1:67917822-67917841 | Msa0219930:CDS | 55.0% | |
GGCTCACATGGGTTTGTGGT+TGG | + | chr2_1:67917826-67917845 | Msa0219930:CDS | 55.0% | |
GTGGGTGTGAGTGTGTAACC+AGG | + | chr2_1:67918434-67918453 | Msa0219930:intron | 55.0% | |
GGAAGGCGGTCCAATTGGTT+TGG | + | chr2_1:67918781-67918800 | Msa0219930:intron | 55.0% | |
! | ATGAGGAGATGGAGGCACGT+AGG | + | chr2_1:67918867-67918886 | Msa0219930:CDS | 55.0% |
!!! | TGAGGGTTTTGGAGTGGGCG+CGG | - | chr2_1:67911765-67911784 | None:intergenic | 60.0% |
! | GGAGGAGTGTGGAGTGGTGA+GGG | - | chr2_1:67911782-67911801 | None:intergenic | 60.0% |
! | AGTAGGGAAGAGGGGGGTGT+AGG | - | chr2_1:67911849-67911868 | None:intergenic | 60.0% |
GGTGTGAGTAGGGAAGAGGG+GGG | - | chr2_1:67911855-67911874 | None:intergenic | 60.0% | |
GGGTGTGAGTAGGGAAGAGG+GGG | - | chr2_1:67911856-67911875 | None:intergenic | 60.0% | |
GGGGTGTGAGTAGGGAAGAG+GGG | - | chr2_1:67911857-67911876 | None:intergenic | 60.0% | |
! | GGGGGTGTGAGTAGGGAAGA+GGG | - | chr2_1:67911858-67911877 | None:intergenic | 60.0% |
! | TGGGGGTGTGAGTAGGGAAG+AGG | - | chr2_1:67911859-67911878 | None:intergenic | 60.0% |
! | AGGGAGTGGGGGTGTGAGTA+GGG | - | chr2_1:67911865-67911884 | None:intergenic | 60.0% |
ATATGCGCCGAGAGGGAGTG+GGG | - | chr2_1:67911877-67911896 | None:intergenic | 60.0% | |
GATATGCGCCGAGAGGGAGT+GGG | - | chr2_1:67911878-67911897 | None:intergenic | 60.0% | |
!! | AAAGAAGGCGTCGCCGAAGC+CGG | + | chr2_1:67912124-67912143 | Msa0219930:CDS | 60.0% |
CACCCTGAAAGTGACCAGGC+TGG | - | chr2_1:67913551-67913570 | None:intergenic | 60.0% | |
CAGCACCAGGGCAAGAGTTG+CGG | - | chr2_1:67914295-67914314 | None:intergenic | 60.0% | |
GCAACTCTTGCCCTGGTGCT+GGG | + | chr2_1:67914294-67914313 | Msa0219930:CDS | 60.0% | |
! | CAACTCTTGCCCTGGTGCTG+GGG | + | chr2_1:67914295-67914314 | Msa0219930:CDS | 60.0% |
CCTGCCCTTCGGACAAAGGA+GGG | - | chr2_1:67915201-67915220 | None:intergenic | 60.0% | |
ACCTGCCCTTCGGACAAAGG+AGG | - | chr2_1:67915202-67915221 | None:intergenic | 60.0% | |
! | CTGCGGGTGCTGTCTTGAGA+CGG | + | chr2_1:67916621-67916640 | Msa0219930:intron | 60.0% |
GTGCTGTCTTGAGACGGCCA+TGG | + | chr2_1:67916627-67916646 | Msa0219930:intron | 60.0% | |
GAAGAGGAGCAGGAGGAGAG+AGG | - | chr2_1:67916861-67916880 | None:intergenic | 60.0% | |
AGAGGGGCCTAAAGGTGGTC+CGG | + | chr2_1:67917416-67917435 | Msa0219930:CDS | 60.0% | |
GGCATTCCCGGACCACCTTT+AGG | - | chr2_1:67917426-67917445 | None:intergenic | 60.0% | |
! | CGGAGGAGTGTGGAGTGGTG+AGG | - | chr2_1:67911783-67911802 | None:intergenic | 65.0% |
! | GGGAAGAGGGGGGTGTAGGT+TGG | - | chr2_1:67911845-67911864 | None:intergenic | 65.0% |
! | GAGGGAGTGGGGGTGTGAGT+AGG | - | chr2_1:67911866-67911885 | None:intergenic | 65.0% |
CTCACACCCCCACTCCCTCT+CGG | + | chr2_1:67911867-67911886 | Msa0219930:CDS | 65.0% | |
TATGCGCCGAGAGGGAGTGG+GGG | - | chr2_1:67911876-67911895 | None:intergenic | 65.0% | |
GGATATGCGCCGAGAGGGAG+TGG | - | chr2_1:67911879-67911898 | None:intergenic | 65.0% | |
CGGAGAGACCAACGCCGTAG+AGG | - | chr2_1:67912009-67912028 | None:intergenic | 65.0% | |
CGCAACTCTTGCCCTGGTGC+TGG | + | chr2_1:67914293-67914312 | Msa0219930:CDS | 65.0% | |
CACCACAAGCCCCAGCACCA+GGG | - | chr2_1:67914307-67914326 | None:intergenic | 65.0% | |
CCCTCCTTTGTCCGAAGGGC+AGG | + | chr2_1:67915198-67915217 | Msa0219930:CDS | 65.0% | |
AGGGGAGAGGGGCCTAAAGG+TGG | + | chr2_1:67917411-67917430 | Msa0219930:CDS | 65.0% | |
GAGGGGCCTAAAGGTGGTCC+GGG | + | chr2_1:67917417-67917436 | Msa0219930:CDS | 65.0% | |
! | GACGGCGGAGGAGTGTGGAG+TGG | - | chr2_1:67911788-67911807 | None:intergenic | 70.0% |
GTGGAGACGGCGGAGGAGTG+TGG | - | chr2_1:67911793-67911812 | None:intergenic | 70.0% | |
!! | GTTGGTGGTGGAGACGGCGG+AGG | - | chr2_1:67911800-67911819 | None:intergenic | 70.0% |
! | TGCCCTGGTGCTGGGGCTTG+TGG | + | chr2_1:67914302-67914321 | Msa0219930:CDS | 70.0% |
CCACCACAAGCCCCAGCACC+AGG | - | chr2_1:67914308-67914327 | None:intergenic | 70.0% | |
! | CCTGGTGCTGGGGCTTGTGG+TGG | + | chr2_1:67914305-67914324 | Msa0219930:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 67911669 | 67919628 | 67911669 | ID=Msa0219930;Name=Msa0219930 |
chr2_1 | mRNA | 67911669 | 67919628 | 67911669 | ID=Msa0219930-mRNA-1;Parent=Msa0219930;Name=Msa0219930-mRNA-1;_AED=0.15;_eAED=0.15;_QI=152|1|1|1|0.92|0.92|14|331|598 |
chr2_1 | exon | 67911669 | 67912318 | 67911669 | ID=Msa0219930-mRNA-1:exon:19230;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67912397 | 67912468 | 67912397 | ID=Msa0219930-mRNA-1:exon:19231;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67913552 | 67913599 | 67913552 | ID=Msa0219930-mRNA-1:exon:19232;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67914236 | 67914390 | 67914236 | ID=Msa0219930-mRNA-1:exon:19233;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67914461 | 67914655 | 67914461 | ID=Msa0219930-mRNA-1:exon:19234;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67914733 | 67914844 | 67914733 | ID=Msa0219930-mRNA-1:exon:19235;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67915004 | 67915073 | 67915004 | ID=Msa0219930-mRNA-1:exon:19236;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67915161 | 67915219 | 67915161 | ID=Msa0219930-mRNA-1:exon:19237;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67915340 | 67915463 | 67915340 | ID=Msa0219930-mRNA-1:exon:19238;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67915568 | 67915638 | 67915568 | ID=Msa0219930-mRNA-1:exon:19239;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67917393 | 67917494 | 67917393 | ID=Msa0219930-mRNA-1:exon:19240;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67917790 | 67917870 | 67917790 | ID=Msa0219930-mRNA-1:exon:19241;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67918782 | 67918940 | 67918782 | ID=Msa0219930-mRNA-1:exon:19242;Parent=Msa0219930-mRNA-1 |
chr2_1 | exon | 67919247 | 67919628 | 67919247 | ID=Msa0219930-mRNA-1:exon:19243;Parent=Msa0219930-mRNA-1 |
chr2_1 | five_prime_UTR | 67911669 | 67911820 | 67911669 | ID=Msa0219930-mRNA-1:five_prime_utr;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67911821 | 67912318 | 67911821 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67912397 | 67912468 | 67912397 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67913552 | 67913599 | 67913552 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67914236 | 67914390 | 67914236 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67914461 | 67914655 | 67914461 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67914733 | 67914844 | 67914733 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67915004 | 67915073 | 67915004 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67915161 | 67915219 | 67915161 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67915340 | 67915463 | 67915340 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67915568 | 67915638 | 67915568 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67917393 | 67917494 | 67917393 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67917790 | 67917870 | 67917790 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67918782 | 67918940 | 67918782 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | CDS | 67919247 | 67919297 | 67919247 | ID=Msa0219930-mRNA-1:cds;Parent=Msa0219930-mRNA-1 |
chr2_1 | three_prime_UTR | 67919298 | 67919628 | 67919298 | ID=Msa0219930-mRNA-1:three_prime_utr;Parent=Msa0219930-mRNA-1 |
Gene Sequence |
Protein sequence |