AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0337020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0337020 MtrunA17_Chr4g0064061 93.694 111 7 0 5 115 1218 1328 8.38e-68 220
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0337020 AT3G33530.4 63.158 114 39 1 5 115 1200 1313 5.94e-44 152
Msa0337020 AT3G33530.1 63.158 114 39 1 5 115 1226 1339 5.95e-44 152
Msa0337020 AT3G33530.3 63.158 114 39 1 5 115 1257 1370 6.82e-44 152
Msa0337020 AT3G33530.2 63.158 114 39 1 5 115 1239 1352 7.36e-44 152
Msa0337020 AT2G26610.1 47.748 111 36 1 5 115 1155 1243 5.22e-28 107

Find 161 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATAATCTTGTTGAAAA+AGG 0.180628 2_4:-56658144 None:intergenic
CATTTGACTGCACCTGTTCT+TGG 0.197212 2_4:+56663948 Msa0337020:three_prime_UTR
TGGATTTCTGACTATGTTAT+TGG 0.210635 2_4:+56658754 Msa0337020:five_prime_UTR
GTTCTTCATTGTTGCCTAAT+TGG 0.215523 2_4:+56660665 Msa0337020:five_prime_UTR
TTGATAATTGAAATGTAAAT+TGG 0.216239 2_4:+56660546 Msa0337020:five_prime_UTR
GCAAAATAACATCTTGTCTT+TGG 0.235427 2_4:+56664608 Msa0337020:three_prime_UTR
GGGTCGAGGGAGAGAGAGGG+AGG 0.253470 2_4:+56657967 Msa0337020:five_prime_UTR
TGTTGATTGTCTTAAAATTA+TGG 0.256283 2_4:+56663544 Msa0337020:three_prime_UTR
AATTGCAAGATCACCTTAAC+AGG 0.263546 2_4:-56661690 None:intergenic
ATTGAAACACTTGACCTTCA+TGG 0.265501 2_4:-56660438 None:intergenic
ATGGGACTTGAGGTGGAATT+TGG 0.271420 2_4:+56662353 Msa0337020:five_prime_UTR
GTTTCTGACCTGGGTATTAC+TGG 0.281476 2_4:+56663354 Msa0337020:CDS
CTTGAACGGTGGTGATGGTC+TGG 0.289548 2_4:-56662400 None:intergenic
ATATTCTACTATTGATGATT+TGG 0.300863 2_4:+56658991 Msa0337020:five_prime_UTR
GTGCATCTATGCATGGATTA+AGG 0.302472 2_4:+56663492 Msa0337020:CDS
CGAGGGAGAGAGAGGGAGGG+AGG 0.305014 2_4:+56657971 Msa0337020:five_prime_UTR
CTCCAAAGCACTCAACTAAA+AGG 0.311692 2_4:-56658182 None:intergenic
TGGGCAATACCAAAGAAAAT+TGG 0.311834 2_4:+56663470 Msa0337020:CDS
TTTGAAGTTTGTAGGATTGA+TGG 0.325667 2_4:+56660062 Msa0337020:intron
CAATCTCTGCATGGATTTCA+TGG 0.325887 2_4:-56663332 None:intergenic
TCTCTTCCTTTGCACTCATC+TGG 0.326355 2_4:-56659383 None:intergenic
TGAGGAGGAGCAGAGGCTTT+TGG 0.329273 2_4:+56660697 Msa0337020:five_prime_UTR
TTGATAGTTTCATGTCAAAT+TGG 0.329635 2_4:-56665126 None:intergenic
CTCTTTGCTAGTTTAAGCCT+TGG 0.348527 2_4:-56662456 None:intergenic
GGATTTCTGACTATGTTATT+GGG 0.350131 2_4:+56658755 Msa0337020:five_prime_UTR
TAGAGGTGGTTTGGGTGGCT+TGG 0.367131 2_4:+56658734 Msa0337020:five_prime_UTR
ATCAAAGATGGACAAGTTAT+AGG 0.369619 2_4:+56661639 Msa0337020:five_prime_UTR
TGTCAGATGAGTGGTGATTC+TGG 0.373206 2_4:+56660297 Msa0337020:intron
AGCTAAATACATTGTAAAGC+TGG 0.378320 2_4:+56658921 Msa0337020:five_prime_UTR
GATTGATGGTTCAGTGAGAT+TGG 0.381066 2_4:+56660076 Msa0337020:five_prime_UTR
AGAGAGGGAGGGAGGAGTGC+CGG 0.384400 2_4:+56657979 Msa0337020:five_prime_UTR
GAATTCGCCGGCGGTGGGAT+TGG 0.402273 2_4:+56658040 Msa0337020:five_prime_UTR
TCCTATGATAGAGGTGGTTT+GGG 0.403036 2_4:+56658726 Msa0337020:five_prime_UTR
TATAGGTTATGTGGATCAAT+GGG 0.403077 2_4:+56661656 Msa0337020:five_prime_UTR
TGGTGAAGATTGTAAAAGAA+AGG 0.410674 2_4:-56658114 None:intergenic
CTTGCAGAGTGTTGCAAAGA+TGG 0.412199 2_4:+56663091 Msa0337020:intron
TGCACAGCGAACATGGTATC+TGG 0.413263 2_4:+56663127 Msa0337020:CDS
ATCCTATGATAGAGGTGGTT+TGG 0.419822 2_4:+56658725 Msa0337020:five_prime_UTR
CCTCACAACAGTATCCAATT+AGG 0.423095 2_4:-56660679 None:intergenic
ACTAGAATGAAAATTGCATT+AGG 0.423344 2_4:+56660896 Msa0337020:five_prime_UTR
TTATGATCATTTCCAAGAAC+AGG 0.423613 2_4:-56663960 None:intergenic
GGAGGGAGTCTGATTTGTTG+TGG 0.434640 2_4:-56658068 None:intergenic
CATTGAACTAAACACACTTC+CGG 0.436140 2_4:+56664724 Msa0337020:three_prime_UTR
CAAGTTCATCGGTTAATGAT+AGG 0.437799 2_4:+56663385 Msa0337020:CDS
AGTTGTTCAGCTTCTTGAAC+GGG 0.438920 2_4:+56664692 Msa0337020:three_prime_UTR
AGGAGGCCTTACATGTCAAA+AGG 0.450488 2_4:+56662477 Msa0337020:exon
GGGCACTTCACTCCCTGTTA+AGG 0.450907 2_4:+56661677 Msa0337020:five_prime_UTR
GGTGAAGATTGTAAAAGAAA+GGG 0.452170 2_4:-56658113 None:intergenic
TTGTGGAAAAGAACAATAAC+CGG 0.454826 2_4:+56660354 Msa0337020:five_prime_UTR
GATAAACATTGCAGCTGTAT+CGG 0.455296 2_4:-56663301 None:intergenic
AAACACTGTATCTTTGCTTC+CGG 0.457800 2_4:-56660373 None:intergenic
GGAGAAGAAGTCGCCGGCGG+TGG 0.459230 2_4:+56658000 Msa0337020:five_prime_UTR
TTGCTGTTGATGAATACTTT+GGG 0.462642 2_4:+56663451 Msa0337020:CDS
GTTGCTGTTGATGAATACTT+TGG 0.464781 2_4:+56663450 Msa0337020:CDS
GGCTCTGCTTAACAATCAAC+AGG 0.465116 2_4:+56660975 Msa0337020:five_prime_UTR
GGAGAAGAATTCGCCGGCGG+TGG 0.467459 2_4:+56658034 Msa0337020:five_prime_UTR
ATAAACATTGCAGCTGTATC+GGG 0.470448 2_4:-56663300 None:intergenic
GATCCATCATATATTGCTAC+TGG 0.472187 2_4:-56660508 None:intergenic
AAGAATATGTTGTCTTCCTC+AGG 0.473205 2_4:-56660333 None:intergenic
GAGGGAGTCTGATTTGTTGT+GGG 0.474350 2_4:-56658067 None:intergenic
TTGAACGGTGGTGATGGTCT+GGG 0.480172 2_4:-56662399 None:intergenic
GCAACTGCAGCTCTCACAGC+AGG 0.480350 2_4:+56660954 Msa0337020:five_prime_UTR
CCGGCGGTGGGAGGGAGTAC+CGG 0.483738 2_4:+56658013 Msa0337020:five_prime_UTR
TTATAGGTTATGTGGATCAA+TGG 0.483999 2_4:+56661655 Msa0337020:five_prime_UTR
TGCTTCCCACATCCAGATGT+TGG 0.484455 2_4:-56664759 None:intergenic
TGAGCTCTTAGAAGCTGTGC+AGG 0.488333 2_4:+56663908 Msa0337020:three_prime_UTR
AGCTTCTTGAACGGTGGTGA+TGG 0.489012 2_4:-56662405 None:intergenic
AATTGCATTAGGTGCAGCTA+AGG 0.490148 2_4:+56660907 Msa0337020:five_prime_UTR
GAACTTTGATATAAAAGTGC+AGG 0.491200 2_4:+56660098 Msa0337020:five_prime_UTR
TGTAAAGTGCATACAAGGAT+TGG 0.495823 2_4:+56658875 Msa0337020:five_prime_UTR
GTACATGACAAGAGGGAGCT+TGG 0.497616 2_4:+56660727 Msa0337020:five_prime_UTR
TGCAGAGATTGTTTCTGACC+TGG 0.497808 2_4:+56663344 Msa0337020:CDS
ACCCAAACCACCTCTATCAT+AGG 0.498618 2_4:-56658727 None:intergenic
GCTAAATACATTGTAAAGCT+GGG 0.498858 2_4:+56658922 Msa0337020:five_prime_UTR
TTCCTTTGCACTCATCTGGA+TGG 0.513836 2_4:-56659379 None:intergenic
GAGTGCAAAGGAAGAGATTG+TGG 0.517469 2_4:+56659389 Msa0337020:five_prime_UTR
TATGATAGAGGTGGTTTGGG+TGG 0.518870 2_4:+56658729 Msa0337020:five_prime_UTR
GAACAGGTGCAGTCAAATGA+TGG 0.520727 2_4:-56663944 None:intergenic
ACCGCCGGCGACTTCTTCTC+CGG 0.520831 2_4:-56657998 None:intergenic
CAGGGTGATATGATCAAAGA+TGG 0.524043 2_4:+56661627 Msa0337020:intron
AAGAAGTCGCCGGCGGTGGG+AGG 0.528234 2_4:+56658004 Msa0337020:five_prime_UTR
GGTCGAGGGAGAGAGAGGGA+GGG 0.528471 2_4:+56657968 Msa0337020:five_prime_UTR
TTTCCAGTAGCAATATATGA+TGG 0.529167 2_4:+56660505 Msa0337020:five_prime_UTR
GACGACAATGAGAGAGGGGA+GGG 0.529277 2_4:-56658085 None:intergenic
TGGACAAGTTATAGGTTATG+TGG 0.534522 2_4:+56661647 Msa0337020:five_prime_UTR
TAAAATGTAAAGTGCATACA+AGG 0.536296 2_4:+56658870 Msa0337020:five_prime_UTR
GCAGAGATTGTTTCTGACCT+GGG 0.538789 2_4:+56663345 Msa0337020:CDS
GTTCAAGAAGCTGAACAACT+TGG 0.541778 2_4:-56664689 None:intergenic
TTTAGTTGAGTGCTTTGGAG+TGG 0.545392 2_4:+56658185 Msa0337020:five_prime_UTR
GCTTCTGCTTGCTAGAGACA+AGG 0.547384 2_4:+56658958 Msa0337020:five_prime_UTR
GAAAGGGACGACAATGAGAG+AGG 0.548013 2_4:-56658091 None:intergenic
ATTTCCAAAATCTAGACCAT+GGG 0.554480 2_4:+56663580 Msa0337020:three_prime_UTR
CTTCTGCTTGCTAGAGACAA+GGG 0.558343 2_4:+56658959 Msa0337020:five_prime_UTR
GGAGGCCTTACATGTCAAAA+GGG 0.560700 2_4:+56662478 Msa0337020:exon
TATGTCATGCACAGCGAACA+TGG 0.561667 2_4:+56663120 Msa0337020:CDS
TGACAAGCTTCTTGAGACCA+AGG 0.563747 2_4:+56662439 Msa0337020:five_prime_UTR
AAGTTGTTCAGCTTCTTGAA+CGG 0.563877 2_4:+56664691 Msa0337020:three_prime_UTR
AGAAGTCGCCGGCGGTGGGA+GGG 0.564843 2_4:+56658005 Msa0337020:five_prime_UTR
AGGGAGTCTGATTTGTTGTG+GGG 0.564914 2_4:-56658066 None:intergenic
CCGGTACTCCCTCCCACCGC+CGG 0.565659 2_4:-56658013 None:intergenic
GTCTTTGGAACCACTTGATG+CGG 0.568436 2_4:+56664623 Msa0337020:three_prime_UTR
TCAAACCTTGCAGTCAGATG+TGG 0.568833 2_4:+56661763 Msa0337020:intron
GAGAAGAAGTCGCCGGCGGT+GGG 0.569272 2_4:+56658001 Msa0337020:five_prime_UTR
AGATAGTGATCCTATGATAG+AGG 0.569613 2_4:+56658717 Msa0337020:five_prime_UTR
ACCGCCGGCGAATTCTTCTC+CGG 0.570939 2_4:-56658032 None:intergenic
GAGAAGAATTCGCCGGCGGT+GGG 0.571292 2_4:+56658035 Msa0337020:five_prime_UTR
GATTGTGATGGGACTTGAGG+TGG 0.571617 2_4:+56662346 Msa0337020:five_prime_UTR
AAAATTGGTGCATCTATGCA+TGG 0.571863 2_4:+56663485 Msa0337020:CDS
AAAGGGACGACAATGAGAGA+GGG 0.573809 2_4:-56658090 None:intergenic
TGGCGATGAATCAAGTTCAT+CGG 0.575140 2_4:+56663374 Msa0337020:CDS
AGTGCAAAGGAAGAGATTGT+GGG 0.575422 2_4:+56659390 Msa0337020:five_prime_UTR
TTGCAGAGTGTTGCAAAGAT+GGG 0.577527 2_4:+56663092 Msa0337020:intron
CATGGATTTCATGGCATGCA+AGG 0.578409 2_4:-56663323 None:intergenic
TGAGATTGTGATGGGACTTG+AGG 0.583589 2_4:+56662343 Msa0337020:five_prime_UTR
CATGTCAGCAGCTTCTTGAA+CGG 0.584545 2_4:-56662414 None:intergenic
TGCTTCTTGTAGTGCACCAG+CGG 0.588769 2_4:-56663250 None:intergenic
GATTGTAAAAGAAAGGGAAA+GGG 0.589326 2_4:-56658107 None:intergenic
GTCAGCAGCTTCTTGAACGG+TGG 0.593457 2_4:-56662411 None:intergenic
ACAGAAAATTGTGGTAGGAG+TGG 0.595163 2_4:-56664663 None:intergenic
AGGAAGACAACATATTCTTG+TGG 0.600574 2_4:+56660337 Msa0337020:five_prime_UTR
AGATTGTAAAAGAAAGGGAA+AGG 0.601542 2_4:-56658108 None:intergenic
TGGTGCACTACAAGAAGCAT+TGG 0.601818 2_4:+56663254 Msa0337020:CDS
GGGGAATCCAATCCCACCGC+CGG 0.602871 2_4:-56658047 None:intergenic
AGAGTGTTGCAAAGATGGGC+TGG 0.604480 2_4:+56663096 Msa0337020:intron
TTCTGCTTGCTAGAGACAAG+GGG 0.610990 2_4:+56658960 Msa0337020:five_prime_UTR
GGCTTAAACTAGCAAAGAGG+AGG 0.615054 2_4:+56662460 Msa0337020:five_prime_UTR
GTGTATGAGTACATGACAAG+AGG 0.617548 2_4:+56660719 Msa0337020:five_prime_UTR
GGTTGACAGAAAATTGTGGT+AGG 0.623111 2_4:-56664668 None:intergenic
GGACGACAATGAGAGAGGGG+AGG 0.623287 2_4:-56658086 None:intergenic
GATTTCCAAAATCTAGACCA+TGG 0.623478 2_4:+56663579 Msa0337020:three_prime_UTR
GGTGGAATTTGGCATTAGTG+TGG 0.628201 2_4:+56662364 Msa0337020:five_prime_UTR
GTGCAGGTTGAGATTGTGAT+GGG 0.630018 2_4:+56662335 Msa0337020:intron
TGTGAGAGCTGCAGTTGCTG+AGG 0.635354 2_4:-56660949 None:intergenic
AGCATTGGCAGCTCTTCGTG+AGG 0.642510 2_4:+56663269 Msa0337020:CDS
ACTGTTGTGAGGAGGAGCAG+AGG 0.644291 2_4:+56660690 Msa0337020:five_prime_UTR
GGTCAGAAACAATCTCTGCA+TGG 0.646078 2_4:-56663341 None:intergenic
TGTGCAGGTTGAGATTGTGA+TGG 0.647380 2_4:+56662334 Msa0337020:intron
TACCATCCAGATGAGTGCAA+AGG 0.651843 2_4:+56659377 Msa0337020:five_prime_UTR
ACTTGGTTGACAGAAAATTG+TGG 0.654452 2_4:-56664672 None:intergenic
AGTGCCGGAGAAGAAGTCGC+CGG 0.654528 2_4:+56657994 Msa0337020:five_prime_UTR
ATTGCATTAGGTGCAGCTAA+GGG 0.656681 2_4:+56660908 Msa0337020:five_prime_UTR
ACCTTGCAGTCAGATGTGGA+TGG 0.659433 2_4:+56661767 Msa0337020:intron
CAAGGCTTAAACTAGCAAAG+AGG 0.660316 2_4:+56662457 Msa0337020:five_prime_UTR
TAGTGATCCTATGATAGAGG+TGG 0.661110 2_4:+56658720 Msa0337020:five_prime_UTR
AGTACCGGAGAAGAATTCGC+CGG 0.663293 2_4:+56658028 Msa0337020:five_prime_UTR
ATTCATCGCCAGTAATACCC+AGG 0.664118 2_4:-56663362 None:intergenic
TGTATGAGTACATGACAAGA+GGG 0.666417 2_4:+56660720 Msa0337020:five_prime_UTR
AAGGGACGACAATGAGAGAG+GGG 0.666541 2_4:-56658089 None:intergenic
TGATTGGACTGTCAGATGAG+TGG 0.670291 2_4:+56660288 Msa0337020:intron
GCCGGAGAAGAAGTCGCCGG+CGG 0.671593 2_4:+56657997 Msa0337020:five_prime_UTR
TTGCAGTCAGATGTGGATGG+AGG 0.675350 2_4:+56661770 Msa0337020:intron
AATTGGATACTGTTGTGAGG+AGG 0.680705 2_4:+56660682 Msa0337020:five_prime_UTR
GTGCAAAGGAAGAGATTGTG+GGG 0.684414 2_4:+56659391 Msa0337020:five_prime_UTR
TTTCCAAAATCTAGACCATG+GGG 0.691648 2_4:+56663581 Msa0337020:three_prime_UTR
CCTAATTGGATACTGTTGTG+AGG 0.693032 2_4:+56660679 Msa0337020:five_prime_UTR
GATACTCTGCTACATTACCA+TGG 0.696698 2_4:+56660870 Msa0337020:five_prime_UTR
ACCGGAGAAGAATTCGCCGG+CGG 0.697852 2_4:+56658031 Msa0337020:five_prime_UTR
ACAGCGAACATGGTATCTGG+AGG 0.716874 2_4:+56663130 Msa0337020:CDS
ATTGCAAGATCACCTTAACA+GGG 0.717743 2_4:-56661689 None:intergenic
ATAGGTTATGTGGATCAATG+GGG 0.754994 2_4:+56661657 Msa0337020:five_prime_UTR
TTCCAAAATCTAGACCATGG+GGG 0.778249 2_4:+56663582 Msa0337020:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+GGG - chr2_4:56664987-56665006 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr2_4:56664988-56665007 None:intergenic 0.0%
!! ATTTAGTTGTTATAATTAAT+TGG + chr2_4:56659499-56659518 Msa0337020:intron 10.0%
!! TTTAGTTGTTATAATTAATT+GGG + chr2_4:56659500-56659519 Msa0337020:intron 10.0%
!! AAATATTAATCCATTATATT+GGG - chr2_4:56659770-56659789 None:intergenic 10.0%
!! AAAATATTAATCCATTATAT+TGG - chr2_4:56659771-56659790 None:intergenic 10.0%
!!! ATTAATATTTTACTGAATAA+GGG + chr2_4:56659780-56659799 Msa0337020:intron 10.0%
!! AAATATTAATCCATTATATT+GGG - chr2_4:56659770-56659789 None:intergenic 10.0%
!! AAAATATTAATCCATTATAT+TGG - chr2_4:56659771-56659790 None:intergenic 10.0%
!!! ATTAATATTTTACTGAATAA+GGG + chr2_4:56659780-56659799 Msa0337020:intron 10.0%
!! ATATGTATATAATATAGTAT+TGG - chr2_4:56660796-56660815 None:intergenic 10.0%
!! TATAAAATATAATAGTAGTT+GGG - chr2_4:56662033-56662052 None:intergenic 10.0%
!!! TTTTTTTTGAAATTTTGTAC+TGG + chr2_4:56658337-56658356 Msa0337020:intron 15.0%
!!! TTTTTTTGAAATTTTGTACT+GGG + chr2_4:56658338-56658357 Msa0337020:intron 15.0%
!! TCTAAATAGATATAAAAATG+TGG + chr2_4:56659291-56659310 Msa0337020:intron 15.0%
!!! TTTTTAGATCCTTAAATATA+TGG + chr2_4:56659533-56659552 Msa0337020:intron 15.0%
!!! GATTAATATTTTACTGAATA+AGG + chr2_4:56659779-56659798 Msa0337020:intron 15.0%
!!! GATTAATATTTTACTGAATA+AGG + chr2_4:56659779-56659798 Msa0337020:intron 15.0%
!!! TTGATAATTGAAATGTAAAT+TGG + chr2_4:56660546-56660565 Msa0337020:five_prime_UTR 15.0%
!!! ATATGTTTTGATCTTATTTA+AGG + chr2_4:56661212-56661231 Msa0337020:intron 15.0%
!! AATTAAAAAAAAAAGGATTG+TGG + chr2_4:56661308-56661327 Msa0337020:intron 15.0%
!! AACATTTGAAGAATAAAAAA+GGG - chr2_4:56661547-56661566 None:intergenic 15.0%
!! AAACATTTGAAGAATAAAAA+AGG - chr2_4:56661548-56661567 None:intergenic 15.0%
!! CTTTCATAAAAAAAATAGTA+CGG + chr2_4:56661862-56661881 Msa0337020:intron 15.0%
!! TTTCATAAAAAAAATAGTAC+GGG + chr2_4:56661863-56661882 Msa0337020:intron 15.0%
!! CTATAAAATATAATAGTAGT+TGG - chr2_4:56662034-56662053 None:intergenic 15.0%
!!! CTATTATATTTTATAGTAGT+TGG + chr2_4:56662038-56662057 Msa0337020:intron 15.0%
!!! TTATCTAAAATGATTCTTAA+AGG - chr2_4:56662725-56662744 None:intergenic 15.0%
!! GCTTGATTAATATAAAAATA+TGG - chr2_4:56662890-56662909 None:intergenic 15.0%
!! TTCAAAATTATTATGTAGAA+CGG - chr2_4:56662972-56662991 None:intergenic 15.0%
!!! TTTTCGTATCAAAATATTTA+TGG - chr2_4:56663521-56663540 None:intergenic 15.0%
!!! TAACTTTTTAGTTCATTTTA+TGG + chr2_4:56664225-56664244 Msa0337020:intron 15.0%
!! ACAATGAATTCAATTAAAAA+AGG - chr2_4:56664449-56664468 None:intergenic 15.0%
!!! TCTTATATGTATTTTATAGA+AGG + chr2_4:56664521-56664540 Msa0337020:intron 15.0%
!! AAGCAGAATATATATATATA+TGG + chr2_4:56664777-56664796 Msa0337020:intron 15.0%
!! AGCAGAATATATATATATAT+GGG + chr2_4:56664778-56664797 Msa0337020:intron 15.0%
!!! TTGATAATCTTGTTGAAAAA+GGG - chr2_4:56658146-56658165 None:intergenic 20.0%
!!! TGTTTCATATCAAATTTGTT+TGG + chr2_4:56658295-56658314 Msa0337020:intron 20.0%
!!! GTTTCATATCAAATTTGTTT+GGG + chr2_4:56658296-56658315 Msa0337020:intron 20.0%
!!! TTTGATTATTGAGTTTTGAT+CGG + chr2_4:56658362-56658381 Msa0337020:intron 20.0%
!!! TTTGTTTTGTTGTTTGTTTT+TGG + chr2_4:56658424-56658443 Msa0337020:intron 20.0%
!!! TTTGGATGATTTTGTATTAT+CGG + chr2_4:56658442-56658461 Msa0337020:intron 20.0%
!!! TGTTGATTTGAATATGAATT+TGG + chr2_4:56658465-56658484 Msa0337020:intron 20.0%
!!! TGAATATGAATTTGGTTTTT+TGG + chr2_4:56658473-56658492 Msa0337020:intron 20.0%
!!! GAATATGAATTTGGTTTTTT+GGG + chr2_4:56658474-56658493 Msa0337020:intron 20.0%
!!! TTGTAGCTTAAATTTTGAAT+TGG + chr2_4:56658546-56658565 Msa0337020:intron 20.0%
!!! TGTAGCTTAAATTTTGAATT+GGG + chr2_4:56658547-56658566 Msa0337020:intron 20.0%
!! AGATTTGATGAAGATTAAAA+TGG + chr2_4:56658598-56658617 Msa0337020:intron 20.0%
!! GATTTGATGAAGATTAAAAT+GGG + chr2_4:56658599-56658618 Msa0337020:intron 20.0%
!! TATCTGTAATTGTAAATTTG+TGG + chr2_4:56658815-56658834 Msa0337020:intron 20.0%
!!! ATATTCTACTATTGATGATT+TGG + chr2_4:56658991-56659010 Msa0337020:five_prime_UTR 20.0%
!!! ATGTTTTGATGTAAACAATT+AGG + chr2_4:56659036-56659055 Msa0337020:intron 20.0%
!!! GTTTTTCTTGATGAATATTT+GGG + chr2_4:56659337-56659356 Msa0337020:intron 20.0%
!!! GGATAATTTAGTGAAATTTT+AGG - chr2_4:56659458-56659477 None:intergenic 20.0%
!! TAACTATGCAATGAAAATTA+AGG - chr2_4:56659479-56659498 None:intergenic 20.0%
!! TATCAATGTCCATATATTTA+AGG - chr2_4:56659545-56659564 None:intergenic 20.0%
!! AATAGTGTATTTCAAATCAA+TGG - chr2_4:56659641-56659660 None:intergenic 20.0%
!!! CTTGAATTTTTTTTAGTAAG+TGG + chr2_4:56659735-56659754 Msa0337020:intron 20.0%
!! AATAGTGTATTTCAAATCAA+TGG - chr2_4:56659641-56659660 None:intergenic 20.0%
!!! AGATTTGAATTTTTAGTAAG+TGG + chr2_4:56659993-56660012 Msa0337020:intron 20.0%
!!! ATTGTTTCTTTATTTTGTTG+AGG + chr2_4:56660158-56660177 Msa0337020:intron 20.0%
!! AATGCAAAACATTAATATCT+AGG - chr2_4:56660264-56660283 None:intergenic 20.0%
!!! AAGCATAGACATATTTTAAT+TGG - chr2_4:56661041-56661060 None:intergenic 20.0%
!! CTATAAACACCTTAAAATAA+TGG - chr2_4:56661173-56661192 None:intergenic 20.0%
!!! TTTACAATTTTAAAATCTGC+AGG + chr2_4:56661608-56661627 Msa0337020:intron 20.0%
!!! TTACAATTTTAAAATCTGCA+GGG + chr2_4:56661609-56661628 Msa0337020:intron 20.0%
!! CTATTTATAGACTAATTTGA+AGG + chr2_4:56662069-56662088 Msa0337020:intron 20.0%
!! GGATCAAAATATTATCAAAA+TGG - chr2_4:56662650-56662669 None:intergenic 20.0%
!!! TGATAATATTTTGATCCTTT+TGG + chr2_4:56662653-56662672 Msa0337020:intron 20.0%
!! AAAAATATGGAACAAAGTAT+AGG - chr2_4:56662877-56662896 None:intergenic 20.0%
!! AAAAAGGATAAATTAAACAG+TGG - chr2_4:56663158-56663177 None:intergenic 20.0%
!!! TGTTGATTGTCTTAAAATTA+TGG + chr2_4:56663544-56663563 Msa0337020:three_prime_UTR 20.0%
!! AATATTGAAACAGAACAATA+TGG - chr2_4:56663768-56663787 None:intergenic 20.0%
!! AAAACATTGAATGTCAAATT+TGG - chr2_4:56664036-56664055 None:intergenic 20.0%
!! ACAAGTTTATTATTCAATGT+TGG + chr2_4:56664118-56664137 Msa0337020:intron 20.0%
!! ATGAACTAAAAAGTTAAAGT+AGG - chr2_4:56664221-56664240 None:intergenic 20.0%
!!! ATATGTATTTTATAGAAGGT+TGG + chr2_4:56664525-56664544 Msa0337020:intron 20.0%
!!! GTTGATAATCTTGTTGAAAA+AGG - chr2_4:56658147-56658166 None:intergenic 25.0%
! AGACATTTCTGATATGAAAA+TGG - chr2_4:56658260-56658279 None:intergenic 25.0%
!! AAAATTGAGAATTGGTTTAG+TGG + chr2_4:56658390-56658409 Msa0337020:intron 25.0%
!! AAATTGAGAATTGGTTTAGT+GGG + chr2_4:56658391-56658410 Msa0337020:intron 25.0%
!!! TTGGGTTTCATATGTTTTTT+TGG + chr2_4:56658492-56658511 Msa0337020:intron 25.0%
! AAACTGAAAAAGATTTGAGT+AGG + chr2_4:56658656-56658675 Msa0337020:intron 25.0%
! GTAATTGTAAATTTGTGGTA+AGG + chr2_4:56658820-56658839 Msa0337020:intron 25.0%
! TAAAATGTAAAGTGCATACA+AGG + chr2_4:56658870-56658889 Msa0337020:five_prime_UTR 25.0%
! TCAATAATAGACATCAACTA+TGG - chr2_4:56659087-56659106 None:intergenic 25.0%
!!! TTTGATTGATCTGTTTTTAC+AGG + chr2_4:56659252-56659271 Msa0337020:intron 25.0%
!!! ATCGTAATTGGATTTGTTTT+AGG + chr2_4:56659315-56659334 Msa0337020:intron 25.0%
!! GGTTTTTCTTGATGAATATT+TGG + chr2_4:56659336-56659355 Msa0337020:intron 25.0%
! GTTCAAATGCACAATTTATT+TGG + chr2_4:56659684-56659703 Msa0337020:intron 25.0%
! GTTCAAATGCACAATTTATT+TGG + chr2_4:56659684-56659703 Msa0337020:intron 25.0%
!!! GTACCAATGTTTCATTTTTT+TGG + chr2_4:56660124-56660143 Msa0337020:intron 25.0%
! TCACCAAAAAAATGAAACAT+TGG - chr2_4:56660130-56660149 None:intergenic 25.0%
! CTATTAGTTAAACACATGTT+TGG - chr2_4:56660224-56660243 None:intergenic 25.0%
!! ATGTTTTGCATTTTTGTGAT+TGG + chr2_4:56660272-56660291 Msa0337020:intron 25.0%
!!! TATATTTTTGCTTCTTCAAG+AGG - chr2_4:56660415-56660434 None:intergenic 25.0%
! GCAAAAATATATATCCATGA+AGG + chr2_4:56660424-56660443 Msa0337020:five_prime_UTR 25.0%
!!! TAATCTCTTTTTAGTGTTTC+CGG + chr2_4:56660466-56660485 Msa0337020:five_prime_UTR 25.0%
! AAATTGAAAAACACAAACAC+CGG - chr2_4:56660488-56660507 None:intergenic 25.0%
!! TTCATAGTATCTGAACTTTT+AGG + chr2_4:56660613-56660632 Msa0337020:five_prime_UTR 25.0%
! CATATATTAATCATGCTGTA+AGG + chr2_4:56660811-56660830 Msa0337020:intron 25.0%
! ACTAGAATGAAAATTGCATT+AGG + chr2_4:56660896-56660915 Msa0337020:five_prime_UTR 25.0%
! GATCAAAACATATAAAGCTT+GGG - chr2_4:56661205-56661224 None:intergenic 25.0%
! AGATCAAAACATATAAAGCT+TGG - chr2_4:56661206-56661225 None:intergenic 25.0%
! TTGATGTATATATTTCCACT+AGG + chr2_4:56661369-56661388 Msa0337020:intron 25.0%
! TGATGTATATATTTCCACTA+GGG + chr2_4:56661370-56661389 Msa0337020:intron 25.0%
! TTTGAAAGAAAAAGAAAGTC+AGG - chr2_4:56661748-56661767 None:intergenic 25.0%
!!! ATATTTGACTTGAGTAGTTT+GGG + chr2_4:56661835-56661854 Msa0337020:intron 25.0%
!! CTTTTTCCACTCTTAATTAA+TGG - chr2_4:56661921-56661940 None:intergenic 25.0%
!! TCTATTTTACATATGTATGC+AGG - chr2_4:56661996-56662015 None:intergenic 25.0%
! CTAATTATTTGATTCATAGC+AGG + chr2_4:56662231-56662250 Msa0337020:intron 25.0%
! ATTTACATTTCAAATTGTGC+AGG + chr2_4:56662319-56662338 Msa0337020:intron 25.0%
! AATGCAGATATTAATCATCT+TGG - chr2_4:56663003-56663022 None:intergenic 25.0%
! CTGCATTTATATGAATGAAA+AGG + chr2_4:56663016-56663035 Msa0337020:intron 25.0%
! ACACAACTGATAAAAATTTG+AGG - chr2_4:56664175-56664194 None:intergenic 25.0%
! ATGATAAGAAATAAAAGCCA+TGG - chr2_4:56664407-56664426 None:intergenic 25.0%
!! ATAGAAGACACATTTTATGA+AGG - chr2_4:56664959-56664978 None:intergenic 25.0%
GATTGTAAAAGAAAGGGAAA+GGG - chr2_4:56658110-56658129 None:intergenic 30.0%
AGATTGTAAAAGAAAGGGAA+AGG - chr2_4:56658111-56658130 None:intergenic 30.0%
GGTGAAGATTGTAAAAGAAA+GGG - chr2_4:56658116-56658135 None:intergenic 30.0%
TGGTGAAGATTGTAAAAGAA+AGG - chr2_4:56658117-56658136 None:intergenic 30.0%
! TTGTTGAAAAAGGGAAGTTT+TGG - chr2_4:56658137-56658156 None:intergenic 30.0%
AGAAATGTCTCTCTTTGAAT+CGG + chr2_4:56658270-56658289 Msa0337020:intron 30.0%
TGGATTTCTGACTATGTTAT+TGG + chr2_4:56658754-56658773 Msa0337020:five_prime_UTR 30.0%
GGATTTCTGACTATGTTATT+GGG + chr2_4:56658755-56658774 Msa0337020:five_prime_UTR 30.0%
AGCTAAATACATTGTAAAGC+TGG + chr2_4:56658921-56658940 Msa0337020:five_prime_UTR 30.0%
GCTAAATACATTGTAAAGCT+GGG + chr2_4:56658922-56658941 Msa0337020:five_prime_UTR 30.0%
GTATGACTAGGAATATAAGA+TGG + chr2_4:56659123-56659142 Msa0337020:intron 30.0%
! CTTATGGTGTTCAAGTTAAA+TGG - chr2_4:56659152-56659171 None:intergenic 30.0%
TAAAAATGTGGCATCGTAAT+TGG + chr2_4:56659303-56659322 Msa0337020:intron 30.0%
GTATTTCAAATCAATGGTGA+AGG - chr2_4:56659635-56659654 None:intergenic 30.0%
!!! ATAAGGGTTTTGAAGTTTGT+AGG + chr2_4:56659796-56659815 Msa0337020:intron 30.0%
! TTTGAAGTTTGTAGGATTGA+TGG + chr2_4:56659804-56659823 Msa0337020:intron 30.0%
! CAGTGAGATTTAAGATCAAT+CGG + chr2_4:56659829-56659848 Msa0337020:intron 30.0%
GTATTTCAAATCAATGGTGA+AGG - chr2_4:56659635-56659654 None:intergenic 30.0%
!!! ATAAGGGTTTTGAAGTTTGT+AGG + chr2_4:56659796-56659815 Msa0337020:intron 30.0%
! TTTGAAGTTTGTAGGATTGA+TGG + chr2_4:56659804-56659823 Msa0337020:intron 30.0%
! GAACTTTGATATAAAAGTGC+AGG + chr2_4:56660098-56660117 Msa0337020:five_prime_UTR 30.0%
! AGTTTTTGCCAAAATTACAG+TGG + chr2_4:56660186-56660205 Msa0337020:intron 30.0%
CATGTGTTTAACTAATAGTG+TGG + chr2_4:56660226-56660245 Msa0337020:intron 30.0%
TTGTGGAAAAGAACAATAAC+CGG + chr2_4:56660354-56660373 Msa0337020:five_prime_UTR 30.0%
TTTCCAGTAGCAATATATGA+TGG + chr2_4:56660505-56660524 Msa0337020:five_prime_UTR 30.0%
!! ATTTTCATTCTAGTTGACCA+TGG - chr2_4:56660890-56660909 None:intergenic 30.0%
!! TACGAGAAGCCATTATTTTA+AGG + chr2_4:56661161-56661180 Msa0337020:intron 30.0%
TATCTTGAGTACTCTGATAT+AGG + chr2_4:56661346-56661365 Msa0337020:intron 30.0%
TTATTCTTCAAATGTTTGCC+AGG + chr2_4:56661551-56661570 Msa0337020:intron 30.0%
TGCAAAAAATACGATAAACC+TGG - chr2_4:56661572-56661591 None:intergenic 30.0%
ATCAAAGATGGACAAGTTAT+AGG + chr2_4:56661639-56661658 Msa0337020:five_prime_UTR 30.0%
TTATAGGTTATGTGGATCAA+TGG + chr2_4:56661655-56661674 Msa0337020:five_prime_UTR 30.0%
TATAGGTTATGTGGATCAAT+GGG + chr2_4:56661656-56661675 Msa0337020:five_prime_UTR 30.0%
!! GATATTTGACTTGAGTAGTT+TGG + chr2_4:56661834-56661853 Msa0337020:intron 30.0%
ATGCTTCCATTAATTAAGAG+TGG + chr2_4:56661912-56661931 Msa0337020:intron 30.0%
TTGACGAAGATCAAAGAAAA+TGG + chr2_4:56661944-56661963 Msa0337020:intron 30.0%
ATAGACTAATTTGAAGGCTA+TGG + chr2_4:56662075-56662094 Msa0337020:intron 30.0%
GCAACAGAAATTAAATCAAC+AGG - chr2_4:56662117-56662136 None:intergenic 30.0%
AGGAAAATCAGAATAGTGTT+TGG + chr2_4:56662251-56662270 Msa0337020:intron 30.0%
! ATTTACCCTTTTGACATGTA+AGG - chr2_4:56662486-56662505 None:intergenic 30.0%
TAAATATCGTTAGACTGGAA+CGG + chr2_4:56662501-56662520 Msa0337020:intron 30.0%
TTTCTAACAACACAAACTCT+TGG - chr2_4:56662791-56662810 None:intergenic 30.0%
! ATGATAGTTATGTTTTCGAC+TGG + chr2_4:56662818-56662837 Msa0337020:intron 30.0%
! TGATAGTTATGTTTTCGACT+GGG + chr2_4:56662819-56662838 Msa0337020:intron 30.0%
GCTAACCAAAAAGGAAAATT+CGG - chr2_4:56662912-56662931 None:intergenic 30.0%
CATTATGTTGCTAACCAAAA+AGG - chr2_4:56662921-56662940 None:intergenic 30.0%
TCTGCAAGAATACAAAATGT+AGG - chr2_4:56663079-56663098 None:intergenic 30.0%
GTGGTAGAGTTAAGATAAAA+AGG - chr2_4:56663174-56663193 None:intergenic 30.0%
AGTTAAAATGGAGTGAATAG+TGG - chr2_4:56663193-56663212 None:intergenic 30.0%
! TTGGGTCATTTGAGTTAAAA+TGG - chr2_4:56663205-56663224 None:intergenic 30.0%
! TTGCTGTTGATGAATACTTT+GGG + chr2_4:56663451-56663470 Msa0337020:CDS 30.0%
! ATAGATGCACCAATTTTCTT+TGG - chr2_4:56663482-56663501 None:intergenic 30.0%
!! ATGGTCTAGATTTTGGAAAT+CGG - chr2_4:56663580-56663599 None:intergenic 30.0%
ATTTCCAAAATCTAGACCAT+GGG + chr2_4:56663580-56663599 Msa0337020:three_prime_UTR 30.0%
!! TTGCATTTTGACATGTTTGA+TGG + chr2_4:56663856-56663875 Msa0337020:intron 30.0%
CCTCTCTACAAAAGAAAAAT+TGG - chr2_4:56663884-56663903 None:intergenic 30.0%
! CCAATTTTTCTTTTGTAGAG+AGG + chr2_4:56663881-56663900 Msa0337020:intron 30.0%
TTATGATCATTTCCAAGAAC+AGG - chr2_4:56663963-56663982 None:intergenic 30.0%
ATTCACTTCATAGTTCTTAC+TGG - chr2_4:56664008-56664027 None:intergenic 30.0%
TAGAAAGATGTCACATTGTA+GGG - chr2_4:56664152-56664171 None:intergenic 30.0%
ACGTGAATAGCAAAGAAAAT+AGG - chr2_4:56664259-56664278 None:intergenic 30.0%
!! AATACTGAAAGCATTTCAGA+AGG + chr2_4:56664375-56664394 Msa0337020:intron 30.0%
!! ATACTGAAAGCATTTCAGAA+GGG + chr2_4:56664376-56664395 Msa0337020:intron 30.0%
GCAAAATAACATCTTGTCTT+TGG + chr2_4:56664608-56664627 Msa0337020:three_prime_UTR 30.0%
ATGTTGGAAAAAAGATGAAC+CGG - chr2_4:56664746-56664765 None:intergenic 30.0%
!!! TTCATCTTTTTTCCAACATC+TGG + chr2_4:56664747-56664766 Msa0337020:three_prime_UTR 30.0%
! TTTTAACAAGTCACACCTTA+AGG + chr2_4:56664831-56664850 Msa0337020:intron 30.0%
AAAGTGAAAATCACACCTTA+AGG - chr2_4:56664849-56664868 None:intergenic 30.0%
ACACCTTCATAAAAGTAAGT+TGG + chr2_4:56664891-56664910 Msa0337020:intron 30.0%
!! ACACCAACTTACTTTTATGA+AGG - chr2_4:56664897-56664916 None:intergenic 30.0%
!! ATCCTTTTAGTTGAGTGCTT+TGG + chr2_4:56658180-56658199 Msa0337020:five_prime_UTR 35.0%
TGAAAATGGATCGATCAACA+GGG - chr2_4:56658246-56658265 None:intergenic 35.0%
ATGAAAATGGATCGATCAAC+AGG - chr2_4:56658247-56658266 None:intergenic 35.0%
!! GATTATTGAGTTTTGATCGG+TGG + chr2_4:56658365-56658384 Msa0337020:intron 35.0%
CGGTGGAAAAAATTGAGAAT+TGG + chr2_4:56658382-56658401 Msa0337020:intron 35.0%
TGAATTGGGTGTTCTTATTG+AGG + chr2_4:56658561-56658580 Msa0337020:intron 35.0%
AGATAGTGATCCTATGATAG+AGG + chr2_4:56658717-56658736 Msa0337020:five_prime_UTR 35.0%
! GCATTTATTGTCATTTCTGC+AGG + chr2_4:56658842-56658861 Msa0337020:intron 35.0%
TGTAAAGTGCATACAAGGAT+TGG + chr2_4:56658875-56658894 Msa0337020:five_prime_UTR 35.0%
!! ATCAACTATGGTTTTTGAGC+CGG - chr2_4:56659075-56659094 None:intergenic 35.0%
! CGTGAATAGAAAGTATGACT+AGG + chr2_4:56659111-56659130 Msa0337020:intron 35.0%
AAGCATCAGTCATTCACTTA+TGG - chr2_4:56659168-56659187 None:intergenic 35.0%
! TGAATGACTGATGCTTTTGT+AGG + chr2_4:56659172-56659191 Msa0337020:intron 35.0%
! GCAGTTTTACTTGATCAATG+AGG + chr2_4:56659415-56659434 Msa0337020:five_prime_UTR 35.0%
! GACTAAAGTGCCCAATATAA+TGG + chr2_4:56659757-56659776 Msa0337020:intron 35.0%
! GACTAAAGTGCCCAATATAA+TGG + chr2_4:56659757-56659776 Msa0337020:intron 35.0%
!! ACAATGTGCCACTGTAATTT+TGG - chr2_4:56660197-56660216 None:intergenic 35.0%
AAGAATATGTTGTCTTCCTC+AGG - chr2_4:56660336-56660355 None:intergenic 35.0%
AGGAAGACAACATATTCTTG+TGG + chr2_4:56660337-56660356 Msa0337020:five_prime_UTR 35.0%
AAACACTGTATCTTTGCTTC+CGG - chr2_4:56660376-56660395 None:intergenic 35.0%
ATTGAAACACTTGACCTTCA+TGG - chr2_4:56660441-56660460 None:intergenic 35.0%
GATCCATCATATATTGCTAC+TGG - chr2_4:56660511-56660530 None:intergenic 35.0%
!!! CTTTTAGGATTGCTTCAATG+AGG + chr2_4:56660628-56660647 Msa0337020:five_prime_UTR 35.0%
GTTCTTCATTGTTGCCTAAT+TGG + chr2_4:56660665-56660684 Msa0337020:five_prime_UTR 35.0%
TGTATGAGTACATGACAAGA+GGG + chr2_4:56660720-56660739 Msa0337020:five_prime_UTR 35.0%
! TTCTTTGTTGTGATTCAAGC+AGG + chr2_4:56660848-56660867 Msa0337020:intron 35.0%
ACTGCACACTAATCCAAATT+GGG - chr2_4:56661006-56661025 None:intergenic 35.0%
AACTGCACACTAATCCAAAT+TGG - chr2_4:56661007-56661026 None:intergenic 35.0%
ATGTTACCCTAGATGAAGAT+TGG - chr2_4:56661261-56661280 None:intergenic 35.0%
ACAACGTAAAATTACCCTAG+TGG - chr2_4:56661387-56661406 None:intergenic 35.0%
TATGTTGTCATGTGACTGTA+AGG + chr2_4:56661406-56661425 Msa0337020:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr2_4:56661458-56661477 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr2_4:56661457-56661476 Msa0337020:intron 35.0%
AAGAATAAAAAAGGGCAACC+CGG - chr2_4:56661539-56661558 None:intergenic 35.0%
TGGACAAGTTATAGGTTATG+TGG + chr2_4:56661647-56661666 Msa0337020:five_prime_UTR 35.0%
ATAGGTTATGTGGATCAATG+GGG + chr2_4:56661657-56661676 Msa0337020:five_prime_UTR 35.0%
ATTGCAAGATCACCTTAACA+GGG - chr2_4:56661692-56661711 None:intergenic 35.0%
AATTGCAAGATCACCTTAAC+AGG - chr2_4:56661693-56661712 None:intergenic 35.0%
AAGCAGTAACTATTTGCAAC+TGG - chr2_4:56662182-56662201 None:intergenic 35.0%
GCTTGAGCTATATGATCAAA+TGG + chr2_4:56662198-56662217 Msa0337020:intron 35.0%
AAGGGTAAATATCGTTAGAC+TGG + chr2_4:56662496-56662515 Msa0337020:intron 35.0%
AAATATCGTTAGACTGGAAC+GGG + chr2_4:56662502-56662521 Msa0337020:intron 35.0%
CAAAATGGTTGACTAACCAA+GGG - chr2_4:56662635-56662654 None:intergenic 35.0%
TCAAAATGGTTGACTAACCA+AGG - chr2_4:56662636-56662655 None:intergenic 35.0%
! TGATCCTTTTGGTATGCTTT+TGG + chr2_4:56662664-56662683 Msa0337020:intron 35.0%
! AACACCAAAAGCATACCAAA+AGG - chr2_4:56662671-56662690 None:intergenic 35.0%
! TATGTTTTCGACTGGGTTAA+AGG + chr2_4:56662826-56662845 Msa0337020:intron 35.0%
! TCAAGCCGAATTTTCCTTTT+TGG + chr2_4:56662904-56662923 Msa0337020:intron 35.0%
AATTGTACACTATCTTGACG+AGG + chr2_4:56663046-56663065 Msa0337020:intron 35.0%
ATAAACATTGCAGCTGTATC+GGG - chr2_4:56663303-56663322 None:intergenic 35.0%
GATAAACATTGCAGCTGTAT+CGG - chr2_4:56663304-56663323 None:intergenic 35.0%
! CAAGTTCATCGGTTAATGAT+AGG + chr2_4:56663385-56663404 Msa0337020:CDS 35.0%
! GCAACTACATCTTCATTTTC+AGG - chr2_4:56663435-56663454 None:intergenic 35.0%
! GTTGCTGTTGATGAATACTT+TGG + chr2_4:56663450-56663469 Msa0337020:CDS 35.0%
TGGGCAATACCAAAGAAAAT+TGG + chr2_4:56663470-56663489 Msa0337020:CDS 35.0%
AAAATTGGTGCATCTATGCA+TGG + chr2_4:56663485-56663504 Msa0337020:CDS 35.0%
GATTTCCAAAATCTAGACCA+TGG + chr2_4:56663579-56663598 Msa0337020:three_prime_UTR 35.0%
TTTCCAAAATCTAGACCATG+GGG + chr2_4:56663581-56663600 Msa0337020:three_prime_UTR 35.0%
CAAATGCACAGTACATGAAA+TGG - chr2_4:56663699-56663718 None:intergenic 35.0%
TTCAGGAAGGTAAATGTCAA+CGG + chr2_4:56663725-56663744 Msa0337020:intron 35.0%
! AACAGAACAATATGGTTCTG+TGG - chr2_4:56663760-56663779 None:intergenic 35.0%
CATATAATGTGTTCAGTGCT+AGG + chr2_4:56663805-56663824 Msa0337020:intron 35.0%
AAATGCAAACCCTATCCAAA+AGG - chr2_4:56663844-56663863 None:intergenic 35.0%
AGAAAGATGTCACATTGTAG+GGG - chr2_4:56664151-56664170 None:intergenic 35.0%
GTAGAAAGATGTCACATTGT+AGG - chr2_4:56664153-56664172 None:intergenic 35.0%
CATGCAAAGAAGTAAGATAC+TGG - chr2_4:56664294-56664313 None:intergenic 35.0%
TTCTTTGCATGTTGCTCATA+TGG + chr2_4:56664303-56664322 Msa0337020:intron 35.0%
!! TACTGAAAGCATTTCAGAAG+GGG + chr2_4:56664377-56664396 Msa0337020:intron 35.0%
ACTTGGTTGACAGAAAATTG+TGG - chr2_4:56664675-56664694 None:intergenic 35.0%
AAGTTGTTCAGCTTCTTGAA+CGG + chr2_4:56664691-56664710 Msa0337020:three_prime_UTR 35.0%
CATTGAACTAAACACACTTC+CGG + chr2_4:56664724-56664743 Msa0337020:three_prime_UTR 35.0%
!!! TTTTTTCCAACATCTGGATG+TGG + chr2_4:56664753-56664772 Msa0337020:three_prime_UTR 35.0%
! TTTTTCCAACATCTGGATGT+GGG + chr2_4:56664754-56664773 Msa0337020:three_prime_UTR 35.0%
TGTTAAAAGACACCACCAAA+GGG - chr2_4:56664819-56664838 None:intergenic 35.0%
TTGTTAAAAGACACCACCAA+AGG - chr2_4:56664820-56664839 None:intergenic 35.0%
! CTCCAAAGCACTCAACTAAA+AGG - chr2_4:56658185-56658204 None:intergenic 40.0%
!! TTTAGTTGAGTGCTTTGGAG+TGG + chr2_4:56658185-56658204 Msa0337020:five_prime_UTR 40.0%
! TGAGAATTGGTTTAGTGGGT+CGG + chr2_4:56658395-56658414 Msa0337020:intron 40.0%
TAGTGATCCTATGATAGAGG+TGG + chr2_4:56658720-56658739 Msa0337020:five_prime_UTR 40.0%
ATCCTATGATAGAGGTGGTT+TGG + chr2_4:56658725-56658744 Msa0337020:five_prime_UTR 40.0%
TCCTATGATAGAGGTGGTTT+GGG + chr2_4:56658726-56658745 Msa0337020:five_prime_UTR 40.0%
! GGTAAGAGTTCATTTTCCAG+AGG + chr2_4:56658776-56658795 Msa0337020:intron 40.0%
! AGCTGAGCATTTAAAACCTC+TGG - chr2_4:56658795-56658814 None:intergenic 40.0%
AGTGCAAAGGAAGAGATTGT+GGG + chr2_4:56659390-56659409 Msa0337020:five_prime_UTR 40.0%
GAACAAAACATGACTGTGAG+TGG - chr2_4:56659668-56659687 None:intergenic 40.0%
GAACAAAACATGACTGTGAG+TGG - chr2_4:56659668-56659687 None:intergenic 40.0%
! GATTGATGGTTCAGTGAGAT+TGG + chr2_4:56659818-56659837 Msa0337020:intron 40.0%
!! TGGTATATCTGCTTTTCCTG+AGG + chr2_4:56660317-56660336 Msa0337020:five_prime_UTR 40.0%
! TCTGATTTTCTCAGCTGCTT+TGG + chr2_4:56660586-56660605 Msa0337020:five_prime_UTR 40.0%
CCTCACAACAGTATCCAATT+AGG - chr2_4:56660682-56660701 None:intergenic 40.0%
CCTAATTGGATACTGTTGTG+AGG + chr2_4:56660679-56660698 Msa0337020:five_prime_UTR 40.0%
AATTGGATACTGTTGTGAGG+AGG + chr2_4:56660682-56660701 Msa0337020:five_prime_UTR 40.0%
GTGTATGAGTACATGACAAG+AGG + chr2_4:56660719-56660738 Msa0337020:five_prime_UTR 40.0%
GATACTCTGCTACATTACCA+TGG + chr2_4:56660870-56660889 Msa0337020:five_prime_UTR 40.0%
AATTGCATTAGGTGCAGCTA+AGG + chr2_4:56660907-56660926 Msa0337020:five_prime_UTR 40.0%
ATTGCATTAGGTGCAGCTAA+GGG + chr2_4:56660908-56660927 Msa0337020:five_prime_UTR 40.0%
TCAACAGGTATGACCCAATT+TGG + chr2_4:56660990-56661009 Msa0337020:intron 40.0%
! CGTGTTTGTTGAAACGTTAG+AGG + chr2_4:56661095-56661114 Msa0337020:intron 40.0%
TGCTTTGCCAATCTTCATCT+AGG + chr2_4:56661251-56661270 Msa0337020:intron 40.0%
GCTTTGCCAATCTTCATCTA+GGG + chr2_4:56661252-56661271 Msa0337020:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr2_4:56661451-56661470 Msa0337020:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr2_4:56661452-56661471 Msa0337020:intron 40.0%
CAGGGTGATATGATCAAAGA+TGG + chr2_4:56661627-56661646 Msa0337020:intron 40.0%
TCTGTTGCTCTTTCTTAGCA+TGG + chr2_4:56662129-56662148 Msa0337020:intron 40.0%
! CTCTTTGCTAGTTTAAGCCT+TGG - chr2_4:56662459-56662478 None:intergenic 40.0%
CAAGGCTTAAACTAGCAAAG+AGG + chr2_4:56662457-56662476 Msa0337020:five_prime_UTR 40.0%
TGACTAACCAAGGGATAAAC+TGG - chr2_4:56662626-56662645 None:intergenic 40.0%
GAACAAAGTATAGGCAGAGA+AGG - chr2_4:56662868-56662887 None:intergenic 40.0%
!! TTGCAGAGTGTTGCAAAGAT+GGG + chr2_4:56663092-56663111 Msa0337020:intron 40.0%
TAACTCAAATGACCCAATGC+AGG + chr2_4:56663208-56663227 Msa0337020:intron 40.0%
AACTCAAATGACCCAATGCA+GGG + chr2_4:56663209-56663228 Msa0337020:intron 40.0%
CAATCTCTGCATGGATTTCA+TGG - chr2_4:56663335-56663354 None:intergenic 40.0%
TGGCGATGAATCAAGTTCAT+CGG + chr2_4:56663374-56663393 Msa0337020:CDS 40.0%
! GTGCATCTATGCATGGATTA+AGG + chr2_4:56663492-56663511 Msa0337020:CDS 40.0%
!! CTAGATTTTGGAAATCGGCT+AGG - chr2_4:56663575-56663594 None:intergenic 40.0%
TTCCAAAATCTAGACCATGG+GGG + chr2_4:56663582-56663601 Msa0337020:three_prime_UTR 40.0%
!! CTGTGCATTTGCTTTGTTTC+AGG + chr2_4:56663708-56663727 Msa0337020:intron 40.0%
!! GCATTTGCTTTGTTTCAGGA+AGG + chr2_4:56663712-56663731 Msa0337020:intron 40.0%
AAACCCTATCCAAAAGGACT+GGG - chr2_4:56663838-56663857 None:intergenic 40.0%
CATGTTGCTCATATGGTGAA+TGG + chr2_4:56664310-56664329 Msa0337020:intron 40.0%
!! ACTGAAAGCATTTCAGAAGG+GGG + chr2_4:56664378-56664397 Msa0337020:intron 40.0%
! GGAGCACCAAAAATACTTGA+CGG + chr2_4:56664546-56664565 Msa0337020:three_prime_UTR 40.0%
GAGCACCAAAAATACTTGAC+GGG + chr2_4:56664547-56664566 Msa0337020:three_prime_UTR 40.0%
AGCACCAAAAATACTTGACG+GGG + chr2_4:56664548-56664567 Msa0337020:three_prime_UTR 40.0%
! ATGTCCCCGTCAAGTATTTT+TGG - chr2_4:56664555-56664574 None:intergenic 40.0%
! GGACATGTTGACACAGTTTT+TGG + chr2_4:56664569-56664588 Msa0337020:three_prime_UTR 40.0%
ACAGAAAATTGTGGTAGGAG+TGG - chr2_4:56664666-56664685 None:intergenic 40.0%
GGTTGACAGAAAATTGTGGT+AGG - chr2_4:56664671-56664690 None:intergenic 40.0%
GTTCAAGAAGCTGAACAACT+TGG - chr2_4:56664692-56664711 None:intergenic 40.0%
AGTTGTTCAGCTTCTTGAAC+GGG + chr2_4:56664692-56664711 Msa0337020:three_prime_UTR 40.0%
! TTTTGTTACAAGCCACCCTT+TGG + chr2_4:56664801-56664820 Msa0337020:intron 40.0%
!! AGGGAGTCTGATTTGTTGTG+GGG - chr2_4:56658069-56658088 None:intergenic 45.0%
!! GAGGGAGTCTGATTTGTTGT+GGG - chr2_4:56658070-56658089 None:intergenic 45.0%
AAAGGGACGACAATGAGAGA+GGG - chr2_4:56658093-56658112 None:intergenic 45.0%
ACCCAAACCACCTCTATCAT+AGG - chr2_4:56658730-56658749 None:intergenic 45.0%
! TATGATAGAGGTGGTTTGGG+TGG + chr2_4:56658729-56658748 Msa0337020:five_prime_UTR 45.0%
! CTTCTGCTTGCTAGAGACAA+GGG + chr2_4:56658959-56658978 Msa0337020:five_prime_UTR 45.0%
! TTCTGCTTGCTAGAGACAAG+GGG + chr2_4:56658960-56658979 Msa0337020:five_prime_UTR 45.0%
TACCATCCAGATGAGTGCAA+AGG + chr2_4:56659377-56659396 Msa0337020:five_prime_UTR 45.0%
TTCCTTTGCACTCATCTGGA+TGG - chr2_4:56659382-56659401 None:intergenic 45.0%
TCTCTTCCTTTGCACTCATC+TGG - chr2_4:56659386-56659405 None:intergenic 45.0%
GAGTGCAAAGGAAGAGATTG+TGG + chr2_4:56659389-56659408 Msa0337020:five_prime_UTR 45.0%
GTGCAAAGGAAGAGATTGTG+GGG + chr2_4:56659391-56659410 Msa0337020:five_prime_UTR 45.0%
TGATTGGACTGTCAGATGAG+TGG + chr2_4:56660288-56660307 Msa0337020:intron 45.0%
TGTCAGATGAGTGGTGATTC+TGG + chr2_4:56660297-56660316 Msa0337020:intron 45.0%
GGCTCTGCTTAACAATCAAC+AGG + chr2_4:56660975-56660994 Msa0337020:five_prime_UTR 45.0%
CTTCTCGTATACGTTCGTAC+AGG - chr2_4:56661150-56661169 None:intergenic 45.0%
GTCATGTGACTGTAAGGTCA+CGG + chr2_4:56661412-56661431 Msa0337020:intron 45.0%
TCATGTGACTGTAAGGTCAC+GGG + chr2_4:56661413-56661432 Msa0337020:intron 45.0%
! TACACAAGAGGCTGTTTCCA+AGG - chr2_4:56661446-56661465 None:intergenic 45.0%
CGTACAATACACCCAATGGT+GGG + chr2_4:56661483-56661502 Msa0337020:intron 45.0%
GAAAGTCAGGAGCTGTACTT+AGG - chr2_4:56661735-56661754 None:intergenic 45.0%
TCAAACCTTGCAGTCAGATG+TGG + chr2_4:56661763-56661782 Msa0337020:intron 45.0%
CAACAGGACATGAGAGAGTA+AGG - chr2_4:56662101-56662120 None:intergenic 45.0%
! TGTGCAGGTTGAGATTGTGA+TGG + chr2_4:56662334-56662353 Msa0337020:intron 45.0%
! GTGCAGGTTGAGATTGTGAT+GGG + chr2_4:56662335-56662354 Msa0337020:intron 45.0%
! TGAGATTGTGATGGGACTTG+AGG + chr2_4:56662343-56662362 Msa0337020:five_prime_UTR 45.0%
ATGGGACTTGAGGTGGAATT+TGG + chr2_4:56662353-56662372 Msa0337020:five_prime_UTR 45.0%
GGTGGAATTTGGCATTAGTG+TGG + chr2_4:56662364-56662383 Msa0337020:five_prime_UTR 45.0%
CATGTCAGCAGCTTCTTGAA+CGG - chr2_4:56662417-56662436 None:intergenic 45.0%
TGACAAGCTTCTTGAGACCA+AGG + chr2_4:56662439-56662458 Msa0337020:five_prime_UTR 45.0%
GGCTTAAACTAGCAAAGAGG+AGG + chr2_4:56662460-56662479 Msa0337020:five_prime_UTR 45.0%
AGGAGGCCTTACATGTCAAA+AGG + chr2_4:56662477-56662496 Msa0337020:exon 45.0%
GGAGGCCTTACATGTCAAAA+GGG + chr2_4:56662478-56662497 Msa0337020:exon 45.0%
!! CTGGAACGGGAAATTTTGAC+TGG + chr2_4:56662515-56662534 Msa0337020:intron 45.0%
! ACACACACAACACACGCTTT+TGG - chr2_4:56662551-56662570 None:intergenic 45.0%
ACCTACTCCAGTTTATCCCT+TGG + chr2_4:56662616-56662635 Msa0337020:intron 45.0%
ACCAAGGGATAAACTGGAGT+AGG - chr2_4:56662620-56662639 None:intergenic 45.0%
GGTTAGCAACATAATGCACG+TGG + chr2_4:56662925-56662944 Msa0337020:intron 45.0%
!! CTTGCAGAGTGTTGCAAAGA+TGG + chr2_4:56663091-56663110 Msa0337020:intron 45.0%
TATGTCATGCACAGCGAACA+TGG + chr2_4:56663120-56663139 Msa0337020:CDS 45.0%
CAAAATCAGAGCCCTGCATT+GGG - chr2_4:56663223-56663242 None:intergenic 45.0%
ACAAAATCAGAGCCCTGCAT+TGG - chr2_4:56663224-56663243 None:intergenic 45.0%
! CTGATTTTGTATGTTGCCGC+TGG + chr2_4:56663234-56663253 Msa0337020:CDS 45.0%
! TGGTGCACTACAAGAAGCAT+TGG + chr2_4:56663254-56663273 Msa0337020:CDS 45.0%
CATGGATTTCATGGCATGCA+AGG - chr2_4:56663326-56663345 None:intergenic 45.0%
GGTCAGAAACAATCTCTGCA+TGG - chr2_4:56663344-56663363 None:intergenic 45.0%
!! TGCAGAGATTGTTTCTGACC+TGG + chr2_4:56663344-56663363 Msa0337020:CDS 45.0%
!! GCAGAGATTGTTTCTGACCT+GGG + chr2_4:56663345-56663364 Msa0337020:CDS 45.0%
GTTTCTGACCTGGGTATTAC+TGG + chr2_4:56663354-56663373 Msa0337020:CDS 45.0%
ATTCATCGCCAGTAATACCC+AGG - chr2_4:56663365-56663384 None:intergenic 45.0%
! GGATAATACCCCAGTCCTTT+TGG + chr2_4:56663826-56663845 Msa0337020:intron 45.0%
! ATACCCCAGTCCTTTTGGAT+AGG + chr2_4:56663831-56663850 Msa0337020:intron 45.0%
! TACCCCAGTCCTTTTGGATA+GGG + chr2_4:56663832-56663851 Msa0337020:intron 45.0%
AACCCTATCCAAAAGGACTG+GGG - chr2_4:56663837-56663856 None:intergenic 45.0%
CAAACCCTATCCAAAAGGAC+TGG - chr2_4:56663839-56663858 None:intergenic 45.0%
GAACAGGTGCAGTCAAATGA+TGG - chr2_4:56663947-56663966 None:intergenic 45.0%
CATTTGACTGCACCTGTTCT+TGG + chr2_4:56663948-56663967 Msa0337020:three_prime_UTR 45.0%
!! GTCTTTGGAACCACTTGATG+CGG + chr2_4:56664623-56664642 Msa0337020:three_prime_UTR 45.0%
!!! GTTGCTTTTACCGCATCAAG+TGG - chr2_4:56664636-56664655 None:intergenic 45.0%
TAAAAGACACCACCAAAGGG+TGG - chr2_4:56664816-56664835 None:intergenic 45.0%
!! TCAAATTAATTAAAAAAAAA+AGG + chr2_4:56661301-56661320 Msa0337020:intron 5.0%
! AGTACCGGAGAAGAATTCGC+CGG + chr2_4:56658028-56658047 Msa0337020:five_prime_UTR 50.0%
!! GGAGGGAGTCTGATTTGTTG+TGG - chr2_4:56658071-56658090 None:intergenic 50.0%
AAGGGACGACAATGAGAGAG+GGG - chr2_4:56658092-56658111 None:intergenic 50.0%
GAAAGGGACGACAATGAGAG+AGG - chr2_4:56658094-56658113 None:intergenic 50.0%
TGGATCGATCAACAGGGAAG+AGG - chr2_4:56658240-56658259 None:intergenic 50.0%
! GCTTCTGCTTGCTAGAGACA+AGG + chr2_4:56658958-56658977 Msa0337020:five_prime_UTR 50.0%
ATTAGGCTAAGTAGCGCTGC+CGG + chr2_4:56659053-56659072 Msa0337020:intron 50.0%
GTACATGACAAGAGGGAGCT+TGG + chr2_4:56660727-56660746 Msa0337020:five_prime_UTR 50.0%
GCTGCGTACAATACACCCAA+TGG + chr2_4:56661479-56661498 Msa0337020:intron 50.0%
GCGTACAATACACCCAATGG+TGG + chr2_4:56661482-56661501 Msa0337020:intron 50.0%
GTCAGGAGCTGTACTTAGGA+AGG - chr2_4:56661731-56661750 None:intergenic 50.0%
ACCTTGCAGTCAGATGTGGA+TGG + chr2_4:56661767-56661786 Msa0337020:intron 50.0%
TCCATCCACATCTGACTGCA+AGG - chr2_4:56661771-56661790 None:intergenic 50.0%
TTGCAGTCAGATGTGGATGG+AGG + chr2_4:56661770-56661789 Msa0337020:intron 50.0%
! GATTGTGATGGGACTTGAGG+TGG + chr2_4:56662346-56662365 Msa0337020:five_prime_UTR 50.0%
!! TTGAACGGTGGTGATGGTCT+GGG - chr2_4:56662402-56662421 None:intergenic 50.0%
AGCTTCTTGAACGGTGGTGA+TGG - chr2_4:56662408-56662427 None:intergenic 50.0%
!! AGAGTGTTGCAAAGATGGGC+TGG + chr2_4:56663096-56663115 Msa0337020:intron 50.0%
TGCACAGCGAACATGGTATC+TGG + chr2_4:56663127-56663146 Msa0337020:CDS 50.0%
ACAGCGAACATGGTATCTGG+AGG + chr2_4:56663130-56663149 Msa0337020:CDS 50.0%
TGCTTCTTGTAGTGCACCAG+CGG - chr2_4:56663253-56663272 None:intergenic 50.0%
! CACCCCCATGGTCTAGATTT+TGG - chr2_4:56663587-56663606 None:intergenic 50.0%
AAATCTAGACCATGGGGGTG+AGG + chr2_4:56663587-56663606 Msa0337020:three_prime_UTR 50.0%
AATCTAGACCATGGGGGTGA+GGG + chr2_4:56663588-56663607 Msa0337020:three_prime_UTR 50.0%
GAGGGAGGTAAAGAGCTCAA+CGG + chr2_4:56663606-56663625 Msa0337020:intron 50.0%
TGAGCTCTTAGAAGCTGTGC+AGG + chr2_4:56663908-56663927 Msa0337020:three_prime_UTR 50.0%
!! GAAAGCATTTCAGAAGGGGG+AGG + chr2_4:56664381-56664400 Msa0337020:intron 50.0%
TGCTTCCCACATCCAGATGT+TGG - chr2_4:56664762-56664781 None:intergenic 50.0%
TGTTACAAGCCACCCTTTGG+TGG + chr2_4:56664804-56664823 Msa0337020:intron 50.0%
GACGACAATGAGAGAGGGGA+GGG - chr2_4:56658088-56658107 None:intergenic 55.0%
! TAGAGGTGGTTTGGGTGGCT+TGG + chr2_4:56658734-56658753 Msa0337020:five_prime_UTR 55.0%
ACTGTTGTGAGGAGGAGCAG+AGG + chr2_4:56660690-56660709 Msa0337020:five_prime_UTR 55.0%
! TGAGGAGGAGCAGAGGCTTT+TGG + chr2_4:56660697-56660716 Msa0337020:five_prime_UTR 55.0%
TGTGAGAGCTGCAGTTGCTG+AGG - chr2_4:56660952-56660971 None:intergenic 55.0%
AGGTCACGGGTTCAAGTCCT+TGG + chr2_4:56661426-56661445 Msa0337020:intron 55.0%
GGGCACTTCACTCCCTGTTA+AGG + chr2_4:56661677-56661696 Msa0337020:five_prime_UTR 55.0%
!! CTTGAACGGTGGTGATGGTC+TGG - chr2_4:56662403-56662422 None:intergenic 55.0%
GTCAGCAGCTTCTTGAACGG+TGG - chr2_4:56662414-56662433 None:intergenic 55.0%
!! AGCATTGGCAGCTCTTCGTG+AGG + chr2_4:56663269-56663288 Msa0337020:CDS 55.0%
ATTTCAGAAGGGGGAGGCCA+TGG + chr2_4:56664387-56664406 Msa0337020:intron 55.0%
! AGTGCCGGAGAAGAAGTCGC+CGG + chr2_4:56657994-56658013 Msa0337020:five_prime_UTR 60.0%
ACCGGAGAAGAATTCGCCGG+CGG + chr2_4:56658031-56658050 Msa0337020:five_prime_UTR 60.0%
ACCGCCGGCGAATTCTTCTC+CGG - chr2_4:56658035-56658054 None:intergenic 60.0%
GAGAAGAATTCGCCGGCGGT+GGG + chr2_4:56658035-56658054 Msa0337020:five_prime_UTR 60.0%
GGACGACAATGAGAGAGGGG+AGG - chr2_4:56658089-56658108 None:intergenic 60.0%
GCAACTGCAGCTCTCACAGC+AGG + chr2_4:56660954-56660973 Msa0337020:five_prime_UTR 60.0%
TGATACGCAGGGTCCGGGAA+GGG - chr2_4:56661511-56661530 None:intergenic 60.0%
! TGCACTGATACGCAGGGTCC+GGG - chr2_4:56661516-56661535 None:intergenic 60.0%
! GTGCACTGATACGCAGGGTC+CGG - chr2_4:56661517-56661536 None:intergenic 60.0%
GACCCTGCGTATCAGTGCAC+CGG + chr2_4:56661517-56661536 Msa0337020:intron 60.0%
ACCCTGCGTATCAGTGCACC+GGG + chr2_4:56661518-56661537 Msa0337020:intron 60.0%
! ACCCGGTGCACTGATACGCA+GGG - chr2_4:56661522-56661541 None:intergenic 60.0%
! AACCCGGTGCACTGATACGC+AGG - chr2_4:56661523-56661542 None:intergenic 60.0%
CTTTACCTCCCTCACCCCCA+TGG - chr2_4:56663599-56663618 None:intergenic 60.0%
GGTCGAGGGAGAGAGAGGGA+GGG + chr2_4:56657968-56657987 Msa0337020:five_prime_UTR 65.0%
! AGAGAGGGAGGGAGGAGTGC+CGG + chr2_4:56657979-56657998 Msa0337020:five_prime_UTR 65.0%
ACCGCCGGCGACTTCTTCTC+CGG - chr2_4:56658001-56658020 None:intergenic 65.0%
GAGAAGAAGTCGCCGGCGGT+GGG + chr2_4:56658001-56658020 Msa0337020:five_prime_UTR 65.0%
GGAGAAGAATTCGCCGGCGG+TGG + chr2_4:56658034-56658053 Msa0337020:five_prime_UTR 65.0%
GAATTCGCCGGCGGTGGGAT+TGG + chr2_4:56658040-56658059 Msa0337020:five_prime_UTR 65.0%
GGGGAATCCAATCCCACCGC+CGG - chr2_4:56658050-56658069 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+GGG - chr2_4:56661497-56661516 None:intergenic 65.0%
! CCAATGGTGGGACCCCTTCC+CGG + chr2_4:56661495-56661514 Msa0337020:intron 65.0%
GATACGCAGGGTCCGGGAAG+GGG - chr2_4:56661510-56661529 None:intergenic 65.0%
CTGATACGCAGGGTCCGGGA+AGG - chr2_4:56661512-56661531 None:intergenic 65.0%
CTAGACCATGGGGGTGAGGG+AGG + chr2_4:56663591-56663610 Msa0337020:three_prime_UTR 65.0%
GGGTCGAGGGAGAGAGAGGG+AGG + chr2_4:56657967-56657986 Msa0337020:five_prime_UTR 70.0%
CGAGGGAGAGAGAGGGAGGG+AGG + chr2_4:56657971-56657990 Msa0337020:five_prime_UTR 70.0%
GCCGGAGAAGAAGTCGCCGG+CGG + chr2_4:56657997-56658016 Msa0337020:five_prime_UTR 70.0%
GGAGAAGAAGTCGCCGGCGG+TGG + chr2_4:56658000-56658019 Msa0337020:five_prime_UTR 70.0%
AAGAAGTCGCCGGCGGTGGG+AGG + chr2_4:56658004-56658023 Msa0337020:five_prime_UTR 70.0%
AGAAGTCGCCGGCGGTGGGA+GGG + chr2_4:56658005-56658024 Msa0337020:five_prime_UTR 70.0%
CCGGGAAGGGGTCCCACCAT+TGG - chr2_4:56661498-56661517 None:intergenic 70.0%
CCGGTACTCCCTCCCACCGC+CGG - chr2_4:56658016-56658035 None:intergenic 75.0%
! CCGGCGGTGGGAGGGAGTAC+CGG + chr2_4:56658013-56658032 Msa0337020:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 56657965 56665133 56657965 ID=Msa0337020;Name=Msa0337020
chr2_4 mRNA 56657965 56665133 56657965 ID=Msa0337020-mRNA-1;Parent=Msa0337020;Name=Msa0337020-mRNA-1;_AED=0.10;_eAED=0.10;_QI=1393|1|1|1|0.21|0.33|15|505|115
chr2_4 exon 56657965 56658206 56657965 ID=Msa0337020-mRNA-1:exon:17273;Parent=Msa0337020-mRNA-1
chr2_4 exon 56658713 56658776 56658713 ID=Msa0337020-mRNA-1:exon:17274;Parent=Msa0337020-mRNA-1
chr2_4 exon 56658864 56659012 56658864 ID=Msa0337020-mRNA-1:exon:17275;Parent=Msa0337020-mRNA-1
chr2_4 exon 56659377 56659445 56659377 ID=Msa0337020-mRNA-1:exon:17276;Parent=Msa0337020-mRNA-1
chr2_4 exon 56660076 56660119 56660076 ID=Msa0337020-mRNA-1:exon:17277;Parent=Msa0337020-mRNA-1
chr2_4 exon 56660303 56660767 56660303 ID=Msa0337020-mRNA-1:exon:17278;Parent=Msa0337020-mRNA-1
chr2_4 exon 56660870 56660996 56660870 ID=Msa0337020-mRNA-1:exon:17279;Parent=Msa0337020-mRNA-1
chr2_4 exon 56661630 56661698 56661630 ID=Msa0337020-mRNA-1:exon:17280;Parent=Msa0337020-mRNA-1
chr2_4 exon 56661776 56661791 56661776 ID=Msa0337020-mRNA-1:exon:17281;Parent=Msa0337020-mRNA-1
chr2_4 exon 56662341 56662499 56662341 ID=Msa0337020-mRNA-1:exon:17282;Parent=Msa0337020-mRNA-1
chr2_4 exon 56663098 56663151 56663098 ID=Msa0337020-mRNA-1:exon:17283;Parent=Msa0337020-mRNA-1
chr2_4 exon 56663230 56663612 56663230 ID=Msa0337020-mRNA-1:exon:17284;Parent=Msa0337020-mRNA-1
chr2_4 exon 56663899 56664007 56663899 ID=Msa0337020-mRNA-1:exon:17285;Parent=Msa0337020-mRNA-1
chr2_4 exon 56664540 56664795 56664540 ID=Msa0337020-mRNA-1:exon:17286;Parent=Msa0337020-mRNA-1
chr2_4 exon 56665094 56665133 56665094 ID=Msa0337020-mRNA-1:exon:17287;Parent=Msa0337020-mRNA-1
chr2_4 five_prime_UTR 56657965 56658206 56657965 ID=Msa0337020-mRNA-1:five_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 five_prime_UTR 56658713 56658776 56658713 ID=Msa0337020-mRNA-1:five_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 five_prime_UTR 56658864 56659012 56658864 ID=Msa0337020-mRNA-1:five_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 five_prime_UTR 56659377 56659445 56659377 ID=Msa0337020-mRNA-1:five_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 five_prime_UTR 56660076 56660119 56660076 ID=Msa0337020-mRNA-1:five_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 five_prime_UTR 56660303 56660767 56660303 ID=Msa0337020-mRNA-1:five_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 five_prime_UTR 56660870 56660996 56660870 ID=Msa0337020-mRNA-1:five_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 five_prime_UTR 56661630 56661698 56661630 ID=Msa0337020-mRNA-1:five_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 five_prime_UTR 56661776 56661791 56661776 ID=Msa0337020-mRNA-1:five_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 five_prime_UTR 56662341 56662488 56662341 ID=Msa0337020-mRNA-1:five_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 CDS 56662489 56662499 56662489 ID=Msa0337020-mRNA-1:cds;Parent=Msa0337020-mRNA-1
chr2_4 CDS 56663098 56663151 56663098 ID=Msa0337020-mRNA-1:cds;Parent=Msa0337020-mRNA-1
chr2_4 CDS 56663230 56663512 56663230 ID=Msa0337020-mRNA-1:cds;Parent=Msa0337020-mRNA-1
chr2_4 three_prime_UTR 56663513 56663612 56663513 ID=Msa0337020-mRNA-1:three_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 three_prime_UTR 56663899 56664007 56663899 ID=Msa0337020-mRNA-1:three_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 three_prime_UTR 56664540 56664795 56664540 ID=Msa0337020-mRNA-1:three_prime_utr;Parent=Msa0337020-mRNA-1
chr2_4 three_prime_UTR 56665094 56665133 56665094 ID=Msa0337020-mRNA-1:three_prime_utr;Parent=Msa0337020-mRNA-1
Gene Sequence

>Msa0337020

ATGTCAAAAGGAGTGTTGCAAAGATGGGCTGGATATGTCATGCACAGCGAACATGGTATCTGGAGGGCTCTGATTTTGTATGTTGCCGCTGGTGCACTACAAGAAGCATTGGCAGCTCTTCGTGAGGCTCAGCTACCCGATACAGCTGCAATGTTTATCCTTGCATGCCATGAAATCCATGCAGAGATTGTTTCTGACCTGGGTATTACTGGCGATGAATCAAGTTCATCGGTTAATGATAGGATACTAAACTTGCATGCTTTACATCCTGAAAATGAAGATGTAGTTGCTGTTGATGAATACTTTGGGCAATACCAAAGAAAATTGGTGCATCTATGCATGGATTAA
Protein sequence

>Msa0337020

MSKGVLQRWAGYVMHSEHGIWRALILYVAAGALQEALAALREAQLPDTAAMFILACHEIHAEIVSDLGITGDESSSSVNDRILNLHALHPENEDVVAVDEYFGQYQRKLVHLCMD*