Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416870 | XP_003609372.2 | 92.793 | 111 | 8 | 0 | 5 | 115 | 1219 | 1329 | 1.38e-63 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416870 | G7JE61 | 92.793 | 111 | 8 | 0 | 5 | 115 | 1219 | 1329 | 6.61e-64 | 219 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0416870 | Msa0479170 | 0.800869 | 1.177239e-48 | -8.615850e-47 |
| Msa0416870 | Msa0687020 | 0.806297 | 8.809374e-50 | -8.615850e-47 |
| Msa0416870 | Msa1204530 | 0.800492 | 1.405441e-48 | -8.615850e-47 |
| Msa0416870 | Msa1284770 | 0.919432 | 4.537970e-87 | -8.615850e-47 |
| Msa0416870 | Msa1460050 | 0.800146 | 1.652693e-48 | -8.615850e-47 |
| Msa0309770 | Msa0416870 | 0.807653 | 4.550802e-50 | -8.615850e-47 |
| Msa0318010 | Msa0416870 | 0.862386 | 5.258859e-64 | -8.615850e-47 |
| Msa0337020 | Msa0416870 | 0.821851 | 3.241274e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416870 | MtrunA17_Chr4g0064061 | 92.793 | 111 | 8 | 0 | 5 | 115 | 1218 | 1328 | 1.31e-67 | 219 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416870 | AT3G33530.4 | 63.158 | 114 | 39 | 1 | 5 | 115 | 1200 | 1313 | 8.59e-44 | 152 |
| Msa0416870 | AT3G33530.1 | 63.158 | 114 | 39 | 1 | 5 | 115 | 1226 | 1339 | 8.60e-44 | 152 |
| Msa0416870 | AT3G33530.3 | 63.158 | 114 | 39 | 1 | 5 | 115 | 1257 | 1370 | 9.12e-44 | 152 |
| Msa0416870 | AT3G33530.2 | 63.158 | 114 | 39 | 1 | 5 | 115 | 1239 | 1352 | 1.09e-43 | 152 |
| Msa0416870 | AT2G26610.1 | 47.748 | 111 | 36 | 1 | 5 | 115 | 1155 | 1243 | 6.98e-28 | 106 |
Find 170 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCCCATGGTCTAGATTT+TGG | 0.143367 | 3_2:+63909797 | None:intergenic |
| GGACATGTTGACACAGTTTC+TGG | 0.154580 | 3_2:-63908813 | Msa0416870:three_prime_UTR |
| GTAATAGTAATTGTGTTTAA+TGG | 0.175644 | 3_2:-63908441 | Msa0416870:three_prime_UTR |
| CATTTGACTGCACCTGTTCT+TGG | 0.197212 | 3_2:-63909434 | Msa0416870:three_prime_UTR |
| TGGATTTCTGACTATGTTAT+TGG | 0.210635 | 3_2:-63914631 | Msa0416870:five_prime_UTR |
| GTTCTTCATTGTTGCCTAAT+TGG | 0.215523 | 3_2:-63912717 | Msa0416870:five_prime_UTR |
| TTGATAATTGAAATGTAAAT+TGG | 0.216239 | 3_2:-63912836 | Msa0416870:five_prime_UTR |
| ATGAAGAGTTATGTGTTTAA+TGG | 0.217086 | 3_2:-63908475 | Msa0416870:three_prime_UTR |
| GCAAAATAACATCTTGTCTT+TGG | 0.235427 | 3_2:-63908774 | Msa0416870:three_prime_UTR |
| GGGTCGAGGGAGAGAGAGGG+AGG | 0.253470 | 3_2:-63915418 | Msa0416870:five_prime_UTR |
| TGTTGATTGTCTTAAAATTA+TGG | 0.256283 | 3_2:-63909837 | Msa0416870:three_prime_UTR |
| AATTGCAAGATCACCTTAAC+AGG | 0.263546 | 3_2:+63911691 | None:intergenic |
| ATTGAAACACTTGACCTTCA+TGG | 0.265501 | 3_2:+63912944 | None:intergenic |
| ATGGGACTTGAGGTGGAATT+TGG | 0.271420 | 3_2:-63911028 | Msa0416870:five_prime_UTR |
| CTTGAACGGTGGTGATGGTC+TGG | 0.289548 | 3_2:+63910981 | None:intergenic |
| GTTTCTGACTTGGGTATTAC+TGG | 0.297037 | 3_2:-63910027 | Msa0416870:CDS |
| ATTAAACACATAACTCTTCA+TGG | 0.300625 | 3_2:+63908477 | None:intergenic |
| ATATTCTACTATTGATGATT+TGG | 0.300863 | 3_2:-63914394 | Msa0416870:intron |
| GTGCATCTATGCATGGATTA+AGG | 0.302472 | 3_2:-63909889 | Msa0416870:exon |
| CGAGGGAGAGAGAGGGAGGG+AGG | 0.305014 | 3_2:-63915414 | Msa0416870:five_prime_UTR |
| CTCCAAAGCACTCAACTAAA+AGG | 0.311692 | 3_2:+63915203 | None:intergenic |
| TGGGCAATACCAAAGAAAAT+TGG | 0.311834 | 3_2:-63909911 | Msa0416870:CDS |
| TTTGAAGTTTGTAGGATTGA+TGG | 0.325667 | 3_2:-63913320 | Msa0416870:intron |
| CAATCTCTGCATGGATTTCA+TGG | 0.325887 | 3_2:+63910049 | None:intergenic |
| TTGCATGTTGATAATCTTGT+TGG | 0.328883 | 3_2:+63915235 | None:intergenic |
| TGAGGAGGAGCAGAGGCTTT+TGG | 0.329273 | 3_2:-63912685 | Msa0416870:five_prime_UTR |
| TTGATAGTTTCATGTCAAAT+TGG | 0.329635 | 3_2:+63908510 | None:intergenic |
| CTCTTTGCTAGTTTAAGCCT+TGG | 0.348527 | 3_2:+63910925 | None:intergenic |
| GGATTTCTGACTATGTTATT+GGG | 0.350131 | 3_2:-63914630 | Msa0416870:intron |
| TAGAGGTGGTTTGGGTGGCT+TGG | 0.367131 | 3_2:-63914651 | Msa0416870:five_prime_UTR |
| ATCAAAGATGGACAAGTTAT+AGG | 0.369619 | 3_2:-63911742 | Msa0416870:five_prime_UTR |
| GTTGATAATCTTGTTGGAAA+AGG | 0.372256 | 3_2:+63915241 | None:intergenic |
| TGTCAGATGAGTGGTGATTC+TGG | 0.373206 | 3_2:-63913085 | Msa0416870:intron |
| AGCTAAATACATTGTAAAGC+TGG | 0.378320 | 3_2:-63914464 | Msa0416870:five_prime_UTR |
| GATTGATGGTTCAGTGAGAT+TGG | 0.381066 | 3_2:-63913306 | Msa0416870:five_prime_UTR |
| AGAGAGGGAGGGAGGAGTGC+CGG | 0.384400 | 3_2:-63915406 | Msa0416870:five_prime_UTR |
| TTCCTTTGCACTCATCTAGA+TGG | 0.392546 | 3_2:+63914006 | None:intergenic |
| TTGTTGGAAAAGGGAAGTTT+TGG | 0.392676 | 3_2:+63915251 | None:intergenic |
| GAATTCGCCGGCGGTGGGAT+TGG | 0.402273 | 3_2:-63915345 | Msa0416870:five_prime_UTR |
| TCCTATGATAGAGGTGGTTT+GGG | 0.403036 | 3_2:-63914659 | Msa0416870:five_prime_UTR |
| TATAGGTTATGTGGATCAAT+GGG | 0.403077 | 3_2:-63911725 | Msa0416870:five_prime_UTR |
| TGGTGAAGATTGTAAAAGAA+AGG | 0.410674 | 3_2:+63915271 | None:intergenic |
| CTTGCAGAGTGTTGCAAAGA+TGG | 0.412199 | 3_2:-63910290 | Msa0416870:intron |
| ATCCTATGATAGAGGTGGTT+TGG | 0.419822 | 3_2:-63914660 | Msa0416870:five_prime_UTR |
| CCTCACAACAGTATCCAATT+AGG | 0.423095 | 3_2:+63912703 | None:intergenic |
| ACTAGAATGAAAATTGCATT+AGG | 0.423344 | 3_2:-63912486 | Msa0416870:five_prime_UTR |
| TTATGATCATTTCCAAGAAC+AGG | 0.423613 | 3_2:+63909422 | None:intergenic |
| TTGATAATCTTGTTGGAAAA+GGG | 0.429487 | 3_2:+63915242 | None:intergenic |
| GGAGGGAGTCTGATTTGTTG+TGG | 0.434640 | 3_2:+63915317 | None:intergenic |
| CATTGAACTAAACACACTTC+CGG | 0.436140 | 3_2:-63908658 | Msa0416870:three_prime_UTR |
| CAAGTTCATCGGTTAATGAT+AGG | 0.437799 | 3_2:-63909996 | Msa0416870:CDS |
| AGTTGTTCAGCTTCTTGAAC+GGG | 0.438920 | 3_2:-63908690 | Msa0416870:three_prime_UTR |
| TGCACAACGAACATGGTATC+TGG | 0.442338 | 3_2:-63910254 | Msa0416870:CDS |
| TGCAGAGATTGTTTCTGACT+TGG | 0.445664 | 3_2:-63910037 | Msa0416870:CDS |
| AGGAGGCCTTACATGTCAAA+AGG | 0.450488 | 3_2:-63910904 | Msa0416870:exon |
| GGGCACTTCACTCCCTGTTA+AGG | 0.450907 | 3_2:-63911704 | Msa0416870:intron |
| GGTGAAGATTGTAAAAGAAA+GGG | 0.452170 | 3_2:+63915272 | None:intergenic |
| TTGTGGAAAAGAACAATAAC+CGG | 0.454826 | 3_2:-63913028 | Msa0416870:five_prime_UTR |
| GATAAACATTGCAGCTGTAT+CGG | 0.455296 | 3_2:+63910080 | None:intergenic |
| AAACACTGTATCTTTGCTTC+CGG | 0.457800 | 3_2:+63913009 | None:intergenic |
| GGAGAAGAAGTCGCCGGCGG+TGG | 0.459230 | 3_2:-63915385 | Msa0416870:five_prime_UTR |
| TTGCTGTTGATGAATACTTT+GGG | 0.462642 | 3_2:-63909930 | Msa0416870:CDS |
| GTTGCTGTTGATGAATACTT+TGG | 0.464781 | 3_2:-63909931 | Msa0416870:CDS |
| GGCTCTGCTTAACAATCAAC+AGG | 0.465116 | 3_2:-63912407 | Msa0416870:intron |
| GGAGAAGAATTCGCCGGCGG+TGG | 0.467459 | 3_2:-63915351 | Msa0416870:five_prime_UTR |
| ATAAACATTGCAGCTGTATC+GGG | 0.470448 | 3_2:+63910081 | None:intergenic |
| GATCCATCATATATTGCTAC+TGG | 0.472187 | 3_2:+63912874 | None:intergenic |
| AAGAATATGTTGTCTTCCTC+AGG | 0.473205 | 3_2:+63913049 | None:intergenic |
| GAGGGAGTCTGATTTGTTGT+GGG | 0.474350 | 3_2:+63915318 | None:intergenic |
| TTGAACGGTGGTGATGGTCT+GGG | 0.480172 | 3_2:+63910982 | None:intergenic |
| GCAACTGCAGCTCTCACAGC+AGG | 0.480350 | 3_2:-63912428 | Msa0416870:five_prime_UTR |
| CCGGCGGTGGGAGGGAGTAC+CGG | 0.483738 | 3_2:-63915372 | Msa0416870:five_prime_UTR |
| TTATAGGTTATGTGGATCAA+TGG | 0.483999 | 3_2:-63911726 | Msa0416870:five_prime_UTR |
| TGCTTCCCACATCCAGATGT+TGG | 0.484455 | 3_2:+63908623 | None:intergenic |
| TGAGCTCTTAGAAGCTGTGC+AGG | 0.488333 | 3_2:-63909474 | Msa0416870:three_prime_UTR |
| AGCTTCTTGAACGGTGGTGA+TGG | 0.489012 | 3_2:+63910976 | None:intergenic |
| AATTGCATTAGGTGCAGCTA+AGG | 0.490148 | 3_2:-63912475 | Msa0416870:five_prime_UTR |
| GAACTTTGATATAAAAGTGC+AGG | 0.491200 | 3_2:-63913284 | Msa0416870:intron |
| GCAGAGATTGTTTCTGACTT+GGG | 0.491632 | 3_2:-63910036 | Msa0416870:CDS |
| TGTAAAGTGCATACAAGGAT+TGG | 0.495823 | 3_2:-63914510 | Msa0416870:five_prime_UTR |
| GTACATGACAAGAGGGAGCT+TGG | 0.497616 | 3_2:-63912655 | Msa0416870:five_prime_UTR |
| ACCCAAACCACCTCTATCAT+AGG | 0.498618 | 3_2:+63914658 | None:intergenic |
| GCTAAATACATTGTAAAGCT+GGG | 0.498858 | 3_2:-63914463 | Msa0416870:five_prime_UTR |
| AAAATCTAGACCATGGGGTG+AGG | 0.514061 | 3_2:-63909795 | Msa0416870:three_prime_UTR |
| GAGTGCAAAGGAAGAGATTG+TGG | 0.517469 | 3_2:-63913996 | Msa0416870:five_prime_UTR |
| TATGATAGAGGTGGTTTGGG+TGG | 0.518870 | 3_2:-63914656 | Msa0416870:five_prime_UTR |
| GAACAGGTGCAGTCAAATGA+TGG | 0.520727 | 3_2:+63909438 | None:intergenic |
| ACCGCCGGCGACTTCTTCTC+CGG | 0.520831 | 3_2:+63915387 | None:intergenic |
| CAGGGTGATATGATCAAAGA+TGG | 0.524043 | 3_2:-63911754 | Msa0416870:five_prime_UTR |
| AAGAAGTCGCCGGCGGTGGG+AGG | 0.528234 | 3_2:-63915381 | Msa0416870:five_prime_UTR |
| GGTCGAGGGAGAGAGAGGGA+GGG | 0.528471 | 3_2:-63915417 | Msa0416870:five_prime_UTR |
| TTTCCAGTAGCAATATATGA+TGG | 0.529167 | 3_2:-63912877 | Msa0416870:five_prime_UTR |
| GACGACAATGAGAGAGGGGA+GGG | 0.529277 | 3_2:+63915300 | None:intergenic |
| TGGACAAGTTATAGGTTATG+TGG | 0.534522 | 3_2:-63911734 | Msa0416870:five_prime_UTR |
| TAAAATGTAAAGTGCATACA+AGG | 0.536296 | 3_2:-63914515 | Msa0416870:five_prime_UTR |
| GTTCAAGAAGCTGAACAACT+TGG | 0.541778 | 3_2:+63908693 | None:intergenic |
| TTTAGTTGAGTGCTTTGGAG+TGG | 0.545392 | 3_2:-63915200 | Msa0416870:intron |
| GCTTCTGCTTGCTAGAGACA+AGG | 0.547384 | 3_2:-63914427 | Msa0416870:five_prime_UTR |
| GAAAGGGACGACAATGAGAG+AGG | 0.548013 | 3_2:+63915294 | None:intergenic |
| TCTTTACCTCCCTCACCCCA+TGG | 0.552988 | 3_2:+63909785 | None:intergenic |
| ATTTCCAAAATCTAGACCAT+GGG | 0.554480 | 3_2:-63909801 | Msa0416870:three_prime_UTR |
| CTTCTGCTTGCTAGAGACAA+GGG | 0.558343 | 3_2:-63914426 | Msa0416870:five_prime_UTR |
| GGAGGCCTTACATGTCAAAA+GGG | 0.560700 | 3_2:-63910903 | Msa0416870:intron |
| TGACAAGCTTCTTGAGACCA+AGG | 0.563747 | 3_2:-63910942 | Msa0416870:five_prime_UTR |
| AAGTTGTTCAGCTTCTTGAA+CGG | 0.563877 | 3_2:-63908691 | Msa0416870:three_prime_UTR |
| AGAAGTCGCCGGCGGTGGGA+GGG | 0.564843 | 3_2:-63915380 | Msa0416870:five_prime_UTR |
| AGGGAGTCTGATTTGTTGTG+GGG | 0.564914 | 3_2:+63915319 | None:intergenic |
| CCGGTACTCCCTCCCACCGC+CGG | 0.565659 | 3_2:+63915372 | None:intergenic |
| AAATCTAGACCATGGGGTGA+GGG | 0.566061 | 3_2:-63909794 | Msa0416870:three_prime_UTR |
| GTCTTTGGAACCACTTGATG+CGG | 0.568436 | 3_2:-63908759 | Msa0416870:three_prime_UTR |
| TCAAACCTTGCAGTCAGATG+TGG | 0.568833 | 3_2:-63911618 | Msa0416870:intron |
| GAGAAGAAGTCGCCGGCGGT+GGG | 0.569272 | 3_2:-63915384 | Msa0416870:five_prime_UTR |
| AGATAGTGATCCTATGATAG+AGG | 0.569613 | 3_2:-63914668 | Msa0416870:five_prime_UTR |
| ACCGCCGGCGAATTCTTCTC+CGG | 0.570939 | 3_2:+63915353 | None:intergenic |
| GAGAAGAATTCGCCGGCGGT+GGG | 0.571292 | 3_2:-63915350 | Msa0416870:five_prime_UTR |
| GATTGTGATGGGACTTGAGG+TGG | 0.571617 | 3_2:-63911035 | Msa0416870:five_prime_UTR |
| AAAATTGGTGCATCTATGCA+TGG | 0.571863 | 3_2:-63909896 | Msa0416870:CDS |
| AAAGGGACGACAATGAGAGA+GGG | 0.573809 | 3_2:+63915295 | None:intergenic |
| TGGCGATGAATCAAGTTCAT+CGG | 0.575140 | 3_2:-63910007 | Msa0416870:CDS |
| AGTGCAAAGGAAGAGATTGT+GGG | 0.575422 | 3_2:-63913995 | Msa0416870:five_prime_UTR |
| TTGCAGAGTGTTGCAAAGAT+GGG | 0.577527 | 3_2:-63910289 | Msa0416870:intron |
| CATGGATTTCATGGCATGCA+AGG | 0.578409 | 3_2:+63910058 | None:intergenic |
| TGAGATTGTGATGGGACTTG+AGG | 0.583589 | 3_2:-63911038 | Msa0416870:five_prime_UTR |
| CATGTCAGCAGCTTCTTGAA+CGG | 0.584545 | 3_2:+63910967 | None:intergenic |
| TGCTTCTTGTAGTGCACCAG+CGG | 0.588769 | 3_2:+63910131 | None:intergenic |
| GATTGTAAAAGAAAGGGAAA+GGG | 0.589326 | 3_2:+63915278 | None:intergenic |
| TATGTCATGCACAACGAACA+TGG | 0.589696 | 3_2:-63910261 | Msa0416870:CDS |
| GTCAGCAGCTTCTTGAACGG+TGG | 0.593457 | 3_2:+63910970 | None:intergenic |
| ACAGAAAATTGTGGTAGGAG+TGG | 0.595163 | 3_2:+63908719 | None:intergenic |
| AGGAAGACAACATATTCTTG+TGG | 0.600574 | 3_2:-63913045 | Msa0416870:five_prime_UTR |
| AGATTGTAAAAGAAAGGGAA+AGG | 0.601542 | 3_2:+63915277 | None:intergenic |
| TGGTGCACTACAAGAAGCAT+TGG | 0.601818 | 3_2:-63910127 | Msa0416870:CDS |
| GGGGAATCCAATCCCACCGC+CGG | 0.602871 | 3_2:+63915338 | None:intergenic |
| AGAGTGTTGCAAAGATGGGC+TGG | 0.604480 | 3_2:-63910285 | Msa0416870:CDS |
| TTCTGCTTGCTAGAGACAAG+GGG | 0.610990 | 3_2:-63914425 | Msa0416870:five_prime_UTR |
| TCTAGACCATGGGGTGAGGG+AGG | 0.611372 | 3_2:-63909791 | Msa0416870:intron |
| GGCTTAAACTAGCAAAGAGG+AGG | 0.615054 | 3_2:-63910921 | Msa0416870:five_prime_UTR |
| GTGTATGAGTACATGACAAG+AGG | 0.617548 | 3_2:-63912663 | Msa0416870:five_prime_UTR |
| GATTTCCAAAATCTAGACCA+TGG | 0.622883 | 3_2:-63909802 | Msa0416870:three_prime_UTR |
| GGTTGACAGAAAATTGTGGT+AGG | 0.623111 | 3_2:+63908714 | None:intergenic |
| GGACGACAATGAGAGAGGGG+AGG | 0.623287 | 3_2:+63915299 | None:intergenic |
| GGTGGAATTTGGCATTAGTG+TGG | 0.628201 | 3_2:-63911017 | Msa0416870:five_prime_UTR |
| GTGCAGGTTGAGATTGTGAT+GGG | 0.630018 | 3_2:-63911046 | Msa0416870:intron |
| TGTGAGAGCTGCAGTTGCTG+AGG | 0.635354 | 3_2:+63912433 | None:intergenic |
| AGCATTGGCAGCTCTTCGTG+AGG | 0.642510 | 3_2:-63910112 | Msa0416870:CDS |
| ACTGTTGTGAGGAGGAGCAG+AGG | 0.644291 | 3_2:-63912692 | Msa0416870:five_prime_UTR |
| TGTGCAGGTTGAGATTGTGA+TGG | 0.647380 | 3_2:-63911047 | Msa0416870:intron |
| AGTCAGAAACAATCTCTGCA+TGG | 0.652126 | 3_2:+63910040 | None:intergenic |
| ACTTGGTTGACAGAAAATTG+TGG | 0.654452 | 3_2:+63908710 | None:intergenic |
| AGTGCCGGAGAAGAAGTCGC+CGG | 0.654528 | 3_2:-63915391 | Msa0416870:five_prime_UTR |
| ATTGCATTAGGTGCAGCTAA+GGG | 0.656681 | 3_2:-63912474 | Msa0416870:five_prime_UTR |
| ACCTTGCAGTCAGATGTGGA+TGG | 0.659433 | 3_2:-63911614 | Msa0416870:intron |
| CAAGGCTTAAACTAGCAAAG+AGG | 0.660316 | 3_2:-63910924 | Msa0416870:five_prime_UTR |
| TAGTGATCCTATGATAGAGG+TGG | 0.661110 | 3_2:-63914665 | Msa0416870:five_prime_UTR |
| AGTACCGGAGAAGAATTCGC+CGG | 0.663293 | 3_2:-63915357 | Msa0416870:five_prime_UTR |
| TGTATGAGTACATGACAAGA+GGG | 0.666417 | 3_2:-63912662 | Msa0416870:five_prime_UTR |
| AAGGGACGACAATGAGAGAG+GGG | 0.666541 | 3_2:+63915296 | None:intergenic |
| TACCATCTAGATGAGTGCAA+AGG | 0.667396 | 3_2:-63914008 | Msa0416870:five_prime_UTR |
| TGATTGGACTGTCAGATGAG+TGG | 0.670291 | 3_2:-63913094 | Msa0416870:intron |
| GCCGGAGAAGAAGTCGCCGG+CGG | 0.671593 | 3_2:-63915388 | Msa0416870:five_prime_UTR |
| TTGCAGTCAGATGTGGATGG+AGG | 0.675350 | 3_2:-63911611 | Msa0416870:intron |
| AATTGGATACTGTTGTGAGG+AGG | 0.680705 | 3_2:-63912700 | Msa0416870:five_prime_UTR |
| GTGCAAAGGAAGAGATTGTG+GGG | 0.684414 | 3_2:-63913994 | Msa0416870:five_prime_UTR |
| CCTAATTGGATACTGTTGTG+AGG | 0.693032 | 3_2:-63912703 | Msa0416870:five_prime_UTR |
| GATACTCTGCTACATTACCA+TGG | 0.696698 | 3_2:-63912512 | Msa0416870:five_prime_UTR |
| ACCGGAGAAGAATTCGCCGG+CGG | 0.697852 | 3_2:-63915354 | Msa0416870:five_prime_UTR |
| ACAACGAACATGGTATCTGG+AGG | 0.712275 | 3_2:-63910251 | Msa0416870:intron |
| ATTGCAAGATCACCTTAACA+GGG | 0.717743 | 3_2:+63911692 | None:intergenic |
| TTTCCAAAATCTAGACCATG+GGG | 0.718996 | 3_2:-63909800 | Msa0416870:three_prime_UTR |
| ATAGGTTATGTGGATCAATG+GGG | 0.754994 | 3_2:-63911724 | Msa0416870:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGTTGTTATAATTAAT+TGG | - | chr3_2:63909937-63909956 | Msa0416870:CDS | 10.0% |
| !! | TTTAGTTGTTATAATTAATT+GGG | - | chr3_2:63909938-63909957 | Msa0416870:CDS | 10.0% |
| !! | AAATATTAATCCATTATATT+GGG | + | chr3_2:63910211-63910230 | None:intergenic | 10.0% |
| !! | AAAATATTAATCCATTATAT+TGG | + | chr3_2:63910212-63910231 | None:intergenic | 10.0% |
| !!! | ATTAATATTTTACTGAATAA+GGG | - | chr3_2:63910221-63910240 | Msa0416870:intron | 10.0% |
| !! | AAATATTAATCCATTATATT+GGG | + | chr3_2:63910211-63910230 | None:intergenic | 10.0% |
| !! | AAAATATTAATCCATTATAT+TGG | + | chr3_2:63910212-63910231 | None:intergenic | 10.0% |
| !!! | ATTAATATTTTACTGAATAA+GGG | - | chr3_2:63910221-63910240 | Msa0416870:intron | 10.0% |
| !! | ATATGTATATAATATAGTAT+TGG | + | chr3_2:63911237-63911256 | None:intergenic | 10.0% |
| !! | TATAAAATATAATAGTTGTT+GGG | + | chr3_2:63912475-63912494 | None:intergenic | 10.0% |
| !! | TCTAAATAGATATAAAAATG+TGG | - | chr3_2:63909729-63909748 | Msa0416870:intron | 15.0% |
| !!! | TTTTTAGATCCTTAAATATA+TGG | - | chr3_2:63909971-63909990 | Msa0416870:CDS | 15.0% |
| !!! | GATTAATATTTTACTGAATA+AGG | - | chr3_2:63910220-63910239 | Msa0416870:intron | 15.0% |
| !!! | GATTAATATTTTACTGAATA+AGG | - | chr3_2:63910220-63910239 | Msa0416870:intron | 15.0% |
| !!! | TTGATAATTGAAATGTAAAT+TGG | - | chr3_2:63910987-63911006 | Msa0416870:five_prime_UTR | 15.0% |
| !!! | ATATGTTTTGATCTTATTTA+AGG | - | chr3_2:63911654-63911673 | Msa0416870:intron | 15.0% |
| !! | AATTAAAAAAAAAAGGATTG+TGG | - | chr3_2:63911750-63911769 | Msa0416870:five_prime_UTR | 15.0% |
| !! | AACATTTGAAGAATAAAAAA+GGG | + | chr3_2:63911989-63912008 | None:intergenic | 15.0% |
| !! | AAACATTTGAAGAATAAAAA+AGG | + | chr3_2:63911990-63912009 | None:intergenic | 15.0% |
| !! | CTTTCATAAAAAAAATAGTA+CGG | - | chr3_2:63912304-63912323 | Msa0416870:intron | 15.0% |
| !! | TTTCATAAAAAAAATAGTAC+GGG | - | chr3_2:63912305-63912324 | Msa0416870:intron | 15.0% |
| !! | CTATAAAATATAATAGTTGT+TGG | + | chr3_2:63912476-63912495 | None:intergenic | 15.0% |
| !!! | CTATTATATTTTATAGTAGT+TGG | - | chr3_2:63912480-63912499 | Msa0416870:five_prime_UTR | 15.0% |
| !!! | TTATCTAAAATGATTCTTAA+AGG | + | chr3_2:63913167-63913186 | None:intergenic | 15.0% |
| !! | TTTAGATAATGTGTAATTAT+AGG | - | chr3_2:63913178-63913197 | Msa0416870:intron | 15.0% |
| !! | GCTTGATTAATATAAAAATA+TGG | + | chr3_2:63913332-63913351 | None:intergenic | 15.0% |
| !! | TTCAAAATTATTATGTAGAA+CGG | + | chr3_2:63913414-63913433 | None:intergenic | 15.0% |
| !!! | TTTTCGTATCAAAATATTTA+TGG | + | chr3_2:63913963-63913982 | None:intergenic | 15.0% |
| !!! | TAACTTTTTAGTTCATTTTA+TGG | - | chr3_2:63914666-63914685 | Msa0416870:five_prime_UTR | 15.0% |
| !! | ACAATGAATTCAATTAAAAA+AGG | + | chr3_2:63914890-63914909 | None:intergenic | 15.0% |
| !!! | TCTTATATGTATTTTATAGA+AGG | - | chr3_2:63914962-63914981 | Msa0416870:intron | 15.0% |
| !!! | TGTTTCATATCAAATTTGTT+TGG | - | chr3_2:63908733-63908752 | Msa0416870:three_prime_UTR | 20.0% |
| !!! | GTTTCATATCAAATTTGTTT+GGG | - | chr3_2:63908734-63908753 | Msa0416870:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTGAAATTTTGTGC+TGG | - | chr3_2:63908775-63908794 | Msa0416870:three_prime_UTR | 20.0% |
| !!! | TTTTTTTGAAATTTTGTGCT+GGG | - | chr3_2:63908776-63908795 | Msa0416870:three_prime_UTR | 20.0% |
| !!! | TTTGATTATTGAGTTTTGAT+CGG | - | chr3_2:63908800-63908819 | Msa0416870:three_prime_UTR | 20.0% |
| !!! | TTTGTTTTGTTGTTTGTTTT+TGG | - | chr3_2:63908862-63908881 | Msa0416870:intron | 20.0% |
| !!! | TTTGGATGATTTTGTATTAT+CGG | - | chr3_2:63908880-63908899 | Msa0416870:intron | 20.0% |
| !!! | TGTTGATTTGAATATGAATT+TGG | - | chr3_2:63908903-63908922 | Msa0416870:intron | 20.0% |
| !!! | TGAATATGAATTTGGTTTTA+TGG | - | chr3_2:63908911-63908930 | Msa0416870:intron | 20.0% |
| !!! | GAATATGAATTTGGTTTTAT+GGG | - | chr3_2:63908912-63908931 | Msa0416870:intron | 20.0% |
| !!! | TTGTAGCTTAAATTTTGAAT+TGG | - | chr3_2:63908984-63909003 | Msa0416870:intron | 20.0% |
| !!! | TGTAGCTTAAATTTTGAATT+GGG | - | chr3_2:63908985-63909004 | Msa0416870:intron | 20.0% |
| !! | AGATTTGATGAAGATTAAAA+TGG | - | chr3_2:63909036-63909055 | Msa0416870:intron | 20.0% |
| !! | GATTTGATGAAGATTAAAAT+GGG | - | chr3_2:63909037-63909056 | Msa0416870:intron | 20.0% |
| !! | TATCTGTAATTGTAAATTTG+TGG | - | chr3_2:63909253-63909272 | Msa0416870:intron | 20.0% |
| !!! | ATATTCTACTATTGATGATT+TGG | - | chr3_2:63909429-63909448 | Msa0416870:three_prime_UTR | 20.0% |
| !!! | ATGTTTTGATGTAAACAATT+AGG | - | chr3_2:63909474-63909493 | Msa0416870:three_prime_UTR | 20.0% |
| !!! | TTTGATTGATCTGTTTTTAT+AGG | - | chr3_2:63909690-63909709 | Msa0416870:intron | 20.0% |
| !!! | GTTTTTCTTGATGAATATTT+GGG | - | chr3_2:63909775-63909794 | Msa0416870:intron | 20.0% |
| !!! | GGATAATTTAGTGAAATTTT+AGG | + | chr3_2:63909896-63909915 | None:intergenic | 20.0% |
| !! | TAACTATGCAATGAAAATTA+AGG | + | chr3_2:63909917-63909936 | None:intergenic | 20.0% |
| !! | TATCAATGTCCATATATTTA+AGG | + | chr3_2:63909983-63910002 | None:intergenic | 20.0% |
| !!! | ATTAGAGATTTAAGATCAAT+CGG | - | chr3_2:63910002-63910021 | Msa0416870:CDS | 20.0% |
| !! | AATAGTGTATTTCAAATCAA+TGG | + | chr3_2:63910080-63910099 | None:intergenic | 20.0% |
| !!! | ACTTGAATTTTTTTAGTAAG+TGG | - | chr3_2:63910173-63910192 | Msa0416870:intron | 20.0% |
| !! | AATAGTGTATTTCAAATCAA+TGG | + | chr3_2:63910080-63910099 | None:intergenic | 20.0% |
| !!! | AGATTTGAATTTTTAGTAAG+TGG | - | chr3_2:63910434-63910453 | Msa0416870:intron | 20.0% |
| !!! | ATTGTTTCTTTATTTTGTTG+AGG | - | chr3_2:63910599-63910618 | Msa0416870:intron | 20.0% |
| !! | AATGCAAAACATTAATATCT+AGG | + | chr3_2:63910705-63910724 | None:intergenic | 20.0% |
| !! | CTATAAACACCTTAAAATAA+TGG | + | chr3_2:63911615-63911634 | None:intergenic | 20.0% |
| !!! | TTTACAATTTTAAAATCTGC+AGG | - | chr3_2:63912050-63912069 | Msa0416870:intron | 20.0% |
| !!! | TTACAATTTTAAAATCTGCA+GGG | - | chr3_2:63912051-63912070 | Msa0416870:intron | 20.0% |
| !! | CTATTTATAGACTAATTTGA+AGG | - | chr3_2:63912511-63912530 | Msa0416870:five_prime_UTR | 20.0% |
| !! | GGATCAAAATATTATCAAAA+TGG | + | chr3_2:63913092-63913111 | None:intergenic | 20.0% |
| !!! | TGATAATATTTTGATCCTTT+TGG | - | chr3_2:63913095-63913114 | Msa0416870:intron | 20.0% |
| !! | AAAAATATGGATCAAAGTAT+AGG | + | chr3_2:63913319-63913338 | None:intergenic | 20.0% |
| !! | AAAAAGGATAAATTAAACAG+TGG | + | chr3_2:63913600-63913619 | None:intergenic | 20.0% |
| !!! | TGTTGATTGTCTTAAAATTA+TGG | - | chr3_2:63913986-63914005 | Msa0416870:five_prime_UTR | 20.0% |
| !! | AATATTGAAACAGAACAATA+TGG | + | chr3_2:63914209-63914228 | None:intergenic | 20.0% |
| !! | AAAACATTGAATGTCAAATT+TGG | + | chr3_2:63914477-63914496 | None:intergenic | 20.0% |
| !! | ACAAGTTTATTATTCAATGT+TGG | - | chr3_2:63914559-63914578 | Msa0416870:intron | 20.0% |
| !! | TACACAACTGATAAAAATTT+GGG | + | chr3_2:63914617-63914636 | None:intergenic | 20.0% |
| !! | TTACACAACTGATAAAAATT+TGG | + | chr3_2:63914618-63914637 | None:intergenic | 20.0% |
| !! | ATGAACTAAAAAGTTAAAGT+AGG | + | chr3_2:63914662-63914681 | None:intergenic | 20.0% |
| !!! | ATATGTATTTTATAGAAGGT+TGG | - | chr3_2:63914966-63914985 | Msa0416870:intron | 20.0% |
| !! | GTAATAGTAATTGTGTTTAA+TGG | - | chr3_2:63915382-63915401 | Msa0416870:five_prime_UTR | 20.0% |
| !! | TTGATAATCTTGTTGGAAAA+GGG | + | chr3_2:63908584-63908603 | None:intergenic | 25.0% |
| ! | AGACATTTCTGATATGAAAA+TGG | + | chr3_2:63908698-63908717 | None:intergenic | 25.0% |
| !! | AAAATTGAGAATTGGTTTAG+CGG | - | chr3_2:63908828-63908847 | Msa0416870:three_prime_UTR | 25.0% |
| !!! | ATGGGTTTCATATGTTTTTT+TGG | - | chr3_2:63908930-63908949 | Msa0416870:intron | 25.0% |
| ! | AAACTGAAAAAGATTTGAGT+AGG | - | chr3_2:63909094-63909113 | Msa0416870:intron | 25.0% |
| ! | GTAATTGTAAATTTGTGGTA+AGG | - | chr3_2:63909258-63909277 | Msa0416870:intron | 25.0% |
| ! | TAAAATGTAAAGTGCATACA+AGG | - | chr3_2:63909308-63909327 | Msa0416870:intron | 25.0% |
| ! | TCAATAATAGACATCAACTA+TGG | + | chr3_2:63909525-63909544 | None:intergenic | 25.0% |
| !!! | ATCGTAATTGGATTTGTTTT+AGG | - | chr3_2:63909753-63909772 | Msa0416870:intron | 25.0% |
| !! | GGTTTTTCTTGATGAATATT+TGG | - | chr3_2:63909774-63909793 | Msa0416870:intron | 25.0% |
| ! | GTTCAAATGCACAATTTATT+TGG | - | chr3_2:63910123-63910142 | Msa0416870:CDS | 25.0% |
| ! | GTTCAAATGCACAATTTATT+TGG | - | chr3_2:63910123-63910142 | Msa0416870:CDS | 25.0% |
| !!! | GTACCAATGTTTCATTTTTT+TGG | - | chr3_2:63910565-63910584 | Msa0416870:intron | 25.0% |
| ! | TCACCAAAAAAATGAAACAT+TGG | + | chr3_2:63910571-63910590 | None:intergenic | 25.0% |
| ! | CTATTACTTAAACACATGTT+TGG | + | chr3_2:63910665-63910684 | None:intergenic | 25.0% |
| !! | ATGTTTTGCATTTTTGTGAT+TGG | - | chr3_2:63910713-63910732 | Msa0416870:intron | 25.0% |
| !!! | TATATTTTTGCTTCTTCAAG+AGG | + | chr3_2:63910856-63910875 | None:intergenic | 25.0% |
| ! | GCAAAAATATATATCCATGA+AGG | - | chr3_2:63910865-63910884 | Msa0416870:intron | 25.0% |
| !!! | TAATCTCTTTTTAGTGTTTC+CGG | - | chr3_2:63910907-63910926 | Msa0416870:exon | 25.0% |
| ! | AAATTGAAAAACACAAACAC+CGG | + | chr3_2:63910929-63910948 | None:intergenic | 25.0% |
| !! | TTCATAGTATCTGAACTTTT+AGG | - | chr3_2:63911054-63911073 | Msa0416870:intron | 25.0% |
| ! | CATATATTAATCATGCTGTA+AGG | - | chr3_2:63911252-63911271 | Msa0416870:intron | 25.0% |
| ! | ACTAGAATGAAAATTGCATT+AGG | - | chr3_2:63911337-63911356 | Msa0416870:intron | 25.0% |
| !!! | AAGCATAGCCATATTTTAAT+TGG | + | chr3_2:63911482-63911501 | None:intergenic | 25.0% |
| ! | GATCAAAACATATAAAGCTT+GGG | + | chr3_2:63911647-63911666 | None:intergenic | 25.0% |
| ! | AGATCAAAACATATAAAGCT+TGG | + | chr3_2:63911648-63911667 | None:intergenic | 25.0% |
| ! | TTGATGTATATATTTCCACT+AGG | - | chr3_2:63911811-63911830 | Msa0416870:intron | 25.0% |
| ! | TGATGTATATATTTCCACTA+GGG | - | chr3_2:63911812-63911831 | Msa0416870:intron | 25.0% |
| ! | TTTGAAAGAAAAAGAAAGTC+AGG | + | chr3_2:63912190-63912209 | None:intergenic | 25.0% |
| !!! | ATATTTGACTTGAGTAGTTT+GGG | - | chr3_2:63912277-63912296 | Msa0416870:intron | 25.0% |
| !! | CTTTTTCCACTCTTAATTAA+CGG | + | chr3_2:63912363-63912382 | None:intergenic | 25.0% |
| !! | TCTATTTTACATATGTATGC+AGG | + | chr3_2:63912438-63912457 | None:intergenic | 25.0% |
| ! | ATTTACATTTCAAATTGTGC+AGG | - | chr3_2:63912761-63912780 | Msa0416870:five_prime_UTR | 25.0% |
| ! | TTATTATGTAGAACGGAAAA+TGG | + | chr3_2:63913407-63913426 | None:intergenic | 25.0% |
| ! | AATGCAGATATTAATCATCT+TGG | + | chr3_2:63913445-63913464 | None:intergenic | 25.0% |
| ! | CTGCATTTATATGAATGAAA+AGG | - | chr3_2:63913458-63913477 | Msa0416870:intron | 25.0% |
| ! | ACACAACTGATAAAAATTTG+GGG | + | chr3_2:63914616-63914635 | None:intergenic | 25.0% |
| ! | ATGATAAGAAATAAAAGCCA+TGG | + | chr3_2:63914848-63914867 | None:intergenic | 25.0% |
| !! | TTGATAGTTTCATGTCAAAT+TGG | + | chr3_2:63915316-63915335 | None:intergenic | 25.0% |
| ! | ATTAAACACATAACTCTTCA+TGG | + | chr3_2:63915349-63915368 | None:intergenic | 25.0% |
| ! | ATGAAGAGTTATGTGTTTAA+TGG | - | chr3_2:63915348-63915367 | Msa0416870:five_prime_UTR | 25.0% |
| GATTGTAAAAGAAAGGGAAA+GGG | + | chr3_2:63908548-63908567 | None:intergenic | 30.0% | |
| AGATTGTAAAAGAAAGGGAA+AGG | + | chr3_2:63908549-63908568 | None:intergenic | 30.0% | |
| GGTGAAGATTGTAAAAGAAA+GGG | + | chr3_2:63908554-63908573 | None:intergenic | 30.0% | |
| TGGTGAAGATTGTAAAAGAA+AGG | + | chr3_2:63908555-63908574 | None:intergenic | 30.0% | |
| !! | GTTGATAATCTTGTTGGAAA+AGG | + | chr3_2:63908585-63908604 | None:intergenic | 30.0% |
| !! | TTGCATGTTGATAATCTTGT+TGG | + | chr3_2:63908591-63908610 | None:intergenic | 30.0% |
| AGAAATGTCTCTCTTTGAAT+CGG | - | chr3_2:63908708-63908727 | Msa0416870:three_prime_UTR | 30.0% | |
| ! | AAATTGAGAATTGGTTTAGC+GGG | - | chr3_2:63908829-63908848 | Msa0416870:three_prime_UTR | 30.0% |
| TGGATTTCTGACTATGTTAT+TGG | - | chr3_2:63909192-63909211 | Msa0416870:intron | 30.0% | |
| GGATTTCTGACTATGTTATT+GGG | - | chr3_2:63909193-63909212 | Msa0416870:intron | 30.0% | |
| AGCTAAATACATTGTAAAGC+TGG | - | chr3_2:63909359-63909378 | Msa0416870:intron | 30.0% | |
| GCTAAATACATTGTAAAGCT+GGG | - | chr3_2:63909360-63909379 | Msa0416870:intron | 30.0% | |
| GTATGACTAGGAATATAAGA+TGG | - | chr3_2:63909561-63909580 | Msa0416870:intron | 30.0% | |
| ! | CTTATGGTGTTCAAGTTAAA+TGG | + | chr3_2:63909590-63909609 | None:intergenic | 30.0% |
| TAAAAATGTGGCATCGTAAT+TGG | - | chr3_2:63909741-63909760 | Msa0416870:intron | 30.0% | |
| GTATTTCAAATCAATGGTGA+AGG | + | chr3_2:63910074-63910093 | None:intergenic | 30.0% | |
| TAAACTAGTGCCCAATATAA+TGG | - | chr3_2:63910198-63910217 | Msa0416870:intron | 30.0% | |
| !!! | ATAAGGGTTTTGAAGTTTGT+AGG | - | chr3_2:63910237-63910256 | Msa0416870:intron | 30.0% |
| ! | TTTGAAGTTTGTAGGATTGA+TGG | - | chr3_2:63910245-63910264 | Msa0416870:intron | 30.0% |
| ! | CAGTGAGATTTAAGATCAAT+CGG | - | chr3_2:63910270-63910289 | Msa0416870:CDS | 30.0% |
| GTATTTCAAATCAATGGTGA+AGG | + | chr3_2:63910074-63910093 | None:intergenic | 30.0% | |
| !!! | ATAAGGGTTTTGAAGTTTGT+AGG | - | chr3_2:63910237-63910256 | Msa0416870:intron | 30.0% |
| ! | TTTGAAGTTTGTAGGATTGA+TGG | - | chr3_2:63910245-63910264 | Msa0416870:intron | 30.0% |
| ! | GAACTTTGATATAAAAGTGC+AGG | - | chr3_2:63910539-63910558 | Msa0416870:intron | 30.0% |
| ! | AGTTTTTGCCAAAATTACAG+TGG | - | chr3_2:63910627-63910646 | Msa0416870:intron | 30.0% |
| CATGTGTTTAAGTAATAGTG+TGG | - | chr3_2:63910667-63910686 | Msa0416870:intron | 30.0% | |
| TTGTGGAAAAGAACAATAAC+CGG | - | chr3_2:63910795-63910814 | Msa0416870:intron | 30.0% | |
| TTTCCAGTAGCAATATATGA+TGG | - | chr3_2:63910946-63910965 | Msa0416870:five_prime_UTR | 30.0% | |
| !! | ATTTTCATTCTAGTTGACCA+TGG | + | chr3_2:63911331-63911350 | None:intergenic | 30.0% |
| GCTGTTTGCCAATTAAAATA+TGG | - | chr3_2:63911471-63911490 | Msa0416870:intron | 30.0% | |
| !! | TACGAGAAGCCATTATTTTA+AGG | - | chr3_2:63911603-63911622 | Msa0416870:intron | 30.0% |
| TATCTTGAGTACTCTGATAT+AGG | - | chr3_2:63911788-63911807 | Msa0416870:intron | 30.0% | |
| TTATTCTTCAAATGTTTGCC+AGG | - | chr3_2:63911993-63912012 | Msa0416870:intron | 30.0% | |
| ATCAAAGATGGACAAGTTAT+AGG | - | chr3_2:63912081-63912100 | Msa0416870:intron | 30.0% | |
| TTATAGGTTATGTGGATCAA+TGG | - | chr3_2:63912097-63912116 | Msa0416870:intron | 30.0% | |
| TATAGGTTATGTGGATCAAT+GGG | - | chr3_2:63912098-63912117 | Msa0416870:intron | 30.0% | |
| !! | GATATTTGACTTGAGTAGTT+TGG | - | chr3_2:63912276-63912295 | Msa0416870:intron | 30.0% |
| ATAGACTAATTTGAAGGCTA+TGG | - | chr3_2:63912517-63912536 | Msa0416870:intron | 30.0% | |
| GCAACAGAAATTAAATCAAC+AGG | + | chr3_2:63912559-63912578 | None:intergenic | 30.0% | |
| AGGAAAATCAGAATAGTGTT+TGG | - | chr3_2:63912693-63912712 | Msa0416870:five_prime_UTR | 30.0% | |
| ! | ATTTACCCTTTTGACATGTA+AGG | + | chr3_2:63912928-63912947 | None:intergenic | 30.0% |
| TAAATATCGTTAGACTGGAA+CGG | - | chr3_2:63912943-63912962 | Msa0416870:five_prime_UTR | 30.0% | |
| TTTCTAACAACACAAACTCT+TGG | + | chr3_2:63913233-63913252 | None:intergenic | 30.0% | |
| ! | ATGATAGTTATGTTTTCGAC+TGG | - | chr3_2:63913260-63913279 | Msa0416870:intron | 30.0% |
| ! | TGATAGTTATGTTTTCGACT+GGG | - | chr3_2:63913261-63913280 | Msa0416870:intron | 30.0% |
| GCTAACCAAAAAGGAAAATT+CGG | + | chr3_2:63913354-63913373 | None:intergenic | 30.0% | |
| CATTATGTTGCTAACCAAAA+AGG | + | chr3_2:63913363-63913382 | None:intergenic | 30.0% | |
| GGAAAATGGTTCAAGATAAT+TGG | + | chr3_2:63913393-63913412 | None:intergenic | 30.0% | |
| TCTGCAAGAATACAAAATGT+AGG | + | chr3_2:63913521-63913540 | None:intergenic | 30.0% | |
| GTGGTAGAGTTAAGATAAAA+AGG | + | chr3_2:63913616-63913635 | None:intergenic | 30.0% | |
| AGTTAAAATGGAGTGAATAG+TGG | + | chr3_2:63913635-63913654 | None:intergenic | 30.0% | |
| ! | TTGGGTCATTTGAGTTAAAA+TGG | + | chr3_2:63913647-63913666 | None:intergenic | 30.0% |
| ! | TTGCTGTTGATGAATACTTT+GGG | - | chr3_2:63913893-63913912 | Msa0416870:intron | 30.0% |
| ! | ATAGATGCACCAATTTTCTT+TGG | + | chr3_2:63913924-63913943 | None:intergenic | 30.0% |
| !! | ATGGTCTAGATTTTGGAAAT+CGG | + | chr3_2:63914022-63914041 | None:intergenic | 30.0% |
| ATTTCCAAAATCTAGACCAT+GGG | - | chr3_2:63914022-63914041 | Msa0416870:intron | 30.0% | |
| CCTCTCTACAAAAGAAAAAT+TGG | + | chr3_2:63914325-63914344 | None:intergenic | 30.0% | |
| ! | CCAATTTTTCTTTTGTAGAG+AGG | - | chr3_2:63914322-63914341 | Msa0416870:intron | 30.0% |
| TTATGATCATTTCCAAGAAC+AGG | + | chr3_2:63914404-63914423 | None:intergenic | 30.0% | |
| ATTCACTTCATAGTTCTTAC+TGG | + | chr3_2:63914449-63914468 | None:intergenic | 30.0% | |
| TAGAAAGATGTCACATTGTA+GGG | + | chr3_2:63914593-63914612 | None:intergenic | 30.0% | |
| ACGTGAATAGCAAAGAAAAT+AGG | + | chr3_2:63914700-63914719 | None:intergenic | 30.0% | |
| !! | AATACTGAAAGCATTTCAGA+AGG | - | chr3_2:63914816-63914835 | Msa0416870:intron | 30.0% |
| !! | ATACTGAAAGCATTTCAGAA+GGG | - | chr3_2:63914817-63914836 | Msa0416870:intron | 30.0% |
| GCAAAATAACATCTTGTCTT+TGG | - | chr3_2:63915049-63915068 | Msa0416870:intron | 30.0% | |
| ATGTTGGAAAAAAGATGAAC+CGG | + | chr3_2:63915187-63915206 | None:intergenic | 30.0% | |
| !!! | TTCATCTTTTTTCCAACATC+TGG | - | chr3_2:63915188-63915207 | Msa0416870:intron | 30.0% |
| ! | TTGTTGGAAAAGGGAAGTTT+TGG | + | chr3_2:63908575-63908594 | None:intergenic | 35.0% |
| !! | ATCCTTTTAGTTGAGTGCTT+TGG | - | chr3_2:63908618-63908637 | Msa0416870:intron | 35.0% |
| TGAAAATGGATCGATCAACA+CGG | + | chr3_2:63908684-63908703 | None:intergenic | 35.0% | |
| !! | GATTATTGAGTTTTGATCGG+TGG | - | chr3_2:63908803-63908822 | Msa0416870:three_prime_UTR | 35.0% |
| CGGTGGAAAAAATTGAGAAT+TGG | - | chr3_2:63908820-63908839 | Msa0416870:three_prime_UTR | 35.0% | |
| TGAATTGGGTGTTCTTATTG+AGG | - | chr3_2:63908999-63909018 | Msa0416870:intron | 35.0% | |
| AGATAGTGATCCTATGATAG+AGG | - | chr3_2:63909155-63909174 | Msa0416870:intron | 35.0% | |
| ! | GCATTTATTGTCATTTCTGC+AGG | - | chr3_2:63909280-63909299 | Msa0416870:intron | 35.0% |
| TGTAAAGTGCATACAAGGAT+TGG | - | chr3_2:63909313-63909332 | Msa0416870:intron | 35.0% | |
| !! | ATCAACTATGGTTTTTGAGC+CGG | + | chr3_2:63909513-63909532 | None:intergenic | 35.0% |
| ! | CGTGAATAGAAAGTATGACT+AGG | - | chr3_2:63909549-63909568 | Msa0416870:intron | 35.0% |
| AAGCATCAGTCATTCACTTA+TGG | + | chr3_2:63909606-63909625 | None:intergenic | 35.0% | |
| ! | TGAATGACTGATGCTTTTGT+AGG | - | chr3_2:63909610-63909629 | Msa0416870:intron | 35.0% |
| ! | GCAGTTTTACTTGATCAATG+AGG | - | chr3_2:63909853-63909872 | Msa0416870:three_prime_UTR | 35.0% |
| ! | GACTAAAGTGCCCAATATAA+TGG | - | chr3_2:63910456-63910475 | Msa0416870:intron | 35.0% |
| !! | ACAATGTGCCACTGTAATTT+TGG | + | chr3_2:63910638-63910657 | None:intergenic | 35.0% |
| AAGAATATGTTGTCTTCCTC+AGG | + | chr3_2:63910777-63910796 | None:intergenic | 35.0% | |
| AGGAAGACAACATATTCTTG+TGG | - | chr3_2:63910778-63910797 | Msa0416870:intron | 35.0% | |
| AAACACTGTATCTTTGCTTC+CGG | + | chr3_2:63910817-63910836 | None:intergenic | 35.0% | |
| ATTGAAACACTTGACCTTCA+TGG | + | chr3_2:63910882-63910901 | None:intergenic | 35.0% | |
| GATCCATCATATATTGCTAC+TGG | + | chr3_2:63910952-63910971 | None:intergenic | 35.0% | |
| !!! | CTTTTAGGATTGCTTCAATG+AGG | - | chr3_2:63911069-63911088 | Msa0416870:intron | 35.0% |
| GTTCTTCATTGTTGCCTAAT+TGG | - | chr3_2:63911106-63911125 | Msa0416870:intron | 35.0% | |
| TGTATGAGTACATGACAAGA+GGG | - | chr3_2:63911161-63911180 | Msa0416870:intron | 35.0% | |
| ! | TTCTTTGTTGTGATTCAAGC+AGG | - | chr3_2:63911289-63911308 | Msa0416870:intron | 35.0% |
| ACTGCACACTAATCCAAATT+GGG | + | chr3_2:63911447-63911466 | None:intergenic | 35.0% | |
| AACTGCACACTAATCCAAAT+TGG | + | chr3_2:63911448-63911467 | None:intergenic | 35.0% | |
| ATGTTACCCTAGATGAAGAT+TGG | + | chr3_2:63911703-63911722 | None:intergenic | 35.0% | |
| ACAACGTAAAATTACCCTAG+TGG | + | chr3_2:63911829-63911848 | None:intergenic | 35.0% | |
| TATGTTGTCATGTGACTGTA+AGG | - | chr3_2:63911848-63911867 | Msa0416870:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr3_2:63911900-63911919 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr3_2:63911899-63911918 | Msa0416870:intron | 35.0% | |
| AAGAATAAAAAAGGGCAACC+CGG | + | chr3_2:63911981-63912000 | None:intergenic | 35.0% | |
| TGCAAAAAATACGACAAACC+TGG | + | chr3_2:63912014-63912033 | None:intergenic | 35.0% | |
| TGGACAAGTTATAGGTTATG+TGG | - | chr3_2:63912089-63912108 | Msa0416870:intron | 35.0% | |
| ATAGGTTATGTGGATCAATG+GGG | - | chr3_2:63912099-63912118 | Msa0416870:intron | 35.0% | |
| ATTGCAAGATCACCTTAACA+GGG | + | chr3_2:63912134-63912153 | None:intergenic | 35.0% | |
| AATTGCAAGATCACCTTAAC+AGG | + | chr3_2:63912135-63912154 | None:intergenic | 35.0% | |
| ATGCTTCCGTTAATTAAGAG+TGG | - | chr3_2:63912354-63912373 | Msa0416870:intron | 35.0% | |
| AAGCAGTAACTATTTGCAAC+TGG | + | chr3_2:63912624-63912643 | None:intergenic | 35.0% | |
| GCTTGAGCTATATGATCAAA+TGG | - | chr3_2:63912640-63912659 | Msa0416870:five_prime_UTR | 35.0% | |
| GTGATCATTTGATTCATAGC+AGG | - | chr3_2:63912673-63912692 | Msa0416870:five_prime_UTR | 35.0% | |
| AAGGGTAAATATCGTTAGAC+TGG | - | chr3_2:63912938-63912957 | Msa0416870:five_prime_UTR | 35.0% | |
| AAATATCGTTAGACTGGAAC+GGG | - | chr3_2:63912944-63912963 | Msa0416870:five_prime_UTR | 35.0% | |
| TGACTAACCAAGTGATAAAC+TGG | + | chr3_2:63913068-63913087 | None:intergenic | 35.0% | |
| ! | TGATCCTTTTGGTATGCTTT+TGG | - | chr3_2:63913106-63913125 | Msa0416870:intron | 35.0% |
| ! | AACACCAAAAGCATACCAAA+AGG | + | chr3_2:63913113-63913132 | None:intergenic | 35.0% |
| ! | TATGTTTTCGACTGGGTTAA+AGG | - | chr3_2:63913268-63913287 | Msa0416870:intron | 35.0% |
| ! | TCAAGCCGAATTTTCCTTTT+TGG | - | chr3_2:63913346-63913365 | Msa0416870:intron | 35.0% |
| AATTGTACACTATCTTGACG+AGG | - | chr3_2:63913488-63913507 | Msa0416870:intron | 35.0% | |
| ATAAACATTGCAGCTGTATC+GGG | + | chr3_2:63913745-63913764 | None:intergenic | 35.0% | |
| GATAAACATTGCAGCTGTAT+CGG | + | chr3_2:63913746-63913765 | None:intergenic | 35.0% | |
| ! | CAAGTTCATCGGTTAATGAT+AGG | - | chr3_2:63913827-63913846 | Msa0416870:intron | 35.0% |
| ! | GCAACTACATCTTCATTTTC+AGG | + | chr3_2:63913877-63913896 | None:intergenic | 35.0% |
| ! | GTTGCTGTTGATGAATACTT+TGG | - | chr3_2:63913892-63913911 | Msa0416870:intron | 35.0% |
| TGGGCAATACCAAAGAAAAT+TGG | - | chr3_2:63913912-63913931 | Msa0416870:intron | 35.0% | |
| AAAATTGGTGCATCTATGCA+TGG | - | chr3_2:63913927-63913946 | Msa0416870:intron | 35.0% | |
| GATTTCCAAAATCTAGACCA+TGG | - | chr3_2:63914021-63914040 | Msa0416870:intron | 35.0% | |
| TTTCCAAAATCTAGACCATG+GGG | - | chr3_2:63914023-63914042 | Msa0416870:intron | 35.0% | |
| CAAATGCACAGTACATGAAA+TGG | + | chr3_2:63914140-63914159 | None:intergenic | 35.0% | |
| TTCAGGAAGGTAAATGTCAA+CGG | - | chr3_2:63914166-63914185 | Msa0416870:intron | 35.0% | |
| ! | ACAGAACAATATGGTTCTGT+GGG | + | chr3_2:63914200-63914219 | None:intergenic | 35.0% |
| ! | AACAGAACAATATGGTTCTG+TGG | + | chr3_2:63914201-63914220 | None:intergenic | 35.0% |
| CATATAATGTGTTCAGTGCT+AGG | - | chr3_2:63914246-63914265 | Msa0416870:intron | 35.0% | |
| AAATGCAAACCCTATCCAAA+AGG | + | chr3_2:63914285-63914304 | None:intergenic | 35.0% | |
| AGAAAGATGTCACATTGTAG+GGG | + | chr3_2:63914592-63914611 | None:intergenic | 35.0% | |
| GTAGAAAGATGTCACATTGT+AGG | + | chr3_2:63914594-63914613 | None:intergenic | 35.0% | |
| CATGCAAAGAAGTAAGATAC+TGG | + | chr3_2:63914735-63914754 | None:intergenic | 35.0% | |
| TTCTTTGCATGTTGCTCATA+TGG | - | chr3_2:63914744-63914763 | Msa0416870:intron | 35.0% | |
| !! | TACTGAAAGCATTTCAGAAG+GGG | - | chr3_2:63914818-63914837 | Msa0416870:intron | 35.0% |
| ACTTGGTTGACAGAAAATTG+TGG | + | chr3_2:63915116-63915135 | None:intergenic | 35.0% | |
| AAGTTGTTCAGCTTCTTGAA+CGG | - | chr3_2:63915132-63915151 | Msa0416870:intron | 35.0% | |
| CATTGAACTAAACACACTTC+CGG | - | chr3_2:63915165-63915184 | Msa0416870:intron | 35.0% | |
| !!! | TTTTTTCCAACATCTGGATG+TGG | - | chr3_2:63915194-63915213 | Msa0416870:intron | 35.0% |
| ! | TTTTTCCAACATCTGGATGT+GGG | - | chr3_2:63915195-63915214 | Msa0416870:intron | 35.0% |
| ! | CTCCAAAGCACTCAACTAAA+AGG | + | chr3_2:63908623-63908642 | None:intergenic | 40.0% |
| !! | TTTAGTTGAGTGCTTTGGAG+TGG | - | chr3_2:63908623-63908642 | Msa0416870:three_prime_UTR | 40.0% |
| TAGTGATCCTATGATAGAGG+TGG | - | chr3_2:63909158-63909177 | Msa0416870:intron | 40.0% | |
| ATCCTATGATAGAGGTGGTT+TGG | - | chr3_2:63909163-63909182 | Msa0416870:intron | 40.0% | |
| TCCTATGATAGAGGTGGTTT+GGG | - | chr3_2:63909164-63909183 | Msa0416870:intron | 40.0% | |
| ! | GGTAAGAGTTCATTTTCCAG+AGG | - | chr3_2:63909214-63909233 | Msa0416870:intron | 40.0% |
| ! | AGCTGAGCATTTAAAACCTC+TGG | + | chr3_2:63909233-63909252 | None:intergenic | 40.0% |
| TACCATCTAGATGAGTGCAA+AGG | - | chr3_2:63909815-63909834 | Msa0416870:three_prime_UTR | 40.0% | |
| TTCCTTTGCACTCATCTAGA+TGG | + | chr3_2:63909820-63909839 | None:intergenic | 40.0% | |
| AGTGCAAAGGAAGAGATTGT+GGG | - | chr3_2:63909828-63909847 | Msa0416870:three_prime_UTR | 40.0% | |
| GAACAAAACATGACTGTGAG+TGG | + | chr3_2:63910107-63910126 | None:intergenic | 40.0% | |
| GAACAAAACATGACTGTGAG+TGG | + | chr3_2:63910107-63910126 | None:intergenic | 40.0% | |
| ! | GATTGATGGTTCAGTGAGAT+TGG | - | chr3_2:63910259-63910278 | Msa0416870:CDS | 40.0% |
| !! | TGGTATATCTGCTTTTCCTG+AGG | - | chr3_2:63910758-63910777 | Msa0416870:intron | 40.0% |
| ! | TCTGATTTTCTCAGCTGCTT+TGG | - | chr3_2:63911027-63911046 | Msa0416870:five_prime_UTR | 40.0% |
| CCTCACAACAGTATCCAATT+AGG | + | chr3_2:63911123-63911142 | None:intergenic | 40.0% | |
| CCTAATTGGATACTGTTGTG+AGG | - | chr3_2:63911120-63911139 | Msa0416870:intron | 40.0% | |
| AATTGGATACTGTTGTGAGG+AGG | - | chr3_2:63911123-63911142 | Msa0416870:intron | 40.0% | |
| GTGTATGAGTACATGACAAG+AGG | - | chr3_2:63911160-63911179 | Msa0416870:intron | 40.0% | |
| GATACTCTGCTACATTACCA+TGG | - | chr3_2:63911311-63911330 | Msa0416870:intron | 40.0% | |
| AATTGCATTAGGTGCAGCTA+AGG | - | chr3_2:63911348-63911367 | Msa0416870:intron | 40.0% | |
| ATTGCATTAGGTGCAGCTAA+GGG | - | chr3_2:63911349-63911368 | Msa0416870:intron | 40.0% | |
| TCAACAGGTATGACCCAATT+TGG | - | chr3_2:63911431-63911450 | Msa0416870:intron | 40.0% | |
| ! | CGTGTTTGTTGAAACGTTAG+AGG | - | chr3_2:63911537-63911556 | Msa0416870:intron | 40.0% |
| TGCTTTGCCAATCTTCATCT+AGG | - | chr3_2:63911693-63911712 | Msa0416870:intron | 40.0% | |
| GCTTTGCCAATCTTCATCTA+GGG | - | chr3_2:63911694-63911713 | Msa0416870:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr3_2:63911893-63911912 | Msa0416870:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr3_2:63911894-63911913 | Msa0416870:intron | 40.0% | |
| CGTACAATACACCCAATGAT+GGG | - | chr3_2:63911925-63911944 | Msa0416870:intron | 40.0% | |
| CAGGGTGATATGATCAAAGA+TGG | - | chr3_2:63912069-63912088 | Msa0416870:intron | 40.0% | |
| TCTGTTGCTCTTTCTTAGCA+TGG | - | chr3_2:63912571-63912590 | Msa0416870:intron | 40.0% | |
| ! | CTCTTTGCTAGTTTAAGCCT+TGG | + | chr3_2:63912901-63912920 | None:intergenic | 40.0% |
| CAAGGCTTAAACTAGCAAAG+AGG | - | chr3_2:63912899-63912918 | Msa0416870:five_prime_UTR | 40.0% | |
| ACCTACTCCAGTTTATCACT+TGG | - | chr3_2:63913058-63913077 | Msa0416870:five_prime_UTR | 40.0% | |
| ACCAAGTGATAAACTGGAGT+AGG | + | chr3_2:63913062-63913081 | None:intergenic | 40.0% | |
| GATCAAAGTATAGGCAGAGA+AGG | + | chr3_2:63913310-63913329 | None:intergenic | 40.0% | |
| !! | TTGCAGAGTGTTGCAAAGAT+GGG | - | chr3_2:63913534-63913553 | Msa0416870:intron | 40.0% |
| TATGTCATGCACAACGAACA+TGG | - | chr3_2:63913562-63913581 | Msa0416870:intron | 40.0% | |
| TAACTCAAATGACCCAATGC+AGG | - | chr3_2:63913650-63913669 | Msa0416870:intron | 40.0% | |
| AACTCAAATGACCCAATGCA+GGG | - | chr3_2:63913651-63913670 | Msa0416870:intron | 40.0% | |
| CAATCTCTGCATGGATTTCA+TGG | + | chr3_2:63913777-63913796 | None:intergenic | 40.0% | |
| AGTCAGAAACAATCTCTGCA+TGG | + | chr3_2:63913786-63913805 | None:intergenic | 40.0% | |
| !! | TGCAGAGATTGTTTCTGACT+TGG | - | chr3_2:63913786-63913805 | Msa0416870:intron | 40.0% |
| !! | GCAGAGATTGTTTCTGACTT+GGG | - | chr3_2:63913787-63913806 | Msa0416870:intron | 40.0% |
| !! | GTTTCTGACTTGGGTATTAC+TGG | - | chr3_2:63913796-63913815 | Msa0416870:intron | 40.0% |
| TGGCGATGAATCAAGTTCAT+CGG | - | chr3_2:63913816-63913835 | Msa0416870:intron | 40.0% | |
| ! | GTGCATCTATGCATGGATTA+AGG | - | chr3_2:63913934-63913953 | Msa0416870:intron | 40.0% |
| !! | CTAGATTTTGGAAATCGGCT+AGG | + | chr3_2:63914017-63914036 | None:intergenic | 40.0% |
| !! | CTGTGCATTTGCTTTGTTTC+AGG | - | chr3_2:63914149-63914168 | Msa0416870:intron | 40.0% |
| !! | GCATTTGCTTTGTTTCAGGA+AGG | - | chr3_2:63914153-63914172 | Msa0416870:intron | 40.0% |
| ! | CAGAACAATATGGTTCTGTG+GGG | + | chr3_2:63914199-63914218 | None:intergenic | 40.0% |
| AAACCCTATCCAAAAGGACT+GGG | + | chr3_2:63914279-63914298 | None:intergenic | 40.0% | |
| CATGTTGCTCATATGGTGAA+TGG | - | chr3_2:63914751-63914770 | Msa0416870:intron | 40.0% | |
| ! | GGAGCACCAAAAATACTTGA+CGG | - | chr3_2:63914987-63915006 | Msa0416870:intron | 40.0% |
| GAGCACCAAAAATACTTGAC+GGG | - | chr3_2:63914988-63915007 | Msa0416870:intron | 40.0% | |
| AGCACCAAAAATACTTGACG+GGG | - | chr3_2:63914989-63915008 | Msa0416870:intron | 40.0% | |
| ! | ATGTCCCCGTCAAGTATTTT+TGG | + | chr3_2:63914996-63915015 | None:intergenic | 40.0% |
| ACAGAAAATTGTGGTAGGAG+TGG | + | chr3_2:63915107-63915126 | None:intergenic | 40.0% | |
| GGTTGACAGAAAATTGTGGT+AGG | + | chr3_2:63915112-63915131 | None:intergenic | 40.0% | |
| GTTCAAGAAGCTGAACAACT+TGG | + | chr3_2:63915133-63915152 | None:intergenic | 40.0% | |
| AGTTGTTCAGCTTCTTGAAC+GGG | - | chr3_2:63915133-63915152 | Msa0416870:intron | 40.0% | |
| !! | AGGGAGTCTGATTTGTTGTG+GGG | + | chr3_2:63908507-63908526 | None:intergenic | 45.0% |
| !! | GAGGGAGTCTGATTTGTTGT+GGG | + | chr3_2:63908508-63908527 | None:intergenic | 45.0% |
| AAAGGGACGACAATGAGAGA+GGG | + | chr3_2:63908531-63908550 | None:intergenic | 45.0% | |
| ! | TGAGAATTGGTTTAGCGGGT+CGG | - | chr3_2:63908833-63908852 | Msa0416870:three_prime_UTR | 45.0% |
| ACCCAAACCACCTCTATCAT+AGG | + | chr3_2:63909168-63909187 | None:intergenic | 45.0% | |
| ! | TATGATAGAGGTGGTTTGGG+TGG | - | chr3_2:63909167-63909186 | Msa0416870:intron | 45.0% |
| ! | CTTCTGCTTGCTAGAGACAA+GGG | - | chr3_2:63909397-63909416 | Msa0416870:three_prime_UTR | 45.0% |
| ! | TTCTGCTTGCTAGAGACAAG+GGG | - | chr3_2:63909398-63909417 | Msa0416870:three_prime_UTR | 45.0% |
| GAGTGCAAAGGAAGAGATTG+TGG | - | chr3_2:63909827-63909846 | Msa0416870:three_prime_UTR | 45.0% | |
| GTGCAAAGGAAGAGATTGTG+GGG | - | chr3_2:63909829-63909848 | Msa0416870:three_prime_UTR | 45.0% | |
| TGATTGGACTGTCAGATGAG+TGG | - | chr3_2:63910729-63910748 | Msa0416870:intron | 45.0% | |
| TGTCAGATGAGTGGTGATTC+TGG | - | chr3_2:63910738-63910757 | Msa0416870:intron | 45.0% | |
| GGCTCTGCTTAACAATCAAC+AGG | - | chr3_2:63911416-63911435 | Msa0416870:intron | 45.0% | |
| CTTCTCGTATACGTTCGTAC+AGG | + | chr3_2:63911592-63911611 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr3_2:63911854-63911873 | Msa0416870:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr3_2:63911855-63911874 | Msa0416870:intron | 45.0% | |
| ! | TACACAAGAGGCTGTTTCCA+AGG | + | chr3_2:63911888-63911907 | None:intergenic | 45.0% |
| GCGTACAATACACCCAATGA+TGG | - | chr3_2:63911924-63911943 | Msa0416870:intron | 45.0% | |
| GAAAGTCAGGAGCTGTACTT+AGG | + | chr3_2:63912177-63912196 | None:intergenic | 45.0% | |
| TCAAACCTTGCAGTCAGATG+TGG | - | chr3_2:63912205-63912224 | Msa0416870:intron | 45.0% | |
| CAACAGGACATGAGAGAGTA+AGG | + | chr3_2:63912543-63912562 | None:intergenic | 45.0% | |
| ! | TGTGCAGGTTGAGATTGTGA+TGG | - | chr3_2:63912776-63912795 | Msa0416870:five_prime_UTR | 45.0% |
| ! | GTGCAGGTTGAGATTGTGAT+GGG | - | chr3_2:63912777-63912796 | Msa0416870:five_prime_UTR | 45.0% |
| ! | TGAGATTGTGATGGGACTTG+AGG | - | chr3_2:63912785-63912804 | Msa0416870:five_prime_UTR | 45.0% |
| ATGGGACTTGAGGTGGAATT+TGG | - | chr3_2:63912795-63912814 | Msa0416870:five_prime_UTR | 45.0% | |
| GGTGGAATTTGGCATTAGTG+TGG | - | chr3_2:63912806-63912825 | Msa0416870:five_prime_UTR | 45.0% | |
| CATGTCAGCAGCTTCTTGAA+CGG | + | chr3_2:63912859-63912878 | None:intergenic | 45.0% | |
| TGACAAGCTTCTTGAGACCA+AGG | - | chr3_2:63912881-63912900 | Msa0416870:five_prime_UTR | 45.0% | |
| GGCTTAAACTAGCAAAGAGG+AGG | - | chr3_2:63912902-63912921 | Msa0416870:five_prime_UTR | 45.0% | |
| AGGAGGCCTTACATGTCAAA+AGG | - | chr3_2:63912919-63912938 | Msa0416870:five_prime_UTR | 45.0% | |
| GGAGGCCTTACATGTCAAAA+GGG | - | chr3_2:63912920-63912939 | Msa0416870:five_prime_UTR | 45.0% | |
| !! | CTGGAACGGGAAATTTTGAC+TGG | - | chr3_2:63912957-63912976 | Msa0416870:five_prime_UTR | 45.0% |
| ! | ACACACACAACACACGCTTT+TGG | + | chr3_2:63912993-63913012 | None:intergenic | 45.0% |
| GGTTAGCAACATAATGCACG+TGG | - | chr3_2:63913367-63913386 | Msa0416870:intron | 45.0% | |
| !! | CTTGCAGAGTGTTGCAAAGA+TGG | - | chr3_2:63913533-63913552 | Msa0416870:intron | 45.0% |
| TGCACAACGAACATGGTATC+TGG | - | chr3_2:63913569-63913588 | Msa0416870:intron | 45.0% | |
| ACAACGAACATGGTATCTGG+AGG | - | chr3_2:63913572-63913591 | Msa0416870:intron | 45.0% | |
| CAAAATCAGAGCCCTGCATT+GGG | + | chr3_2:63913665-63913684 | None:intergenic | 45.0% | |
| ACAAAATCAGAGCCCTGCAT+TGG | + | chr3_2:63913666-63913685 | None:intergenic | 45.0% | |
| ! | CTGATTTTGTATGTTGCCGC+TGG | - | chr3_2:63913676-63913695 | Msa0416870:intron | 45.0% |
| ! | TGGTGCACTACAAGAAGCAT+TGG | - | chr3_2:63913696-63913715 | Msa0416870:intron | 45.0% |
| CATGGATTTCATGGCATGCA+AGG | + | chr3_2:63913768-63913787 | None:intergenic | 45.0% | |
| ! | TCACCCCATGGTCTAGATTT+TGG | + | chr3_2:63914029-63914048 | None:intergenic | 45.0% |
| AAAATCTAGACCATGGGGTG+AGG | - | chr3_2:63914028-63914047 | Msa0416870:intron | 45.0% | |
| AAATCTAGACCATGGGGTGA+GGG | - | chr3_2:63914029-63914048 | Msa0416870:intron | 45.0% | |
| ! | GGATAATACCCCAGTCCTTT+TGG | - | chr3_2:63914267-63914286 | Msa0416870:intron | 45.0% |
| ! | ATACCCCAGTCCTTTTGGAT+AGG | - | chr3_2:63914272-63914291 | Msa0416870:intron | 45.0% |
| ! | TACCCCAGTCCTTTTGGATA+GGG | - | chr3_2:63914273-63914292 | Msa0416870:intron | 45.0% |
| AACCCTATCCAAAAGGACTG+GGG | + | chr3_2:63914278-63914297 | None:intergenic | 45.0% | |
| CAAACCCTATCCAAAAGGAC+TGG | + | chr3_2:63914280-63914299 | None:intergenic | 45.0% | |
| GAACAGGTGCAGTCAAATGA+TGG | + | chr3_2:63914388-63914407 | None:intergenic | 45.0% | |
| CATTTGACTGCACCTGTTCT+TGG | - | chr3_2:63914389-63914408 | Msa0416870:intron | 45.0% | |
| !! | GAAAGCATTTCAGAAGGGGA+AGG | - | chr3_2:63914822-63914841 | Msa0416870:intron | 45.0% |
| GGACATGTTGACACAGTTTC+TGG | - | chr3_2:63915010-63915029 | Msa0416870:intron | 45.0% | |
| !! | GTCTTTGGAACCACTTGATG+CGG | - | chr3_2:63915064-63915083 | Msa0416870:intron | 45.0% |
| !! | CTTGCTTTTACCGCATCAAG+TGG | + | chr3_2:63915077-63915096 | None:intergenic | 45.0% |
| !! | TCAAATTAATTAAAAAAAAA+AGG | - | chr3_2:63911743-63911762 | Msa0416870:five_prime_UTR | 5.0% |
| ! | AGTACCGGAGAAGAATTCGC+CGG | - | chr3_2:63908466-63908485 | Msa0416870:three_prime_UTR | 50.0% |
| !! | GGAGGGAGTCTGATTTGTTG+TGG | + | chr3_2:63908509-63908528 | None:intergenic | 50.0% |
| AAGGGACGACAATGAGAGAG+GGG | + | chr3_2:63908530-63908549 | None:intergenic | 50.0% | |
| GAAAGGGACGACAATGAGAG+AGG | + | chr3_2:63908532-63908551 | None:intergenic | 50.0% | |
| TGGATCGATCAACACGGAAG+AGG | + | chr3_2:63908678-63908697 | None:intergenic | 50.0% | |
| ! | GCTTCTGCTTGCTAGAGACA+AGG | - | chr3_2:63909396-63909415 | Msa0416870:intron | 50.0% |
| GTACATGACAAGAGGGAGCT+TGG | - | chr3_2:63911168-63911187 | Msa0416870:intron | 50.0% | |
| GTCAGGAGCTGTACTTAGGA+AGG | + | chr3_2:63912173-63912192 | None:intergenic | 50.0% | |
| ACCTTGCAGTCAGATGTGGA+TGG | - | chr3_2:63912209-63912228 | Msa0416870:intron | 50.0% | |
| TCCATCCACATCTGACTGCA+AGG | + | chr3_2:63912213-63912232 | None:intergenic | 50.0% | |
| TTGCAGTCAGATGTGGATGG+AGG | - | chr3_2:63912212-63912231 | Msa0416870:intron | 50.0% | |
| ! | GATTGTGATGGGACTTGAGG+TGG | - | chr3_2:63912788-63912807 | Msa0416870:five_prime_UTR | 50.0% |
| !! | TTGAACGGTGGTGATGGTCT+GGG | + | chr3_2:63912844-63912863 | None:intergenic | 50.0% |
| AGCTTCTTGAACGGTGGTGA+TGG | + | chr3_2:63912850-63912869 | None:intergenic | 50.0% | |
| !! | AGAGTGTTGCAAAGATGGGC+TGG | - | chr3_2:63913538-63913557 | Msa0416870:intron | 50.0% |
| TGCTTCTTGTAGTGCACCAG+CGG | + | chr3_2:63913695-63913714 | None:intergenic | 50.0% | |
| GAGGGAGGTAAAGAGCTCAA+CGG | - | chr3_2:63914047-63914066 | Msa0416870:intron | 50.0% | |
| TGAGCTCTTAGAAGCTGTGC+AGG | - | chr3_2:63914349-63914368 | Msa0416870:intron | 50.0% | |
| ATTTCAGAAGGGGAAGGCCA+TGG | - | chr3_2:63914828-63914847 | Msa0416870:intron | 50.0% | |
| TGCTTCCCACATCCAGATGT+TGG | + | chr3_2:63915203-63915222 | None:intergenic | 50.0% | |
| GACGACAATGAGAGAGGGGA+GGG | + | chr3_2:63908526-63908545 | None:intergenic | 55.0% | |
| ! | TAGAGGTGGTTTGGGTGGCT+TGG | - | chr3_2:63909172-63909191 | Msa0416870:intron | 55.0% |
| ATTAGGCCAAGTAGCGCTGC+CGG | - | chr3_2:63909491-63909510 | Msa0416870:intron | 55.0% | |
| ACTGTTGTGAGGAGGAGCAG+AGG | - | chr3_2:63911131-63911150 | Msa0416870:intron | 55.0% | |
| ! | TGAGGAGGAGCAGAGGCTTT+TGG | - | chr3_2:63911138-63911157 | Msa0416870:intron | 55.0% |
| TGTGAGAGCTGCAGTTGCTG+AGG | + | chr3_2:63911393-63911412 | None:intergenic | 55.0% | |
| AGGTCACGGGTTCAAGTCCT+TGG | - | chr3_2:63911868-63911887 | Msa0416870:intron | 55.0% | |
| GGGCACTTCACTCCCTGTTA+AGG | - | chr3_2:63912119-63912138 | Msa0416870:intron | 55.0% | |
| !! | CTTGAACGGTGGTGATGGTC+TGG | + | chr3_2:63912845-63912864 | None:intergenic | 55.0% |
| GTCAGCAGCTTCTTGAACGG+TGG | + | chr3_2:63912856-63912875 | None:intergenic | 55.0% | |
| !! | AGCATTGGCAGCTCTTCGTG+AGG | - | chr3_2:63913711-63913730 | Msa0416870:intron | 55.0% |
| TCTTTACCTCCCTCACCCCA+TGG | + | chr3_2:63914041-63914060 | None:intergenic | 55.0% | |
| ! | AGTGCCGGAGAAGAAGTCGC+CGG | - | chr3_2:63908432-63908451 | Msa0416870:three_prime_UTR | 60.0% |
| ACCGGAGAAGAATTCGCCGG+CGG | - | chr3_2:63908469-63908488 | Msa0416870:three_prime_UTR | 60.0% | |
| ACCGCCGGCGAATTCTTCTC+CGG | + | chr3_2:63908473-63908492 | None:intergenic | 60.0% | |
| GAGAAGAATTCGCCGGCGGT+GGG | - | chr3_2:63908473-63908492 | Msa0416870:three_prime_UTR | 60.0% | |
| GGACGACAATGAGAGAGGGG+AGG | + | chr3_2:63908527-63908546 | None:intergenic | 60.0% | |
| TTTGAGCCGGCAGCGCTACT+TGG | + | chr3_2:63909500-63909519 | None:intergenic | 60.0% | |
| GCAACTGCAGCTCTCACAGC+AGG | - | chr3_2:63911395-63911414 | Msa0416870:intron | 60.0% | |
| CGGGAAGGGGTCCCATCATT+GGG | + | chr3_2:63911939-63911958 | None:intergenic | 60.0% | |
| ! | CCAATGATGGGACCCCTTCC+CGG | - | chr3_2:63911937-63911956 | Msa0416870:intron | 60.0% |
| TGATACGCAGGGTCCGGGAA+GGG | + | chr3_2:63911953-63911972 | None:intergenic | 60.0% | |
| ! | TGCACTGATACGCAGGGTCC+GGG | + | chr3_2:63911958-63911977 | None:intergenic | 60.0% |
| ! | GTGCACTGATACGCAGGGTC+CGG | + | chr3_2:63911959-63911978 | None:intergenic | 60.0% |
| GACCCTGCGTATCAGTGCAC+CGG | - | chr3_2:63911959-63911978 | Msa0416870:intron | 60.0% | |
| ACCCTGCGTATCAGTGCACC+GGG | - | chr3_2:63911960-63911979 | Msa0416870:intron | 60.0% | |
| ! | ACCCGGTGCACTGATACGCA+GGG | + | chr3_2:63911964-63911983 | None:intergenic | 60.0% |
| ! | AACCCGGTGCACTGATACGC+AGG | + | chr3_2:63911965-63911984 | None:intergenic | 60.0% |
| TCTAGACCATGGGGTGAGGG+AGG | - | chr3_2:63914032-63914051 | Msa0416870:intron | 60.0% | |
| GGTCGAGGGAGAGAGAGGGA+GGG | - | chr3_2:63908406-63908425 | Msa0416870:three_prime_UTR | 65.0% | |
| ! | AGAGAGGGAGGGAGGAGTGC+CGG | - | chr3_2:63908417-63908436 | Msa0416870:three_prime_UTR | 65.0% |
| ACCGCCGGCGACTTCTTCTC+CGG | + | chr3_2:63908439-63908458 | None:intergenic | 65.0% | |
| GAGAAGAAGTCGCCGGCGGT+GGG | - | chr3_2:63908439-63908458 | Msa0416870:three_prime_UTR | 65.0% | |
| GGAGAAGAATTCGCCGGCGG+TGG | - | chr3_2:63908472-63908491 | Msa0416870:three_prime_UTR | 65.0% | |
| GAATTCGCCGGCGGTGGGAT+TGG | - | chr3_2:63908478-63908497 | Msa0416870:three_prime_UTR | 65.0% | |
| GGGGAATCCAATCCCACCGC+CGG | + | chr3_2:63908488-63908507 | None:intergenic | 65.0% | |
| CCGGGAAGGGGTCCCATCAT+TGG | + | chr3_2:63911940-63911959 | None:intergenic | 65.0% | |
| GATACGCAGGGTCCGGGAAG+GGG | + | chr3_2:63911952-63911971 | None:intergenic | 65.0% | |
| CTGATACGCAGGGTCCGGGA+AGG | + | chr3_2:63911954-63911973 | None:intergenic | 65.0% | |
| GGGTCGAGGGAGAGAGAGGG+AGG | - | chr3_2:63908405-63908424 | Msa0416870:three_prime_UTR | 70.0% | |
| CGAGGGAGAGAGAGGGAGGG+AGG | - | chr3_2:63908409-63908428 | Msa0416870:three_prime_UTR | 70.0% | |
| GCCGGAGAAGAAGTCGCCGG+CGG | - | chr3_2:63908435-63908454 | Msa0416870:three_prime_UTR | 70.0% | |
| GGAGAAGAAGTCGCCGGCGG+TGG | - | chr3_2:63908438-63908457 | Msa0416870:three_prime_UTR | 70.0% | |
| AAGAAGTCGCCGGCGGTGGG+AGG | - | chr3_2:63908442-63908461 | Msa0416870:three_prime_UTR | 70.0% | |
| AGAAGTCGCCGGCGGTGGGA+GGG | - | chr3_2:63908443-63908462 | Msa0416870:three_prime_UTR | 70.0% | |
| CCGGTACTCCCTCCCACCGC+CGG | + | chr3_2:63908454-63908473 | None:intergenic | 75.0% | |
| ! | CCGGCGGTGGGAGGGAGTAC+CGG | - | chr3_2:63908451-63908470 | Msa0416870:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 63908403 | 63915442 | 63908403 | ID=Msa0416870;Name=Msa0416870 |
| chr3_2 | mRNA | 63908403 | 63915442 | 63908403 | ID=Msa0416870-mRNA-1;Parent=Msa0416870;Name=Msa0416870-mRNA-1;_AED=0.10;_eAED=0.10;_QI=1393|1|1|1|0.14|0.26|15|626|115 |
| chr3_2 | exon | 63908403 | 63908574 | 63908403 | ID=Msa0416870-mRNA-1:exon:14022;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63908619 | 63908864 | 63908619 | ID=Msa0416870-mRNA-1:exon:14021;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63909397 | 63909505 | 63909397 | ID=Msa0416870-mRNA-1:exon:14020;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63909792 | 63910173 | 63909792 | ID=Msa0416870-mRNA-1:exon:14019;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63910252 | 63910305 | 63910252 | ID=Msa0416870-mRNA-1:exon:14018;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63910904 | 63911062 | 63910904 | ID=Msa0416870-mRNA-1:exon:14017;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63911612 | 63911627 | 63911612 | ID=Msa0416870-mRNA-1:exon:14016;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63911705 | 63911773 | 63911705 | ID=Msa0416870-mRNA-1:exon:14015;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63912408 | 63912534 | 63912408 | ID=Msa0416870-mRNA-1:exon:14014;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63912637 | 63913101 | 63912637 | ID=Msa0416870-mRNA-1:exon:14013;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63913285 | 63913328 | 63913285 | ID=Msa0416870-mRNA-1:exon:14012;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63913962 | 63914030 | 63913962 | ID=Msa0416870-mRNA-1:exon:14011;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63914395 | 63914543 | 63914395 | ID=Msa0416870-mRNA-1:exon:14010;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63914631 | 63914694 | 63914631 | ID=Msa0416870-mRNA-1:exon:14009;Parent=Msa0416870-mRNA-1 |
| chr3_2 | exon | 63915201 | 63915442 | 63915201 | ID=Msa0416870-mRNA-1:exon:14008;Parent=Msa0416870-mRNA-1 |
| chr3_2 | five_prime_UTR | 63915201 | 63915442 | 63915201 | ID=Msa0416870-mRNA-1:five_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | five_prime_UTR | 63914631 | 63914694 | 63914631 | ID=Msa0416870-mRNA-1:five_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | five_prime_UTR | 63914395 | 63914543 | 63914395 | ID=Msa0416870-mRNA-1:five_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | five_prime_UTR | 63913962 | 63914030 | 63913962 | ID=Msa0416870-mRNA-1:five_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | five_prime_UTR | 63913285 | 63913328 | 63913285 | ID=Msa0416870-mRNA-1:five_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | five_prime_UTR | 63912637 | 63913101 | 63912637 | ID=Msa0416870-mRNA-1:five_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | five_prime_UTR | 63912408 | 63912534 | 63912408 | ID=Msa0416870-mRNA-1:five_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | five_prime_UTR | 63911705 | 63911773 | 63911705 | ID=Msa0416870-mRNA-1:five_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | five_prime_UTR | 63911612 | 63911627 | 63911612 | ID=Msa0416870-mRNA-1:five_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | five_prime_UTR | 63910915 | 63911062 | 63910915 | ID=Msa0416870-mRNA-1:five_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | CDS | 63910904 | 63910914 | 63910904 | ID=Msa0416870-mRNA-1:cds;Parent=Msa0416870-mRNA-1 |
| chr3_2 | CDS | 63910252 | 63910305 | 63910252 | ID=Msa0416870-mRNA-1:cds;Parent=Msa0416870-mRNA-1 |
| chr3_2 | CDS | 63909891 | 63910173 | 63909891 | ID=Msa0416870-mRNA-1:cds;Parent=Msa0416870-mRNA-1 |
| chr3_2 | three_prime_UTR | 63909792 | 63909890 | 63909792 | ID=Msa0416870-mRNA-1:three_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | three_prime_UTR | 63909397 | 63909505 | 63909397 | ID=Msa0416870-mRNA-1:three_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | three_prime_UTR | 63908619 | 63908864 | 63908619 | ID=Msa0416870-mRNA-1:three_prime_utr;Parent=Msa0416870-mRNA-1 |
| chr3_2 | three_prime_UTR | 63908403 | 63908574 | 63908403 | ID=Msa0416870-mRNA-1:three_prime_utr;Parent=Msa0416870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
