Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337130 | XP_013465074.1 | 97.764 | 313 | 7 | 0 | 35 | 347 | 1 | 313 | 0.0 | 634 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337130 | sp|P34913|HYES_HUMAN | 33.437 | 323 | 190 | 12 | 37 | 346 | 236 | 546 | 2.60e-42 | 157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0220460 | Msa0337130 | 0.904044 | 1.851575e-79 | -8.615850e-47 |
| Msa0337130 | Msa0337150 | 0.804536 | 2.060946e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337130 | MtrunA17_Chr2g0324161 | 97.764 | 313 | 7 | 0 | 35 | 347 | 1 | 313 | 0.0 | 634 |
| Msa0337130 | MtrunA17_Chr2g0324141 | 90.415 | 313 | 30 | 0 | 35 | 347 | 1 | 313 | 0.0 | 587 |
| Msa0337130 | MtrunA17_Chr4g0047681 | 63.462 | 312 | 113 | 1 | 35 | 346 | 1 | 311 | 4.51e-146 | 414 |
| Msa0337130 | MtrunA17_Chr4g0047701 | 60.256 | 312 | 123 | 1 | 35 | 346 | 1 | 311 | 3.98e-142 | 404 |
| Msa0337130 | MtrunA17_Chr7g0272481 | 38.006 | 321 | 185 | 7 | 35 | 344 | 1 | 318 | 1.02e-68 | 218 |
| Msa0337130 | MtrunA17_Chr7g0272531 | 36.890 | 328 | 193 | 7 | 28 | 344 | 24 | 348 | 6.15e-67 | 214 |
| Msa0337130 | MtrunA17_Chr7g0272431 | 37.771 | 323 | 183 | 8 | 35 | 344 | 1 | 318 | 1.71e-66 | 212 |
| Msa0337130 | MtrunA17_Chr7g0272451 | 37.500 | 320 | 185 | 8 | 35 | 344 | 1 | 315 | 2.72e-66 | 211 |
| Msa0337130 | MtrunA17_Chr7g0272181 | 37.383 | 321 | 187 | 7 | 35 | 344 | 1 | 318 | 6.51e-66 | 211 |
| Msa0337130 | MtrunA17_Chr7g0269471 | 37.072 | 321 | 186 | 8 | 35 | 344 | 1 | 316 | 4.45e-65 | 208 |
| Msa0337130 | MtrunA17_Chr7g0272501 | 36.449 | 321 | 190 | 7 | 35 | 344 | 1 | 318 | 2.96e-64 | 206 |
| Msa0337130 | MtrunA17_Chr7g0272171 | 36.137 | 321 | 191 | 7 | 35 | 344 | 1 | 318 | 3.13e-64 | 206 |
| Msa0337130 | MtrunA17_Chr8g0372491 | 34.891 | 321 | 197 | 6 | 35 | 347 | 3 | 319 | 1.23e-63 | 205 |
| Msa0337130 | MtrunA17_Chr4g0000111 | 36.810 | 326 | 185 | 9 | 35 | 344 | 1 | 321 | 3.29e-63 | 204 |
| Msa0337130 | MtrunA17_Chr7g0272441 | 35.514 | 321 | 193 | 7 | 35 | 344 | 1 | 318 | 2.02e-62 | 201 |
| Msa0337130 | MtrunA17_Chr4g0067581 | 34.663 | 326 | 199 | 8 | 30 | 344 | 32 | 354 | 2.20e-59 | 195 |
| Msa0337130 | MtrunA17_Chr7g0272471 | 41.667 | 156 | 87 | 2 | 35 | 186 | 1 | 156 | 4.36e-37 | 131 |
| Msa0337130 | MtrunA17_Chr1g0192291 | 44.186 | 129 | 71 | 1 | 35 | 163 | 1 | 128 | 2.33e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337130 | AT4G02340.1 | 36.677 | 319 | 189 | 7 | 35 | 344 | 1 | 315 | 7.52e-66 | 211 |
| Msa0337130 | AT3G51000.1 | 35.423 | 319 | 195 | 6 | 37 | 346 | 4 | 320 | 9.69e-61 | 197 |
| Msa0337130 | AT3G05600.1 | 36.308 | 325 | 190 | 9 | 35 | 344 | 1 | 323 | 1.62e-60 | 197 |
| Msa0337130 | AT4G15960.1 | 34.012 | 344 | 207 | 11 | 18 | 344 | 33 | 373 | 1.18e-58 | 194 |
| Msa0337130 | AT2G26740.1 | 31.988 | 322 | 202 | 8 | 38 | 344 | 1 | 320 | 6.84e-48 | 164 |
| Msa0337130 | AT2G26750.1 | 31.034 | 319 | 204 | 8 | 38 | 342 | 1 | 317 | 3.51e-46 | 160 |
| Msa0337130 | AT4G15955.3 | 31.579 | 323 | 175 | 10 | 39 | 342 | 6 | 301 | 3.98e-46 | 159 |
| Msa0337130 | AT3G05600.2 | 36.735 | 245 | 143 | 7 | 35 | 269 | 1 | 243 | 1.73e-45 | 155 |
| Msa0337130 | AT4G15955.2 | 36.994 | 173 | 95 | 5 | 39 | 197 | 6 | 178 | 1.19e-29 | 112 |
| Msa0337130 | AT4G15955.1 | 36.970 | 165 | 90 | 5 | 39 | 189 | 6 | 170 | 6.85e-27 | 105 |
| Msa0337130 | AT4G12830.1 | 25.249 | 301 | 166 | 11 | 62 | 347 | 136 | 392 | 9.00e-15 | 75.1 |
Find 108 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCATGTATACCATATTTC+TGG | 0.204004 | 2_4:-56985883 | None:intergenic |
| AGGAAGTTCATCTCAATTAT+TGG | 0.218176 | 2_4:-56988352 | None:intergenic |
| TACATGGATTTCCAGAAATA+TGG | 0.250760 | 2_4:+56985872 | Msa0337130:CDS |
| TTGATGTTAAATCAGTTATA+AGG | 0.281687 | 2_4:+56987335 | Msa0337130:CDS |
| CTGTCTGCATCTGCACATTA+AGG | 0.290921 | 2_4:+56985571 | Msa0337130:five_prime_UTR |
| TGCACAAAATGACTTCCTTC+TGG | 0.292605 | 2_4:-56988030 | None:intergenic |
| TGGCTTCAGATTTGCATTGC+AGG | 0.296497 | 2_4:+56987504 | Msa0337130:CDS |
| GACTATTGTTTCAACTTTCC+TGG | 0.300400 | 2_4:+56987940 | Msa0337130:CDS |
| TGCCACAGGTTTCTTAGAAT+TGG | 0.308943 | 2_4:-56988533 | None:intergenic |
| TGACGAACGTCGTATACTTT+AGG | 0.309840 | 2_4:-56988372 | None:intergenic |
| TCAATTATTGGTTGAGTGAT+TGG | 0.313950 | 2_4:-56988340 | None:intergenic |
| GAGTTGTTGAAATTACTTAT+TGG | 0.316638 | 2_4:-56988241 | None:intergenic |
| CATTTACTTTAGGATCAATT+AGG | 0.317017 | 2_4:-56987888 | None:intergenic |
| AGTGCAGGAACATTTACTTT+AGG | 0.323205 | 2_4:-56987898 | None:intergenic |
| TGTTCCTGCACTGCTGATAA+TGG | 0.329656 | 2_4:+56987909 | Msa0337130:CDS |
| CTAGTAATGTAGAAGCCTTT+TGG | 0.331741 | 2_4:-56987090 | None:intergenic |
| CATGGTGGGAGGGGAGTAGA+TGG | 0.344585 | 2_4:-56987433 | None:intergenic |
| TTACATGTTGGCTGCTGGTT+TGG | 0.345830 | 2_4:+56988510 | Msa0337130:three_prime_UTR |
| AAAGCTGAGTTTAGTCCTTA+AGG | 0.359095 | 2_4:-56988489 | None:intergenic |
| ATGAGCTTGTTCACTTCCTC+TGG | 0.363781 | 2_4:-56988063 | None:intergenic |
| ATCATATACTTTGTTTATCA+AGG | 0.383460 | 2_4:-56988095 | None:intergenic |
| GTGGCTTCTCTCATAACTTT+AGG | 0.388617 | 2_4:+56987018 | Msa0337130:CDS |
| ATGTTCTCCATCTTTGATGC+TGG | 0.393803 | 2_4:-56985686 | None:intergenic |
| TGAGACTTTGATTACCTGTA+TGG | 0.399091 | 2_4:-56987529 | None:intergenic |
| GGGAGGGCAGAAGCAGATTT+CGG | 0.403797 | 2_4:+56987307 | Msa0337130:CDS |
| GGCATTCCTTTCATGAATCC+TGG | 0.405213 | 2_4:+56987039 | Msa0337130:CDS |
| GCCTTTGATTCTAGAGGCTA+TGG | 0.410916 | 2_4:+56985949 | Msa0337130:CDS |
| AAGCTCCATGTAGCTGAGAT+TGG | 0.413032 | 2_4:+56985740 | Msa0337130:CDS |
| GGTATCTGCGACGTTCCTTA+AGG | 0.422854 | 2_4:+56988474 | Msa0337130:three_prime_UTR |
| GTCTCATGCTTAATGTTGTA+TGG | 0.424969 | 2_4:+56988148 | Msa0337130:three_prime_UTR |
| TATGATTGTGATTGTGGTTG+TGG | 0.426626 | 2_4:+56988112 | Msa0337130:exon |
| CAGCTTTACATGTTGGCTGC+TGG | 0.427683 | 2_4:+56988505 | Msa0337130:three_prime_UTR |
| TCTCTATTATTAAGATGTTA+CGG | 0.430494 | 2_4:-56988402 | None:intergenic |
| CATTTGCAACAGCAATCATT+TGG | 0.438176 | 2_4:-56985909 | None:intergenic |
| ATATAAATGATTTCTAAGTC+TGG | 0.443671 | 2_4:-56988006 | None:intergenic |
| ATGATTGCTGTTGCAAATGC+TGG | 0.455512 | 2_4:+56985913 | Msa0337130:CDS |
| GACTAAATCGGTGGTTTGCT+CGG | 0.456829 | 2_4:+56988453 | Msa0337130:three_prime_UTR |
| AGTAAACTAATTCAGGAGCC+TGG | 0.459230 | 2_4:+56987286 | Msa0337130:intron |
| TCTTGATCATCACTTGCTAC+TGG | 0.459301 | 2_4:-56987391 | None:intergenic |
| TTGCATTGCAGGTTCCATAC+AGG | 0.463920 | 2_4:+56987515 | Msa0337130:CDS |
| TTGAAATTACTTATTGGAAA+GGG | 0.470763 | 2_4:-56988235 | None:intergenic |
| TTCATGAGTATAGTGATAAG+AGG | 0.474074 | 2_4:-56988307 | None:intergenic |
| CATGTAGCTGAGATTGGAAC+TGG | 0.474162 | 2_4:+56985746 | Msa0337130:CDS |
| GTTCCTGCACTGCTGATAAT+GGG | 0.482974 | 2_4:+56987910 | Msa0337130:CDS |
| TCAGAGAACCATGGTGGGAG+GGG | 0.492353 | 2_4:-56987442 | None:intergenic |
| AGTAATTTCAACAACTCTGT+AGG | 0.493363 | 2_4:+56988247 | Msa0337130:three_prime_UTR |
| CAGTTCCAATCTCAGCTACA+TGG | 0.495798 | 2_4:-56985745 | None:intergenic |
| CGGATGTAGTCTTCCATGCC+AGG | 0.497187 | 2_4:-56987958 | None:intergenic |
| AATAATAGAGACTAAATTGA+CGG | 0.498112 | 2_4:+56988414 | Msa0337130:three_prime_UTR |
| CAGAACCATCTTCTCCCAAA+AGG | 0.498875 | 2_4:+56987075 | Msa0337130:CDS |
| AAGGCTTCTACATTACTAGA+TGG | 0.502603 | 2_4:+56987094 | Msa0337130:CDS |
| TCAGGCATTCCTCGTTGGTA+AGG | 0.502606 | 2_4:+56986945 | Msa0337130:intron |
| TCACCCATTATCAGCAGTGC+AGG | 0.503679 | 2_4:-56987913 | None:intergenic |
| TTCTGGATTGCAGAAGGACC+AGG | 0.507304 | 2_4:-56987057 | None:intergenic |
| TTGTTTCAACTTTCCTGGCA+TGG | 0.510500 | 2_4:+56987945 | Msa0337130:CDS |
| TTCTATCAGGCATTCCTCGT+TGG | 0.521987 | 2_4:+56986940 | Msa0337130:intron |
| AAATCTGCTTCTGCCCTCCC+AGG | 0.524619 | 2_4:-56987304 | None:intergenic |
| GTTGAAATTACTTATTGGAA+AGG | 0.526398 | 2_4:-56988236 | None:intergenic |
| AAGTGATGATCAAGAAATCA+TGG | 0.529207 | 2_4:+56987399 | Msa0337130:CDS |
| TTCCAGAAATATGGTATACA+TGG | 0.532909 | 2_4:+56985881 | Msa0337130:CDS |
| CTTCTACATTACTAGATGGC+AGG | 0.534185 | 2_4:+56987098 | Msa0337130:CDS |
| CTCAGAGAACCATGGTGGGA+GGG | 0.535598 | 2_4:-56987443 | None:intergenic |
| GCTATTGCCTTTGATTCTAG+AGG | 0.536081 | 2_4:+56985943 | Msa0337130:CDS |
| ACTTCATCCAGCATCAAAGA+TGG | 0.542266 | 2_4:+56985679 | Msa0337130:CDS |
| TCCATAGCCTCTAGAATCAA+AGG | 0.546310 | 2_4:-56985950 | None:intergenic |
| TTCCTCGTTGGTAAGGACTC+TGG | 0.547457 | 2_4:+56986952 | Msa0337130:CDS |
| AAAGTATATGATTGTGATTG+TGG | 0.548979 | 2_4:+56988106 | Msa0337130:exon |
| TCACTTCTACATGACTGTGT+TGG | 0.551579 | 2_4:-56985709 | None:intergenic |
| TGTGTGTGAGGGAGTTATAA+TGG | 0.553539 | 2_4:-56985649 | None:intergenic |
| GTAAACTAATTCAGGAGCCT+GGG | 0.554497 | 2_4:+56987287 | Msa0337130:intron |
| GAAATCATTTATATTCCAGA+AGG | 0.563505 | 2_4:+56988015 | Msa0337130:CDS |
| TGAGCTTGTTCACTTCCTCT+GGG | 0.566276 | 2_4:-56988062 | None:intergenic |
| AGGTCTCTCACAGTGGAAAG+TGG | 0.566949 | 2_4:+56987865 | Msa0337130:intron |
| AAAATAATTTCCATGTGTGC+TGG | 0.579499 | 2_4:+56988171 | Msa0337130:three_prime_UTR |
| CTAAACTCAGCTTTACATGT+TGG | 0.579906 | 2_4:+56988498 | Msa0337130:three_prime_UTR |
| AATTTCCATGTGTGCTGGTG+TGG | 0.581909 | 2_4:+56988176 | Msa0337130:three_prime_UTR |
| AACTAATTCAGGAGCCTGGG+AGG | 0.583125 | 2_4:+56987290 | Msa0337130:intron |
| TCACACCACACCAGCACACA+TGG | 0.586031 | 2_4:-56988181 | None:intergenic |
| GAAGTGTGTGAGTGTGTGTG+AGG | 0.589578 | 2_4:-56985661 | None:intergenic |
| TGGAAGACTACATCCGAAGT+GGG | 0.590452 | 2_4:+56987965 | Msa0337130:CDS |
| GGACCTTGTTGATGAAGTCA+AGG | 0.590593 | 2_4:+56986014 | Msa0337130:CDS |
| ACACAGTCATGTAGAAGTGA+AGG | 0.592451 | 2_4:+56985712 | Msa0337130:CDS |
| AGATGGTTCTGGATTGCAGA+AGG | 0.595396 | 2_4:-56987063 | None:intergenic |
| CCTCAGAGAACCATGGTGGG+AGG | 0.604144 | 2_4:-56987444 | None:intergenic |
| TATACTCTTCTCTAAAACTG+AGG | 0.607017 | 2_4:+56987366 | Msa0337130:CDS |
| GAAGGACCAGGATTCATGAA+AGG | 0.609615 | 2_4:-56987045 | None:intergenic |
| GATTGTGATTGTGGTTGTGG+AGG | 0.611321 | 2_4:+56988115 | Msa0337130:exon |
| ATGGTGGGAGGGGAGTAGAT+GGG | 0.615799 | 2_4:-56987432 | None:intergenic |
| AACTTAAGGGACTAAATCGG+TGG | 0.622282 | 2_4:+56988444 | Msa0337130:three_prime_UTR |
| AAGTGTGTGAGTGTGTGTGA+GGG | 0.630056 | 2_4:-56985660 | None:intergenic |
| ATGGAAGACTACATCCGAAG+TGG | 0.631732 | 2_4:+56987964 | Msa0337130:CDS |
| CCTCCCACCATGGTTCTCTG+AGG | 0.633901 | 2_4:+56987444 | Msa0337130:CDS |
| ACTAATTCAGGAGCCTGGGA+GGG | 0.638834 | 2_4:+56987291 | Msa0337130:intron |
| CATCTACTCCCCTCCCACCA+TGG | 0.640005 | 2_4:+56987434 | Msa0337130:CDS |
| CTTCCTCAGAGAACCATGGT+GGG | 0.642585 | 2_4:-56987447 | None:intergenic |
| AGGTACAAGATTTGCTACAA+AGG | 0.649014 | 2_4:-56986977 | None:intergenic |
| GATCCTTGACTTCATCAACA+AGG | 0.650778 | 2_4:-56986017 | None:intergenic |
| GGCCAATTCTAAGAAACCTG+TGG | 0.655532 | 2_4:+56988531 | Msa0337130:three_prime_UTR |
| CACAGTCATGTAGAAGTGAA+GGG | 0.655684 | 2_4:+56985713 | Msa0337130:CDS |
| TAGAATCAAAGGCAATAGCA+CGG | 0.658163 | 2_4:-56985939 | None:intergenic |
| AGACTACATCCGAAGTGGGG+CGG | 0.665888 | 2_4:+56987969 | Msa0337130:CDS |
| AAGTCTTCCTCAGAGAACCA+TGG | 0.688812 | 2_4:-56987451 | None:intergenic |
| TCTTCCTCAGAGAACCATGG+TGG | 0.694615 | 2_4:-56987448 | None:intergenic |
| GGAAGACTACATCCGAAGTG+GGG | 0.697396 | 2_4:+56987966 | Msa0337130:CDS |
| AGATACATTAGGTATCAACA+AGG | 0.697682 | 2_4:+56986044 | Msa0337130:CDS |
| TCCACACAGGTCTCTCACAG+TGG | 0.707979 | 2_4:+56987858 | Msa0337130:intron |
| CACCAGAGTCCTTACCAACG+AGG | 0.727480 | 2_4:-56986954 | None:intergenic |
| TGTGCATGAACAATTCCCAG+AGG | 0.744075 | 2_4:+56988047 | Msa0337130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAGAATATTTTTTTATATA+AGG | - | chr2_4:56985785-56985804 | None:intergenic | 10.0% |
| !! | GTGATAAAATTTATTTATGT+TGG | - | chr2_4:56986119-56986138 | None:intergenic | 15.0% |
| !! | TTCCTTATAAATATTAAGTT+TGG | + | chr2_4:56987235-56987254 | Msa0337130:intron | 15.0% |
| !!! | AACAATATTTTTGTTTGTGT+AGG | + | chr2_4:56985829-56985848 | Msa0337130:intron | 20.0% |
| !!! | AGAAACTAAGAATTGTTTTA+TGG | + | chr2_4:56986220-56986239 | Msa0337130:intron | 20.0% |
| !! | AAATATTAGTAATGAGTTGT+TGG | + | chr2_4:56986311-56986330 | Msa0337130:intron | 20.0% |
| !!! | AAAACAACACCTATAATTTT+GGG | - | chr2_4:56986634-56986653 | None:intergenic | 20.0% |
| !! | ATAAGCACTTAAAATTGTAT+TGG | - | chr2_4:56986704-56986723 | None:intergenic | 20.0% |
| !!! | TAATAAGACTCTTTTGATTA+AGG | + | chr2_4:56986872-56986891 | Msa0337130:intron | 20.0% |
| !! | GAAGAAGAAATAAATGATTA+TGG | - | chr2_4:56987137-56987156 | None:intergenic | 20.0% |
| !! | CTCCAAACTTAATATTTATA+AGG | - | chr2_4:56987240-56987259 | None:intergenic | 20.0% |
| !! | TTGATGTTAAATCAGTTATA+AGG | + | chr2_4:56987335-56987354 | Msa0337130:CDS | 20.0% |
| !! | ATATTCTGTAAACAATTTGA+TGG | - | chr2_4:56987749-56987768 | None:intergenic | 20.0% |
| !! | ATATAAATGATTTCTAAGTC+TGG | - | chr2_4:56988009-56988028 | None:intergenic | 20.0% |
| !!! | ATCATATACTTTGTTTATCA+AGG | - | chr2_4:56988098-56988117 | None:intergenic | 20.0% |
| !! | TTGAAATTACTTATTGGAAA+GGG | - | chr2_4:56988238-56988257 | None:intergenic | 20.0% |
| !! | TCTCTATTATTAAGATGTTA+CGG | - | chr2_4:56988405-56988424 | None:intergenic | 20.0% |
| !! | AATAATAGAGACTAAATTGA+CGG | + | chr2_4:56988414-56988433 | Msa0337130:three_prime_UTR | 20.0% |
| ! | TAAAGAGAAAAAGTCTACAA+AGG | - | chr2_4:56985627-56985646 | None:intergenic | 25.0% |
| !! | AAGGATCTTTTAGATACATT+AGG | + | chr2_4:56986033-56986052 | Msa0337130:CDS | 25.0% |
| !! | TGAAGTATGTACAGAAATTT+TGG | - | chr2_4:56986141-56986160 | None:intergenic | 25.0% |
| ! | ACTTCAGCTTATATATAATC+AGG | + | chr2_4:56986155-56986174 | Msa0337130:intron | 25.0% |
| ! | ATAAGTGTTAACAGAGATAA+TGG | - | chr2_4:56986583-56986602 | None:intergenic | 25.0% |
| !! | GAAAACAACACCTATAATTT+TGG | - | chr2_4:56986635-56986654 | None:intergenic | 25.0% |
| ! | ATAAAAGTTGAGATTTCAGA+GGG | + | chr2_4:56986668-56986687 | Msa0337130:intron | 25.0% |
| ! | GTTGATTGTAAAATTTGTGT+TGG | + | chr2_4:56986821-56986840 | Msa0337130:intron | 25.0% |
| !!! | CAATTTTAATTGCTTCTATC+AGG | + | chr2_4:56986927-56986946 | Msa0337130:intron | 25.0% |
| !! | GACAAAAAAGTACATATATC+TGG | + | chr2_4:56987181-56987200 | Msa0337130:intron | 25.0% |
| ! | ACTATTGAGTAAACTAATTC+AGG | + | chr2_4:56987279-56987298 | Msa0337130:intron | 25.0% |
| ! | CAACTTAAAATGCTCTTTAA+TGG | + | chr2_4:56987557-56987576 | Msa0337130:intron | 25.0% |
| ! | TTAAAATGCTCTTTAATGGA+TGG | + | chr2_4:56987561-56987580 | Msa0337130:intron | 25.0% |
| !!! | CATTTACTTTAGGATCAATT+AGG | - | chr2_4:56987891-56987910 | None:intergenic | 25.0% |
| ! | GAAATCATTTATATTCCAGA+AGG | + | chr2_4:56988015-56988034 | Msa0337130:CDS | 25.0% |
| ! | AAAGTATATGATTGTGATTG+TGG | + | chr2_4:56988106-56988125 | Msa0337130:exon | 25.0% |
| ! | GTTGAAATTACTTATTGGAA+AGG | - | chr2_4:56988239-56988258 | None:intergenic | 25.0% |
| ! | GAGTTGTTGAAATTACTTAT+TGG | - | chr2_4:56988244-56988263 | None:intergenic | 25.0% |
| !! | TTGACGGATAAAAAAACTTA+AGG | + | chr2_4:56988430-56988449 | Msa0337130:three_prime_UTR | 25.0% |
| !! | TGACGGATAAAAAAACTTAA+GGG | + | chr2_4:56988431-56988450 | Msa0337130:three_prime_UTR | 25.0% |
| ! | AAAAACTTAAGGGACTAAAT+CGG | + | chr2_4:56988441-56988460 | Msa0337130:three_prime_UTR | 25.0% |
| TACATGGATTTCCAGAAATA+TGG | + | chr2_4:56985872-56985891 | Msa0337130:CDS | 30.0% | |
| TTCCAGAAATATGGTATACA+TGG | + | chr2_4:56985881-56985900 | Msa0337130:CDS | 30.0% | |
| ACCAGAAAAAGCAACTATAA+TGG | + | chr2_4:56985993-56986012 | Msa0337130:CDS | 30.0% | |
| !!! | TCCATTATAGTTGCTTTTTC+TGG | - | chr2_4:56985997-56986016 | None:intergenic | 30.0% |
| AGATACATTAGGTATCAACA+AGG | + | chr2_4:56986044-56986063 | Msa0337130:CDS | 30.0% | |
| TATGTTGGAGATACTATACT+AGG | - | chr2_4:56986104-56986123 | None:intergenic | 30.0% | |
| ACACCTTTGATCATAAGTAT+TGG | - | chr2_4:56986350-56986369 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr2_4:56986406-56986425 | Msa0337130:intron | 30.0% | |
| !!! | AACACACCTTTTTTTTTTGG+TGG | - | chr2_4:56986454-56986473 | None:intergenic | 30.0% |
| !!! | CCAAACACACCTTTTTTTTT+TGG | - | chr2_4:56986457-56986476 | None:intergenic | 30.0% |
| ! | CCAAAAAAAAAAGGTGTGTT+TGG | + | chr2_4:56986454-56986473 | Msa0337130:intron | 30.0% |
| !! | CTATAATTTTGGGAGTGATA+GGG | - | chr2_4:56986624-56986643 | None:intergenic | 30.0% |
| !!! | GTGTTGTTTTCCACTAAAAT+CGG | + | chr2_4:56986644-56986663 | Msa0337130:intron | 30.0% |
| !!! | AACTTTTATGCCGATTTTAG+TGG | - | chr2_4:56986657-56986676 | None:intergenic | 30.0% |
| CATAAAAGTTGAGATTTCAG+AGG | + | chr2_4:56986667-56986686 | Msa0337130:intron | 30.0% | |
| ! | CTTATGATCTATGATAGTGT+AGG | + | chr2_4:56986757-56986776 | Msa0337130:intron | 30.0% |
| !!! | AACGTTGTCTGATAGTTTTT+TGG | + | chr2_4:56986899-56986918 | Msa0337130:intron | 30.0% |
| ! | TAGTAATGTAGAAGCCTTTT+GGG | - | chr2_4:56987092-56987111 | None:intergenic | 30.0% |
| ! | GGAAAAAAAGTACGTGTATT+TGG | - | chr2_4:56987219-56987238 | None:intergenic | 30.0% |
| !! | TATACTCTTCTCTAAAACTG+AGG | + | chr2_4:56987366-56987385 | Msa0337130:CDS | 30.0% |
| AAGTGATGATCAAGAAATCA+TGG | + | chr2_4:56987399-56987418 | Msa0337130:CDS | 30.0% | |
| GCATCACTATATGAAAAATC+TGG | + | chr2_4:56987484-56987503 | Msa0337130:CDS | 30.0% | |
| CTGTAAACAATTTGATGGAA+GGG | - | chr2_4:56987744-56987763 | None:intergenic | 30.0% | |
| TCTGTAAACAATTTGATGGA+AGG | - | chr2_4:56987745-56987764 | None:intergenic | 30.0% | |
| AAAATAATTTCCATGTGTGC+TGG | + | chr2_4:56988171-56988190 | Msa0337130:three_prime_UTR | 30.0% | |
| AGTAATTTCAACAACTCTGT+AGG | + | chr2_4:56988247-56988266 | Msa0337130:three_prime_UTR | 30.0% | |
| TTCATGAGTATAGTGATAAG+AGG | - | chr2_4:56988310-56988329 | None:intergenic | 30.0% | |
| ! | TCAATTATTGGTTGAGTGAT+TGG | - | chr2_4:56988343-56988362 | None:intergenic | 30.0% |
| AGGAAGTTCATCTCAATTAT+TGG | - | chr2_4:56988355-56988374 | None:intergenic | 30.0% | |
| ! | AAAGCAGTGGTTTTCATACA+TGG | + | chr2_4:56985856-56985875 | Msa0337130:CDS | 35.0% |
| CTCCATGTATACCATATTTC+TGG | - | chr2_4:56985886-56985905 | None:intergenic | 35.0% | |
| CATTTGCAACAGCAATCATT+TGG | - | chr2_4:56985912-56985931 | None:intergenic | 35.0% | |
| TAGAATCAAAGGCAATAGCA+CGG | - | chr2_4:56985942-56985961 | None:intergenic | 35.0% | |
| TATGGACAAAACTTACCTTC+AGG | + | chr2_4:56986238-56986257 | Msa0337130:intron | 35.0% | |
| GCACCAATACTTATGATCAA+AGG | + | chr2_4:56986344-56986363 | Msa0337130:intron | 35.0% | |
| !!! | TTTTTTTTTTGGTGGTGGTC+GGG | - | chr2_4:56986446-56986465 | None:intergenic | 35.0% |
| !!! | CTTTTTTTTTTGGTGGTGGT+CGG | - | chr2_4:56986447-56986466 | None:intergenic | 35.0% |
| !!! | ACACCTTTTTTTTTTGGTGG+TGG | - | chr2_4:56986451-56986470 | None:intergenic | 35.0% |
| !! | CCTATAATTTTGGGAGTGAT+AGG | - | chr2_4:56986625-56986644 | None:intergenic | 35.0% |
| CCTATCACTCCCAAAATTAT+AGG | + | chr2_4:56986622-56986641 | Msa0337130:intron | 35.0% | |
| ! | TCATAGATCATAAGTGCTGT+AGG | - | chr2_4:56986751-56986770 | None:intergenic | 35.0% |
| !! | AGGTACAAGATTTGCTACAA+AGG | - | chr2_4:56986980-56986999 | None:intergenic | 35.0% |
| ! | CTAGTAATGTAGAAGCCTTT+TGG | - | chr2_4:56987093-56987112 | None:intergenic | 35.0% |
| AAGGCTTCTACATTACTAGA+TGG | + | chr2_4:56987094-56987113 | Msa0337130:CDS | 35.0% | |
| TGAGACTTTGATTACCTGTA+TGG | - | chr2_4:56987532-56987551 | None:intergenic | 35.0% | |
| ! | ACTACGTTTTTCTTTTGGCA+AGG | - | chr2_4:56987620-56987639 | None:intergenic | 35.0% |
| TGCCAAAAGAAAAACGTAGT+TGG | + | chr2_4:56987620-56987639 | Msa0337130:intron | 35.0% | |
| GCCAAAAGAAAAACGTAGTT+GGG | + | chr2_4:56987621-56987640 | Msa0337130:intron | 35.0% | |
| ! | TCCCAACTACGTTTTTCTTT+TGG | - | chr2_4:56987625-56987644 | None:intergenic | 35.0% |
| AAAAGAAAAACGTAGTTGGG+AGG | + | chr2_4:56987624-56987643 | Msa0337130:intron | 35.0% | |
| AAACTGACTAACCACCTTTA+GGG | - | chr2_4:56987658-56987677 | None:intergenic | 35.0% | |
| TAAACTGACTAACCACCTTT+AGG | - | chr2_4:56987659-56987678 | None:intergenic | 35.0% | |
| CCAACGTAAAAATGCATTTG+AGG | - | chr2_4:56987684-56987703 | None:intergenic | 35.0% | |
| ! | CCTCAAATGCATTTTTACGT+TGG | + | chr2_4:56987681-56987700 | Msa0337130:intron | 35.0% |
| ATATACACTGTCAATGTGTG+AGG | - | chr2_4:56987808-56987827 | None:intergenic | 35.0% | |
| ACATTGTTTATGATCCACAC+AGG | + | chr2_4:56987845-56987864 | Msa0337130:intron | 35.0% | |
| AGTGCAGGAACATTTACTTT+AGG | - | chr2_4:56987901-56987920 | None:intergenic | 35.0% | |
| GACTATTGTTTCAACTTTCC+TGG | + | chr2_4:56987940-56987959 | Msa0337130:CDS | 35.0% | |
| TATGATTGTGATTGTGGTTG+TGG | + | chr2_4:56988112-56988131 | Msa0337130:exon | 35.0% | |
| GTCTCATGCTTAATGTTGTA+TGG | + | chr2_4:56988148-56988167 | Msa0337130:three_prime_UTR | 35.0% | |
| AAAGCTGAGTTTAGTCCTTA+AGG | - | chr2_4:56988492-56988511 | None:intergenic | 35.0% | |
| CTAAACTCAGCTTTACATGT+TGG | + | chr2_4:56988498-56988517 | Msa0337130:three_prime_UTR | 35.0% | |
| TGTGTGTGAGGGAGTTATAA+TGG | - | chr2_4:56985652-56985671 | None:intergenic | 40.0% | |
| ACTTCATCCAGCATCAAAGA+TGG | + | chr2_4:56985679-56985698 | Msa0337130:CDS | 40.0% | |
| ATGTTCTCCATCTTTGATGC+TGG | - | chr2_4:56985689-56985708 | None:intergenic | 40.0% | |
| TCACTTCTACATGACTGTGT+TGG | - | chr2_4:56985712-56985731 | None:intergenic | 40.0% | |
| ACACAGTCATGTAGAAGTGA+AGG | + | chr2_4:56985712-56985731 | Msa0337130:CDS | 40.0% | |
| CACAGTCATGTAGAAGTGAA+GGG | + | chr2_4:56985713-56985732 | Msa0337130:CDS | 40.0% | |
| TTGTGTAGGTGAAAAAGCAG+TGG | + | chr2_4:56985843-56985862 | Msa0337130:intron | 40.0% | |
| ! | ATGATTGCTGTTGCAAATGC+TGG | + | chr2_4:56985913-56985932 | Msa0337130:CDS | 40.0% |
| GCTATTGCCTTTGATTCTAG+AGG | + | chr2_4:56985943-56985962 | Msa0337130:CDS | 40.0% | |
| !! | TCCATAGCCTCTAGAATCAA+AGG | - | chr2_4:56985953-56985972 | None:intergenic | 40.0% |
| GATCCTTGACTTCATCAACA+AGG | - | chr2_4:56986020-56986039 | None:intergenic | 40.0% | |
| ! | CTTATGATCAAAGGTGTGTC+TGG | + | chr2_4:56986353-56986372 | Msa0337130:intron | 40.0% |
| ! | TGAGTTTAGCTCAGTTGGTA+TGG | + | chr2_4:56986384-56986403 | Msa0337130:intron | 40.0% |
| CATAAAATATGCAAGGTCCG+AGG | + | chr2_4:56986413-56986432 | Msa0337130:intron | 40.0% | |
| !!! | TTTTTTTTTGGTGGTGGTCG+GGG | - | chr2_4:56986445-56986464 | None:intergenic | 40.0% |
| CGACCACCACCAAAAAAAAA+AGG | + | chr2_4:56986445-56986464 | Msa0337130:intron | 40.0% | |
| CCGACACTAATCAAATGTGT+CGG | - | chr2_4:56986483-56986502 | None:intergenic | 40.0% | |
| CCGACACATTTGATTAGTGT+CGG | + | chr2_4:56986480-56986499 | Msa0337130:intron | 40.0% | |
| TCAGTATGTCAGTGTTTCGT+GGG | + | chr2_4:56986523-56986542 | Msa0337130:intron | 40.0% | |
| GTTGGAAGAAGATAAGTGTG+AGG | + | chr2_4:56986839-56986858 | Msa0337130:intron | 40.0% | |
| !! | ACTTTTTCTGGATAGACAGC+AGG | - | chr2_4:56987000-56987019 | None:intergenic | 40.0% |
| TGCTGTCTATCCAGAAAAAG+TGG | + | chr2_4:56986999-56987018 | Msa0337130:CDS | 40.0% | |
| !!! | ATGAGAGAAGCCACTTTTTC+TGG | - | chr2_4:56987012-56987031 | None:intergenic | 40.0% |
| GTGGCTTCTCTCATAACTTT+AGG | + | chr2_4:56987018-56987037 | Msa0337130:CDS | 40.0% | |
| CTTCTACATTACTAGATGGC+AGG | + | chr2_4:56987098-56987117 | Msa0337130:CDS | 40.0% | |
| AGTAAACTAATTCAGGAGCC+TGG | + | chr2_4:56987286-56987305 | Msa0337130:intron | 40.0% | |
| GTAAACTAATTCAGGAGCCT+GGG | + | chr2_4:56987287-56987306 | Msa0337130:intron | 40.0% | |
| ! | TCTTGATCATCACTTGCTAC+TGG | - | chr2_4:56987394-56987413 | None:intergenic | 40.0% |
| AACTGACTAACCACCTTTAG+GGG | - | chr2_4:56987657-56987676 | None:intergenic | 40.0% | |
| TTGTTTCAACTTTCCTGGCA+TGG | + | chr2_4:56987945-56987964 | Msa0337130:CDS | 40.0% | |
| TGCACAAAATGACTTCCTTC+TGG | - | chr2_4:56988033-56988052 | None:intergenic | 40.0% | |
| TGACGAACGTCGTATACTTT+AGG | - | chr2_4:56988375-56988394 | None:intergenic | 40.0% | |
| AACTTAAGGGACTAAATCGG+TGG | + | chr2_4:56988444-56988463 | Msa0337130:three_prime_UTR | 40.0% | |
| CTGTCTGCATCTGCACATTA+AGG | + | chr2_4:56985571-56985590 | Msa0337130:five_prime_UTR | 45.0% | |
| AAGTGTGTGAGTGTGTGTGA+GGG | - | chr2_4:56985663-56985682 | None:intergenic | 45.0% | |
| AAGCTCCATGTAGCTGAGAT+TGG | + | chr2_4:56985740-56985759 | Msa0337130:CDS | 45.0% | |
| CAGTTCCAATCTCAGCTACA+TGG | - | chr2_4:56985748-56985767 | None:intergenic | 45.0% | |
| CATGTAGCTGAGATTGGAAC+TGG | + | chr2_4:56985746-56985765 | Msa0337130:CDS | 45.0% | |
| ! | GCCTTTGATTCTAGAGGCTA+TGG | + | chr2_4:56985949-56985968 | Msa0337130:CDS | 45.0% |
| !!! | GTTGCTTTTTCTGGTTCTGC+TGG | - | chr2_4:56985988-56986007 | None:intergenic | 45.0% |
| ! | GGACCTTGTTGATGAAGTCA+AGG | + | chr2_4:56986014-56986033 | Msa0337130:CDS | 45.0% |
| AAACAGCGCTATGATCCTGA+AGG | - | chr2_4:56986256-56986275 | None:intergenic | 45.0% | |
| ACTGACACGTCAACATGTGT+CGG | - | chr2_4:56986508-56986527 | None:intergenic | 45.0% | |
| GTCAGTATGTCAGTGTTTCG+TGG | + | chr2_4:56986522-56986541 | Msa0337130:intron | 45.0% | |
| TCGTGGGATAGAAATGCTAG+AGG | + | chr2_4:56986539-56986558 | Msa0337130:intron | 45.0% | |
| CGTGGGATAGAAATGCTAGA+GGG | + | chr2_4:56986540-56986559 | Msa0337130:intron | 45.0% | |
| GTGGGATAGAAATGCTAGAG+GGG | + | chr2_4:56986541-56986560 | Msa0337130:intron | 45.0% | |
| TGGGATAGAAATGCTAGAGG+GGG | + | chr2_4:56986542-56986561 | Msa0337130:intron | 45.0% | |
| TGGGAGTGATAGGGTTGTTT+GGG | - | chr2_4:56986615-56986634 | None:intergenic | 45.0% | |
| TTGGGAGTGATAGGGTTGTT+TGG | - | chr2_4:56986616-56986635 | None:intergenic | 45.0% | |
| TTCTATCAGGCATTCCTCGT+TGG | + | chr2_4:56986940-56986959 | Msa0337130:intron | 45.0% | |
| GGCATTCCTTTCATGAATCC+TGG | + | chr2_4:56987039-56987058 | Msa0337130:CDS | 45.0% | |
| GAAGGACCAGGATTCATGAA+AGG | - | chr2_4:56987048-56987067 | None:intergenic | 45.0% | |
| !! | AGATGGTTCTGGATTGCAGA+AGG | - | chr2_4:56987066-56987085 | None:intergenic | 45.0% |
| !! | CTTTTGGGAGAAGATGGTTC+TGG | - | chr2_4:56987077-56987096 | None:intergenic | 45.0% |
| CAGAACCATCTTCTCCCAAA+AGG | + | chr2_4:56987075-56987094 | Msa0337130:CDS | 45.0% | |
| !! | AGAAGCCTTTTGGGAGAAGA+TGG | - | chr2_4:56987083-56987102 | None:intergenic | 45.0% |
| AAGTCTTCCTCAGAGAACCA+TGG | - | chr2_4:56987454-56987473 | None:intergenic | 45.0% | |
| TGGCTTCAGATTTGCATTGC+AGG | + | chr2_4:56987504-56987523 | Msa0337130:CDS | 45.0% | |
| TTGCATTGCAGGTTCCATAC+AGG | + | chr2_4:56987515-56987534 | Msa0337130:CDS | 45.0% | |
| TGTTCCTGCACTGCTGATAA+TGG | + | chr2_4:56987909-56987928 | Msa0337130:CDS | 45.0% | |
| GTTCCTGCACTGCTGATAAT+GGG | + | chr2_4:56987910-56987929 | Msa0337130:CDS | 45.0% | |
| ATGGAAGACTACATCCGAAG+TGG | + | chr2_4:56987964-56987983 | Msa0337130:CDS | 45.0% | |
| TGGAAGACTACATCCGAAGT+GGG | + | chr2_4:56987965-56987984 | Msa0337130:CDS | 45.0% | |
| ! | AATTTTTCACCGCCCCACTT+CGG | - | chr2_4:56987981-56988000 | None:intergenic | 45.0% |
| TGTGCATGAACAATTCCCAG+AGG | + | chr2_4:56988047-56988066 | Msa0337130:CDS | 45.0% | |
| ! | TGAGCTTGTTCACTTCCTCT+GGG | - | chr2_4:56988065-56988084 | None:intergenic | 45.0% |
| ! | ATGAGCTTGTTCACTTCCTC+TGG | - | chr2_4:56988066-56988085 | None:intergenic | 45.0% |
| GATTGTGATTGTGGTTGTGG+AGG | + | chr2_4:56988115-56988134 | Msa0337130:exon | 45.0% | |
| ! | AATTTCCATGTGTGCTGGTG+TGG | + | chr2_4:56988176-56988195 | Msa0337130:three_prime_UTR | 45.0% |
| !! | GACTAAATCGGTGGTTTGCT+CGG | + | chr2_4:56988453-56988472 | Msa0337130:three_prime_UTR | 45.0% |
| ! | TTACATGTTGGCTGCTGGTT+TGG | + | chr2_4:56988510-56988529 | Msa0337130:three_prime_UTR | 45.0% |
| !!! | AAGAATATTTTTTTATATAA+GGG | - | chr2_4:56985784-56985803 | None:intergenic | 5.0% |
| GAAGTGTGTGAGTGTGTGTG+AGG | - | chr2_4:56985664-56985683 | None:intergenic | 50.0% | |
| CCAACTGAGCTAAACTCACG+AGG | - | chr2_4:56986382-56986401 | None:intergenic | 50.0% | |
| ! | CCTCGTGAGTTTAGCTCAGT+TGG | + | chr2_4:56986379-56986398 | Msa0337130:intron | 50.0% |
| CTGACACGTCAACATGTGTC+GGG | - | chr2_4:56986507-56986526 | None:intergenic | 50.0% | |
| GGAGTGATAGGGTTGTTTGG+GGG | - | chr2_4:56986613-56986632 | None:intergenic | 50.0% | |
| GGGAGTGATAGGGTTGTTTG+GGG | - | chr2_4:56986614-56986633 | None:intergenic | 50.0% | |
| TCAGGCATTCCTCGTTGGTA+AGG | + | chr2_4:56986945-56986964 | Msa0337130:intron | 50.0% | |
| ! | TTCCTCGTTGGTAAGGACTC+TGG | + | chr2_4:56986952-56986971 | Msa0337130:CDS | 50.0% |
| TTCTGGATTGCAGAAGGACC+AGG | - | chr2_4:56987060-56987079 | None:intergenic | 50.0% | |
| AACTAATTCAGGAGCCTGGG+AGG | + | chr2_4:56987290-56987309 | Msa0337130:intron | 50.0% | |
| ACTAATTCAGGAGCCTGGGA+GGG | + | chr2_4:56987291-56987310 | Msa0337130:intron | 50.0% | |
| CTTCCTCAGAGAACCATGGT+GGG | - | chr2_4:56987450-56987469 | None:intergenic | 50.0% | |
| TCTTCCTCAGAGAACCATGG+TGG | - | chr2_4:56987451-56987470 | None:intergenic | 50.0% | |
| AGGTCTCTCACAGTGGAAAG+TGG | + | chr2_4:56987865-56987884 | Msa0337130:intron | 50.0% | |
| TCACCCATTATCAGCAGTGC+AGG | - | chr2_4:56987916-56987935 | None:intergenic | 50.0% | |
| GGAAGACTACATCCGAAGTG+GGG | + | chr2_4:56987966-56987985 | Msa0337130:CDS | 50.0% | |
| GGTATCTGCGACGTTCCTTA+AGG | + | chr2_4:56988474-56988493 | Msa0337130:three_prime_UTR | 50.0% | |
| ! | CAGCTTTACATGTTGGCTGC+TGG | + | chr2_4:56988505-56988524 | Msa0337130:three_prime_UTR | 50.0% |
| CACCAGAGTCCTTACCAACG+AGG | - | chr2_4:56986957-56986976 | None:intergenic | 55.0% | |
| AAATCTGCTTCTGCCCTCCC+AGG | - | chr2_4:56987307-56987326 | None:intergenic | 55.0% | |
| GGGAGGGCAGAAGCAGATTT+CGG | + | chr2_4:56987307-56987326 | Msa0337130:CDS | 55.0% | |
| ! | ATGGTGGGAGGGGAGTAGAT+GGG | - | chr2_4:56987435-56987454 | None:intergenic | 55.0% |
| ! | TCAGAGAACCATGGTGGGAG+GGG | - | chr2_4:56987445-56987464 | None:intergenic | 55.0% |
| ! | CTCAGAGAACCATGGTGGGA+GGG | - | chr2_4:56987446-56987465 | None:intergenic | 55.0% |
| AGGAGAGACTCCCCTAAAGG+TGG | + | chr2_4:56987644-56987663 | Msa0337130:intron | 55.0% | |
| TCCACACAGGTCTCTCACAG+TGG | + | chr2_4:56987858-56987877 | Msa0337130:intron | 55.0% | |
| TCCACTGTGAGAGACCTGTG+TGG | - | chr2_4:56987862-56987881 | None:intergenic | 55.0% | |
| CGGATGTAGTCTTCCATGCC+AGG | - | chr2_4:56987961-56987980 | None:intergenic | 55.0% | |
| AGACTACATCCGAAGTGGGG+CGG | + | chr2_4:56987969-56987988 | Msa0337130:CDS | 55.0% | |
| TCACACCACACCAGCACACA+TGG | - | chr2_4:56988184-56988203 | None:intergenic | 55.0% | |
| GGTGGTCGGGGTTTGAACCT+CGG | - | chr2_4:56986433-56986452 | None:intergenic | 60.0% | |
| ! | CATGGTGGGAGGGGAGTAGA+TGG | - | chr2_4:56987436-56987455 | None:intergenic | 60.0% |
| CATCTACTCCCCTCCCACCA+TGG | + | chr2_4:56987434-56987453 | Msa0337130:CDS | 60.0% | |
| ! | CCTCAGAGAACCATGGTGGG+AGG | - | chr2_4:56987447-56987466 | None:intergenic | 60.0% |
| CCTCCCACCATGGTTCTCTG+AGG | + | chr2_4:56987444-56987463 | Msa0337130:CDS | 60.0% | |
| GGGAGGAGAGACTCCCCTAA+AGG | + | chr2_4:56987641-56987660 | Msa0337130:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 56985564 | 56988553 | 56985564 | ID=Msa0337130;Name=Msa0337130 |
| chr2_4 | mRNA | 56985564 | 56988553 | 56985564 | ID=Msa0337130-mRNA-1;Parent=Msa0337130;Name=Msa0337130-mRNA-1;_AED=0.44;_eAED=0.44;_QI=32|1|1|1|1|1|5|437|347 |
| chr2_4 | exon | 56985564 | 56985767 | 56985564 | ID=Msa0337130-mRNA-1:exon:17347;Parent=Msa0337130-mRNA-1 |
| chr2_4 | exon | 56985851 | 56986065 | 56985851 | ID=Msa0337130-mRNA-1:exon:17348;Parent=Msa0337130-mRNA-1 |
| chr2_4 | exon | 56986949 | 56987119 | 56986949 | ID=Msa0337130-mRNA-1:exon:17349;Parent=Msa0337130-mRNA-1 |
| chr2_4 | exon | 56987301 | 56987536 | 56987301 | ID=Msa0337130-mRNA-1:exon:17350;Parent=Msa0337130-mRNA-1 |
| chr2_4 | exon | 56987867 | 56988553 | 56987867 | ID=Msa0337130-mRNA-1:exon:17351;Parent=Msa0337130-mRNA-1 |
| chr2_4 | five_prime_UTR | 56985564 | 56985595 | 56985564 | ID=Msa0337130-mRNA-1:five_prime_utr;Parent=Msa0337130-mRNA-1 |
| chr2_4 | CDS | 56985596 | 56985767 | 56985596 | ID=Msa0337130-mRNA-1:cds;Parent=Msa0337130-mRNA-1 |
| chr2_4 | CDS | 56985851 | 56986065 | 56985851 | ID=Msa0337130-mRNA-1:cds;Parent=Msa0337130-mRNA-1 |
| chr2_4 | CDS | 56986949 | 56987119 | 56986949 | ID=Msa0337130-mRNA-1:cds;Parent=Msa0337130-mRNA-1 |
| chr2_4 | CDS | 56987301 | 56987536 | 56987301 | ID=Msa0337130-mRNA-1:cds;Parent=Msa0337130-mRNA-1 |
| chr2_4 | CDS | 56987867 | 56988116 | 56987867 | ID=Msa0337130-mRNA-1:cds;Parent=Msa0337130-mRNA-1 |
| chr2_4 | three_prime_UTR | 56988117 | 56988553 | 56988117 | ID=Msa0337130-mRNA-1:three_prime_utr;Parent=Msa0337130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
