Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338230 | AES67387.2 | 90.380 | 395 | 4 | 1 | 1 | 395 | 1 | 361 | 0.0 | 706 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338230 | sp|Q9SK02|RA51B_ARATH | 65.736 | 394 | 101 | 1 | 1 | 394 | 1 | 360 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0338230 | Msa0807320 | 0.800249 | 1.574664e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338230 | MtrunA17_Chr2g0325901 | 89.421 | 397 | 8 | 1 | 1 | 397 | 19 | 381 | 0.0 | 702 |
| Msa0338230 | MtrunA17_Chr4g0062441 | 27.097 | 310 | 157 | 7 | 75 | 370 | 2 | 256 | 1.48e-20 | 90.5 |
| Msa0338230 | MtrunA17_Chr4g0011421 | 26.184 | 359 | 190 | 10 | 27 | 370 | 36 | 334 | 8.82e-20 | 89.7 |
| Msa0338230 | MtrunA17_Chr4g0069901 | 27.645 | 293 | 148 | 8 | 83 | 370 | 103 | 336 | 6.31e-17 | 81.3 |
| Msa0338230 | MtrunA17_Chr4g0030771 | 28.016 | 257 | 156 | 9 | 56 | 299 | 64 | 304 | 1.87e-14 | 73.9 |
| Msa0338230 | MtrunA17_Chr2g0305351 | 36.641 | 131 | 75 | 3 | 91 | 216 | 26 | 153 | 3.92e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338230 | AT2G28560.1 | 65.649 | 393 | 101 | 1 | 1 | 393 | 1 | 359 | 0.0 | 523 |
| Msa0338230 | AT2G28560.6 | 65.736 | 394 | 101 | 1 | 1 | 394 | 1 | 360 | 0.0 | 523 |
| Msa0338230 | AT2G28560.5 | 65.736 | 394 | 101 | 1 | 1 | 394 | 1 | 360 | 0.0 | 523 |
| Msa0338230 | AT2G28560.2 | 65.736 | 394 | 101 | 1 | 1 | 394 | 1 | 360 | 0.0 | 523 |
| Msa0338230 | AT2G28560.3 | 64.917 | 362 | 93 | 1 | 33 | 394 | 1 | 328 | 8.95e-169 | 476 |
| Msa0338230 | AT2G28560.4 | 63.100 | 271 | 66 | 1 | 33 | 303 | 1 | 237 | 4.47e-118 | 343 |
| Msa0338230 | AT5G20850.1 | 26.644 | 289 | 142 | 8 | 91 | 371 | 112 | 338 | 1.73e-17 | 83.6 |
| Msa0338230 | AT1G07745.2 | 31.016 | 187 | 110 | 5 | 58 | 238 | 48 | 221 | 2.85e-16 | 79.3 |
| Msa0338230 | AT1G07745.1 | 31.016 | 187 | 110 | 5 | 58 | 238 | 66 | 239 | 3.84e-16 | 79.3 |
| Msa0338230 | AT1G07745.3 | 32.558 | 172 | 97 | 5 | 58 | 223 | 48 | 206 | 5.06e-16 | 77.0 |
| Msa0338230 | AT1G07745.5 | 32.558 | 172 | 97 | 5 | 58 | 223 | 66 | 224 | 8.86e-16 | 76.6 |
| Msa0338230 | AT1G07745.4 | 32.558 | 172 | 97 | 5 | 58 | 223 | 66 | 224 | 8.86e-16 | 76.6 |
| Msa0338230 | AT2G45280.1 | 26.733 | 303 | 151 | 9 | 83 | 370 | 104 | 350 | 5.84e-15 | 76.3 |
| Msa0338230 | AT2G45280.2 | 25.205 | 365 | 194 | 11 | 21 | 370 | 74 | 374 | 7.09e-15 | 76.3 |
| Msa0338230 | AT5G57450.2 | 25.000 | 348 | 171 | 9 | 65 | 371 | 2 | 300 | 5.17e-14 | 72.8 |
| Msa0338230 | AT5G57450.1 | 25.000 | 348 | 171 | 9 | 65 | 371 | 2 | 300 | 5.17e-14 | 72.8 |
| Msa0338230 | AT5G20850.2 | 27.189 | 217 | 106 | 5 | 89 | 298 | 110 | 281 | 2.56e-13 | 70.9 |
| Msa0338230 | AT3G22880.1 | 25.952 | 289 | 155 | 7 | 84 | 370 | 108 | 339 | 2.92e-12 | 67.8 |
Find 119 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAATGCTCTGTTTAATT+TGG | 0.088862 | 2_4:+58436305 | Msa0338230:three_prime_UTR |
| CAGTGTATAGTGCTTATTTC+TGG | 0.137192 | 2_4:-58435579 | None:intergenic |
| CCTTTCTTGTGAAATATTTC+AGG | 0.176710 | 2_4:-58431847 | None:intergenic |
| ATTATATATATTATTGTTCT+AGG | 0.178529 | 2_4:+58436520 | Msa0338230:three_prime_UTR |
| ATCAATTTCTTGCAGGTAAA+AGG | 0.183476 | 2_4:+58435448 | Msa0338230:intron |
| GCAAATTAATCAACCTGATT+TGG | 0.216253 | 2_4:-58434888 | None:intergenic |
| TAGCATGGCTGCTCTTGTTT+TGG | 0.221576 | 2_4:+58433294 | Msa0338230:CDS |
| CCAAATTAAACAGAGCATTT+TGG | 0.223011 | 2_4:-58436305 | None:intergenic |
| TTGCTGCTTTGGGAATTAAC+TGG | 0.247573 | 2_4:+58434831 | Msa0338230:CDS |
| GCTTCGTTGCCGGTAAATTA+TGG | 0.247855 | 2_4:+58431600 | Msa0338230:CDS |
| TCTCACTGAATTTGAATTGA+TGG | 0.282333 | 2_4:+58430705 | Msa0338230:CDS |
| TGGATTTGGGTAAACCTAAT+TGG | 0.282695 | 2_4:-58430549 | None:intergenic |
| TTCTCATCTCGTTGCTGCTT+TGG | 0.297660 | 2_4:+58434820 | Msa0338230:CDS |
| TCTCATCTCGTTGCTGCTTT+GGG | 0.299868 | 2_4:+58434821 | Msa0338230:CDS |
| CTCATTGCTCGCTTCGTTGC+CGG | 0.306778 | 2_4:+58431590 | Msa0338230:CDS |
| AAAGAAAGCGTATATGGTTT+TGG | 0.312651 | 2_4:+58430469 | None:intergenic |
| AACATGATTGTGGGGCTTCC+AGG | 0.319855 | 2_4:+58434477 | Msa0338230:CDS |
| TTTCCTAGATTGATAGAGAT+TGG | 0.325500 | 2_4:+58431811 | Msa0338230:intron |
| GAAGATGTTAGCGATGGATT+TGG | 0.330903 | 2_4:-58430563 | None:intergenic |
| AACAAACTCATCAACCAATT+AGG | 0.333782 | 2_4:+58430535 | Msa0338230:CDS |
| AATCCAAATTTAGTTCAAAA+AGG | 0.346727 | 2_4:+58431658 | Msa0338230:CDS |
| AGAGGTCGGGCCCTCTGATT+TGG | 0.351367 | 2_4:+58433669 | Msa0338230:CDS |
| AAGATGTTAGCGATGGATTT+GGG | 0.361705 | 2_4:-58430562 | None:intergenic |
| CTTGTACTTGAATCCAAATC+AGG | 0.370679 | 2_4:+58434875 | Msa0338230:CDS |
| ACTTGATTTGTCAATACAAT+TGG | 0.377315 | 2_4:-58434641 | None:intergenic |
| TTGGTTGGTCCACCAGGAAT+TGG | 0.380837 | 2_4:+58431157 | Msa0338230:CDS |
| AGCAGACAAGTTGGTACAAC+TGG | 0.384533 | 2_4:+58436430 | Msa0338230:three_prime_UTR |
| CCTGAAATATTTCACAAGAA+AGG | 0.386589 | 2_4:+58431847 | Msa0338230:CDS |
| TGCTCTGTTTAATTTGGAAA+TGG | 0.388341 | 2_4:+58436311 | Msa0338230:three_prime_UTR |
| CATGTCATATCCCATAGAAT+TGG | 0.390321 | 2_4:-58436369 | None:intergenic |
| TGAGCAACTTCACTTGTTGC+TGG | 0.390545 | 2_4:-58433264 | None:intergenic |
| TCTCTCATGTATTCCTTTCA+AGG | 0.396594 | 2_4:+58434686 | Msa0338230:CDS |
| ATTTGAATTGATGGAGTTGT+TGG | 0.405248 | 2_4:+58430714 | Msa0338230:CDS |
| GGTTAGTTAGTAATTGTCAT+TGG | 0.406755 | 2_4:+58436490 | Msa0338230:three_prime_UTR |
| GTAAATTATGGAGGCTTAGA+TGG | 0.414358 | 2_4:+58431612 | Msa0338230:CDS |
| CCCGATGAAGTAATGTGAAA+AGG | 0.414757 | 2_4:-58435516 | None:intergenic |
| AAGCGAGCAATGAGAGCTTC+AGG | 0.418642 | 2_4:-58431581 | None:intergenic |
| GGCTTCCAGGCAACAAGCAT+TGG | 0.420931 | 2_4:+58434490 | Msa0338230:CDS |
| TCTAAGCCTCCATAATTTAC+CGG | 0.440122 | 2_4:-58431609 | None:intergenic |
| GTTAGTTAGTAATTGTCATT+GGG | 0.443084 | 2_4:+58436491 | Msa0338230:three_prime_UTR |
| TTTGTTCATCATACCTTGAA+AGG | 0.445072 | 2_4:-58434699 | None:intergenic |
| TGCTGCTTTGGGAATTAACT+GGG | 0.446489 | 2_4:+58434832 | Msa0338230:CDS |
| AGGTAAAAGGTTTATTAAGT+TGG | 0.449901 | 2_4:+58435461 | Msa0338230:intron |
| GCTTCCAGGCAACAAGCATT+GGG | 0.458695 | 2_4:+58434491 | Msa0338230:CDS |
| AAACGGTATACCACCGCATA+AGG | 0.466663 | 2_4:-58431119 | None:intergenic |
| GCGGGAAACAATAAGAGAGT+TGG | 0.467974 | 2_4:+58430491 | Msa0338230:five_prime_UTR |
| CGGGAAACAATAAGAGAGTT+GGG | 0.470198 | 2_4:+58430492 | Msa0338230:five_prime_UTR |
| CCGATGAAGTAATGTGAAAA+GGG | 0.481831 | 2_4:-58435515 | None:intergenic |
| CTCCTAGTTGAAGAAAGCCT+TGG | 0.486317 | 2_4:-58433694 | None:intergenic |
| TTGATGGAGTTGTTGGATGT+TGG | 0.490235 | 2_4:+58430721 | Msa0338230:CDS |
| GTACGAAATGAGAGCTTGGC+TGG | 0.492849 | 2_4:+58431061 | Msa0338230:CDS |
| CTATTCAGTGAACATGATTG+TGG | 0.495628 | 2_4:+58434467 | Msa0338230:intron |
| GTGATGTAGGACGTAAGATT+AGG | 0.497815 | 2_4:-58432025 | None:intergenic |
| TCCTAGTTGAAGAAAGCCTT+GGG | 0.497969 | 2_4:-58433693 | None:intergenic |
| CTGTTTAATTTGGAAATGGT+AGG | 0.499079 | 2_4:+58436315 | Msa0338230:three_prime_UTR |
| TATTCAGTGAACATGATTGT+GGG | 0.499165 | 2_4:+58434468 | Msa0338230:intron |
| AACTAGGAGAGTTGAAAAGC+TGG | 0.503044 | 2_4:+58433708 | Msa0338230:CDS |
| ACAGAATTGGTTGGTCCACC+AGG | 0.503962 | 2_4:+58431151 | Msa0338230:CDS |
| CATCTTCCCACTCGACTGAA+AGG | 0.508396 | 2_4:+58431085 | Msa0338230:CDS |
| TTATGCGGTGGTATACCGTT+TGG | 0.512270 | 2_4:+58431121 | Msa0338230:CDS |
| GTTTGGTGTTGTGACAGAAT+TGG | 0.515071 | 2_4:+58431138 | Msa0338230:CDS |
| GCAAATTCAGAAAGTGATGT+AGG | 0.520020 | 2_4:-58432038 | None:intergenic |
| ATCCAACCCTTTCAGTCGAG+TGG | 0.521034 | 2_4:-58431092 | None:intergenic |
| CCAACCCAATGCTTGTTGCC+TGG | 0.521856 | 2_4:-58434495 | None:intergenic |
| AAAAGCTCAGCGACAAACCT+TGG | 0.525078 | 2_4:-58435602 | None:intergenic |
| TGTTTAATTTGGAAATGGTA+GGG | 0.527280 | 2_4:+58436316 | Msa0338230:three_prime_UTR |
| GGCCCTCTGATTTGGACCCA+AGG | 0.530335 | 2_4:+58433677 | Msa0338230:CDS |
| CTTGACATGTCACAGATGGC+TGG | 0.531133 | 2_4:+58431996 | Msa0338230:intron |
| TTTATTTGATAGCATTATTG+GGG | 0.533997 | 2_4:+58433637 | Msa0338230:intron |
| AATTCTGTCACAACACCAAA+CGG | 0.541929 | 2_4:-58431136 | None:intergenic |
| ATCTTCCCACTCGACTGAAA+GGG | 0.544092 | 2_4:+58431086 | Msa0338230:CDS |
| ATGATGGGATAGAGATGAAA+GGG | 0.544919 | 2_4:+58435556 | Msa0338230:CDS |
| CCAGGCAACAAGCATTGGGT+TGG | 0.548971 | 2_4:+58434495 | Msa0338230:CDS |
| ATATCCCATAGAATTGGAAA+AGG | 0.550380 | 2_4:-58436363 | None:intergenic |
| GGAGTTGTTGGATGTTGGAA+TGG | 0.556707 | 2_4:+58430726 | Msa0338230:CDS |
| GGTGTTGTGACAGAATTGGT+TGG | 0.562792 | 2_4:+58431142 | Msa0338230:CDS |
| TCCCACTCGACTGAAAGGGT+TGG | 0.569575 | 2_4:+58431090 | Msa0338230:CDS |
| TAGCGGAGAGGGTACCTTGG+CGG | 0.570079 | 2_4:-58430605 | None:intergenic |
| ACGAGTACGAAATGAGAGCT+TGG | 0.572618 | 2_4:+58431057 | Msa0338230:CDS |
| CACTTTCTGAATTTGCTGAG+AGG | 0.578570 | 2_4:+58432045 | Msa0338230:CDS |
| TCTAGTGAAAGCAGACAAGT+TGG | 0.578766 | 2_4:+58436421 | Msa0338230:three_prime_UTR |
| TGTGAAAAGGGAAAGCCAAA+GGG | 0.579509 | 2_4:-58435503 | None:intergenic |
| AAGCCTTGGGTCCAAATCAG+AGG | 0.580758 | 2_4:-58433680 | None:intergenic |
| ACCCAAGGCTTTCTTCAACT+AGG | 0.581981 | 2_4:+58433692 | Msa0338230:CDS |
| AATATTTCACAAGAAAGGAA+TGG | 0.592975 | 2_4:+58431852 | Msa0338230:CDS |
| TCCAACCCTTTCAGTCGAGT+GGG | 0.593935 | 2_4:-58431091 | None:intergenic |
| CAAGAAAGGAATGGCACAGG+AGG | 0.594332 | 2_4:+58431861 | Msa0338230:CDS |
| GGATTCAAGTACAAGACGGA+TGG | 0.596227 | 2_4:-58434867 | None:intergenic |
| TCACAAGAAAGGAATGGCAC+AGG | 0.600244 | 2_4:+58431858 | Msa0338230:CDS |
| GGAGAGTTGAAAAGCTGGGT+GGG | 0.600338 | 2_4:+58433713 | Msa0338230:CDS |
| GTGAAAAGGGAAAGCCAAAG+GGG | 0.601379 | 2_4:-58435502 | None:intergenic |
| GGGTGGGTTCTGCTGTGATG+AGG | 0.601765 | 2_4:+58433729 | Msa0338230:CDS |
| TCGTTGCCGGTAAATTATGG+AGG | 0.602408 | 2_4:+58431603 | Msa0338230:CDS |
| AATGATGGGATAGAGATGAA+AGG | 0.603753 | 2_4:+58435555 | Msa0338230:CDS |
| AGCGGTGAAGATGTTAGCGA+TGG | 0.604718 | 2_4:-58430569 | None:intergenic |
| ATTCAGTGAACATGATTGTG+GGG | 0.606004 | 2_4:+58434469 | Msa0338230:intron |
| AGATGAGAATCAAACGTCAC+AGG | 0.610188 | 2_4:-58434806 | None:intergenic |
| ACTAGGAGAGTTGAAAAGCT+GGG | 0.614600 | 2_4:+58433709 | Msa0338230:CDS |
| ATGTGAAAAGGGAAAGCCAA+AGG | 0.614607 | 2_4:-58435504 | None:intergenic |
| TTAACACTGCCAGTTTGCAA+CGG | 0.617036 | 2_4:+58433224 | Msa0338230:intron |
| AGCCTTGGGTCCAAATCAGA+GGG | 0.617716 | 2_4:-58433679 | None:intergenic |
| GCAACTTCACTTGTTGCTGG+AGG | 0.622037 | 2_4:-58433261 | None:intergenic |
| GGCAGAAGTAACATTCGCAA+TGG | 0.626263 | 2_4:+58430747 | Msa0338230:CDS |
| TTGGGTTCTGAAACGCAAGA+TGG | 0.631164 | 2_4:+58430510 | Msa0338230:exon |
| AAGTACAAGACGGATGGTCA+CGG | 0.632860 | 2_4:-58434861 | None:intergenic |
| ATAAGCACTATACACTGCCA+AGG | 0.633231 | 2_4:+58435585 | Msa0338230:CDS |
| ACCAGGAATTGGCAAAACAC+AGG | 0.633493 | 2_4:+58431168 | Msa0338230:CDS |
| GTTGCTCATCATTGATAGCA+TGG | 0.636308 | 2_4:+58433279 | Msa0338230:CDS |
| ATTTGGATTCAAGTACAAGA+CGG | 0.641695 | 2_4:-58434871 | None:intergenic |
| AATCAAGTAAGATCTCATGT+TGG | 0.652027 | 2_4:+58434656 | Msa0338230:CDS |
| TCGCAACATCATCACCGCCA+AGG | 0.658528 | 2_4:+58430591 | Msa0338230:CDS |
| TTGGATGAAGCCTTATGCGG+TGG | 0.659036 | 2_4:+58431109 | Msa0338230:CDS |
| AGATTACATACAGTTTGACA+AGG | 0.684734 | 2_4:-58430796 | None:intergenic |
| AGGAGAGTTGAAAAGCTGGG+TGG | 0.686180 | 2_4:+58433712 | Msa0338230:CDS |
| TTACATACAGTTTGACAAGG+AGG | 0.697956 | 2_4:-58430793 | None:intergenic |
| GGGTTGGATGAAGCCTTATG+CGG | 0.698358 | 2_4:+58431106 | Msa0338230:CDS |
| TGAAAAGGGAAAGCCAAAGG+GGG | 0.700823 | 2_4:-58435501 | None:intergenic |
| GGCGGTGATGATGTTGCGAG+CGG | 0.715559 | 2_4:-58430587 | None:intergenic |
| TTATTTGATAGCATTATTGG+GGG | 0.717754 | 2_4:+58433638 | Msa0338230:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGTTTTAAAAAATAACA+AGG | - | chr2_4:58435107-58435126 | None:intergenic | 10.0% |
| !!! | TTTAAAATAAGAATTTAATG+TGG | + | chr2_4:58435189-58435208 | Msa0338230:intron | 10.0% |
| !!! | TTTCATAAAATTTTCAAAAT+TGG | - | chr2_4:58436275-58436294 | None:intergenic | 10.0% |
| !! | GTTATAAGTATTATTTGAAA+AGG | + | chr2_4:58433377-58433396 | Msa0338230:intron | 15.0% |
| !!! | TTTTATTTGATAGCATTATT+GGG | + | chr2_4:58433636-58433655 | Msa0338230:intron | 15.0% |
| !! | TCATAACTAATTCAAAAATT+GGG | + | chr2_4:58434351-58434370 | Msa0338230:intron | 15.0% |
| !! | TAACAATTGATATTAATTTC+TGG | - | chr2_4:58435153-58435172 | None:intergenic | 15.0% |
| !! | TCAATTATACTATTTAACAT+GGG | + | chr2_4:58435331-58435350 | Msa0338230:intron | 15.0% |
| !!! | AAGTTTTATTAAATCAACAA+TGG | + | chr2_4:58435853-58435872 | Msa0338230:intron | 15.0% |
| !!! | AGTTTTATTAAATCAACAAT+GGG | + | chr2_4:58435854-58435873 | Msa0338230:intron | 15.0% |
| !! | TACTTATATTATGAGTTAAA+TGG | - | chr2_4:58435956-58435975 | None:intergenic | 15.0% |
| !! | TTCTGTAAAAAACTATTAAA+TGG | + | chr2_4:58436096-58436115 | Msa0338230:intron | 15.0% |
| !!! | AATCCAAATTTAGTTCAAAA+AGG | + | chr2_4:58431658-58431677 | Msa0338230:CDS | 20.0% |
| !!! | TATATTGATTTTGTGTACAA+TGG | - | chr2_4:58432118-58432137 | None:intergenic | 20.0% |
| !! | AATCATATTTATAGTCAATC+TGG | - | chr2_4:58432586-58432605 | None:intergenic | 20.0% |
| !!! | TCTTAATTCTAAGATTGTAT+CGG | + | chr2_4:58432681-58432700 | Msa0338230:intron | 20.0% |
| !!! | GACCAAAGTTTTAAATTATT+TGG | + | chr2_4:58432936-58432955 | Msa0338230:intron | 20.0% |
| !!! | AGCCAAATAATTTAAAACTT+TGG | - | chr2_4:58432941-58432960 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAAAACCTTAGAC+TGG | + | chr2_4:58433030-58433049 | Msa0338230:intron | 20.0% |
| !! | AAAACTAAAAGAAACACAAT+TGG | - | chr2_4:58433061-58433080 | None:intergenic | 20.0% |
| !! | ACAGTTATCTTATATAAACT+TGG | - | chr2_4:58433191-58433210 | None:intergenic | 20.0% |
| !! | ATAATGCTATCAAATAAAAC+AGG | - | chr2_4:58433635-58433654 | None:intergenic | 20.0% |
| !!! | GTTTTATTTGATAGCATTAT+TGG | + | chr2_4:58433635-58433654 | Msa0338230:intron | 20.0% |
| !!! | TTTATTTGATAGCATTATTG+GGG | + | chr2_4:58433637-58433656 | Msa0338230:intron | 20.0% |
| !! | GTCATAACTAATTCAAAAAT+TGG | + | chr2_4:58434350-58434369 | Msa0338230:intron | 20.0% |
| !!! | TGTTTTAAAAAATAACAAGG+TGG | - | chr2_4:58435104-58435123 | None:intergenic | 20.0% |
| !! | AATAAGAATTTAATGTGGAA+AGG | + | chr2_4:58435194-58435213 | Msa0338230:intron | 20.0% |
| !!! | GTTAAAACTCTTATCAATTT+TGG | + | chr2_4:58435241-58435260 | Msa0338230:intron | 20.0% |
| !! | CTCAATTATACTATTTAACA+TGG | + | chr2_4:58435330-58435349 | Msa0338230:intron | 20.0% |
| !! | TTATATAGTAATTGACACAT+TGG | - | chr2_4:58435379-58435398 | None:intergenic | 20.0% |
| !! | AAGTGAGCTTAAAAATTATT+TGG | + | chr2_4:58435643-58435662 | Msa0338230:intron | 20.0% |
| !!! | TTCTATTTACGCTATTTTTA+TGG | + | chr2_4:58436204-58436223 | Msa0338230:intron | 20.0% |
| !!! | AAATTTTATGAAATACATGC+AGG | + | chr2_4:58436282-58436301 | Msa0338230:intron | 20.0% |
| !!! | CAAAAAAGCGTTACTAAATT+AGG | - | chr2_4:58430663-58430682 | None:intergenic | 25.0% |
| !!! | ACATGTTTGACTTTCATTTT+AGG | + | chr2_4:58430956-58430975 | Msa0338230:intron | 25.0% |
| ! | TCTTGTGATAATAATGTGAT+AGG | + | chr2_4:58431015-58431034 | Msa0338230:intron | 25.0% |
| ! | TTTAACACTTGAAACTTATC+TGG | + | chr2_4:58431212-58431231 | Msa0338230:intron | 25.0% |
| ! | TCAAATAAGTAAATCCAAAC+AGG | + | chr2_4:58431480-58431499 | Msa0338230:intron | 25.0% |
| ! | TCAATAACCATTTATCATGA+TGG | + | chr2_4:58431535-58431554 | Msa0338230:intron | 25.0% |
| ! | CAATAACCATTTATCATGAT+GGG | + | chr2_4:58431536-58431555 | Msa0338230:intron | 25.0% |
| !! | CTACCTTTTTGAACTAAATT+TGG | - | chr2_4:58431664-58431683 | None:intergenic | 25.0% |
| ! | AATATTTCACAAGAAAGGAA+TGG | + | chr2_4:58431852-58431871 | Msa0338230:CDS | 25.0% |
| ! | GAAGTTATGTATAATTGTAG+AGG | + | chr2_4:58432223-58432242 | Msa0338230:intron | 25.0% |
| !! | TAAAGCTTGGATATTTTTCA+TGG | - | chr2_4:58432341-58432360 | None:intergenic | 25.0% |
| ! | TTTCTGCTCTTAAGAAAATA+AGG | + | chr2_4:58432413-58432432 | Msa0338230:intron | 25.0% |
| ! | TATTAACTATTGTAGTCATG+TGG | + | chr2_4:58432464-58432483 | Msa0338230:intron | 25.0% |
| ! | CAAAATATGACATACCATAT+CGG | - | chr2_4:58432533-58432552 | None:intergenic | 25.0% |
| !! | ATTTTGCTTTCATAACAGAA+TGG | + | chr2_4:58432547-58432566 | Msa0338230:intron | 25.0% |
| ! | ACAATCTTAGAATTAAGACT+AGG | - | chr2_4:58432679-58432698 | None:intergenic | 25.0% |
| !! | TTATTTGATAGCATTATTGG+GGG | + | chr2_4:58433638-58433657 | Msa0338230:intron | 25.0% |
| !! | AGAAAGGAATAGTTTGTAAT+TGG | - | chr2_4:58434064-58434083 | None:intergenic | 25.0% |
| ! | GAAATAATGAAATTCAGTCA+TGG | - | chr2_4:58434112-58434131 | None:intergenic | 25.0% |
| ! | TAATCATCTCAACTAATAGT+TGG | + | chr2_4:58434302-58434321 | Msa0338230:intron | 25.0% |
| !!! | ACTTGATTTGTCAATACAAT+TGG | - | chr2_4:58434644-58434663 | None:intergenic | 25.0% |
| !!! | ATTTTCAGATAGCTTTAACT+AGG | + | chr2_4:58434724-58434743 | Msa0338230:intron | 25.0% |
| !!! | TTTTCAGATAGCTTTAACTA+GGG | + | chr2_4:58434725-58434744 | Msa0338230:intron | 25.0% |
| !! | GAATGCATTTAAAATCAAGA+AGG | - | chr2_4:58434925-58434944 | None:intergenic | 25.0% |
| !!! | ATAAGAGTTTTAACCAAGAA+GGG | - | chr2_4:58435235-58435254 | None:intergenic | 25.0% |
| ! | TGCATAACACATTTGAATTT+CGG | + | chr2_4:58435422-58435441 | Msa0338230:intron | 25.0% |
| !!! | ATTGTTTTACTTGACAATGA+TGG | + | chr2_4:58435540-58435559 | Msa0338230:CDS | 25.0% |
| !!! | TTGTTTTACTTGACAATGAT+GGG | + | chr2_4:58435541-58435560 | Msa0338230:CDS | 25.0% |
| ! | TATGTTAAATGTGACAACTA+TGG | + | chr2_4:58435771-58435790 | Msa0338230:intron | 25.0% |
| ! | ATGTTAAATGTGACAACTAT+GGG | + | chr2_4:58435772-58435791 | Msa0338230:intron | 25.0% |
| ! | AACACTTTAATAACTTTGTG+TGG | + | chr2_4:58435825-58435844 | Msa0338230:intron | 25.0% |
| ! | ACACTTTAATAACTTTGTGT+GGG | + | chr2_4:58435826-58435845 | Msa0338230:intron | 25.0% |
| ! | ATTTATGAAATTTCACAGAC+CGG | - | chr2_4:58435903-58435922 | None:intergenic | 25.0% |
| !!! | TGTTTAATTTGGAAATGGTA+GGG | + | chr2_4:58436316-58436335 | Msa0338230:three_prime_UTR | 25.0% |
| ! | AGAAGATGAGCAAAAATTTA+TGG | - | chr2_4:58436404-58436423 | None:intergenic | 25.0% |
| ! | GTTAGTTAGTAATTGTCATT+GGG | + | chr2_4:58436491-58436510 | Msa0338230:three_prime_UTR | 25.0% |
| AACAAACTCATCAACCAATT+AGG | + | chr2_4:58430535-58430554 | Msa0338230:CDS | 30.0% | |
| TCATGGAAAATTGAAGAAAG+GGG | - | chr2_4:58430640-58430659 | None:intergenic | 30.0% | |
| GTCATGGAAAATTGAAGAAA+GGG | - | chr2_4:58430641-58430660 | None:intergenic | 30.0% | |
| !!! | ACGCTTTTTTGAAAATTTGC+AGG | + | chr2_4:58430672-58430691 | Msa0338230:intron | 30.0% |
| TCTCACTGAATTTGAATTGA+TGG | + | chr2_4:58430705-58430724 | Msa0338230:CDS | 30.0% | |
| ATTTGAATTGATGGAGTTGT+TGG | + | chr2_4:58430714-58430733 | Msa0338230:CDS | 30.0% | |
| AGATTACATACAGTTTGACA+AGG | - | chr2_4:58430799-58430818 | None:intergenic | 30.0% | |
| !! | AAAGTCAAACATGTTGACTT+TGG | - | chr2_4:58430950-58430969 | None:intergenic | 30.0% |
| !! | AGCTGTTTTCATAAGTTATC+CGG | + | chr2_4:58431346-58431365 | Msa0338230:intron | 30.0% |
| TAACAACCCATCATGATAAA+TGG | - | chr2_4:58431545-58431564 | None:intergenic | 30.0% | |
| TTTCCTAGATTGATAGAGAT+TGG | + | chr2_4:58431811-58431830 | Msa0338230:intron | 30.0% | |
| CCTTTCTTGTGAAATATTTC+AGG | - | chr2_4:58431850-58431869 | None:intergenic | 30.0% | |
| CCTGAAATATTTCACAAGAA+AGG | + | chr2_4:58431847-58431866 | Msa0338230:CDS | 30.0% | |
| GAAAGACACTGAAAAAGAAA+AGG | - | chr2_4:58431903-58431922 | None:intergenic | 30.0% | |
| TGAGAATTAAGAACTTGACA+AGG | + | chr2_4:58431963-58431982 | Msa0338230:intron | 30.0% | |
| AGAATCAGGTACCATATTAA+TGG | + | chr2_4:58432159-58432178 | Msa0338230:intron | 30.0% | |
| GAATCAGGTACCATATTAAT+GGG | + | chr2_4:58432160-58432179 | Msa0338230:intron | 30.0% | |
| ! | CGTCTTTTAACCCATTAATA+TGG | - | chr2_4:58432173-58432192 | None:intergenic | 30.0% |
| TAATTGTAGAGGAAACTAAG+TGG | + | chr2_4:58432234-58432253 | Msa0338230:intron | 30.0% | |
| !! | TATCCAAGCTTTATTTCAGA+AGG | + | chr2_4:58432348-58432367 | Msa0338230:intron | 30.0% |
| !! | TTTCCTTCTGAAATAAAGCT+TGG | - | chr2_4:58432354-58432373 | None:intergenic | 30.0% |
| GAATTAGTCCTTACAGTATA+AGG | + | chr2_4:58432606-58432625 | Msa0338230:intron | 30.0% | |
| CTTATCTTGGACATTGTTAT+TGG | + | chr2_4:58432706-58432725 | Msa0338230:intron | 30.0% | |
| ! | GTTTTCTTTAACTCAGAAAC+TGG | - | chr2_4:58433457-58433476 | None:intergenic | 30.0% |
| GACATAAAGAAAAATTCTGC+AGG | - | chr2_4:58433583-58433602 | None:intergenic | 30.0% | |
| TCAAATAAAACAGGAGTTGA+AGG | - | chr2_4:58433626-58433645 | None:intergenic | 30.0% | |
| ATGAAAGTTCCAATTGTCAT+GGG | - | chr2_4:58433801-58433820 | None:intergenic | 30.0% | |
| ATGACAATTGGAACTTTCAT+CGG | + | chr2_4:58433801-58433820 | Msa0338230:intron | 30.0% | |
| ATTGAGAAGAAACTTTCTCA+AGG | - | chr2_4:58433923-58433942 | None:intergenic | 30.0% | |
| GTTATTCCTTTACTCTTGAA+GGG | - | chr2_4:58434023-58434042 | None:intergenic | 30.0% | |
| TGTTATTCCTTTACTCTTGA+AGG | - | chr2_4:58434024-58434043 | None:intergenic | 30.0% | |
| AGAGTGTAATCATTATTGCA+GGG | - | chr2_4:58434265-58434284 | None:intergenic | 30.0% | |
| ! | AAGAGTGTAATCATTATTGC+AGG | - | chr2_4:58434266-58434285 | None:intergenic | 30.0% |
| GTCTCATGATGCATATAAAT+TGG | + | chr2_4:58434435-58434454 | Msa0338230:intron | 30.0% | |
| TATTCAGTGAACATGATTGT+GGG | + | chr2_4:58434468-58434487 | Msa0338230:intron | 30.0% | |
| ACTTCATAAAATCTCACAAG+TGG | - | chr2_4:58434546-58434565 | None:intergenic | 30.0% | |
| AATTACATGTTTCTTCCTGA+AGG | + | chr2_4:58434568-58434587 | Msa0338230:intron | 30.0% | |
| AATCAAGTAAGATCTCATGT+TGG | + | chr2_4:58434656-58434675 | Msa0338230:CDS | 30.0% | |
| TTTGTTCATCATACCTTGAA+AGG | - | chr2_4:58434702-58434721 | None:intergenic | 30.0% | |
| ATTTGGATTCAAGTACAAGA+CGG | - | chr2_4:58434874-58434893 | None:intergenic | 30.0% | |
| GCAAATTAATCAACCTGATT+TGG | - | chr2_4:58434891-58434910 | None:intergenic | 30.0% | |
| !! | CTTAATAACAAGTTCTAGAG+CGG | + | chr2_4:58435065-58435084 | Msa0338230:intron | 30.0% |
| !! | GATAAGAGTTTTAACCAAGA+AGG | - | chr2_4:58435236-58435255 | None:intergenic | 30.0% |
| ATCAATTTCTTGCAGGTAAA+AGG | + | chr2_4:58435448-58435467 | Msa0338230:intron | 30.0% | |
| AGATTATAAGCACGAATTCA+CGG | + | chr2_4:58435723-58435742 | Msa0338230:intron | 30.0% | |
| TGTTAAATGTGACAACTATG+GGG | + | chr2_4:58435773-58435792 | Msa0338230:intron | 30.0% | |
| ATTCAATTCAACAGTTGAAC+TGG | + | chr2_4:58436062-58436081 | Msa0338230:intron | 30.0% | |
| AATACTTACACCTAGTGTTA+AGG | + | chr2_4:58436127-58436146 | Msa0338230:intron | 30.0% | |
| ATACTTACACCTAGTGTTAA+GGG | + | chr2_4:58436128-58436147 | Msa0338230:intron | 30.0% | |
| AACAATGACTAAATTACAGG+AGG | - | chr2_4:58436158-58436177 | None:intergenic | 30.0% | |
| TCGAACAATGACTAAATTAC+AGG | - | chr2_4:58436161-58436180 | None:intergenic | 30.0% | |
| !! | CCAAATTAAACAGAGCATTT+TGG | - | chr2_4:58436308-58436327 | None:intergenic | 30.0% |
| CCAAAATGCTCTGTTTAATT+TGG | + | chr2_4:58436305-58436324 | Msa0338230:three_prime_UTR | 30.0% | |
| !! | TGCTCTGTTTAATTTGGAAA+TGG | + | chr2_4:58436311-58436330 | Msa0338230:three_prime_UTR | 30.0% |
| !! | CTGTTTAATTTGGAAATGGT+AGG | + | chr2_4:58436315-58436334 | Msa0338230:three_prime_UTR | 30.0% |
| ATATCCCATAGAATTGGAAA+AGG | - | chr2_4:58436366-58436385 | None:intergenic | 30.0% | |
| ! | GTTTTCTTTCAGATATTCTG+AGG | + | chr2_4:58436469-58436488 | Msa0338230:three_prime_UTR | 30.0% |
| ! | GGTTAGTTAGTAATTGTCAT+TGG | + | chr2_4:58436490-58436509 | Msa0338230:three_prime_UTR | 30.0% |
| TGGATTTGGGTAAACCTAAT+TGG | - | chr2_4:58430552-58430571 | None:intergenic | 35.0% | |
| ! | AAGATGTTAGCGATGGATTT+GGG | - | chr2_4:58430565-58430584 | None:intergenic | 35.0% |
| AAAATTGAAGAAAGGGGGAA+AGG | - | chr2_4:58430634-58430653 | None:intergenic | 35.0% | |
| CATGGAAAATTGAAGAAAGG+GGG | - | chr2_4:58430639-58430658 | None:intergenic | 35.0% | |
| GGTCATGGAAAATTGAAGAA+AGG | - | chr2_4:58430642-58430661 | None:intergenic | 35.0% | |
| AGCGTTACTAAATTAGGTCA+TGG | - | chr2_4:58430657-58430676 | None:intergenic | 35.0% | |
| TTACATACAGTTTGACAAGG+AGG | - | chr2_4:58430796-58430815 | None:intergenic | 35.0% | |
| AATTCTGTCACAACACCAAA+CGG | - | chr2_4:58431139-58431158 | None:intergenic | 35.0% | |
| AACACTTGAAACTTATCTGG+AGG | + | chr2_4:58431215-58431234 | Msa0338230:intron | 35.0% | |
| CTTATTTCCTTAAGCTTGTC+CGG | - | chr2_4:58431368-58431387 | None:intergenic | 35.0% | |
| CAAGCATTACCATAATCCAA+GGG | - | chr2_4:58431506-58431525 | None:intergenic | 35.0% | |
| TCAAGCATTACCATAATCCA+AGG | - | chr2_4:58431507-58431526 | None:intergenic | 35.0% | |
| TCTAAGCCTCCATAATTTAC+CGG | - | chr2_4:58431612-58431631 | None:intergenic | 35.0% | |
| GTAAATTATGGAGGCTTAGA+TGG | + | chr2_4:58431612-58431631 | Msa0338230:CDS | 35.0% | |
| GTTCCAATCTCTATCAATCT+AGG | - | chr2_4:58431817-58431836 | None:intergenic | 35.0% | |
| TTCAGTGTCTTTCATTGTGT+AGG | + | chr2_4:58431910-58431929 | Msa0338230:intron | 35.0% | |
| ! | CTTTCATTGTGTAGGTTTTC+TGG | + | chr2_4:58431918-58431937 | Msa0338230:intron | 35.0% |
| TTTACTTGACATGTCACAGA+TGG | + | chr2_4:58431992-58432011 | Msa0338230:intron | 35.0% | |
| GCAAATTCAGAAAGTGATGT+AGG | - | chr2_4:58432041-58432060 | None:intergenic | 35.0% | |
| GATAGAAAACAAGTTGTCGA+TGG | + | chr2_4:58432440-58432459 | Msa0338230:intron | 35.0% | |
| CTGAATGAGATTTAGGCTAA+AGG | - | chr2_4:58432509-58432528 | None:intergenic | 35.0% | |
| TATCGGTCTGAATGAGATTT+AGG | - | chr2_4:58432516-58432535 | None:intergenic | 35.0% | |
| AAATCTCATTCAGACCGATA+TGG | + | chr2_4:58432516-58432535 | Msa0338230:intron | 35.0% | |
| AGTCCTTACAGTATAAGGTT+TGG | + | chr2_4:58432611-58432630 | Msa0338230:intron | 35.0% | |
| GTCCTTACAGTATAAGGTTT+GGG | + | chr2_4:58432612-58432631 | Msa0338230:intron | 35.0% | |
| TTCCCAAACCTTATACTGTA+AGG | - | chr2_4:58432617-58432636 | None:intergenic | 35.0% | |
| TATAAGGTTTGGGAAATCCT+CGG | + | chr2_4:58432622-58432641 | Msa0338230:intron | 35.0% | |
| GAGCGTAGACAAAATATTAG+TGG | - | chr2_4:58432733-58432752 | None:intergenic | 35.0% | |
| GTTTGCATTCTTTCAGACTA+GGG | - | chr2_4:58432889-58432908 | None:intergenic | 35.0% | |
| GTTGATCAGTAGTTAAGAAG+TGG | + | chr2_4:58432909-58432928 | Msa0338230:intron | 35.0% | |
| TGATGTTGAGGTCTAAATTG+CGG | + | chr2_4:58432999-58433018 | Msa0338230:intron | 35.0% | |
| ATGAGAAAGCAGAGCAAAAT+AGG | - | chr2_4:58433167-58433186 | None:intergenic | 35.0% | |
| ATCACATACACCATCCTAAT+TGG | - | chr2_4:58433411-58433430 | None:intergenic | 35.0% | |
| TGGTGTATGTGATGAGAAAT+AGG | + | chr2_4:58433418-58433437 | Msa0338230:intron | 35.0% | |
| !! | AATTCGAGGTGTTGATCAAA+TGG | - | chr2_4:58433558-58433577 | None:intergenic | 35.0% |
| GATGAAAGTTCCAATTGTCA+TGG | - | chr2_4:58433802-58433821 | None:intergenic | 35.0% | |
| TGACAATTGGAACTTTCATC+GGG | + | chr2_4:58433802-58433821 | Msa0338230:intron | 35.0% | |
| CTTCGGAAATACTCAATACT+TGG | + | chr2_4:58433848-58433867 | Msa0338230:intron | 35.0% | |
| TTTACTTCCTCGACCTTAAA+AGG | + | chr2_4:58433985-58434004 | Msa0338230:intron | 35.0% | |
| ! | GACTACTACGTTTCCTTTTA+AGG | - | chr2_4:58434001-58434020 | None:intergenic | 35.0% |
| GTTTGTAATTGGATGAGCAT+TGG | - | chr2_4:58434053-58434072 | None:intergenic | 35.0% | |
| ACATTATGTTGGAAGCAGAA+AGG | - | chr2_4:58434080-58434099 | None:intergenic | 35.0% | |
| GGTAAAGATGCACATTATGT+TGG | - | chr2_4:58434091-58434110 | None:intergenic | 35.0% | |
| TTCTTCATGGCATCATCAAT+TGG | + | chr2_4:58434153-58434172 | Msa0338230:intron | 35.0% | |
| TCTTCATGGCATCATCAATT+GGG | + | chr2_4:58434154-58434173 | Msa0338230:intron | 35.0% | |
| TCAGGTCTATTGAATACCAA+GGG | - | chr2_4:58434239-58434258 | None:intergenic | 35.0% | |
| TTCAGGTCTATTGAATACCA+AGG | - | chr2_4:58434240-58434259 | None:intergenic | 35.0% | |
| CATCTCAACTAATAGTTGGT+TGG | + | chr2_4:58434306-58434325 | Msa0338230:intron | 35.0% | |
| CATCATGAGACATTATGAGT+AGG | - | chr2_4:58434426-58434445 | None:intergenic | 35.0% | |
| CTATTCAGTGAACATGATTG+TGG | + | chr2_4:58434467-58434486 | Msa0338230:intron | 35.0% | |
| ATTCAGTGAACATGATTGTG+GGG | + | chr2_4:58434469-58434488 | Msa0338230:intron | 35.0% | |
| TCAAAATCAGAACTTCCTTC+AGG | - | chr2_4:58434586-58434605 | None:intergenic | 35.0% | |
| ! | TTCTGATTTTGAACCAGTTC+AGG | + | chr2_4:58434594-58434613 | Msa0338230:intron | 35.0% |
| TCTCTCATGTATTCCTTTCA+AGG | + | chr2_4:58434686-58434705 | Msa0338230:CDS | 35.0% | |
| ACTAGGGTTTAACATATCAC+TGG | + | chr2_4:58434741-58434760 | Msa0338230:intron | 35.0% | |
| CTAGGGTTTAACATATCACT+GGG | + | chr2_4:58434742-58434761 | Msa0338230:intron | 35.0% | |
| ! | GAATGTCTTCTTTTGTAGAG+CGG | - | chr2_4:58434787-58434806 | None:intergenic | 35.0% |
| CTTGTACTTGAATCCAAATC+AGG | + | chr2_4:58434875-58434894 | Msa0338230:CDS | 35.0% | |
| ! | TGCCATTTGACTCAAATAGT+TGG | + | chr2_4:58434967-58434986 | Msa0338230:intron | 35.0% |
| CTCCAACTATTTGAGTCAAA+TGG | - | chr2_4:58434972-58434991 | None:intergenic | 35.0% | |
| TTTGACTCAAATAGTTGGAG+TGG | + | chr2_4:58434972-58434991 | Msa0338230:intron | 35.0% | |
| TTGACTCAAATAGTTGGAGT+GGG | + | chr2_4:58434973-58434992 | Msa0338230:intron | 35.0% | |
| TTAACAAATGTCTCCCTTCT+TGG | + | chr2_4:58435219-58435238 | Msa0338230:intron | 35.0% | |
| ! | AGTTACACCTGAGTGTTTTT+AGG | - | chr2_4:58435286-58435305 | None:intergenic | 35.0% |
| ! | TTGGCATTTTGCAGAATACT+AGG | - | chr2_4:58435360-58435379 | None:intergenic | 35.0% |
| CCGATGAAGTAATGTGAAAA+GGG | - | chr2_4:58435518-58435537 | None:intergenic | 35.0% | |
| ! | CCCTTTTCACATTACTTCAT+CGG | + | chr2_4:58435515-58435534 | Msa0338230:CDS | 35.0% |
| ! | CCTTTTCACATTACTTCATC+GGG | + | chr2_4:58435516-58435535 | Msa0338230:CDS | 35.0% |
| ! | CTTTTCACATTACTTCATCG+GGG | + | chr2_4:58435517-58435536 | Msa0338230:CDS | 35.0% |
| ! | AATGATGGGATAGAGATGAA+AGG | + | chr2_4:58435555-58435574 | Msa0338230:CDS | 35.0% |
| ! | ATGATGGGATAGAGATGAAA+GGG | + | chr2_4:58435556-58435575 | Msa0338230:CDS | 35.0% |
| CAGTGTATAGTGCTTATTTC+TGG | - | chr2_4:58435582-58435601 | None:intergenic | 35.0% | |
| TAAAGTCATAGCGTATGTAG+TGG | + | chr2_4:58435671-58435690 | Msa0338230:intron | 35.0% | |
| AAAGTCATAGCGTATGTAGT+GGG | + | chr2_4:58435672-58435691 | Msa0338230:intron | 35.0% | |
| !! | CGGAGAAAAAGTACTTAATC+TGG | + | chr2_4:58435743-58435762 | Msa0338230:intron | 35.0% |
| AAAGTTCCAAGAAGTAGATC+CGG | + | chr2_4:58435881-58435900 | Msa0338230:intron | 35.0% | |
| ! | TACGCCTTTTCCAATTCTAT+GGG | + | chr2_4:58436359-58436378 | Msa0338230:three_prime_UTR | 35.0% |
| CATGTCATATCCCATAGAAT+TGG | - | chr2_4:58436372-58436391 | None:intergenic | 35.0% | |
| CGGGAAACAATAAGAGAGTT+GGG | + | chr2_4:58430492-58430511 | Msa0338230:five_prime_UTR | 40.0% | |
| ! | GAAGATGTTAGCGATGGATT+TGG | - | chr2_4:58430566-58430585 | None:intergenic | 40.0% |
| TTGATGGAGTTGTTGGATGT+TGG | + | chr2_4:58430721-58430740 | Msa0338230:CDS | 40.0% | |
| TTGAATGCAATCACGTGTGT+CGG | - | chr2_4:58430897-58430916 | None:intergenic | 40.0% | |
| !! | GTTTGGTGTTGTGACAGAAT+TGG | + | chr2_4:58431138-58431157 | Msa0338230:CDS | 40.0% |
| GCAAAACACAGGTGAGTTAT+TGG | + | chr2_4:58431179-58431198 | Msa0338230:intron | 40.0% | |
| ! | TTATCTGGAGGCTTTTCTGA+TGG | + | chr2_4:58431227-58431246 | Msa0338230:intron | 40.0% |
| !!! | GCTTTTCTGATGGTCTTGTT+TGG | + | chr2_4:58431237-58431256 | Msa0338230:intron | 40.0% |
| AAGTTATCCGGACAAGCTTA+AGG | + | chr2_4:58431358-58431377 | Msa0338230:intron | 40.0% | |
| GTGATGTAGGACGTAAGATT+AGG | - | chr2_4:58432028-58432047 | None:intergenic | 40.0% | |
| !! | CACTTTCTGAATTTGCTGAG+AGG | + | chr2_4:58432045-58432064 | Msa0338230:CDS | 40.0% |
| AGAGGAAACTAAGTGGTCTT+TGG | + | chr2_4:58432241-58432260 | Msa0338230:intron | 40.0% | |
| GAAAGCAAGGTAAATTACCG+AGG | - | chr2_4:58432642-58432661 | None:intergenic | 40.0% | |
| CGGTAATTTACCTTGCTTTC+CGG | + | chr2_4:58432642-58432661 | Msa0338230:intron | 40.0% | |
| GGTAATTTACCTTGCTTTCC+GGG | + | chr2_4:58432643-58432662 | Msa0338230:intron | 40.0% | |
| GATTGTATCGGAGCTTATCT+TGG | + | chr2_4:58432693-58432712 | Msa0338230:intron | 40.0% | |
| CGTTTGCATTCTTTCAGACT+AGG | - | chr2_4:58432890-58432909 | None:intergenic | 40.0% | |
| TCAGTAGTTAAGAAGTGGAC+TGG | + | chr2_4:58432914-58432933 | Msa0338230:intron | 40.0% | |
| CAATTGGCATATCCAGTCTA+AGG | - | chr2_4:58433045-58433064 | None:intergenic | 40.0% | |
| TTAACACTGCCAGTTTGCAA+CGG | + | chr2_4:58433224-58433243 | Msa0338230:intron | 40.0% | |
| TACTTTGATCCGTTGCAAAC+TGG | - | chr2_4:58433236-58433255 | None:intergenic | 40.0% | |
| ! | GTTGCTCATCATTGATAGCA+TGG | + | chr2_4:58433279-58433298 | Msa0338230:CDS | 40.0% |
| ! | TTGGGGTGAGCTAAACTTTT+TGG | + | chr2_4:58433313-58433332 | Msa0338230:intron | 40.0% |
| AAAAGGAGCTACGTCCAATT+AGG | + | chr2_4:58433394-58433413 | Msa0338230:intron | 40.0% | |
| GATCAAATGGCTTCATTCAC+CGG | - | chr2_4:58433545-58433564 | None:intergenic | 40.0% | |
| TCCTAGTTGAAGAAAGCCTT+GGG | - | chr2_4:58433696-58433715 | None:intergenic | 40.0% | |
| AACTAGGAGAGTTGAAAAGC+TGG | + | chr2_4:58433708-58433727 | Msa0338230:CDS | 40.0% | |
| ACTAGGAGAGTTGAAAAGCT+GGG | + | chr2_4:58433709-58433728 | Msa0338230:CDS | 40.0% | |
| GACAATTGGAACTTTCATCG+GGG | + | chr2_4:58433803-58433822 | Msa0338230:intron | 40.0% | |
| ACAATTGGAACTTTCATCGG+GGG | + | chr2_4:58433804-58433823 | Msa0338230:intron | 40.0% | |
| !! | GGTTTTTGGATGTAAAGCTG+CGG | + | chr2_4:58433825-58433844 | Msa0338230:intron | 40.0% |
| CAAGCAAACAACCATAGGAA+AGG | - | chr2_4:58433881-58433900 | None:intergenic | 40.0% | |
| AGAGACAAGCAAACAACCAT+AGG | - | chr2_4:58433886-58433905 | None:intergenic | 40.0% | |
| TTGTTTGCTTGTCTCTCAAC+TGG | + | chr2_4:58433890-58433909 | Msa0338230:intron | 40.0% | |
| AGGAAGTAAATCAGCTGACA+CGG | - | chr2_4:58433975-58433994 | None:intergenic | 40.0% | |
| !!! | TACGTTTCCTTTTAAGGTCG+AGG | - | chr2_4:58433995-58434014 | None:intergenic | 40.0% |
| AGTAGTCCCTTCAAGAGTAA+AGG | + | chr2_4:58434014-58434033 | Msa0338230:intron | 40.0% | |
| TACTTCTGCACTAACCTAGA+TGG | - | chr2_4:58434201-58434220 | None:intergenic | 40.0% | |
| ATCATTATTGCAGGGAGTTC+AGG | - | chr2_4:58434257-58434276 | None:intergenic | 40.0% | |
| ATAAGCCGCAACATCCAATT+AGG | - | chr2_4:58434386-58434405 | None:intergenic | 40.0% | |
| AGATGAGAATCAAACGTCAC+AGG | - | chr2_4:58434809-58434828 | None:intergenic | 40.0% | |
| !! | TTGCTGCTTTGGGAATTAAC+TGG | + | chr2_4:58434831-58434850 | Msa0338230:CDS | 40.0% |
| !! | TGCTGCTTTGGGAATTAACT+GGG | + | chr2_4:58434832-58434851 | Msa0338230:CDS | 40.0% |
| !! | AATAACAAGTTCTAGAGCGG+TGG | + | chr2_4:58435068-58435087 | Msa0338230:intron | 40.0% |
| TAGCCAACCTAAAAACACTC+AGG | + | chr2_4:58435276-58435295 | Msa0338230:intron | 40.0% | |
| !!! | ACACCTGAGTGTTTTTAGGT+TGG | - | chr2_4:58435282-58435301 | None:intergenic | 40.0% |
| TCGGATGATCAATTTCTTGC+AGG | + | chr2_4:58435441-58435460 | Msa0338230:intron | 40.0% | |
| TGTGAAAAGGGAAAGCCAAA+GGG | - | chr2_4:58435506-58435525 | None:intergenic | 40.0% | |
| ATGTGAAAAGGGAAAGCCAA+AGG | - | chr2_4:58435507-58435526 | None:intergenic | 40.0% | |
| CCCGATGAAGTAATGTGAAA+AGG | - | chr2_4:58435519-58435538 | None:intergenic | 40.0% | |
| ATAAGCACTATACACTGCCA+AGG | + | chr2_4:58435585-58435604 | Msa0338230:CDS | 40.0% | |
| ! | GTACGCCTTTTCCAATTCTA+TGG | + | chr2_4:58436358-58436377 | Msa0338230:three_prime_UTR | 40.0% |
| TCTAGTGAAAGCAGACAAGT+TGG | + | chr2_4:58436421-58436440 | Msa0338230:three_prime_UTR | 40.0% | |
| GCGGGAAACAATAAGAGAGT+TGG | + | chr2_4:58430491-58430510 | Msa0338230:five_prime_UTR | 45.0% | |
| !! | TTGGGTTCTGAAACGCAAGA+TGG | + | chr2_4:58430510-58430529 | Msa0338230:exon | 45.0% |
| GAAAGGGGGAAAGGAAATAG+CGG | - | chr2_4:58430625-58430644 | None:intergenic | 45.0% | |
| GGAGTTGTTGGATGTTGGAA+TGG | + | chr2_4:58430726-58430745 | Msa0338230:CDS | 45.0% | |
| GGCAGAAGTAACATTCGCAA+TGG | + | chr2_4:58430747-58430766 | Msa0338230:CDS | 45.0% | |
| ! | ACGCCTTCAATCAGAAGTGT+CGG | - | chr2_4:58430845-58430864 | None:intergenic | 45.0% |
| !!! | GTGATAGGCGTTGCTTTTGA+TGG | + | chr2_4:58431030-58431049 | Msa0338230:intron | 45.0% |
| ACGAGTACGAAATGAGAGCT+TGG | + | chr2_4:58431057-58431076 | Msa0338230:CDS | 45.0% | |
| ATCTTCCCACTCGACTGAAA+GGG | + | chr2_4:58431086-58431105 | Msa0338230:CDS | 45.0% | |
| AAACGGTATACCACCGCATA+AGG | - | chr2_4:58431122-58431141 | None:intergenic | 45.0% | |
| TTATGCGGTGGTATACCGTT+TGG | + | chr2_4:58431121-58431140 | Msa0338230:CDS | 45.0% | |
| ! | GGTGTTGTGACAGAATTGGT+TGG | + | chr2_4:58431142-58431161 | Msa0338230:CDS | 45.0% |
| ! | TGTGTTTTGCCAATTCCTGG+TGG | - | chr2_4:58431169-58431188 | None:intergenic | 45.0% |
| ACCAGGAATTGGCAAAACAC+AGG | + | chr2_4:58431168-58431187 | Msa0338230:CDS | 45.0% | |
| ! | ACCTGTGTTTTGCCAATTCC+TGG | - | chr2_4:58431172-58431191 | None:intergenic | 45.0% |
| AGTAAATCCAAACAGGCCCT+TGG | + | chr2_4:58431487-58431506 | Msa0338230:intron | 45.0% | |
| GCTTCGTTGCCGGTAAATTA+TGG | + | chr2_4:58431600-58431619 | Msa0338230:CDS | 45.0% | |
| TCGTTGCCGGTAAATTATGG+AGG | + | chr2_4:58431603-58431622 | Msa0338230:CDS | 45.0% | |
| CGCTCAAAGCAACAATGCAA+TGG | - | chr2_4:58431700-58431719 | None:intergenic | 45.0% | |
| TCACAAGAAAGGAATGGCAC+AGG | + | chr2_4:58431858-58431877 | Msa0338230:CDS | 45.0% | |
| ATGGTACCTGATTCTCGTGT+AGG | - | chr2_4:58432154-58432173 | None:intergenic | 45.0% | |
| TAGTGAATCGCGGCAAATAG+CGG | - | chr2_4:58432296-58432315 | None:intergenic | 45.0% | |
| ! | CTGGGTATCTAGAGCATTAG+AGG | - | chr2_4:58432795-58432814 | None:intergenic | 45.0% |
| ! | ATGCTCTAGATACCCAGTTC+TGG | + | chr2_4:58432798-58432817 | Msa0338230:intron | 45.0% |
| ! | TGCTCTAGATACCCAGTTCT+GGG | + | chr2_4:58432799-58432818 | Msa0338230:intron | 45.0% |
| CTTTCAGACTAGGGACAAGA+TGG | - | chr2_4:58432880-58432899 | None:intergenic | 45.0% | |
| ATGCTGTGTCTTCGTAACCA+CGG | - | chr2_4:58432977-58432996 | None:intergenic | 45.0% | |
| GACACAGCATCTTGATGTTG+AGG | + | chr2_4:58432987-58433006 | Msa0338230:intron | 45.0% | |
| ! | TGAGCAACTTCACTTGTTGC+TGG | - | chr2_4:58433267-58433286 | None:intergenic | 45.0% |
| !! | TAGCATGGCTGCTCTTGTTT+TGG | + | chr2_4:58433294-58433313 | Msa0338230:CDS | 45.0% |
| !!! | AGCATGGCTGCTCTTGTTTT+GGG | + | chr2_4:58433295-58433314 | Msa0338230:CDS | 45.0% |
| GATGAGAAATAGGAGAGCAG+AGG | + | chr2_4:58433428-58433447 | Msa0338230:intron | 45.0% | |
| GAACAACTAACCAACAGTGC+TGG | + | chr2_4:58433492-58433511 | Msa0338230:intron | 45.0% | |
| ! | TCTCAACTAGTCTCCCAATC+CGG | + | chr2_4:58433523-58433542 | Msa0338230:intron | 45.0% |
| ATGGCTTCATTCACCGGATT+GGG | - | chr2_4:58433539-58433558 | None:intergenic | 45.0% | |
| AATGGCTTCATTCACCGGAT+TGG | - | chr2_4:58433540-58433559 | None:intergenic | 45.0% | |
| AAATTCTGCAGGCGAATTCG+AGG | - | chr2_4:58433572-58433591 | None:intergenic | 45.0% | |
| ! | GAAGGCACAATTCGTAGAAG+TGG | - | chr2_4:58433608-58433627 | None:intergenic | 45.0% |
| ATAGCATTATTGGGGGCAGA+CGG | + | chr2_4:58433645-58433664 | Msa0338230:intron | 45.0% | |
| ACCCAAGGCTTTCTTCAACT+AGG | + | chr2_4:58433692-58433711 | Msa0338230:CDS | 45.0% | |
| CTCCTAGTTGAAGAAAGCCT+TGG | - | chr2_4:58433697-58433716 | None:intergenic | 45.0% | |
| CTGATAAGGCCCATGACAAT+TGG | + | chr2_4:58433789-58433808 | Msa0338230:intron | 45.0% | |
| ! | GAACTTTCATCGGGGGTTTT+TGG | + | chr2_4:58433811-58433830 | Msa0338230:intron | 45.0% |
| TTGGTCTCACTCCTTTCCTA+TGG | + | chr2_4:58433867-58433886 | Msa0338230:intron | 45.0% | |
| GCAGCAAAGAGATGAGTTGT+TGG | - | chr2_4:58433950-58433969 | None:intergenic | 45.0% | |
| ATGCCATGAAGAACCATGGA+GGG | - | chr2_4:58434146-58434165 | None:intergenic | 45.0% | |
| GATGATGCCATGAAGAACCA+TGG | - | chr2_4:58434150-58434169 | None:intergenic | 45.0% | |
| ATGGCATCATCAATTGGGTG+AGG | + | chr2_4:58434159-58434178 | Msa0338230:intron | 45.0% | |
| CTTCGTCATCTCTTCCATCT+AGG | + | chr2_4:58434184-58434203 | Msa0338230:intron | 45.0% | |
| ACAGTGAACAGTAGAACCCT+TGG | + | chr2_4:58434220-58434239 | Msa0338230:intron | 45.0% | |
| ! | ACACTCTTCTTTTCCCTGCT+CGG | + | chr2_4:58434278-58434297 | Msa0338230:intron | 45.0% |
| ! | TTGAGATGATTAGCCGAGCA+GGG | - | chr2_4:58434294-58434313 | None:intergenic | 45.0% |
| CAACATCCAATTAGGAGGGA+GGG | - | chr2_4:58434378-58434397 | None:intergenic | 45.0% | |
| TCCCTCCTAATTGGATGTTG+CGG | + | chr2_4:58434378-58434397 | Msa0338230:intron | 45.0% | |
| ATTCAGCAAGTGACCTGAAC+TGG | - | chr2_4:58434610-58434629 | None:intergenic | 45.0% | |
| ! | TTCTCATCTCGTTGCTGCTT+TGG | + | chr2_4:58434820-58434839 | Msa0338230:CDS | 45.0% |
| !! | TCTCATCTCGTTGCTGCTTT+GGG | + | chr2_4:58434821-58434840 | Msa0338230:CDS | 45.0% |
| AAGTACAAGACGGATGGTCA+CGG | - | chr2_4:58434864-58434883 | None:intergenic | 45.0% | |
| GGATTCAAGTACAAGACGGA+TGG | - | chr2_4:58434870-58434889 | None:intergenic | 45.0% | |
| ACTCAAATAGTTGGAGTGGG+TGG | + | chr2_4:58434976-58434995 | Msa0338230:intron | 45.0% | |
| TGAAAAGGGAAAGCCAAAGG+GGG | - | chr2_4:58435504-58435523 | None:intergenic | 45.0% | |
| GTGAAAAGGGAAAGCCAAAG+GGG | - | chr2_4:58435505-58435524 | None:intergenic | 45.0% | |
| AAAAGCTCAGCGACAAACCT+TGG | - | chr2_4:58435605-58435624 | None:intergenic | 45.0% | |
| !!! | CGCTGAGCTTTTTTGCTGTT+AGG | + | chr2_4:58435613-58435632 | Msa0338230:CDS | 45.0% |
| !! | AGCAGACAAGTTGGTACAAC+TGG | + | chr2_4:58436430-58436449 | Msa0338230:three_prime_UTR | 45.0% |
| !! | ATAATATAAGTAAATATTTA+TGG | + | chr2_4:58435964-58435983 | Msa0338230:intron | 5.0% |
| AGCGGTGAAGATGTTAGCGA+TGG | - | chr2_4:58430572-58430591 | None:intergenic | 50.0% | |
| !! | AAATAGCGGAGAGGGTACCT+TGG | - | chr2_4:58430611-58430630 | None:intergenic | 50.0% |
| ! | GGGAAAGGAAATAGCGGAGA+GGG | - | chr2_4:58430619-58430638 | None:intergenic | 50.0% |
| ! | GCACCGACACTTCTGATTGA+AGG | + | chr2_4:58430839-58430858 | Msa0338230:intron | 50.0% |
| GTACGAAATGAGAGCTTGGC+TGG | + | chr2_4:58431061-58431080 | Msa0338230:CDS | 50.0% | |
| CATCTTCCCACTCGACTGAA+AGG | + | chr2_4:58431085-58431104 | Msa0338230:CDS | 50.0% | |
| TCCAACCCTTTCAGTCGAGT+GGG | - | chr2_4:58431094-58431113 | None:intergenic | 50.0% | |
| ATCCAACCCTTTCAGTCGAG+TGG | - | chr2_4:58431095-58431114 | None:intergenic | 50.0% | |
| ! | GGGTTGGATGAAGCCTTATG+CGG | + | chr2_4:58431106-58431125 | Msa0338230:CDS | 50.0% |
| ! | TTGGATGAAGCCTTATGCGG+TGG | + | chr2_4:58431109-58431128 | Msa0338230:CDS | 50.0% |
| ! | ACAGAATTGGTTGGTCCACC+AGG | + | chr2_4:58431151-58431170 | Msa0338230:CDS | 50.0% |
| ! | TTGGTTGGTCCACCAGGAAT+TGG | + | chr2_4:58431157-58431176 | Msa0338230:CDS | 50.0% |
| CCATAATCCAAGGGCCTGTT+TGG | - | chr2_4:58431497-58431516 | None:intergenic | 50.0% | |
| CCAAACAGGCCCTTGGATTA+TGG | + | chr2_4:58431494-58431513 | Msa0338230:intron | 50.0% | |
| AAGCGAGCAATGAGAGCTTC+AGG | - | chr2_4:58431584-58431603 | None:intergenic | 50.0% | |
| CAAGAAAGGAATGGCACAGG+AGG | + | chr2_4:58431861-58431880 | Msa0338230:CDS | 50.0% | |
| CTTGACATGTCACAGATGGC+TGG | + | chr2_4:58431996-58432015 | Msa0338230:intron | 50.0% | |
| GTGAGACCTACACGAGAATC+AGG | + | chr2_4:58432145-58432164 | Msa0338230:intron | 50.0% | |
| ! | ACCTAGCGGGTACTAGAAGA+TGG | + | chr2_4:58432315-58432334 | Msa0338230:intron | 50.0% |
| CTAACTCAACCCGGAAAGCA+AGG | - | chr2_4:58432655-58432674 | None:intergenic | 50.0% | |
| ! | CTTGCTTTCCGGGTTGAGTT+AGG | + | chr2_4:58432653-58432672 | Msa0338230:intron | 50.0% |
| AGACTAGGCCTAACTCAACC+CGG | - | chr2_4:58432664-58432683 | None:intergenic | 50.0% | |
| CACACCTAGAACTGGACATC+TGG | - | chr2_4:58432755-58432774 | None:intergenic | 50.0% | |
| !! | GTCCAGTTCTAGGTGTGAGA+AGG | + | chr2_4:58432758-58432777 | Msa0338230:intron | 50.0% |
| CACCTTCTCACACCTAGAAC+TGG | - | chr2_4:58432763-58432782 | None:intergenic | 50.0% | |
| !! | ATACCCAGTTCTGGGCATGA+GGG | + | chr2_4:58432807-58432826 | Msa0338230:intron | 50.0% |
| GCAGCATGTTACACGCAGAT+CGG | - | chr2_4:58433115-58433134 | None:intergenic | 50.0% | |
| ! | GCAACTTCACTTGTTGCTGG+AGG | - | chr2_4:58433264-58433283 | None:intergenic | 50.0% |
| !!! | GCATGGCTGCTCTTGTTTTG+GGG | + | chr2_4:58433296-58433315 | Msa0338230:CDS | 50.0% |
| GGAGCTACGTCCAATTAGGA+TGG | + | chr2_4:58433398-58433417 | Msa0338230:intron | 50.0% | |
| ! | GGAGACTAGTTGAGAACCTG+CGG | - | chr2_4:58433518-58433537 | None:intergenic | 50.0% |
| AGCCTTGGGTCCAAATCAGA+GGG | - | chr2_4:58433682-58433701 | None:intergenic | 50.0% | |
| AAGCCTTGGGTCCAAATCAG+AGG | - | chr2_4:58433683-58433702 | None:intergenic | 50.0% | |
| AGGAGAGTTGAAAAGCTGGG+TGG | + | chr2_4:58433712-58433731 | Msa0338230:CDS | 50.0% | |
| GGAGAGTTGAAAAGCTGGGT+GGG | + | chr2_4:58433713-58433732 | Msa0338230:CDS | 50.0% | |
| CTTATCAGAGAGGGTTGGAC+AGG | - | chr2_4:58433777-58433796 | None:intergenic | 50.0% | |
| CTGTCCAACCCTCTCTGATA+AGG | + | chr2_4:58433775-58433794 | Msa0338230:intron | 50.0% | |
| ! | GTCATGGGCCTTATCAGAGA+GGG | - | chr2_4:58433786-58433805 | None:intergenic | 50.0% |
| ! | TGTCATGGGCCTTATCAGAG+AGG | - | chr2_4:58433787-58433806 | None:intergenic | 50.0% |
| TGGATGTAAAGCTGCGGCTT+CGG | + | chr2_4:58433831-58433850 | Msa0338230:intron | 50.0% | |
| CATGAAGAACCATGGAGGGA+GGG | - | chr2_4:58434142-58434161 | None:intergenic | 50.0% | |
| GATGCCATGAAGAACCATGG+AGG | - | chr2_4:58434147-58434166 | None:intergenic | 50.0% | |
| ! | GTTGAGATGATTAGCCGAGC+AGG | - | chr2_4:58434295-58434314 | None:intergenic | 50.0% |
| GCAACATCCAATTAGGAGGG+AGG | - | chr2_4:58434379-58434398 | None:intergenic | 50.0% | |
| GCCGCAACATCCAATTAGGA+GGG | - | chr2_4:58434382-58434401 | None:intergenic | 50.0% | |
| AGCCGCAACATCCAATTAGG+AGG | - | chr2_4:58434383-58434402 | None:intergenic | 50.0% | |
| AACATGATTGTGGGGCTTCC+AGG | + | chr2_4:58434477-58434496 | Msa0338230:CDS | 50.0% | |
| GCTTCCAGGCAACAAGCATT+GGG | + | chr2_4:58434491-58434510 | Msa0338230:CDS | 50.0% | |
| !! | ACAAGTTCTAGAGCGGTGGT+TGG | + | chr2_4:58435072-58435091 | Msa0338230:intron | 50.0% |
| ATCTCCAATGTCACCCCCTT+TGG | + | chr2_4:58435488-58435507 | Msa0338230:CDS | 50.0% | |
| AAAGCCAAAGGGGGTGACAT+TGG | - | chr2_4:58435495-58435514 | None:intergenic | 50.0% | |
| ! | GTCATAGCGTATGTAGTGGG+TGG | + | chr2_4:58435675-58435694 | Msa0338230:intron | 50.0% |
| CACAGACCGGATCTACTTCT+TGG | - | chr2_4:58435890-58435909 | None:intergenic | 50.0% | |
| TCGCAACATCATCACCGCCA+AGG | + | chr2_4:58430591-58430610 | Msa0338230:CDS | 55.0% | |
| ! | GGGGAAAGGAAATAGCGGAG+AGG | - | chr2_4:58430620-58430639 | None:intergenic | 55.0% |
| TCCCACTCGACTGAAAGGGT+TGG | + | chr2_4:58431090-58431109 | Msa0338230:CDS | 55.0% | |
| CTCATTGCTCGCTTCGTTGC+CGG | + | chr2_4:58431590-58431609 | Msa0338230:CDS | 55.0% | |
| TGCCGCGATTCACTACCTAG+CGG | + | chr2_4:58432301-58432320 | Msa0338230:intron | 55.0% | |
| ACCCGCTAGGTAGTGAATCG+CGG | - | chr2_4:58432306-58432325 | None:intergenic | 55.0% | |
| GCCATCTTCTAGTACCCGCT+AGG | - | chr2_4:58432319-58432338 | None:intergenic | 55.0% | |
| CGCTCCAGATGTCCAGTTCT+AGG | + | chr2_4:58432748-58432767 | Msa0338230:intron | 55.0% | |
| !! | GATACCCAGTTCTGGGCATG+AGG | + | chr2_4:58432806-58432825 | Msa0338230:intron | 55.0% |
| ACACCCTCATGCCCAGAACT+GGG | - | chr2_4:58432813-58432832 | None:intergenic | 55.0% | |
| TGTCTTCGTAACCACGGTGG+AGG | - | chr2_4:58432971-58432990 | None:intergenic | 55.0% | |
| CTGTGTCTTCGTAACCACGG+TGG | - | chr2_4:58432974-58432993 | None:intergenic | 55.0% | |
| GGGTTGGACAGGTTTCACAC+AGG | - | chr2_4:58433766-58433785 | None:intergenic | 55.0% | |
| ! | TGGGCCTTATCAGAGAGGGT+TGG | - | chr2_4:58433782-58433801 | None:intergenic | 55.0% |
| TCAATGACTCCCTCCCTCCA+TGG | + | chr2_4:58434130-58434149 | Msa0338230:intron | 55.0% | |
| CCATGAAGAACCATGGAGGG+AGG | - | chr2_4:58434143-58434162 | None:intergenic | 55.0% | |
| CCTCCCTCCATGGTTCTTCA+TGG | + | chr2_4:58434140-58434159 | Msa0338230:intron | 55.0% | |
| TTGGGACCCTCCCTCCTAAT+TGG | + | chr2_4:58434369-58434388 | Msa0338230:intron | 55.0% | |
| GGCTTCCAGGCAACAAGCAT+TGG | + | chr2_4:58434490-58434509 | Msa0338230:CDS | 55.0% | |
| ! | CCAACCCAATGCTTGTTGCC+TGG | - | chr2_4:58434498-58434517 | None:intergenic | 55.0% |
| !! | CCAGGCAACAAGCATTGGGT+TGG | + | chr2_4:58434495-58434514 | Msa0338230:CDS | 55.0% |
| AGTTGGAGTGGGTGGCGATT+TGG | + | chr2_4:58434984-58435003 | Msa0338230:intron | 55.0% | |
| GTTGGAGTGGGTGGCGATTT+GGG | + | chr2_4:58434985-58435004 | Msa0338230:intron | 55.0% | |
| ! | GTGGGTGGCGATTTGGGTTT+AGG | + | chr2_4:58434991-58435010 | Msa0338230:intron | 55.0% |
| ! | GGAGGTGTGCCCTTAACACT+AGG | - | chr2_4:58436140-58436159 | None:intergenic | 55.0% |
| ! | GGCGGTGATGATGTTGCGAG+CGG | - | chr2_4:58430590-58430609 | None:intergenic | 60.0% |
| !! | TAGCGGAGAGGGTACCTTGG+CGG | - | chr2_4:58430608-58430627 | None:intergenic | 60.0% |
| AAATAGCGGTGCGAGCACGG+TGG | - | chr2_4:58432282-58432301 | None:intergenic | 60.0% | |
| GGCAAATAGCGGTGCGAGCA+CGG | - | chr2_4:58432285-58432304 | None:intergenic | 60.0% | |
| GCCGCGATTCACTACCTAGC+GGG | + | chr2_4:58432302-58432321 | Msa0338230:intron | 60.0% | |
| CACACCCTCATGCCCAGAAC+TGG | - | chr2_4:58432814-58432833 | None:intergenic | 60.0% | |
| !! | TAACCAACAGTGCTGGCCGC+AGG | + | chr2_4:58433499-58433518 | Msa0338230:intron | 60.0% |
| TTATTGGGGGCAGACGGCAG+AGG | + | chr2_4:58433651-58433670 | Msa0338230:CDS | 60.0% | |
| AGAGGTCGGGCCCTCTGATT+TGG | + | chr2_4:58433669-58433688 | Msa0338230:CDS | 60.0% | |
| !! | GGCCCTCTGATTTGGACCCA+AGG | + | chr2_4:58433677-58433696 | Msa0338230:CDS | 60.0% |
| ! | GGGTGGGTTCTGCTGTGATG+AGG | + | chr2_4:58433729-58433748 | Msa0338230:CDS | 60.0% |
| GGCTGATGTAGCCTCCACCG+TGG | + | chr2_4:58432957-58432976 | Msa0338230:intron | 65.0% | |
| GAACCTGCGGCCAGCACTGT+TGG | - | chr2_4:58433505-58433524 | None:intergenic | 65.0% | |
| GCGAGCACGGTGGTGCGTAG+CGG | - | chr2_4:58432272-58432291 | None:intergenic | 70.0% | |
| TGGGGGCAGACGGCAGAGGT+CGG | + | chr2_4:58433655-58433674 | Msa0338230:CDS | 70.0% | |
| GGGGGCAGACGGCAGAGGTC+GGG | + | chr2_4:58433656-58433675 | Msa0338230:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 58430484 | 58436541 | 58430484 | ID=Msa0338230;Name=Msa0338230 |
| chr2_4 | mRNA | 58430484 | 58436541 | 58430484 | ID=Msa0338230-mRNA-1;Parent=Msa0338230;Name=Msa0338230-mRNA-1;_AED=0.18;_eAED=0.18;_QI=45|0.83|0.92|0.92|0.91|0.92|13|244|403 |
| chr2_4 | exon | 58430484 | 58430612 | 58430484 | ID=Msa0338230-mRNA-1:exon:17972;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58430694 | 58430807 | 58430694 | ID=Msa0338230-mRNA-1:exon:17973;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58431037 | 58431189 | 58431037 | ID=Msa0338230-mRNA-1:exon:17974;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58431576 | 58431679 | 58431576 | ID=Msa0338230-mRNA-1:exon:17975;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58431819 | 58431882 | 58431819 | ID=Msa0338230-mRNA-1:exon:17976;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58432011 | 58432066 | 58432011 | ID=Msa0338230-mRNA-1:exon:17977;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58433237 | 58433317 | 58433237 | ID=Msa0338230-mRNA-1:exon:17978;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58433649 | 58433750 | 58433649 | ID=Msa0338230-mRNA-1:exon:17979;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58434475 | 58434534 | 58434475 | ID=Msa0338230-mRNA-1:exon:17980;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58434616 | 58434707 | 58434616 | ID=Msa0338230-mRNA-1:exon:17981;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58434777 | 58434896 | 58434777 | ID=Msa0338230-mRNA-1:exon:17982;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58435463 | 58435644 | 58435463 | ID=Msa0338230-mRNA-1:exon:17983;Parent=Msa0338230-mRNA-1 |
| chr2_4 | exon | 58436298 | 58436541 | 58436298 | ID=Msa0338230-mRNA-1:exon:17984;Parent=Msa0338230-mRNA-1 |
| chr2_4 | five_prime_UTR | 58430484 | 58430528 | 58430484 | ID=Msa0338230-mRNA-1:five_prime_utr;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58430529 | 58430612 | 58430529 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58430694 | 58430807 | 58430694 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58431037 | 58431189 | 58431037 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58431576 | 58431679 | 58431576 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58431819 | 58431882 | 58431819 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58432011 | 58432066 | 58432011 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58433237 | 58433317 | 58433237 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58433649 | 58433750 | 58433649 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58434475 | 58434534 | 58434475 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58434616 | 58434707 | 58434616 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58434777 | 58434896 | 58434777 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | CDS | 58435463 | 58435644 | 58435463 | ID=Msa0338230-mRNA-1:cds;Parent=Msa0338230-mRNA-1 |
| chr2_4 | three_prime_UTR | 58436298 | 58436541 | 58436298 | ID=Msa0338230-mRNA-1:three_prime_utr;Parent=Msa0338230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
