Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807320 | XP_003615366.1 | 98.619 | 507 | 7 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1041 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807320 | sp|P34899|GLYM_PEA | 84.884 | 516 | 69 | 2 | 1 | 507 | 3 | 518 | 0.0 | 904 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807320 | G7K5Z4 | 98.619 | 507 | 7 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1041 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0674560 | Msa0807320 | 0.800556 | 1.363463e-48 | -8.615850e-47 |
| Msa0807320 | Msa0937230 | 0.817093 | 3.942986e-52 | -8.615850e-47 |
| Msa0338230 | Msa0807320 | 0.800249 | 1.574664e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807320 | MtrunA17_Chr5g0428001 | 98.619 | 507 | 7 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1041 |
| Msa0807320 | MtrunA17_Chr5g0411661 | 84.109 | 516 | 73 | 2 | 1 | 507 | 3 | 518 | 0.0 | 895 |
| Msa0807320 | MtrunA17_Chr2g0285171 | 59.868 | 456 | 170 | 3 | 45 | 497 | 87 | 532 | 0.0 | 572 |
| Msa0807320 | MtrunA17_Chr8g0378091 | 58.030 | 467 | 187 | 5 | 42 | 505 | 9 | 469 | 0.0 | 555 |
| Msa0807320 | MtrunA17_Chr3g0121851 | 57.816 | 467 | 188 | 5 | 42 | 505 | 9 | 469 | 0.0 | 550 |
| Msa0807320 | MtrunA17_Chr2g0277581 | 53.219 | 466 | 206 | 5 | 42 | 500 | 133 | 593 | 1.49e-172 | 499 |
| Msa0807320 | MtrunA17_Chr3g0115291 | 52.371 | 464 | 206 | 5 | 42 | 498 | 120 | 575 | 1.22e-168 | 488 |
| Msa0807320 | MtrunA17_Chr7g0268951 | 62.286 | 175 | 66 | 0 | 70 | 244 | 1 | 175 | 9.05e-74 | 231 |
| Msa0807320 | MtrunA17_Chr1g0186271 | 37.048 | 332 | 151 | 7 | 160 | 490 | 10 | 284 | 3.02e-56 | 190 |
| Msa0807320 | MtrunA17_Chr7g0268941 | 47.020 | 151 | 79 | 1 | 349 | 498 | 16 | 166 | 4.14e-39 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807320 | AT5G26780.1 | 82.979 | 517 | 78 | 2 | 1 | 507 | 1 | 517 | 0.0 | 896 |
| Msa0807320 | AT5G26780.4 | 82.979 | 517 | 78 | 2 | 1 | 507 | 1 | 517 | 0.0 | 896 |
| Msa0807320 | AT4G37930.1 | 84.016 | 513 | 74 | 2 | 1 | 505 | 3 | 515 | 0.0 | 890 |
| Msa0807320 | AT5G26780.2 | 80.675 | 533 | 77 | 3 | 1 | 507 | 1 | 533 | 0.0 | 887 |
| Msa0807320 | AT5G26780.3 | 80.675 | 533 | 77 | 3 | 1 | 507 | 1 | 533 | 0.0 | 887 |
| Msa0807320 | AT4G32520.2 | 61.013 | 454 | 168 | 3 | 45 | 497 | 83 | 528 | 0.0 | 585 |
| Msa0807320 | AT4G32520.1 | 61.013 | 454 | 168 | 3 | 45 | 497 | 83 | 528 | 0.0 | 585 |
| Msa0807320 | AT4G13930.1 | 57.816 | 467 | 188 | 5 | 42 | 505 | 9 | 469 | 0.0 | 545 |
| Msa0807320 | AT4G13890.1 | 55.628 | 462 | 196 | 5 | 42 | 500 | 9 | 464 | 0.0 | 523 |
| Msa0807320 | AT4G13890.2 | 59.375 | 384 | 152 | 3 | 42 | 422 | 9 | 391 | 5.99e-166 | 475 |
| Msa0807320 | AT1G22020.2 | 50.107 | 467 | 219 | 5 | 42 | 500 | 139 | 599 | 4.58e-163 | 475 |
| Msa0807320 | AT1G22020.1 | 50.107 | 467 | 219 | 5 | 42 | 500 | 139 | 599 | 4.58e-163 | 475 |
| Msa0807320 | AT1G36370.1 | 51.087 | 460 | 211 | 5 | 42 | 493 | 135 | 588 | 1.00e-162 | 474 |
Find 140 sgRNAs with CRISPR-Local
Find 574 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATAGATATTAATTATT+TGG | 0.120999 | 5_3:+28183011 | Msa0807320:intron |
| AAACTGAAGTTGAACAATTT+TGG | 0.129088 | 5_3:+28183078 | Msa0807320:three_prime_UTR |
| AGTTACTAAGAACTTGTTTC+TGG | 0.199826 | 5_3:-28181341 | None:intergenic |
| CAGAATTGCCTTACAGATTA+AGG | 0.200770 | 5_3:+28182476 | Msa0807320:CDS |
| GCACCGGCAACTATTAATTT+TGG | 0.206093 | 5_3:-28179779 | None:intergenic |
| AAGCGTGCATTGGAAGCTTT+TGG | 0.259016 | 5_3:+28174936 | Msa0807320:CDS |
| GGCAGTTATGTTAGCTGATA+TGG | 0.292537 | 5_3:+28179953 | Msa0807320:CDS |
| GTCAATGTGCAGTCATTATC+TGG | 0.297729 | 5_3:+28176685 | Msa0807320:intron |
| GCTAAGCAGTTTCCCACAAT+TGG | 0.305638 | 5_3:+28182730 | Msa0807320:CDS |
| TTCTGGTAATTCTTGAATTC+CGG | 0.322524 | 5_3:-28181324 | None:intergenic |
| AGATGTGTCTGCAATGGTTC+CGG | 0.325959 | 5_3:+28182276 | Msa0807320:CDS |
| TCCATTTGTCAGGGCATTGA+TGG | 0.329428 | 5_3:+28182190 | Msa0807320:intron |
| TGTGTGGGTATATTATTATA+TGG | 0.340946 | 5_3:-28174174 | None:intergenic |
| CCTCACAATCACACTATTAC+AGG | 0.355329 | 5_3:+28181115 | Msa0807320:CDS |
| AGGCCAAAATTAATAGTTGC+CGG | 0.371671 | 5_3:+28179776 | Msa0807320:CDS |
| TGTATGGAGTTAATTTCTTT+TGG | 0.371703 | 5_3:+28182793 | Msa0807320:three_prime_UTR |
| GAACTCCTGCTCTTACATCT+AGG | 0.374148 | 5_3:+28182400 | Msa0807320:CDS |
| GAAACCTCATGAGAGAATTA+TGG | 0.376002 | 5_3:+28176744 | Msa0807320:CDS |
| AAAGGCTATGACCTTGTATC+TGG | 0.381639 | 5_3:+28181536 | Msa0807320:CDS |
| TGGCCATTGTGATTTGTGTT+TGG | 0.396454 | 5_3:-28174219 | None:intergenic |
| AGATACAGCTGATATCTTCT+TGG | 0.397878 | 5_3:-28177786 | None:intergenic |
| GAGAGAAGTTGGTTTGTTGA+TGG | 0.399841 | 5_3:-28174266 | None:intergenic |
| TATCCTGGTGCTAGATACTA+TGG | 0.403377 | 5_3:+28174777 | Msa0807320:CDS |
| TGGGTTGGATCCAGCACAAT+GGG | 0.405357 | 5_3:+28174956 | Msa0807320:CDS |
| ATTATATGGGTTGGCGGTAG+TGG | 0.406463 | 5_3:-28174160 | None:intergenic |
| GATCTCCGCCGTGAAGTAGA+AGG | 0.418200 | 5_3:+28182703 | Msa0807320:CDS |
| TCGATTATATCTTCGATCTC+AGG | 0.425038 | 5_3:-28174555 | None:intergenic |
| ATGATAATAAACCATCTATA+CGG | 0.426996 | 5_3:+28182926 | Msa0807320:three_prime_UTR |
| CAGATTAAGGAAAATTCTAA+AGG | 0.428238 | 5_3:+28182489 | Msa0807320:CDS |
| AGAATGGTCAAGTGCAGAAA+AGG | 0.431455 | 5_3:+28182893 | Msa0807320:three_prime_UTR |
| GATGTGTCTGCAATGGTTCC+GGG | 0.431484 | 5_3:+28182277 | Msa0807320:CDS |
| AAATATTCGTACTCTGGTCT+TGG | 0.431656 | 5_3:+28182846 | Msa0807320:three_prime_UTR |
| GTGGGGCTATGATATTCTTC+AGG | 0.434783 | 5_3:+28180075 | Msa0807320:CDS |
| AAAATGATAAACCGTATAGA+TGG | 0.438674 | 5_3:-28182937 | None:intergenic |
| GCATCTATCACATGGATATC+AGG | 0.439763 | 5_3:+28176789 | Msa0807320:CDS |
| TCTTTGAAACAATGCCATAC+AGG | 0.439854 | 5_3:+28177813 | Msa0807320:CDS |
| GTGTAAACTTGGAAGTTAGA+AGG | 0.444272 | 5_3:-28176712 | None:intergenic |
| CTAAGCAGTTTCCCACAATT+GGG | 0.447170 | 5_3:+28182731 | Msa0807320:CDS |
| GTGTGGGTATATTATTATAT+GGG | 0.455358 | 5_3:-28174173 | None:intergenic |
| TCAATAAAGCAGTGTAAACT+TGG | 0.458750 | 5_3:-28176723 | None:intergenic |
| CTACGAAGACAAAATAAATC+AGG | 0.459538 | 5_3:+28181066 | Msa0807320:CDS |
| TGGTGAATTGCGTTGGAGGT+TGG | 0.463633 | 5_3:-28174199 | None:intergenic |
| ACCATTGCAGACACATCTCC+TGG | 0.466729 | 5_3:-28182271 | None:intergenic |
| CTTAGCAGTTGCATTGAAGC+AGG | 0.467847 | 5_3:+28181138 | Msa0807320:CDS |
| AACTCCTGCTCTTACATCTA+GGG | 0.470086 | 5_3:+28182401 | Msa0807320:CDS |
| AAATTCAGGCACAAAGTTGA+AGG | 0.472831 | 5_3:+28182630 | Msa0807320:intron |
| TAACAAGTGAAGATGATGTA+TGG | 0.475496 | 5_3:+28182777 | Msa0807320:exon |
| GCGTTGGAGGTTGGTGTGTG+TGG | 0.481655 | 5_3:-28174190 | None:intergenic |
| TGAAAGAGATAAACAAGAAA+GGG | 0.482029 | 5_3:+28180105 | Msa0807320:CDS |
| TTAAGTTTACCAACACCAAA+TGG | 0.482107 | 5_3:-28181571 | None:intergenic |
| ACAACATCTGCATAATCAAA+AGG | 0.483389 | 5_3:-28180017 | None:intergenic |
| GGGTATATTATTATATGGGT+TGG | 0.485559 | 5_3:-28174169 | None:intergenic |
| CTCTATCTCGAACCCAATTG+TGG | 0.491565 | 5_3:-28182743 | None:intergenic |
| GTCAGGGCATTGATGGCTCA+AGG | 0.493719 | 5_3:+28182197 | Msa0807320:intron |
| ACCAAGCGATAGAGAGAAGT+TGG | 0.494543 | 5_3:-28174277 | None:intergenic |
| CGTTGGAGGTTGGTGTGTGT+GGG | 0.494642 | 5_3:-28174189 | None:intergenic |
| TATGTACCTCCCCATTGTGC+TGG | 0.495932 | 5_3:-28174966 | None:intergenic |
| AAATACAGTGAAGGTTATCC+TGG | 0.496861 | 5_3:+28174762 | Msa0807320:CDS |
| TGTTTGGTGAATTGCGTTGG+AGG | 0.498499 | 5_3:-28174203 | None:intergenic |
| GTGCTCTCATCCAACCTGTA+TGG | 0.509528 | 5_3:-28177827 | None:intergenic |
| TAGCATAACCTTCTACTTCA+CGG | 0.512776 | 5_3:-28182711 | None:intergenic |
| CTGCAGAGCTTGTTAGAGAA+AGG | 0.512827 | 5_3:+28181518 | Msa0807320:intron |
| AGAAGTTGGTTTGTTGATGG+TGG | 0.517830 | 5_3:-28174263 | None:intergenic |
| GTTCCGGGAGGGATCAGAAT+GGG | 0.521468 | 5_3:+28182292 | Msa0807320:CDS |
| AGTCACTTCGTGGGCCACGT+GGG | 0.521577 | 5_3:+28180057 | Msa0807320:CDS |
| CTGAAAGAGATAAACAAGAA+AGG | 0.522116 | 5_3:+28180104 | Msa0807320:CDS |
| ATCAGTGGATTAGTTGCTGC+AGG | 0.524776 | 5_3:+28179981 | Msa0807320:CDS |
| ACCAACTTCTCTCTATCGCT+TGG | 0.526527 | 5_3:+28174276 | Msa0807320:CDS |
| GTTCATGTAGGCTATGACAC+CGG | 0.530615 | 5_3:+28181305 | Msa0807320:intron |
| AAACAGCTCAACGATCCTCT+TGG | 0.531089 | 5_3:+28174522 | Msa0807320:CDS |
| TATATTATTATATGGGTTGG+CGG | 0.531677 | 5_3:-28174166 | None:intergenic |
| GAATGGTCAAGTGCAGAAAA+GGG | 0.534462 | 5_3:+28182894 | Msa0807320:three_prime_UTR |
| CAACGATCCTCTTGGTGTAG+TGG | 0.535272 | 5_3:+28174530 | Msa0807320:CDS |
| TGAGGACCACCTTGAAGCCC+AGG | 0.535284 | 5_3:-28181097 | None:intergenic |
| TGATTATGCGCGTATTCGCA+AGG | 0.537140 | 5_3:+28179823 | Msa0807320:CDS |
| TGCTGAAAATATTCGTACTC+TGG | 0.538305 | 5_3:+28182840 | Msa0807320:three_prime_UTR |
| GGCTATGACCTTGTATCTGG+TGG | 0.544885 | 5_3:+28181539 | Msa0807320:CDS |
| TTTGTGTCAGAAGCGTGCAT+TGG | 0.545541 | 5_3:+28174926 | Msa0807320:CDS |
| TCTATCTCGAACCCAATTGT+GGG | 0.548319 | 5_3:-28182742 | None:intergenic |
| ATGTGATAGATGCCCACCAT+GGG | 0.548654 | 5_3:-28176779 | None:intergenic |
| TTGTGTTTGGTGAATTGCGT+TGG | 0.551693 | 5_3:-28174206 | None:intergenic |
| TGATGGCTCAAGGGTTGAGA+AGG | 0.551974 | 5_3:+28182207 | Msa0807320:CDS |
| TCTCAGTTCCACCAGATACA+AGG | 0.554612 | 5_3:-28181547 | None:intergenic |
| CCACCATAGTATCTAGCACC+AGG | 0.554761 | 5_3:-28174780 | None:intergenic |
| GGCTATGATATTCTTCAGGA+AGG | 0.554841 | 5_3:+28180079 | Msa0807320:CDS |
| TTGTCGGTGATGCAAGCGGT+TGG | 0.559546 | 5_3:+28174723 | Msa0807320:CDS |
| TCAGGGCATTGATGGCTCAA+GGG | 0.559665 | 5_3:+28182198 | Msa0807320:intron |
| TGAAACAATGCCATACAGGT+TGG | 0.563831 | 5_3:+28177817 | Msa0807320:CDS |
| AGAGATAAACAAGAAAGGGC+AGG | 0.567037 | 5_3:+28180109 | Msa0807320:CDS |
| GTACCCATTCTGATCCCTCC+CGG | 0.567732 | 5_3:-28182295 | None:intergenic |
| ACAACACATAAGTCACTTCG+TGG | 0.573831 | 5_3:+28180047 | Msa0807320:CDS |
| GGAACGTGAGTGAGCGTGGT+TGG | 0.575356 | 5_3:-28174139 | None:intergenic |
| CATGGTGGGCATCTATCACA+TGG | 0.576511 | 5_3:+28176781 | Msa0807320:CDS |
| AACACAAATCACAATGGCCA+TGG | 0.577099 | 5_3:+28174222 | Msa0807320:exon |
| AAGTCACTTCGTGGGCCACG+TGG | 0.581045 | 5_3:+28180056 | Msa0807320:CDS |
| TACAGGTTGGATGAGAGCAC+TGG | 0.582002 | 5_3:+28177830 | Msa0807320:CDS |
| GGTGATGCAAGCGGTTGGAT+CGG | 0.589257 | 5_3:+28174728 | Msa0807320:CDS |
| TGGTGGAACTGAGAACCATT+TGG | 0.589693 | 5_3:+28181556 | Msa0807320:CDS |
| TTGGGTTGGATCCAGCACAA+TGG | 0.591777 | 5_3:+28174955 | Msa0807320:CDS |
| GCTGATATGGCACACATCAG+TGG | 0.593001 | 5_3:+28179966 | Msa0807320:CDS |
| ACGAAGTGACTTATGTGTTG+TGG | 0.593438 | 5_3:-28180045 | None:intergenic |
| TAACTCCTCGACATTTGCAC+AGG | 0.594690 | 5_3:+28181359 | Msa0807320:CDS |
| TCTGCATAATCAAAAGGAGA+AGG | 0.596550 | 5_3:-28180011 | None:intergenic |
| GTCACTTCGTGGGCCACGTG+GGG | 0.596633 | 5_3:+28180058 | Msa0807320:CDS |
| TACGCGCATAATCATAAAGA+CGG | 0.597101 | 5_3:-28179814 | None:intergenic |
| ACGTGAGTGAGCGTGGTTGG+TGG | 0.600429 | 5_3:-28174136 | None:intergenic |
| TTAGGTCTGTGATAAACAGA+AGG | 0.603056 | 5_3:+28179932 | Msa0807320:intron |
| GTCGTTGTCGGTGATGCAAG+CGG | 0.608775 | 5_3:+28174719 | Msa0807320:CDS |
| GGTTCCGGGAGGGATCAGAA+TGG | 0.610606 | 5_3:+28182291 | Msa0807320:CDS |
| AACTGAGAACCATTTGGTGT+TGG | 0.610815 | 5_3:+28181562 | Msa0807320:CDS |
| ACGCGCATAATCATAAAGAC+GGG | 0.612584 | 5_3:-28179813 | None:intergenic |
| ACTCCTGCTCTTACATCTAG+GGG | 0.614414 | 5_3:+28182402 | Msa0807320:CDS |
| TCCAGGAGATGTGTCTGCAA+TGG | 0.614881 | 5_3:+28182270 | Msa0807320:CDS |
| AAACCCCTAGATGTAAGAGC+AGG | 0.616006 | 5_3:-28182405 | None:intergenic |
| AGTGCCATAATTCTCTCATG+AGG | 0.623699 | 5_3:-28176748 | None:intergenic |
| ACGGGCATAAGCACTAGCAC+CGG | 0.623924 | 5_3:-28179795 | None:intergenic |
| CATGTGATAGATGCCCACCA+TGG | 0.624147 | 5_3:-28176780 | None:intergenic |
| GTTTACCTGTGCAAATGTCG+AGG | 0.632815 | 5_3:-28181364 | None:intergenic |
| ATGACGAATAAATACAGTGA+AGG | 0.634321 | 5_3:+28174753 | Msa0807320:CDS |
| TAGTGGAACGTGAGTGAGCG+TGG | 0.642453 | 5_3:-28174143 | None:intergenic |
| GCTATGATATTCTTCAGGAA+GGG | 0.645121 | 5_3:+28180080 | Msa0807320:CDS |
| AGTGAGTCTGCGAAGTGCCA+TGG | 0.645311 | 5_3:-28174239 | None:intergenic |
| TTGGATCCAGCACAATGGGG+AGG | 0.654947 | 5_3:+28174960 | Msa0807320:CDS |
| TTTGATAAGGTACATTGACA+TGG | 0.655626 | 5_3:+28174896 | Msa0807320:intron |
| TGTCTGCAATGGTTCCGGGA+GGG | 0.661770 | 5_3:+28182281 | Msa0807320:CDS |
| TGGTTATATTGACTATGACC+AGG | 0.663546 | 5_3:+28177850 | Msa0807320:CDS |
| GTTGGTAAACTTAAGAAACA+AGG | 0.669487 | 5_3:+28181580 | Msa0807320:CDS |
| CCTGGTGCTAGATACTATGG+TGG | 0.671775 | 5_3:+28174780 | Msa0807320:CDS |
| TCAGGATCCACTACACCAAG+AGG | 0.682850 | 5_3:-28174537 | None:intergenic |
| CAACACATAAGTCACTTCGT+GGG | 0.684698 | 5_3:+28180048 | Msa0807320:CDS |
| CCTGTAATAGTGTGATTGTG+AGG | 0.688267 | 5_3:-28181115 | None:intergenic |
| GGGTTGGATCCAGCACAATG+GGG | 0.690376 | 5_3:+28174957 | Msa0807320:CDS |
| TGTGATAGATGCCCACCATG+GGG | 0.693725 | 5_3:-28176778 | None:intergenic |
| AAGAATATCATAGCCCCACG+TGG | 0.696480 | 5_3:-28180071 | None:intergenic |
| GTGTCTGCAATGGTTCCGGG+AGG | 0.697098 | 5_3:+28182280 | Msa0807320:CDS |
| AGATTTGTGAGTCTGTTGAG+CGG | 0.697745 | 5_3:-28174400 | None:intergenic |
| TCACCAAACACAAATCACAA+TGG | 0.702440 | 5_3:+28174216 | Msa0807320:exon |
| GTGATAGATGCCCACCATGG+GGG | 0.708056 | 5_3:-28176777 | None:intergenic |
| AGTAGCTGAATACTTTGACG+CGG | 0.710734 | 5_3:+28182449 | Msa0807320:CDS |
| CATAACCTTCTACTTCACGG+CGG | 0.779036 | 5_3:-28182708 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATATAAATTACTGATTT+TGG | - | chr5_3:28176008-28176027 | None:intergenic | 10.0% |
| !!! | GTTTTTAAAGAAAATAATTA+TGG | + | chr5_3:28181850-28181869 | Msa0807320:intron | 10.0% |
| !!! | TTTTAAAGAAAATAATTATG+GGG | + | chr5_3:28181852-28181871 | Msa0807320:intron | 10.0% |
| !! | TTGTTTATTAAATTAAATTC+AGG | + | chr5_3:28182616-28182635 | Msa0807320:intron | 10.0% |
| !!! | TTTCTTTTTTTTTCTTTTTT+TGG | - | chr5_3:28182995-28183014 | None:intergenic | 10.0% |
| !! | GAAAATAGATATTAATTATT+TGG | + | chr5_3:28183011-28183030 | Msa0807320:intron | 10.0% |
| !!! | ATTTTTTAGCATCTATTTTA+AGG | - | chr5_3:28175580-28175599 | None:intergenic | 15.0% |
| !!! | ATTGCTCTTTTATAATTTAT+TGG | + | chr5_3:28175789-28175808 | Msa0807320:intron | 15.0% |
| !!! | TTGCTCTTTTATAATTTATT+GGG | + | chr5_3:28175790-28175809 | Msa0807320:intron | 15.0% |
| !!! | AGTAATTATTTTACTACTAA+TGG | + | chr5_3:28175925-28175944 | Msa0807320:intron | 15.0% |
| !! | AAAAAAAAAAAACAGTAAGT+AGG | - | chr5_3:28176164-28176183 | None:intergenic | 15.0% |
| !! | TTAAAATATTATGCATCAAA+AGG | - | chr5_3:28176453-28176472 | None:intergenic | 15.0% |
| !! | ACTTAAATAATGAAAACAAA+AGG | - | chr5_3:28176958-28176977 | None:intergenic | 15.0% |
| !! | AATTAAAAAATGTCTTACAT+AGG | + | chr5_3:28177039-28177058 | Msa0807320:intron | 15.0% |
| !! | TTTCTTTCATAGATTTAAAA+AGG | + | chr5_3:28177250-28177269 | Msa0807320:intron | 15.0% |
| !!! | AATTATGAATTTTTAAGATG+AGG | + | chr5_3:28178086-28178105 | Msa0807320:intron | 15.0% |
| !! | TCAAACAAAAACTAAAATAA+AGG | + | chr5_3:28178731-28178750 | Msa0807320:intron | 15.0% |
| !! | CAAACAAAAACTAAAATAAA+GGG | + | chr5_3:28178732-28178751 | Msa0807320:intron | 15.0% |
| !! | AAACAAAAACTAAAATAAAG+GGG | + | chr5_3:28178733-28178752 | Msa0807320:intron | 15.0% |
| !! | AAGATTATACAAAACTTAAA+GGG | - | chr5_3:28179673-28179692 | None:intergenic | 15.0% |
| !! | AAAGATTATACAAAACTTAA+AGG | - | chr5_3:28179674-28179693 | None:intergenic | 15.0% |
| !!! | ATATTTTATGTACATAACAA+TGG | + | chr5_3:28179874-28179893 | Msa0807320:intron | 15.0% |
| !! | TTAATGTTACTAAAATTCTA+AGG | + | chr5_3:28180154-28180173 | Msa0807320:intron | 15.0% |
| !! | AATGAAAAAAATAACAATCT+TGG | + | chr5_3:28180226-28180245 | Msa0807320:intron | 15.0% |
| !! | ATGAAAAAAATAACAATCTT+GGG | + | chr5_3:28180227-28180246 | Msa0807320:intron | 15.0% |
| !! | TCAATATTTATTGAGATATT+AGG | + | chr5_3:28180652-28180671 | Msa0807320:intron | 15.0% |
| !!! | TATTTTAAAATCCATCAATT+GGG | + | chr5_3:28180920-28180939 | Msa0807320:intron | 15.0% |
| !! | TTTAAAGAAAATAATTATGG+GGG | + | chr5_3:28181853-28181872 | Msa0807320:intron | 15.0% |
| !! | AAACATCCAATAAAATAAAT+TGG | - | chr5_3:28182009-28182028 | None:intergenic | 15.0% |
| !! | AAATATGTTGATATTGATAT+TGG | + | chr5_3:28182056-28182075 | Msa0807320:intron | 15.0% |
| !! | AATATGTTGATATTGATATT+GGG | + | chr5_3:28182057-28182076 | Msa0807320:intron | 15.0% |
| !!! | ATATTTTGCAATATTGATAT+TGG | + | chr5_3:28182102-28182121 | Msa0807320:intron | 15.0% |
| !!! | TATTTTGCAATATTGATATT+GGG | + | chr5_3:28182103-28182122 | Msa0807320:intron | 15.0% |
| !! | AAAAACTGTAGATATAAACT+TGG | - | chr5_3:28174616-28174635 | None:intergenic | 20.0% |
| !! | AAAAAAAGTTAATCTCTGTT+TGG | - | chr5_3:28174654-28174673 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTTTTTAATGTGC+AGG | + | chr5_3:28174665-28174684 | Msa0807320:intron | 20.0% |
| !!! | CTTTTTTTTTTTAATGTGCA+GGG | + | chr5_3:28174666-28174685 | Msa0807320:intron | 20.0% |
| !! | TTTGCATTTGTAATTTGATA+AGG | + | chr5_3:28174883-28174902 | Msa0807320:intron | 20.0% |
| !!! | TGTTCAGTTAATTTGTTTTT+TGG | + | chr5_3:28175065-28175084 | Msa0807320:intron | 20.0% |
| !! | TCTTATAGACTAATATATCA+TGG | - | chr5_3:28175110-28175129 | None:intergenic | 20.0% |
| !!! | ATGATATATTAGTCTATAAG+AGG | + | chr5_3:28175109-28175128 | Msa0807320:intron | 20.0% |
| !!! | TATTGATTGCATTCTTTTAA+TGG | - | chr5_3:28175518-28175537 | None:intergenic | 20.0% |
| !! | AATAAAACAGAGACATTATT+TGG | - | chr5_3:28175550-28175569 | None:intergenic | 20.0% |
| !! | ATATATACAATGTATAACGA+GGG | - | chr5_3:28175758-28175777 | None:intergenic | 20.0% |
| !! | AATATATACAATGTATAACG+AGG | - | chr5_3:28175759-28175778 | None:intergenic | 20.0% |
| !!! | AAGAAATTAGTAAATGCTTT+TGG | + | chr5_3:28176057-28176076 | Msa0807320:intron | 20.0% |
| !!! | TGTCATTTTGCTATATTTTT+AGG | + | chr5_3:28176082-28176101 | Msa0807320:intron | 20.0% |
| !!! | TTTTTTCATCCCTTTTATAA+TGG | + | chr5_3:28176112-28176131 | Msa0807320:intron | 20.0% |
| !! | TAAACAAATTACTAACAACA+GGG | - | chr5_3:28176254-28176273 | None:intergenic | 20.0% |
| !! | ATAAACAAATTACTAACAAC+AGG | - | chr5_3:28176255-28176274 | None:intergenic | 20.0% |
| !! | TAATTTACTTCTTATTCATG+CGG | + | chr5_3:28176494-28176513 | Msa0807320:intron | 20.0% |
| !! | AAGAAAATAATTCATCAAAC+AGG | + | chr5_3:28176978-28176997 | Msa0807320:intron | 20.0% |
| !!! | ATTTTAGCCAAAAAACAAAA+AGG | + | chr5_3:28177006-28177025 | Msa0807320:intron | 20.0% |
| !! | ATACATGAATGAGTTTATAT+TGG | - | chr5_3:28178462-28178481 | None:intergenic | 20.0% |
| !!! | ACATGATAGAAAAAACTTTT+AGG | + | chr5_3:28178486-28178505 | Msa0807320:intron | 20.0% |
| !!! | AATTAAATTTGAAATCCAAC+TGG | - | chr5_3:28178918-28178937 | None:intergenic | 20.0% |
| !!! | GTTTATTTTGTTGAATTTTG+AGG | + | chr5_3:28178952-28178971 | Msa0807320:intron | 20.0% |
| !!! | ACACATTTGATTTTTTTTTC+TGG | - | chr5_3:28178987-28179006 | None:intergenic | 20.0% |
| !!! | AATTTAATCATTTTGTTCCT+AGG | + | chr5_3:28179075-28179094 | Msa0807320:intron | 20.0% |
| !!! | GTATACTCAAAATCTTATTT+TGG | + | chr5_3:28179206-28179225 | Msa0807320:intron | 20.0% |
| !! | GTGATTAAAACTTAACAATT+AGG | - | chr5_3:28179364-28179383 | None:intergenic | 20.0% |
| !!! | ACTCTTTTATATGCATTATA+TGG | + | chr5_3:28179488-28179507 | Msa0807320:intron | 20.0% |
| !! | AATTTACACAAAATCGTTAA+GGG | - | chr5_3:28179589-28179608 | None:intergenic | 20.0% |
| !! | AAATTTACACAAAATCGTTA+AGG | - | chr5_3:28179590-28179609 | None:intergenic | 20.0% |
| !! | GAAAAAAAAAAATTGAACCT+AGG | - | chr5_3:28179625-28179644 | None:intergenic | 20.0% |
| !! | AGATTATACAAAACTTAAAG+GGG | - | chr5_3:28179672-28179691 | None:intergenic | 20.0% |
| !!! | TTTCACACTTGAATTATTTT+AGG | + | chr5_3:28179914-28179933 | Msa0807320:intron | 20.0% |
| !!! | TACTAAAATTCTAAGGAAAA+AGG | + | chr5_3:28180161-28180180 | Msa0807320:intron | 20.0% |
| !!! | TTTTTTTCATTGTCTTTTGT+GGG | - | chr5_3:28180217-28180236 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCATTGTCTTTTG+TGG | - | chr5_3:28180218-28180237 | None:intergenic | 20.0% |
| !! | TGAAAAAAATAACAATCTTG+GGG | + | chr5_3:28180228-28180247 | Msa0807320:intron | 20.0% |
| !! | GTTTATGTAAGTGAAAATTT+AGG | - | chr5_3:28180322-28180341 | None:intergenic | 20.0% |
| !! | TTAAATCCTACTTTAACTAT+CGG | - | chr5_3:28180354-28180373 | None:intergenic | 20.0% |
| !!! | CTTTTATTAGCAAAACAATT+GGG | - | chr5_3:28180435-28180454 | None:intergenic | 20.0% |
| !!! | TCTTTTATTAGCAAAACAAT+TGG | - | chr5_3:28180436-28180455 | None:intergenic | 20.0% |
| !!! | TAAAAAATCAAGAATGGATT+GGG | - | chr5_3:28180789-28180808 | None:intergenic | 20.0% |
| !! | ATTGTGTAAAAAATCAAGAA+TGG | - | chr5_3:28180795-28180814 | None:intergenic | 20.0% |
| !!! | GTATTTTAAAATCCATCAAT+TGG | + | chr5_3:28180919-28180938 | Msa0807320:intron | 20.0% |
| !! | ACTAACTTAAGTATAGAATT+TGG | - | chr5_3:28180992-28181011 | None:intergenic | 20.0% |
| !! | AATATATACTTCAGTGTAAA+AGG | + | chr5_3:28181215-28181234 | Msa0807320:intron | 20.0% |
| !!! | ATTTTCATCTCAAATAACTT+TGG | + | chr5_3:28181641-28181660 | Msa0807320:intron | 20.0% |
| !!! | AAATGGCCAATTTATTTTAT+TGG | + | chr5_3:28182000-28182019 | Msa0807320:intron | 20.0% |
| !! | TATTGATATTGGGTTTAATT+TGG | + | chr5_3:28182067-28182086 | Msa0807320:intron | 20.0% |
| !! | TATTGATATTGGGTTTAATT+TGG | + | chr5_3:28182067-28182086 | Msa0807320:intron | 20.0% |
| !!! | TATATTTTGCAATACATCAA+AGG | + | chr5_3:28182147-28182166 | Msa0807320:intron | 20.0% |
| !!! | ACCTTTTTATATGCATATAT+TGG | + | chr5_3:28182330-28182349 | Msa0807320:intron | 20.0% |
| !! | ACCAATATATGCATATAAAA+AGG | - | chr5_3:28182334-28182353 | None:intergenic | 20.0% |
| !!! | TTTTTATATGCATATATTGG+TGG | + | chr5_3:28182333-28182352 | Msa0807320:intron | 20.0% |
| !!! | TGCATAATAGTTTCTTATTT+AGG | + | chr5_3:28182527-28182546 | Msa0807320:intron | 20.0% |
| !!! | GTGAATTATTTTATGAAGAA+TGG | + | chr5_3:28182877-28182896 | Msa0807320:three_prime_UTR | 20.0% |
| !! | ATGATAATAAACCATCTATA+CGG | + | chr5_3:28182926-28182945 | Msa0807320:three_prime_UTR | 20.0% |
| !!! | TATATTATTATATGGGTTGG+CGG | - | chr5_3:28174169-28174188 | None:intergenic | 25.0% |
| ! | GTGTGGGTATATTATTATAT+GGG | - | chr5_3:28174176-28174195 | None:intergenic | 25.0% |
| ! | TGTGTGGGTATATTATTATA+TGG | - | chr5_3:28174177-28174196 | None:intergenic | 25.0% |
| ! | AAAGGTAGAAAATGAAAATG+CGG | - | chr5_3:28174334-28174353 | None:intergenic | 25.0% |
| !!! | ATCATAAAAAGTGCTTACAT+CGG | - | chr5_3:28174430-28174449 | None:intergenic | 25.0% |
| ! | GAAATGAGTATGTTGAATTA+TGG | + | chr5_3:28174802-28174821 | Msa0807320:intron | 25.0% |
| ! | TTTAGTCTCACAAAGAATTT+GGG | + | chr5_3:28175023-28175042 | Msa0807320:intron | 25.0% |
| !! | TCATTTTCTCAAATTATCAC+TGG | - | chr5_3:28175264-28175283 | None:intergenic | 25.0% |
| !!! | TAGCATCTATTTTAAGGTTT+AGG | - | chr5_3:28175574-28175593 | None:intergenic | 25.0% |
| !!! | GGTGATTATTTTACTACTAA+TGG | + | chr5_3:28175839-28175858 | Msa0807320:intron | 25.0% |
| ! | AAACAAATTACTAACAACAG+GGG | - | chr5_3:28176253-28176272 | None:intergenic | 25.0% |
| ! | AAATATTATGCATCAAAAGG+AGG | - | chr5_3:28176450-28176469 | None:intergenic | 25.0% |
| ! | AGTAAATGTTCTAGTAAAGT+AGG | + | chr5_3:28176907-28176926 | Msa0807320:intron | 25.0% |
| !!! | CTCTTTTCCTTTTTGTTTTT+TGG | - | chr5_3:28177016-28177035 | None:intergenic | 25.0% |
| ! | CAAAAAACAAAAAGGAAAAG+AGG | + | chr5_3:28177014-28177033 | Msa0807320:intron | 25.0% |
| ! | CTATGGTAAAAAATCTTACA+AGG | + | chr5_3:28177074-28177093 | Msa0807320:intron | 25.0% |
| !!! | TTGTGTTTCTTTAGAATTTC+CGG | - | chr5_3:28177677-28177696 | None:intergenic | 25.0% |
| ! | TTCTTCTAATTCTAAGTAGT+TGG | + | chr5_3:28177929-28177948 | Msa0807320:intron | 25.0% |
| ! | ATACAATCTATAACTATGCA+TGG | - | chr5_3:28178018-28178037 | None:intergenic | 25.0% |
| ! | TGCATAGTTATAGATTGTAT+TGG | + | chr5_3:28178018-28178037 | Msa0807320:intron | 25.0% |
| ! | GATTATGGTGTTTAAATAGT+TGG | + | chr5_3:28178045-28178064 | Msa0807320:intron | 25.0% |
| !!! | GAAAAAACTTTTAGGATAGT+TGG | + | chr5_3:28178494-28178513 | Msa0807320:intron | 25.0% |
| !! | ATAGTTGGTTCATGAAAAAT+TGG | + | chr5_3:28178509-28178528 | Msa0807320:intron | 25.0% |
| ! | TGAAAAATTGGTTATATGAC+AGG | + | chr5_3:28178521-28178540 | Msa0807320:intron | 25.0% |
| ! | ACATGATAGCAAAAACATTT+AGG | + | chr5_3:28178609-28178628 | Msa0807320:intron | 25.0% |
| ! | TTCATGAAAAACTGGTTATA+TGG | + | chr5_3:28178640-28178659 | Msa0807320:intron | 25.0% |
| ! | AAAAACTAAAATAAAGGGGT+TGG | + | chr5_3:28178737-28178756 | Msa0807320:intron | 25.0% |
| ! | AAAACTAAAATAAAGGGGTT+GGG | + | chr5_3:28178738-28178757 | Msa0807320:intron | 25.0% |
| !!! | TGACAAAATATTTTGAACCT+AGG | - | chr5_3:28179095-28179114 | None:intergenic | 25.0% |
| !!! | TACTCAAAATCTTATTTTGG+TGG | + | chr5_3:28179209-28179228 | Msa0807320:intron | 25.0% |
| ! | CAAAGAAAAGTAGAATATAC+AGG | - | chr5_3:28179243-28179262 | None:intergenic | 25.0% |
| !!! | AAAAAGGCAACTTTAGTTTT+TGG | + | chr5_3:28179302-28179321 | Msa0807320:intron | 25.0% |
| !! | AGTATTTCAAGTGTAATGTA+AGG | + | chr5_3:28179443-28179462 | Msa0807320:intron | 25.0% |
| ! | AATTTAATCATTTCAAGCCT+AGG | + | chr5_3:28179605-28179624 | Msa0807320:intron | 25.0% |
| ! | ATAATCTTTCATTCATGTCA+TGG | + | chr5_3:28179685-28179704 | Msa0807320:intron | 25.0% |
| ! | TAATCTTTCATTCATGTCAT+GGG | + | chr5_3:28179686-28179705 | Msa0807320:intron | 25.0% |
| ! | TGAAAGAGATAAACAAGAAA+GGG | + | chr5_3:28180105-28180124 | Msa0807320:CDS | 25.0% |
| ! | GGAAAAAGGAATTAAAAATC+AGG | + | chr5_3:28180175-28180194 | Msa0807320:intron | 25.0% |
| !!! | TTTTTTCATTGTCTTTTGTG+GGG | - | chr5_3:28180216-28180235 | None:intergenic | 25.0% |
| ! | TAGATAGATAAACAAGCTTT+AGG | + | chr5_3:28180382-28180401 | Msa0807320:intron | 25.0% |
| !!! | TTTTGGGGATAAAATACATT+TGG | - | chr5_3:28180590-28180609 | None:intergenic | 25.0% |
| !! | AAATAGAGAACTTGTGTTTT+GGG | - | chr5_3:28180606-28180625 | None:intergenic | 25.0% |
| !! | AAAGCAATTTCACAGTATTT+TGG | + | chr5_3:28180688-28180707 | Msa0807320:intron | 25.0% |
| !! | AAGCAATTTCACAGTATTTT+GGG | + | chr5_3:28180689-28180708 | Msa0807320:intron | 25.0% |
| !!! | AAAAAATCAAGAATGGATTG+GGG | - | chr5_3:28180788-28180807 | None:intergenic | 25.0% |
| ! | GTAAAAAATCAAGAATGGAT+TGG | - | chr5_3:28180790-28180809 | None:intergenic | 25.0% |
| !!! | TTCTTCATTTTTGTTCATGT+AGG | + | chr5_3:28181293-28181312 | Msa0807320:intron | 25.0% |
| ! | TAGTTAGCAATTGTTCTATA+TGG | - | chr5_3:28181420-28181439 | None:intergenic | 25.0% |
| ! | ACAATTGCTAACTAGTTATT+TGG | + | chr5_3:28181426-28181445 | Msa0807320:intron | 25.0% |
| !! | CAATAACAGTAAAATTTGCT+GGG | - | chr5_3:28181475-28181494 | None:intergenic | 25.0% |
| ! | ATTCTTGTCTTAACATTTCT+TGG | + | chr5_3:28181614-28181633 | Msa0807320:intron | 25.0% |
| ! | ATCGAAATGTATCAACAAAA+TGG | - | chr5_3:28181673-28181692 | None:intergenic | 25.0% |
| ! | CCTCATTCTTTAATAGTTTA+GGG | + | chr5_3:28181790-28181809 | Msa0807320:intron | 25.0% |
| !! | TTAATAGTTTAGGGTGAAAT+AGG | + | chr5_3:28181799-28181818 | Msa0807320:intron | 25.0% |
| !! | TAATAGTTTAGGGTGAAATA+GGG | + | chr5_3:28181800-28181819 | Msa0807320:intron | 25.0% |
| !!! | TGAAATTTTTCAAGTTTGGT+TGG | - | chr5_3:28181911-28181930 | None:intergenic | 25.0% |
| ! | AACCAAACTTGAAAAATTTC+AGG | + | chr5_3:28181910-28181929 | Msa0807320:intron | 25.0% |
| !! | CAGATTGTAGATTAATTTGA+AGG | - | chr5_3:28181974-28181993 | None:intergenic | 25.0% |
| !! | TCTACAATCTGTTTGTTAAA+TGG | + | chr5_3:28181983-28182002 | Msa0807320:intron | 25.0% |
| !! | CTGTAATTACATGTTGATTA+CGG | + | chr5_3:28182358-28182377 | Msa0807320:intron | 25.0% |
| !! | AGAATTTTCCTTAATCTGTA+AGG | - | chr5_3:28182487-28182506 | None:intergenic | 25.0% |
| ! | CAGATTAAGGAAAATTCTAA+AGG | + | chr5_3:28182489-28182508 | Msa0807320:CDS | 25.0% |
| !! | TGTATGGAGTTAATTTCTTT+TGG | + | chr5_3:28182793-28182812 | Msa0807320:three_prime_UTR | 25.0% |
| !!! | TTTCTTTTGGTTGAAGTTTA+TGG | + | chr5_3:28182806-28182825 | Msa0807320:three_prime_UTR | 25.0% |
| ! | AAAATGATAAACCGTATAGA+TGG | - | chr5_3:28182940-28182959 | None:intergenic | 25.0% |
| !! | AAACTGAAGTTGAACAATTT+TGG | + | chr5_3:28183078-28183097 | Msa0807320:three_prime_UTR | 25.0% |
| GGGTATATTATTATATGGGT+TGG | - | chr5_3:28174172-28174191 | None:intergenic | 30.0% | |
| AGGACGTAAGAATAAAAGAA+AGG | - | chr5_3:28174352-28174371 | None:intergenic | 30.0% | |
| ! | TTTTATTCTTACGTCCTGTT+TGG | + | chr5_3:28174355-28174374 | Msa0807320:intron | 30.0% |
| !! | TCATAAAAAGTGCTTACATC+GGG | - | chr5_3:28174429-28174448 | None:intergenic | 30.0% |
| !! | GAGAATTTTGAAAATTGCAG+TGG | + | chr5_3:28174496-28174515 | Msa0807320:intron | 30.0% |
| ! | AACGACGTAAAATTTTCTGA+AGG | - | chr5_3:28174705-28174724 | None:intergenic | 30.0% |
| ! | AGAAAATTTTACGTCGTTGT+CGG | + | chr5_3:28174707-28174726 | Msa0807320:CDS | 30.0% |
| ATGACGAATAAATACAGTGA+AGG | + | chr5_3:28174753-28174772 | Msa0807320:CDS | 30.0% | |
| AGTATGTTGAATTATGGATC+TGG | + | chr5_3:28174808-28174827 | Msa0807320:intron | 30.0% | |
| !!! | GGTTATGATTGTTTTGTTTC+AGG | + | chr5_3:28174829-28174848 | Msa0807320:intron | 30.0% |
| TTTGATAAGGTACATTGACA+TGG | + | chr5_3:28174896-28174915 | Msa0807320:intron | 30.0% | |
| CTTTAGTCTCACAAAGAATT+TGG | + | chr5_3:28175022-28175041 | Msa0807320:intron | 30.0% | |
| AGACTAATATATCATGGAAG+TGG | - | chr5_3:28175104-28175123 | None:intergenic | 30.0% | |
| TTAATCAAGTACCTTCAATC+CGG | - | chr5_3:28175179-28175198 | None:intergenic | 30.0% | |
| TTGAATGTAATCACATGTGT+CGG | + | chr5_3:28175289-28175308 | Msa0807320:intron | 30.0% | |
| GAAACAAATACACTCTAATG+TGG | - | chr5_3:28175385-28175404 | None:intergenic | 30.0% | |
| ! | TAAGAGTGCATTTGACATAT+GGG | + | chr5_3:28175411-28175430 | Msa0807320:intron | 30.0% |
| ATGAAAAACAACATCACATG+TGG | + | chr5_3:28175438-28175457 | Msa0807320:intron | 30.0% | |
| !! | TGCATTTTGAAAACAGAACA+TGG | + | chr5_3:28175478-28175497 | Msa0807320:intron | 30.0% |
| CTGGAAATGATTACTATATC+AGG | - | chr5_3:28175609-28175628 | None:intergenic | 30.0% | |
| GAAACAAAAGTCACTCAAAA+TGG | - | chr5_3:28175643-28175662 | None:intergenic | 30.0% | |
| ! | AGACATCTGTTTTACAACAA+AGG | - | chr5_3:28175665-28175684 | None:intergenic | 30.0% |
| TCTCCACAACCATTATAAAA+GGG | - | chr5_3:28176124-28176143 | None:intergenic | 30.0% | |
| TTCTCCACAACCATTATAAA+AGG | - | chr5_3:28176125-28176144 | None:intergenic | 30.0% | |
| CAGTAAATCAATTCTTCACA+AGG | - | chr5_3:28176289-28176308 | None:intergenic | 30.0% | |
| ! | CTTGTGAAGAATTGATTTAC+TGG | + | chr5_3:28176287-28176306 | Msa0807320:intron | 30.0% |
| ! | TGAAGAATTGATTTACTGGA+GGG | + | chr5_3:28176291-28176310 | Msa0807320:intron | 30.0% |
| ! | TAACATACAGACAACTTTTC+TGG | + | chr5_3:28176352-28176371 | Msa0807320:intron | 30.0% |
| ! | ACTTGTGCTATTCTTACATT+AGG | + | chr5_3:28176520-28176539 | Msa0807320:intron | 30.0% |
| !! | TTTATTTTCCTCTGTAGTCT+AGG | + | chr5_3:28176546-28176565 | Msa0807320:intron | 30.0% |
| ! | ACTTGTGCTATTCTTACATT+AGG | + | chr5_3:28176520-28176539 | Msa0807320:intron | 30.0% |
| !! | TTTATTTTCCTCTGTAGTCT+AGG | + | chr5_3:28176546-28176565 | Msa0807320:intron | 30.0% |
| GTAAGACTCTTCAAAAACAT+AGG | - | chr5_3:28176640-28176659 | None:intergenic | 30.0% | |
| TCAATAAAGCAGTGTAAACT+TGG | - | chr5_3:28176726-28176745 | None:intergenic | 30.0% | |
| !! | CTTCTTTTGATTATCAGTTG+TGG | + | chr5_3:28176819-28176838 | Msa0807320:intron | 30.0% |
| ! | ATAGGAAGTATGAACAACTA+TGG | + | chr5_3:28177057-28177076 | Msa0807320:intron | 30.0% |
| ! | AGCCTTTTCCATAAATTATG+AGG | + | chr5_3:28177111-28177130 | Msa0807320:intron | 30.0% |
| ! | GCCTTTTCCATAAATTATGA+GGG | + | chr5_3:28177112-28177131 | Msa0807320:intron | 30.0% |
| TCCCTCATAATTTATGGAAA+AGG | - | chr5_3:28177116-28177135 | None:intergenic | 30.0% | |
| TCACAATTCACAAGTCTATT+GGG | - | chr5_3:28177173-28177192 | None:intergenic | 30.0% | |
| ATCACAATTCACAAGTCTAT+TGG | - | chr5_3:28177174-28177193 | None:intergenic | 30.0% | |
| GTATGTTATTAGATTGCTTC+TGG | - | chr5_3:28177277-28177296 | None:intergenic | 30.0% | |
| TTGTGAGTGAGGTAAAATTA+GGG | - | chr5_3:28177418-28177437 | None:intergenic | 30.0% | |
| ATTGTGAGTGAGGTAAAATT+AGG | - | chr5_3:28177419-28177438 | None:intergenic | 30.0% | |
| GAGAAAAAAAACTTCTGCAT+TGG | - | chr5_3:28177529-28177548 | None:intergenic | 30.0% | |
| ! | TTTTGCACAAGAAAATGACT+TGG | - | chr5_3:28177623-28177642 | None:intergenic | 30.0% |
| AATCTATAACTATGCATGGA+AGG | - | chr5_3:28178014-28178033 | None:intergenic | 30.0% | |
| ! | AATTTTCCATAAGAGGAACA+GGG | - | chr5_3:28178346-28178365 | None:intergenic | 30.0% |
| ! | GAAATCCAATTTTCCATAAG+AGG | - | chr5_3:28178353-28178372 | None:intergenic | 30.0% |
| AAAATTGGTTATATGACAGG+TGG | + | chr5_3:28178524-28178543 | Msa0807320:intron | 30.0% | |
| ! | GCAAAAACATTTAGGATAGT+TGG | + | chr5_3:28178617-28178636 | Msa0807320:intron | 30.0% |
| ! | ATAGTTGGTTCATGAAAAAC+TGG | + | chr5_3:28178632-28178651 | Msa0807320:intron | 30.0% |
| !!! | ATTTTAACTACCATGGCAAT+TGG | - | chr5_3:28179126-28179145 | None:intergenic | 30.0% |
| !!! | AATCGAGATTTTAACTACCA+TGG | - | chr5_3:28179133-28179152 | None:intergenic | 30.0% |
| AGTATACTCATAATTGCTGA+GGG | - | chr5_3:28179193-28179212 | None:intergenic | 30.0% | |
| AAAAGTAGAATATACAGGAG+AGG | - | chr5_3:28179238-28179257 | None:intergenic | 30.0% | |
| ! | TTGAAACGATTCTACGATTT+TGG | + | chr5_3:28179260-28179279 | Msa0807320:intron | 30.0% |
| TTATACAAAACTTAAAGGGG+TGG | - | chr5_3:28179669-28179688 | None:intergenic | 30.0% | |
| ACTTATCTAATATCTGCAGA+TGG | + | chr5_3:28179733-28179752 | Msa0807320:intron | 30.0% | |
| ACAACATCTGCATAATCAAA+AGG | - | chr5_3:28180020-28180039 | None:intergenic | 30.0% | |
| CTGAAAGAGATAAACAAGAA+AGG | + | chr5_3:28180104-28180123 | Msa0807320:CDS | 30.0% | |
| ! | TTTTTCATTGTCTTTTGTGG+GGG | - | chr5_3:28180215-28180234 | None:intergenic | 30.0% |
| TAACAACAGAAACAACTTCA+GGG | - | chr5_3:28180266-28180285 | None:intergenic | 30.0% | |
| !! | AGAAGTCTTCATTTTTGTGA+TGG | + | chr5_3:28180455-28180474 | Msa0807320:intron | 30.0% |
| !! | TCTTCATTTTTGTGATGGTA+AGG | + | chr5_3:28180460-28180479 | Msa0807320:intron | 30.0% |
| ATATGTGCCTTATGTTTCTT+GGG | + | chr5_3:28180493-28180512 | Msa0807320:intron | 30.0% | |
| AGTAAAACCCAAGAAACATA+AGG | - | chr5_3:28180503-28180522 | None:intergenic | 30.0% | |
| ! | AATAGAGAACTTGTGTTTTG+GGG | - | chr5_3:28180605-28180624 | None:intergenic | 30.0% |
| ! | CAAATAGAGAACTTGTGTTT+TGG | - | chr5_3:28180607-28180626 | None:intergenic | 30.0% |
| CACAATATCATGATTGACAT+CGG | - | chr5_3:28180825-28180844 | None:intergenic | 30.0% | |
| ! | GATTATCATTTGTTGAGTCT+TGG | + | chr5_3:28180848-28180867 | Msa0807320:intron | 30.0% |
| AAATCCATCAATTGGGTATA+TGG | + | chr5_3:28180927-28180946 | Msa0807320:intron | 30.0% | |
| AATCCATCAATTGGGTATAT+GGG | + | chr5_3:28180928-28180947 | Msa0807320:intron | 30.0% | |
| CACTTGAACAGAAATTTCAT+TGG | + | chr5_3:28181013-28181032 | Msa0807320:intron | 30.0% | |
| CTACGAAGACAAAATAAATC+AGG | + | chr5_3:28181066-28181085 | Msa0807320:CDS | 30.0% | |
| GACAACAAAATATGCACAAA+AGG | - | chr5_3:28181250-28181269 | None:intergenic | 30.0% | |
| !! | TTTGTGCATATTTTGTTGTC+TGG | + | chr5_3:28181250-28181269 | Msa0807320:intron | 30.0% |
| TTCTGGTAATTCTTGAATTC+CGG | - | chr5_3:28181327-28181346 | None:intergenic | 30.0% | |
| ! | AGTTACTAAGAACTTGTTTC+TGG | - | chr5_3:28181344-28181363 | None:intergenic | 30.0% |
| GCAATAACAGTAAAATTTGC+TGG | - | chr5_3:28181476-28181495 | None:intergenic | 30.0% | |
| TTAAGTTTACCAACACCAAA+TGG | - | chr5_3:28181574-28181593 | None:intergenic | 30.0% | |
| ! | GTTGGTAAACTTAAGAAACA+AGG | + | chr5_3:28181580-28181599 | Msa0807320:CDS | 30.0% |
| GCCTCATTCTTTAATAGTTT+AGG | + | chr5_3:28181789-28181808 | Msa0807320:intron | 30.0% | |
| CCCTAAACTATTAAAGAATG+AGG | - | chr5_3:28181793-28181812 | None:intergenic | 30.0% | |
| TCTGGAAAAACTAAAAAGGT+TGG | - | chr5_3:28181950-28181969 | None:intergenic | 30.0% | |
| !! | AGGTTCTGGAAAAACTAAAA+AGG | - | chr5_3:28181954-28181973 | None:intergenic | 30.0% |
| ! | GTAGATTAATTTGAAGGTTC+TGG | - | chr5_3:28181968-28181987 | None:intergenic | 30.0% |
| TAACAAGTGAAGATGATGTA+TGG | + | chr5_3:28182777-28182796 | Msa0807320:exon | 30.0% | |
| TCACCAAACACAAATCACAA+TGG | + | chr5_3:28174216-28174235 | Msa0807320:exon | 35.0% | |
| !! | CATAAAAAGTGCTTACATCG+GGG | - | chr5_3:28174428-28174447 | None:intergenic | 35.0% |
| TCGATTATATCTTCGATCTC+AGG | - | chr5_3:28174558-28174577 | None:intergenic | 35.0% | |
| AACTTGAAAAAGCTCGTCAA+TGG | + | chr5_3:28174577-28174596 | Msa0807320:CDS | 35.0% | |
| AAATACAGTGAAGGTTATCC+TGG | + | chr5_3:28174762-28174781 | Msa0807320:CDS | 35.0% | |
| TCAGGTTCAGAACTTTCTTA+TGG | + | chr5_3:28174847-28174866 | Msa0807320:intron | 35.0% | |
| CAGGTTCAGAACTTTCTTAT+GGG | + | chr5_3:28174848-28174867 | Msa0807320:intron | 35.0% | |
| CTTGTGTTTATTGCTAATCC+CGG | + | chr5_3:28175157-28175176 | Msa0807320:intron | 35.0% | |
| TAATCAAGTACCTTCAATCC+GGG | - | chr5_3:28175178-28175197 | None:intergenic | 35.0% | |
| ! | CTAAGAGTGCATTTGACATA+TGG | + | chr5_3:28175410-28175429 | Msa0807320:intron | 35.0% |
| ! | AAGAGTGCATTTGACATATG+GGG | + | chr5_3:28175412-28175431 | Msa0807320:intron | 35.0% |
| ! | TCACATGTGGTTCTATTCAA+TGG | + | chr5_3:28175451-28175470 | Msa0807320:intron | 35.0% |
| AAACAGAACATGGTAGATCT+TGG | + | chr5_3:28175488-28175507 | Msa0807320:intron | 35.0% | |
| AACAGAACATGGTAGATCTT+GGG | + | chr5_3:28175489-28175508 | Msa0807320:intron | 35.0% | |
| ! | TACCTCAGTTTCTCAGTTTT+TGG | + | chr5_3:28175818-28175837 | Msa0807320:intron | 35.0% |
| ! | CATCCCTTTTATAATGGTTG+TGG | + | chr5_3:28176118-28176137 | Msa0807320:intron | 35.0% |
| GTCAATATAATCATGCGTGA+TGG | + | chr5_3:28176188-28176207 | Msa0807320:intron | 35.0% | |
| ! | GTGAAGAATTGATTTACTGG+AGG | + | chr5_3:28176290-28176309 | Msa0807320:intron | 35.0% |
| GTGTAAACTTGGAAGTTAGA+AGG | - | chr5_3:28176715-28176734 | None:intergenic | 35.0% | |
| GAAACCTCATGAGAGAATTA+TGG | + | chr5_3:28176744-28176763 | Msa0807320:CDS | 35.0% | |
| ATTTACTCATCATGTCCTAG+TGG | - | chr5_3:28176894-28176913 | None:intergenic | 35.0% | |
| TCCATAAATTATGAGGGAGA+AGG | + | chr5_3:28177118-28177137 | Msa0807320:intron | 35.0% | |
| TCCTTCTCCCTCATAATTTA+TGG | - | chr5_3:28177122-28177141 | None:intergenic | 35.0% | |
| AATAAGATGACTCCTAACTC+CGG | + | chr5_3:28177378-28177397 | Msa0807320:intron | 35.0% | |
| TGTGAGTGAGGTAAAATTAG+GGG | - | chr5_3:28177417-28177436 | None:intergenic | 35.0% | |
| TAAGAGAATGAACTCGTAGA+TGG | - | chr5_3:28177456-28177475 | None:intergenic | 35.0% | |
| TAGTCCTTAGTTTATAGCCT+TGG | + | chr5_3:28177494-28177513 | Msa0807320:intron | 35.0% | |
| CTCCATGTTCTATGTCAAAA+TGG | + | chr5_3:28177548-28177567 | Msa0807320:intron | 35.0% | |
| !! | AGCCATTTTGACATAGAACA+TGG | - | chr5_3:28177553-28177572 | None:intergenic | 35.0% |
| ATGCCAAAATGATGCAATTC+CGG | + | chr5_3:28177655-28177674 | Msa0807320:intron | 35.0% | |
| ! | TTTCCGGAATTGCATCATTT+TGG | - | chr5_3:28177661-28177680 | None:intergenic | 35.0% |
| AGATACAGCTGATATCTTCT+TGG | - | chr5_3:28177789-28177808 | None:intergenic | 35.0% | |
| !! | TCTTTGAAACAATGCCATAC+AGG | + | chr5_3:28177813-28177832 | Msa0807320:CDS | 35.0% |
| ! | TGGTTATATTGACTATGACC+AGG | + | chr5_3:28177850-28177869 | Msa0807320:CDS | 35.0% |
| ! | TATATTGACTATGACCAGGT+AGG | + | chr5_3:28177854-28177873 | Msa0807320:intron | 35.0% |
| ! | ACCATTGTATTTCTGTGTTG+TGG | + | chr5_3:28177882-28177901 | Msa0807320:intron | 35.0% |
| TCCACAACACAGAAATACAA+TGG | - | chr5_3:28177886-28177905 | None:intergenic | 35.0% | |
| ATTAGCAAAGATAAAGGTGG+CGG | - | chr5_3:28177975-28177994 | None:intergenic | 35.0% | |
| CTCATTAGCAAAGATAAAGG+TGG | - | chr5_3:28177978-28177997 | None:intergenic | 35.0% | |
| GAGCTCATTAGCAAAGATAA+AGG | - | chr5_3:28177981-28178000 | None:intergenic | 35.0% | |
| ! | GATTGTATTGGCAGAGATTA+TGG | + | chr5_3:28178030-28178049 | Msa0807320:intron | 35.0% |
| CTACCATATGCCTTAACTAT+GGG | - | chr5_3:28178129-28178148 | None:intergenic | 35.0% | |
| CATAGTTAAGGCATATGGTA+GGG | + | chr5_3:28178128-28178147 | Msa0807320:intron | 35.0% | |
| ATGTGATGCAAAATCATCCA+TGG | + | chr5_3:28178256-28178275 | Msa0807320:intron | 35.0% | |
| AATCATCCATGGTTCATCAT+TGG | + | chr5_3:28178267-28178286 | Msa0807320:intron | 35.0% | |
| ATCATCCATGGTTCATCATT+GGG | + | chr5_3:28178268-28178287 | Msa0807320:intron | 35.0% | |
| ! | CAATTTTCCATAAGAGGAAC+AGG | - | chr5_3:28178347-28178366 | None:intergenic | 35.0% |
| CTGTTCCTCTTATGGAAAAT+TGG | + | chr5_3:28178345-28178364 | Msa0807320:intron | 35.0% | |
| TGAAAAACTGGTTATATGGC+AGG | + | chr5_3:28178644-28178663 | Msa0807320:intron | 35.0% | |
| !! | AATGGATTAAGAGAAGAGTG+TGG | + | chr5_3:28178704-28178723 | Msa0807320:intron | 35.0% |
| AAAAAAGGAAAGATGCCTCT+TGG | - | chr5_3:28178824-28178843 | None:intergenic | 35.0% | |
| !!! | AAGAGGCATCTTTCCTTTTT+TGG | + | chr5_3:28178823-28178842 | Msa0807320:intron | 35.0% |
| !! | CATTTTCCCTAATTCTAGGA+GGG | + | chr5_3:28178859-28178878 | Msa0807320:intron | 35.0% |
| TTAGCATTACAAGTTCCAGT+TGG | + | chr5_3:28178900-28178919 | Msa0807320:intron | 35.0% | |
| GAGTATACTCATAATTGCTG+AGG | - | chr5_3:28179194-28179213 | None:intergenic | 35.0% | |
| !!! | AGAAAAGTGCTGCACTTTTT+AGG | + | chr5_3:28179756-28179775 | Msa0807320:CDS | 35.0% |
| AGGCCAAAATTAATAGTTGC+CGG | + | chr5_3:28179776-28179795 | Msa0807320:CDS | 35.0% | |
| TACGCGCATAATCATAAAGA+CGG | - | chr5_3:28179817-28179836 | None:intergenic | 35.0% | |
| TTAGGTCTGTGATAAACAGA+AGG | + | chr5_3:28179932-28179951 | Msa0807320:intron | 35.0% | |
| TCTGCATAATCAAAAGGAGA+AGG | - | chr5_3:28180014-28180033 | None:intergenic | 35.0% | |
| GCTATGATATTCTTCAGGAA+GGG | + | chr5_3:28180080-28180099 | Msa0807320:CDS | 35.0% | |
| GTAACAACAGAAACAACTTC+AGG | - | chr5_3:28180267-28180286 | None:intergenic | 35.0% | |
| AGCTTTCCGATAGTTAAAGT+AGG | + | chr5_3:28180345-28180364 | Msa0807320:intron | 35.0% | |
| CATATGTGCCTTATGTTTCT+TGG | + | chr5_3:28180492-28180511 | Msa0807320:intron | 35.0% | |
| TTCACTGAAAATCAACTGTG+AGG | + | chr5_3:28180537-28180556 | Msa0807320:intron | 35.0% | |
| TCACTGAAAATCAACTGTGA+GGG | + | chr5_3:28180538-28180557 | Msa0807320:intron | 35.0% | |
| ! | GTTAGTTTAACCCCAAAAGT+TGG | - | chr5_3:28180766-28180785 | None:intergenic | 35.0% |
| !!! | ATAAATCAGGCTGTTTTTCC+TGG | + | chr5_3:28181079-28181098 | Msa0807320:CDS | 35.0% |
| !!! | TAAATCAGGCTGTTTTTCCT+GGG | + | chr5_3:28181080-28181099 | Msa0807320:CDS | 35.0% |
| AAATGCAAGCTCAGCATATA+TGG | - | chr5_3:28181717-28181736 | None:intergenic | 35.0% | |
| CAATGTGACTTATAGTGACT+AGG | + | chr5_3:28181825-28181844 | Msa0807320:intron | 35.0% | |
| ! | TCAAGTTTGGTTGGTATAGT+AGG | - | chr5_3:28181902-28181921 | None:intergenic | 35.0% |
| !!! | GGCCTGAAATTTTTCAAGTT+TGG | - | chr5_3:28181915-28181934 | None:intergenic | 35.0% |
| AAAGGTTGGACAAGTCTTTA+AGG | - | chr5_3:28181936-28181955 | None:intergenic | 35.0% | |
| ACAAATGGAACAGCATAAGA+CGG | - | chr5_3:28182179-28182198 | None:intergenic | 35.0% | |
| TTATGCTGTTCCATTTGTCA+GGG | + | chr5_3:28182181-28182200 | Msa0807320:intron | 35.0% | |
| !! | TCCTGGAACAGTGTTTTTAT+TGG | - | chr5_3:28182257-28182276 | None:intergenic | 35.0% |
| CGGTTATGTCTTTATGATTC+AGG | + | chr5_3:28182378-28182397 | Msa0807320:intron | 35.0% | |
| CAGAATTGCCTTACAGATTA+AGG | + | chr5_3:28182476-28182495 | Msa0807320:CDS | 35.0% | |
| !! | GCAGTTCTGAATGTATAACA+AGG | + | chr5_3:28182561-28182580 | Msa0807320:intron | 35.0% |
| AAATTCAGGCACAAAGTTGA+AGG | + | chr5_3:28182630-28182649 | Msa0807320:intron | 35.0% | |
| ! | CACAAAGTTGAAGGATTTTG+TGG | + | chr5_3:28182639-28182658 | Msa0807320:CDS | 35.0% |
| TAGCATAACCTTCTACTTCA+CGG | - | chr5_3:28182714-28182733 | None:intergenic | 35.0% | |
| TGCTGAAAATATTCGTACTC+TGG | + | chr5_3:28182840-28182859 | Msa0807320:three_prime_UTR | 35.0% | |
| AAATATTCGTACTCTGGTCT+TGG | + | chr5_3:28182846-28182865 | Msa0807320:three_prime_UTR | 35.0% | |
| ! | TTGTGTTTGGTGAATTGCGT+TGG | - | chr5_3:28174209-28174228 | None:intergenic | 40.0% |
| ! | TGGCCATTGTGATTTGTGTT+TGG | - | chr5_3:28174222-28174241 | None:intergenic | 40.0% |
| AACACAAATCACAATGGCCA+TGG | + | chr5_3:28174222-28174241 | Msa0807320:exon | 40.0% | |
| !! | AGAAGTTGGTTTGTTGATGG+TGG | - | chr5_3:28174266-28174285 | None:intergenic | 40.0% |
| !! | GAGAGAAGTTGGTTTGTTGA+TGG | - | chr5_3:28174269-28174288 | None:intergenic | 40.0% |
| AGATTTGTGAGTCTGTTGAG+CGG | - | chr5_3:28174403-28174422 | None:intergenic | 40.0% | |
| TGAAAAAGCTCGTCAATGGA+AGG | + | chr5_3:28174581-28174600 | Msa0807320:CDS | 40.0% | |
| ! | TATCCTGGTGCTAGATACTA+TGG | + | chr5_3:28174777-28174796 | Msa0807320:CDS | 40.0% |
| TATTGCTAATCCCGGATTGA+AGG | + | chr5_3:28175165-28175184 | Msa0807320:intron | 40.0% | |
| ! | TCACGTGTCATTATCGTATC+CGG | - | chr5_3:28175239-28175258 | None:intergenic | 40.0% |
| AGAGTGCATTTGACATATGG+GGG | + | chr5_3:28175413-28175432 | Msa0807320:intron | 40.0% | |
| ACAGAACATGGTAGATCTTG+GGG | + | chr5_3:28175490-28175509 | Msa0807320:intron | 40.0% | |
| CAAAATGGTCATCTGAACAC+TGG | - | chr5_3:28175628-28175647 | None:intergenic | 40.0% | |
| CACCAAAAACTGAGAAACTG+AGG | - | chr5_3:28175823-28175842 | None:intergenic | 40.0% | |
| TAGCCTGTTGAACACTTATG+TGG | + | chr5_3:28175881-28175900 | Msa0807320:intron | 40.0% | |
| TCACCACATAAGTGTTCAAC+AGG | - | chr5_3:28175887-28175906 | None:intergenic | 40.0% | |
| CACTTATGTGGTGAACTTTC+TGG | + | chr5_3:28175893-28175912 | Msa0807320:intron | 40.0% | |
| TAGCCTGTTGAACACTAATG+TGG | + | chr5_3:28175967-28175986 | Msa0807320:intron | 40.0% | |
| TCACCACATTAGTGTTCAAC+AGG | - | chr5_3:28175973-28175992 | None:intergenic | 40.0% | |
| AAAACTGACGATTACAGCAG+GGG | - | chr5_3:28176230-28176249 | None:intergenic | 40.0% | |
| GAAAACTGACGATTACAGCA+GGG | - | chr5_3:28176231-28176250 | None:intergenic | 40.0% | |
| TCAAACGTAGTCTTTCTCTG+CGG | + | chr5_3:28176389-28176408 | Msa0807320:intron | 40.0% | |
| TAACATCCTTGTTGCTCTGT+TGG | + | chr5_3:28176470-28176489 | Msa0807320:intron | 40.0% | |
| AACATCCTTGTTGCTCTGTT+GGG | + | chr5_3:28176471-28176490 | Msa0807320:intron | 40.0% | |
| AATTACCCAACAGAGCAACA+AGG | - | chr5_3:28176479-28176498 | None:intergenic | 40.0% | |
| ATTGTTGACCTAGACTACAG+AGG | - | chr5_3:28176609-28176628 | None:intergenic | 40.0% | |
| GTCAATGTGCAGTCATTATC+TGG | + | chr5_3:28176685-28176704 | Msa0807320:intron | 40.0% | |
| AGTGCCATAATTCTCTCATG+AGG | - | chr5_3:28176751-28176770 | None:intergenic | 40.0% | |
| GCATCTATCACATGGATATC+AGG | + | chr5_3:28176789-28176808 | Msa0807320:CDS | 40.0% | |
| TTTCTATGGTTGGCAACTCA+TGG | - | chr5_3:28176860-28176879 | None:intergenic | 40.0% | |
| AGTTGCCAACCATAGAAAGT+CGG | + | chr5_3:28176862-28176881 | Msa0807320:intron | 40.0% | |
| AATTCACAAGTCTATTGGGC+TGG | - | chr5_3:28177169-28177188 | None:intergenic | 40.0% | |
| CCTACCAAGGCTATAAACTA+AGG | - | chr5_3:28177501-28177520 | None:intergenic | 40.0% | |
| ! | CCTTAGTTTATAGCCTTGGT+AGG | + | chr5_3:28177498-28177517 | Msa0807320:intron | 40.0% |
| TGAAACAATGCCATACAGGT+TGG | + | chr5_3:28177817-28177836 | Msa0807320:CDS | 40.0% | |
| CCTACCATATGCCTTAACTA+TGG | - | chr5_3:28178130-28178149 | None:intergenic | 40.0% | |
| CCATAGTTAAGGCATATGGT+AGG | + | chr5_3:28178127-28178146 | Msa0807320:intron | 40.0% | |
| ATATGGTAGGGAGAAAGGAA+TGG | + | chr5_3:28178140-28178159 | Msa0807320:intron | 40.0% | |
| TTGCATCACATCTCTAACGA+AGG | - | chr5_3:28178247-28178266 | None:intergenic | 40.0% | |
| TGGATTTCAGCACACAATGT+AGG | + | chr5_3:28178365-28178384 | Msa0807320:intron | 40.0% | |
| GGATTTCAGCACACAATGTA+GGG | + | chr5_3:28178366-28178385 | Msa0807320:intron | 40.0% | |
| TGCTCTTTGGACTTGAAACA+GGG | - | chr5_3:28178407-28178426 | None:intergenic | 40.0% | |
| !! | TTTCAAGTCCAAAGAGCACT+TGG | + | chr5_3:28178409-28178428 | Msa0807320:intron | 40.0% |
| TATATGACAGGTGGTAACAG+AGG | + | chr5_3:28178533-28178552 | Msa0807320:intron | 40.0% | |
| ATATGACAGGTGGTAACAGA+GGG | + | chr5_3:28178534-28178553 | Msa0807320:intron | 40.0% | |
| AAAACTGGTTATATGGCAGG+TGG | + | chr5_3:28178647-28178666 | Msa0807320:intron | 40.0% | |
| AAGGAAAGAGACCTGCATAT+AGG | - | chr5_3:28178790-28178809 | None:intergenic | 40.0% | |
| GAATTAGGGAAAATGCCTCT+TGG | - | chr5_3:28178854-28178873 | None:intergenic | 40.0% | |
| !! | GAGGCATTTTCCCTAATTCT+AGG | + | chr5_3:28178855-28178874 | Msa0807320:intron | 40.0% |
| ! | GCATTTTCCCTAATTCTAGG+AGG | + | chr5_3:28178858-28178877 | Msa0807320:intron | 40.0% |
| GAATCTCCCTCCTAGAATTA+GGG | - | chr5_3:28178868-28178887 | None:intergenic | 40.0% | |
| TGAATCTCCCTCCTAGAATT+AGG | - | chr5_3:28178869-28178888 | None:intergenic | 40.0% | |
| TACCATGGCAATTGGTACTA+AGG | - | chr5_3:28179118-28179137 | None:intergenic | 40.0% | |
| !! | TGGTGGTGGAACTACAAAAA+AGG | + | chr5_3:28179286-28179305 | Msa0807320:intron | 40.0% |
| GTGGCAATAAACTACTAGTC+TGG | - | chr5_3:28179650-28179669 | None:intergenic | 40.0% | |
| !! | GCACCGGCAACTATTAATTT+TGG | - | chr5_3:28179782-28179801 | None:intergenic | 40.0% |
| ACGCGCATAATCATAAAGAC+GGG | - | chr5_3:28179816-28179835 | None:intergenic | 40.0% | |
| GGCAGTTATGTTAGCTGATA+TGG | + | chr5_3:28179953-28179972 | Msa0807320:CDS | 40.0% | |
| ACGAAGTGACTTATGTGTTG+TGG | - | chr5_3:28180048-28180067 | None:intergenic | 40.0% | |
| ACAACACATAAGTCACTTCG+TGG | + | chr5_3:28180047-28180066 | Msa0807320:CDS | 40.0% | |
| CAACACATAAGTCACTTCGT+GGG | + | chr5_3:28180048-28180067 | Msa0807320:CDS | 40.0% | |
| GGCTATGATATTCTTCAGGA+AGG | + | chr5_3:28180079-28180098 | Msa0807320:CDS | 40.0% | |
| AGAGATAAACAAGAAAGGGC+AGG | + | chr5_3:28180109-28180128 | Msa0807320:CDS | 40.0% | |
| AGAAACAACTTCAGGGAAGT+TGG | - | chr5_3:28180259-28180278 | None:intergenic | 40.0% | |
| CACTGAAAATCAACTGTGAG+GGG | + | chr5_3:28180539-28180558 | Msa0807320:intron | 40.0% | |
| GCTTGAGTATACATCAGATG+TGG | - | chr5_3:28180726-28180745 | None:intergenic | 40.0% | |
| ! | TCGTCATTTGAGCCAACTTT+TGG | + | chr5_3:28180751-28180770 | Msa0807320:intron | 40.0% |
| ! | CGTCATTTGAGCCAACTTTT+GGG | + | chr5_3:28180752-28180771 | Msa0807320:intron | 40.0% |
| ! | GTCATTTGAGCCAACTTTTG+GGG | + | chr5_3:28180753-28180772 | Msa0807320:intron | 40.0% |
| AAGAGTCAAGACTGGACATA+TGG | - | chr5_3:28180886-28180905 | None:intergenic | 40.0% | |
| ! | TCTTGACTCTTGAAGGTGTA+GGG | + | chr5_3:28180895-28180914 | Msa0807320:intron | 40.0% |
| TTGCCCATATACCCAATTGA+TGG | - | chr5_3:28180934-28180953 | None:intergenic | 40.0% | |
| ! | TATATGGGCAAAGCAGCTTT+TGG | + | chr5_3:28180943-28180962 | Msa0807320:intron | 40.0% |
| ! | ATATGGGCAAAGCAGCTTTT+GGG | + | chr5_3:28180944-28180963 | Msa0807320:intron | 40.0% |
| CCTGTAATAGTGTGATTGTG+AGG | - | chr5_3:28181118-28181137 | None:intergenic | 40.0% | |
| CCTCACAATCACACTATTAC+AGG | + | chr5_3:28181115-28181134 | Msa0807320:CDS | 40.0% | |
| AAAGGCTATGACCTTGTATC+TGG | + | chr5_3:28181536-28181555 | Msa0807320:CDS | 40.0% | |
| !! | AACTGAGAACCATTTGGTGT+TGG | + | chr5_3:28181562-28181581 | Msa0807320:CDS | 40.0% |
| ATGCTGAGCTTGCATTTACA+TGG | + | chr5_3:28181720-28181739 | Msa0807320:intron | 40.0% | |
| CTTATGCTGTTCCATTTGTC+AGG | + | chr5_3:28182180-28182199 | Msa0807320:intron | 40.0% | |
| GCCAATAAAAACACTGTTCC+AGG | + | chr5_3:28182253-28182272 | Msa0807320:CDS | 40.0% | |
| AACTCCTGCTCTTACATCTA+GGG | + | chr5_3:28182401-28182420 | Msa0807320:CDS | 40.0% | |
| !!! | TACATCTAGGGGTTTTGTTG+AGG | + | chr5_3:28182413-28182432 | Msa0807320:CDS | 40.0% |
| AGTAGCTGAATACTTTGACG+CGG | + | chr5_3:28182449-28182468 | Msa0807320:CDS | 40.0% | |
| GTATCTTGACTCACTTATGC+TGG | + | chr5_3:28182583-28182602 | Msa0807320:intron | 40.0% | |
| ! | GAAGGATTTTGTGGAAGCTA+TGG | + | chr5_3:28182648-28182667 | Msa0807320:CDS | 40.0% |
| CTAAGCAGTTTCCCACAATT+GGG | + | chr5_3:28182731-28182750 | Msa0807320:CDS | 40.0% | |
| TCTATCTCGAACCCAATTGT+GGG | - | chr5_3:28182745-28182764 | None:intergenic | 40.0% | |
| AGAATGGTCAAGTGCAGAAA+AGG | + | chr5_3:28182893-28182912 | Msa0807320:three_prime_UTR | 40.0% | |
| GAATGGTCAAGTGCAGAAAA+GGG | + | chr5_3:28182894-28182913 | Msa0807320:three_prime_UTR | 40.0% | |
| !! | ATTATATGGGTTGGCGGTAG+TGG | - | chr5_3:28174163-28174182 | None:intergenic | 45.0% |
| ! | TGTTTGGTGAATTGCGTTGG+AGG | - | chr5_3:28174206-28174225 | None:intergenic | 45.0% |
| ACCAACTTCTCTCTATCGCT+TGG | + | chr5_3:28174276-28174295 | Msa0807320:CDS | 45.0% | |
| ACCAAGCGATAGAGAGAAGT+TGG | - | chr5_3:28174280-28174299 | None:intergenic | 45.0% | |
| GATGACTGCAACAACCAAAC+AGG | - | chr5_3:28174372-28174391 | None:intergenic | 45.0% | |
| AAACAGCTCAACGATCCTCT+TGG | + | chr5_3:28174522-28174541 | Msa0807320:CDS | 45.0% | |
| ! | TTTGTGTCAGAAGCGTGCAT+TGG | + | chr5_3:28174926-28174945 | Msa0807320:CDS | 45.0% |
| ! | AAGCGTGCATTGGAAGCTTT+TGG | + | chr5_3:28174936-28174955 | Msa0807320:CDS | 45.0% |
| ! | AGCGTGCATTGGAAGCTTTT+GGG | + | chr5_3:28174937-28174956 | Msa0807320:CDS | 45.0% |
| !! | TGCATTGGAAGCTTTTGGGT+TGG | + | chr5_3:28174941-28174960 | Msa0807320:CDS | 45.0% |
| ATCGACACAAACACAGACAC+CGG | + | chr5_3:28175217-28175236 | Msa0807320:intron | 45.0% | |
| ATGCCTTTGATTGGCAGTGT+CGG | + | chr5_3:28175338-28175357 | Msa0807320:intron | 45.0% | |
| GAGTGCATTTGACATATGGG+GGG | + | chr5_3:28175414-28175433 | Msa0807320:intron | 45.0% | |
| GGAAAACTGACGATTACAGC+AGG | - | chr5_3:28176232-28176251 | None:intergenic | 45.0% | |
| CAAGTTCACCTAGACTACAG+AGG | - | chr5_3:28176557-28176576 | None:intergenic | 45.0% | |
| ATGTGATAGATGCCCACCAT+GGG | - | chr5_3:28176782-28176801 | None:intergenic | 45.0% | |
| !! | TAGTGCCGACTTTCTATGGT+TGG | - | chr5_3:28176870-28176889 | None:intergenic | 45.0% |
| GCAAGGAAAGATTGTGAGTG+AGG | - | chr5_3:28177429-28177448 | None:intergenic | 45.0% | |
| AACTCGTAGATGGCATTGCA+AGG | - | chr5_3:28177446-28177465 | None:intergenic | 45.0% | |
| GCTCCCATAGTTAAGGCATA+TGG | + | chr5_3:28178123-28178142 | Msa0807320:intron | 45.0% | |
| AAGGCATATGGTAGGGAGAA+AGG | + | chr5_3:28178135-28178154 | Msa0807320:intron | 45.0% | |
| TTGAGAAACTCGTGTGAGCA+TGG | + | chr5_3:28178173-28178192 | Msa0807320:intron | 45.0% | |
| GTGCTCTTTGGACTTGAAAC+AGG | - | chr5_3:28178408-28178427 | None:intergenic | 45.0% | |
| ATCCTCATCCAAGTGCTCTT+TGG | - | chr5_3:28178420-28178439 | None:intergenic | 45.0% | |
| TATGACAGGTGGTAACAGAG+GGG | + | chr5_3:28178535-28178554 | Msa0807320:intron | 45.0% | |
| TGGTAACAGAGGGGAGAATT+GGG | + | chr5_3:28178544-28178563 | Msa0807320:intron | 45.0% | |
| TGGGTTGTGGGAAGGAATTA+TGG | + | chr5_3:28178563-28178582 | Msa0807320:intron | 45.0% | |
| TATATGGCAGGTGGTAACAG+AGG | + | chr5_3:28178656-28178675 | Msa0807320:intron | 45.0% | |
| ATATGGCAGGTGGTAACAGA+GGG | + | chr5_3:28178657-28178676 | Msa0807320:intron | 45.0% | |
| TGGTAACAGAGGGGAGAATT+GGG | + | chr5_3:28178544-28178563 | Msa0807320:intron | 45.0% | |
| GCTCAGCAAAACCTATATGC+AGG | + | chr5_3:28178776-28178795 | Msa0807320:intron | 45.0% | |
| CCTCTTGGTTGCACCAAAAA+AGG | - | chr5_3:28178839-28178858 | None:intergenic | 45.0% | |
| !!! | CCTTTTTTGGTGCAACCAAG+AGG | + | chr5_3:28178836-28178855 | Msa0807320:intron | 45.0% |
| CACCTTAGTACCAATTGCCA+TGG | + | chr5_3:28179113-28179132 | Msa0807320:intron | 45.0% | |
| !! | CGATTCTACGATTTTGGTCG+TGG | + | chr5_3:28179266-28179285 | Msa0807320:intron | 45.0% |
| !! | TTCTACGATTTTGGTCGTGG+TGG | + | chr5_3:28179269-28179288 | Msa0807320:intron | 45.0% |
| TGATTATGCGCGTATTCGCA+AGG | + | chr5_3:28179823-28179842 | Msa0807320:CDS | 45.0% | |
| !! | ATCAGTGGATTAGTTGCTGC+AGG | + | chr5_3:28179981-28180000 | Msa0807320:CDS | 45.0% |
| AAGAATATCATAGCCCCACG+TGG | - | chr5_3:28180074-28180093 | None:intergenic | 45.0% | |
| GTGGGGCTATGATATTCTTC+AGG | + | chr5_3:28180075-28180094 | Msa0807320:CDS | 45.0% | |
| ! | ATTGTCTTTTGTGGGGGATG+GGG | - | chr5_3:28180209-28180228 | None:intergenic | 45.0% |
| ! | CATTGTCTTTTGTGGGGGAT+GGG | - | chr5_3:28180210-28180229 | None:intergenic | 45.0% |
| ! | TCATTGTCTTTTGTGGGGGA+TGG | - | chr5_3:28180211-28180230 | None:intergenic | 45.0% |
| TGTCCAGTCTTGACTCTTGA+AGG | + | chr5_3:28180888-28180907 | Msa0807320:intron | 45.0% | |
| ACACCTTCAAGAGTCAAGAC+TGG | - | chr5_3:28180894-28180913 | None:intergenic | 45.0% | |
| ! | GTCTTGACTCTTGAAGGTGT+AGG | + | chr5_3:28180894-28180913 | Msa0807320:intron | 45.0% |
| ! | TATGGGCAAAGCAGCTTTTG+GGG | + | chr5_3:28180945-28180964 | Msa0807320:intron | 45.0% |
| TGGCTCAATTTCATCCTGAC+AGG | + | chr5_3:28181033-28181052 | Msa0807320:intron | 45.0% | |
| CTTAGCAGTTGCATTGAAGC+AGG | + | chr5_3:28181138-28181157 | Msa0807320:CDS | 45.0% | |
| GTTCATGTAGGCTATGACAC+CGG | + | chr5_3:28181305-28181324 | Msa0807320:intron | 45.0% | |
| TAACTCCTCGACATTTGCAC+AGG | + | chr5_3:28181359-28181378 | Msa0807320:CDS | 45.0% | |
| GTTTACCTGTGCAAATGTCG+AGG | - | chr5_3:28181367-28181386 | None:intergenic | 45.0% | |
| !! | CTGCAGAGCTTGTTAGAGAA+AGG | + | chr5_3:28181518-28181537 | Msa0807320:intron | 45.0% |
| TCTCAGTTCCACCAGATACA+AGG | - | chr5_3:28181550-28181569 | None:intergenic | 45.0% | |
| TGGTGGAACTGAGAACCATT+TGG | + | chr5_3:28181556-28181575 | Msa0807320:CDS | 45.0% | |
| !! | TCCATTTGTCAGGGCATTGA+TGG | + | chr5_3:28182190-28182209 | Msa0807320:intron | 45.0% |
| AGATGTGTCTGCAATGGTTC+CGG | + | chr5_3:28182276-28182295 | Msa0807320:CDS | 45.0% | |
| GAACTCCTGCTCTTACATCT+AGG | + | chr5_3:28182400-28182419 | Msa0807320:CDS | 45.0% | |
| ACTCCTGCTCTTACATCTAG+GGG | + | chr5_3:28182402-28182421 | Msa0807320:CDS | 45.0% | |
| AAACCCCTAGATGTAAGAGC+AGG | - | chr5_3:28182408-28182427 | None:intergenic | 45.0% | |
| CATAACCTTCTACTTCACGG+CGG | - | chr5_3:28182711-28182730 | None:intergenic | 45.0% | |
| GCTAAGCAGTTTCCCACAAT+TGG | + | chr5_3:28182730-28182749 | Msa0807320:CDS | 45.0% | |
| CTCTATCTCGAACCCAATTG+TGG | - | chr5_3:28182746-28182765 | None:intergenic | 45.0% | |
| !!! | TTTTTAAAGAAAATAATTAT+GGG | + | chr5_3:28181851-28181870 | Msa0807320:intron | 5.0% |
| TGGTGAATTGCGTTGGAGGT+TGG | - | chr5_3:28174202-28174221 | None:intergenic | 50.0% | |
| ! | CAACGATCCTCTTGGTGTAG+TGG | + | chr5_3:28174530-28174549 | Msa0807320:CDS | 50.0% |
| TCAGGATCCACTACACCAAG+AGG | - | chr5_3:28174540-28174559 | None:intergenic | 50.0% | |
| CCACCATAGTATCTAGCACC+AGG | - | chr5_3:28174783-28174802 | None:intergenic | 50.0% | |
| ! | CCTGGTGCTAGATACTATGG+TGG | + | chr5_3:28174780-28174799 | Msa0807320:CDS | 50.0% |
| !! | TTGGGTTGGATCCAGCACAA+TGG | + | chr5_3:28174955-28174974 | Msa0807320:CDS | 50.0% |
| ! | TGGGTTGGATCCAGCACAAT+GGG | + | chr5_3:28174956-28174975 | Msa0807320:CDS | 50.0% |
| TATGTACCTCCCCATTGTGC+TGG | - | chr5_3:28174969-28174988 | None:intergenic | 50.0% | |
| !! | TGTCGGTGTAGTGTCGATGA+CGG | + | chr5_3:28175306-28175325 | Msa0807320:intron | 50.0% |
| ACACCGGACATGCCTTTGAT+TGG | + | chr5_3:28175329-28175348 | Msa0807320:intron | 50.0% | |
| ! | CTGCCAATCAAAGGCATGTC+CGG | - | chr5_3:28175335-28175354 | None:intergenic | 50.0% |
| TGTGATAGATGCCCACCATG+GGG | - | chr5_3:28176781-28176800 | None:intergenic | 50.0% | |
| CATGTGATAGATGCCCACCA+TGG | - | chr5_3:28176783-28176802 | None:intergenic | 50.0% | |
| !! | CATGGTGGGCATCTATCACA+TGG | + | chr5_3:28176781-28176800 | Msa0807320:CDS | 50.0% |
| !! | TGGCTAGTGCCGACTTTCTA+TGG | - | chr5_3:28176874-28176893 | None:intergenic | 50.0% |
| AGTAGGCACTCACACGTGAT+TGG | + | chr5_3:28176924-28176943 | Msa0807320:intron | 50.0% | |
| TGTGTGTGTGTGCGCTCTAT+TGG | - | chr5_3:28177299-28177318 | None:intergenic | 50.0% | |
| CTTTCAGTGAGACCGGAGTT+AGG | - | chr5_3:28177393-28177412 | None:intergenic | 50.0% | |
| TAGGGGTCTTTCAGTGAGAC+CGG | - | chr5_3:28177400-28177419 | None:intergenic | 50.0% | |
| !! | TGCATTGGCTTAGCCTACCA+AGG | - | chr5_3:28177514-28177533 | None:intergenic | 50.0% |
| GTGCTCTCATCCAACCTGTA+TGG | - | chr5_3:28177830-28177849 | None:intergenic | 50.0% | |
| ! | TACAGGTTGGATGAGAGCAC+TGG | + | chr5_3:28177830-28177849 | Msa0807320:CDS | 50.0% |
| TTGACTATGACCAGGTAGGC+AGG | + | chr5_3:28177858-28177877 | Msa0807320:intron | 50.0% | |
| TACAATGGTACCTGCCTACC+TGG | - | chr5_3:28177871-28177890 | None:intergenic | 50.0% | |
| CCTTAACTATGGGAGCAGCT+TGG | - | chr5_3:28178119-28178138 | None:intergenic | 50.0% | |
| CCAAGCTGCTCCCATAGTTA+AGG | + | chr5_3:28178116-28178135 | Msa0807320:intron | 50.0% | |
| AGAAACTCGTGTGAGCATGG+AGG | + | chr5_3:28178176-28178195 | Msa0807320:intron | 50.0% | |
| GGTTTGTCATCAGCTCGTTG+TGG | + | chr5_3:28178202-28178221 | Msa0807320:intron | 50.0% | |
| CGTGTCCCAATGATGAACCA+TGG | - | chr5_3:28178276-28178295 | None:intergenic | 50.0% | |
| TAAGAGGAACAGGGACGACA+AGG | - | chr5_3:28178337-28178356 | None:intergenic | 50.0% | |
| TGTCGTCCCTGTTCCTCTTA+TGG | + | chr5_3:28178337-28178356 | Msa0807320:intron | 50.0% | |
| !! | GTCCAAAGAGCACTTGGATG+AGG | + | chr5_3:28178415-28178434 | Msa0807320:intron | 50.0% |
| GTGGTAACAGAGGGGAGAAT+TGG | + | chr5_3:28178543-28178562 | Msa0807320:intron | 50.0% | |
| ! | AGAGGGGAGAATTGGGTTGT+GGG | + | chr5_3:28178551-28178570 | Msa0807320:intron | 50.0% |
| TATGGCAGGTGGTAACAGAG+GGG | + | chr5_3:28178658-28178677 | Msa0807320:intron | 50.0% | |
| GTGGTAACAGAGGGGAGAAT+TGG | + | chr5_3:28178543-28178562 | Msa0807320:intron | 50.0% | |
| ! | AGAGGGGAGAATTGGGTTGT+GGG | + | chr5_3:28178551-28178570 | Msa0807320:intron | 50.0% |
| ! | GGAGAATTGGGTTGTGGGAA+GGG | + | chr5_3:28178556-28178575 | Msa0807320:intron | 50.0% |
| TGGGTTGTGGGAAGGGATAA+TGG | + | chr5_3:28178686-28178705 | Msa0807320:intron | 50.0% | |
| !! | TACGATTTTGGTCGTGGTGG+TGG | + | chr5_3:28179272-28179291 | Msa0807320:intron | 50.0% |
| GCTGATATGGCACACATCAG+TGG | + | chr5_3:28179966-28179985 | Msa0807320:CDS | 50.0% | |
| ! | TTGTCTTTTGTGGGGGATGG+GGG | - | chr5_3:28180208-28180227 | None:intergenic | 50.0% |
| TCAACTGTGAGGGGCAAGAA+AGG | + | chr5_3:28180548-28180567 | Msa0807320:intron | 50.0% | |
| CAACTGTGAGGGGCAAGAAA+GGG | + | chr5_3:28180549-28180568 | Msa0807320:intron | 50.0% | |
| !!! | GCAGCTTTTGGGGTTGAGTT+AGG | + | chr5_3:28180955-28180974 | Msa0807320:intron | 50.0% |
| GTAGTCATACAGCACCTGTC+AGG | - | chr5_3:28181050-28181069 | None:intergenic | 50.0% | |
| !!! | GCTGTTTTTCCTGGGCTTCA+AGG | + | chr5_3:28181088-28181107 | Msa0807320:CDS | 50.0% |
| ! | GTTTTTCCTGGGCTTCAAGG+TGG | + | chr5_3:28181091-28181110 | Msa0807320:CDS | 50.0% |
| GGCTATGACCTTGTATCTGG+TGG | + | chr5_3:28181539-28181558 | Msa0807320:CDS | 50.0% | |
| GCCATCAATGCCCTGACAAA+TGG | - | chr5_3:28182194-28182213 | None:intergenic | 50.0% | |
| !! | TCAGGGCATTGATGGCTCAA+GGG | + | chr5_3:28182198-28182217 | Msa0807320:intron | 50.0% |
| TGATGGCTCAAGGGTTGAGA+AGG | + | chr5_3:28182207-28182226 | Msa0807320:CDS | 50.0% | |
| TCCAGGAGATGTGTCTGCAA+TGG | + | chr5_3:28182270-28182289 | Msa0807320:CDS | 50.0% | |
| ACCATTGCAGACACATCTCC+TGG | - | chr5_3:28182274-28182293 | None:intergenic | 50.0% | |
| GATGTGTCTGCAATGGTTCC+GGG | + | chr5_3:28182277-28182296 | Msa0807320:CDS | 50.0% | |
| TAGTGGAACGTGAGTGAGCG+TGG | - | chr5_3:28174146-28174165 | None:intergenic | 55.0% | |
| !! | CGTTGGAGGTTGGTGTGTGT+GGG | - | chr5_3:28174192-28174211 | None:intergenic | 55.0% |
| ! | AGTGAGTCTGCGAAGTGCCA+TGG | - | chr5_3:28174242-28174261 | None:intergenic | 55.0% |
| GTCGTTGTCGGTGATGCAAG+CGG | + | chr5_3:28174719-28174738 | Msa0807320:CDS | 55.0% | |
| TTGTCGGTGATGCAAGCGGT+TGG | + | chr5_3:28174723-28174742 | Msa0807320:CDS | 55.0% | |
| GGTGATGCAAGCGGTTGGAT+CGG | + | chr5_3:28174728-28174747 | Msa0807320:CDS | 55.0% | |
| GGGTTGGATCCAGCACAATG+GGG | + | chr5_3:28174957-28174976 | Msa0807320:CDS | 55.0% | |
| TTGGATCCAGCACAATGGGG+AGG | + | chr5_3:28174960-28174979 | Msa0807320:CDS | 55.0% | |
| !! | GTAGTGTCGATGACGGACAC+CGG | + | chr5_3:28175313-28175332 | Msa0807320:intron | 55.0% |
| ! | GCACCGACACTGCCAATCAA+AGG | - | chr5_3:28175344-28175363 | None:intergenic | 55.0% |
| ATGGCACTTGATCTCCCCCA+TGG | + | chr5_3:28176763-28176782 | Msa0807320:CDS | 55.0% | |
| CACTTGATCTCCCCCATGGT+GGG | + | chr5_3:28176767-28176786 | Msa0807320:CDS | 55.0% | |
| GTGATAGATGCCCACCATGG+GGG | - | chr5_3:28176780-28176799 | None:intergenic | 55.0% | |
| GAAAGTCGGCACTAGCCACT+AGG | + | chr5_3:28176876-28176895 | Msa0807320:intron | 55.0% | |
| CTCGTGTGAGCATGGAGGAA+AGG | + | chr5_3:28178181-28178200 | Msa0807320:intron | 55.0% | |
| ! | CAGAGGGGAGAATTGGGTTG+TGG | + | chr5_3:28178550-28178569 | Msa0807320:intron | 55.0% |
| ! | GGGAGAATTGGGTTGTGGGA+AGG | + | chr5_3:28178555-28178574 | Msa0807320:intron | 55.0% |
| ! | CAGAGGGGAGAATTGGGTTG+TGG | + | chr5_3:28178550-28178569 | Msa0807320:intron | 55.0% |
| ! | GGGAGAATTGGGTTGTGGGA+AGG | + | chr5_3:28178555-28178574 | Msa0807320:intron | 55.0% |
| ACGGGCATAAGCACTAGCAC+CGG | - | chr5_3:28179798-28179817 | None:intergenic | 55.0% | |
| !! | GTCAGGGCATTGATGGCTCA+AGG | + | chr5_3:28182197-28182216 | Msa0807320:intron | 55.0% |
| TGTCTGCAATGGTTCCGGGA+GGG | + | chr5_3:28182281-28182300 | Msa0807320:CDS | 55.0% | |
| GTTCCGGGAGGGATCAGAAT+GGG | + | chr5_3:28182292-28182311 | Msa0807320:CDS | 55.0% | |
| GTACCCATTCTGATCCCTCC+CGG | - | chr5_3:28182298-28182317 | None:intergenic | 55.0% | |
| GATCTCCGCCGTGAAGTAGA+AGG | + | chr5_3:28182703-28182722 | Msa0807320:CDS | 55.0% | |
| ACGTGAGTGAGCGTGGTTGG+TGG | - | chr5_3:28174139-28174158 | None:intergenic | 60.0% | |
| GGAACGTGAGTGAGCGTGGT+TGG | - | chr5_3:28174142-28174161 | None:intergenic | 60.0% | |
| !! | GCGTTGGAGGTTGGTGTGTG+TGG | - | chr5_3:28174193-28174212 | None:intergenic | 60.0% |
| GCACTTGATCTCCCCCATGG+TGG | + | chr5_3:28176766-28176785 | Msa0807320:CDS | 60.0% | |
| AAGTCACTTCGTGGGCCACG+TGG | + | chr5_3:28180056-28180075 | Msa0807320:CDS | 60.0% | |
| AGTCACTTCGTGGGCCACGT+GGG | + | chr5_3:28180057-28180076 | Msa0807320:CDS | 60.0% | |
| TGAGGACCACCTTGAAGCCC+AGG | - | chr5_3:28181100-28181119 | None:intergenic | 60.0% | |
| GTGTCTGCAATGGTTCCGGG+AGG | + | chr5_3:28182280-28182299 | Msa0807320:CDS | 60.0% | |
| GGTTCCGGGAGGGATCAGAA+TGG | + | chr5_3:28182291-28182310 | Msa0807320:CDS | 60.0% | |
| GTCACTTCGTGGGCCACGTG+GGG | + | chr5_3:28180058-28180077 | Msa0807320:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 28174121 | 28183161 | 28174121 | ID=Msa0807320;Name=Msa0807320 |
| chr5_3 | mRNA | 28174121 | 28183161 | 28174121 | ID=Msa0807320-mRNA-1;Parent=Msa0807320;Name=Msa0807320-mRNA-1;_AED=0.16;_eAED=0.16;_QI=114|1|1|1|0.93|0.87|16|335|507 |
| chr5_3 | exon | 28174121 | 28174297 | 28174121 | ID=Msa0807320-mRNA-1:exon:10027;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28174387 | 28174431 | 28174387 | ID=Msa0807320-mRNA-1:exon:10028;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28174516 | 28174602 | 28174516 | ID=Msa0807320-mRNA-1:exon:10029;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28174687 | 28174808 | 28174687 | ID=Msa0807320-mRNA-1:exon:10030;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28174905 | 28174981 | 28174905 | ID=Msa0807320-mRNA-1:exon:10031;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28176686 | 28176810 | 28176686 | ID=Msa0807320-mRNA-1:exon:10032;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28177779 | 28177871 | 28177779 | ID=Msa0807320-mRNA-1:exon:10033;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28179752 | 28179844 | 28179752 | ID=Msa0807320-mRNA-1:exon:10034;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28179936 | 28180133 | 28179936 | ID=Msa0807320-mRNA-1:exon:10035;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28181055 | 28181159 | 28181055 | ID=Msa0807320-mRNA-1:exon:10036;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28181315 | 28181380 | 28181315 | ID=Msa0807320-mRNA-1:exon:10037;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28181524 | 28181601 | 28181524 | ID=Msa0807320-mRNA-1:exon:10038;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28182202 | 28182313 | 28182202 | ID=Msa0807320-mRNA-1:exon:10039;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28182400 | 28182510 | 28182400 | ID=Msa0807320-mRNA-1:exon:10040;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28182638 | 28182978 | 28182638 | ID=Msa0807320-mRNA-1:exon:10041;Parent=Msa0807320-mRNA-1 |
| chr5_3 | exon | 28183019 | 28183161 | 28183019 | ID=Msa0807320-mRNA-1:exon:10042;Parent=Msa0807320-mRNA-1 |
| chr5_3 | five_prime_UTR | 28174121 | 28174234 | 28174121 | ID=Msa0807320-mRNA-1:five_prime_utr;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28174235 | 28174297 | 28174235 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28174387 | 28174431 | 28174387 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28174516 | 28174602 | 28174516 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28174687 | 28174808 | 28174687 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28174905 | 28174981 | 28174905 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28176686 | 28176810 | 28176686 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28177779 | 28177871 | 28177779 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28179752 | 28179844 | 28179752 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28179936 | 28180133 | 28179936 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28181055 | 28181159 | 28181055 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28181315 | 28181380 | 28181315 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28181524 | 28181601 | 28181524 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28182202 | 28182313 | 28182202 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28182400 | 28182510 | 28182400 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | CDS | 28182638 | 28182786 | 28182638 | ID=Msa0807320-mRNA-1:cds;Parent=Msa0807320-mRNA-1 |
| chr5_3 | three_prime_UTR | 28182787 | 28182978 | 28182787 | ID=Msa0807320-mRNA-1:three_prime_utr;Parent=Msa0807320-mRNA-1 |
| chr5_3 | three_prime_UTR | 28183019 | 28183161 | 28183019 | ID=Msa0807320-mRNA-1:three_prime_utr;Parent=Msa0807320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
